GJ22532, maker-scaffold141_size315519-snap-gene-2.21 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000005166 (supercontig:LSalAtl2s:LSalAtl2s272:98980:103362:-1 gene:EMLSAG00000005166 transcript:EMLSAT00000005166 description:"maker-LSalAtl2s272-augustus-gene-1.14") HSP 1 Score: 56.6102 bits (135), Expect = 1.977e-11 Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 0
Query: 21 SSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPS 76
S GTC + +C +RGG+ G+CA+G+G CC I CGGT + NCTY+ S F S
Sbjct: 362 SKNGTCYTADECETRGGTASGSCASGYGVCCX-ITLSCGGTSSDNCTYIEQSSFTS 416
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000010824 (supercontig:LSalAtl2s:LSalAtl2s719:60764:248752:-1 gene:EMLSAG00000010824 transcript:EMLSAT00000010824 description:"maker-LSalAtl2s719-augustus-gene-2.10") HSP 1 Score: 56.225 bits (134), Expect = 2.252e-11 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPS 76
LF+ + F +N+ C ++S ++ GTC S +DC GG+G G CA GFG CC F CG + N TY +N G+PS
Sbjct: 87 LFTIVSF--KNEECGSKSG-NNNGTCYSKSDCTKMGGTGSGTCAHGFGVCCIF-TKSCGYSTKNNGTYFQNVGYPS 158
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000011908 (supercontig:LSalAtl2s:LSalAtl2s83:643787:645943:-1 gene:EMLSAG00000011908 transcript:EMLSAT00000011908 description:"maker-LSalAtl2s83-augustus-gene-6.23") HSP 1 Score: 55.4546 bits (132), Expect = 4.554e-11 Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0
Query: 5 MLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFP 75
+++ RNDP T +T+ GTC +T +C +RGG+ G+CA+G G CC F + CG T +NCTY P
Sbjct: 91 IIYRFRNDPXSTGDNTN--GTCYTTDECTARGGTPSGDCASGXGVCCVFTFS-CGQTSAENCTYFIGQNVP 158
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000012914 (supercontig:LSalAtl2s:LSalAtl2s981:97107:102445:1 gene:EMLSAG00000012914 transcript:EMLSAT00000012914 description:"augustus_masked-LSalAtl2s981-processed-gene-1.0") HSP 1 Score: 55.0694 bits (131), Expect = 5.821e-11 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSG 73
+F + F RND C S S GTC ++ +C SRGG+ G+CA+GFG CC F + C G +NCTY + G
Sbjct: 40 VFQVIRF--RNDAC---SGGSKNGTCYTSAECESRGGTNGGSCASGFGVCCTF-TSRCSGMSRENCTYFESVG 106
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000000066 (supercontig:LSalAtl2s:LSalAtl2s100:472529:474152:-1 gene:EMLSAG00000000066 transcript:EMLSAT00000000066 description:"maker-LSalAtl2s100-augustus-gene-4.21") HSP 1 Score: 54.299 bits (129), Expect = 1.123e-10 Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0
Query: 21 SSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRN 71
S GTC ++ +C ++GG G CA+G+G CC I GCGGT ++NCTY+
Sbjct: 50 SKNGTCYTSEECEAKGGLAQGTCASGYGVCC-IITLGCGGTSSENCTYIEQ 99
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000000642 (supercontig:LSalAtl2s:LSalAtl2s10:144553:177864:1 gene:EMLSAG00000000642 transcript:EMLSAT00000000642 description:"augustus_masked-LSalAtl2s10-processed-gene-1.2") HSP 1 Score: 53.5286 bits (127), Expect = 2.064e-10 Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 21 SSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPS 76
S GTCLS C + G G CA+GFGTCC F CG V +N TY+ + +PS
Sbjct: 46 SRNGTCLSAQKCTTNSGIPSGKCASGFGTCCVFETQTCGSKVLRNMTYITSPDYPS 101
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000004323 (supercontig:LSalAtl2s:LSalAtl2s227:164788:172918:-1 gene:EMLSAG00000004323 transcript:EMLSAT00000004323 description:"maker-LSalAtl2s227-augustus-gene-1.21") HSP 1 Score: 53.5286 bits (127), Expect = 2.303e-10 Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPSA 77
LF+ + F ND C + + GTCL +CAS+ G+ G+CA+G+G CC F++ CG + NCTY+ + SA
Sbjct: 36 LFNVVTF--PNDVC--AGNGARNGTCLPANECASQQGAASGSCASGYGVCCVFVIQ-CGSMSSANCTYIEQTSISSA 107
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000012256 (supercontig:LSalAtl2s:LSalAtl2s895:139847:141906:1 gene:EMLSAG00000012256 transcript:EMLSAT00000012256 description:"maker-LSalAtl2s895-augustus-gene-1.27") HSP 1 Score: 51.9878 bits (123), Expect = 7.190e-10 Identity = 29/50 (58.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query: 24 GTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSG 73
GTCL+ DC SR GS G CAAG+GTCC I GCGG + N TY +SG
Sbjct: 65 GTCLTANDCQSRNGSPGGTCAAGYGTCC-IISLGCGGMSSSNNTYFTSSG 113
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000002437 (supercontig:LSalAtl2s:LSalAtl2s1466:32261:38393:1 gene:EMLSAG00000002437 transcript:EMLSAT00000002437 description:"maker-LSalAtl2s1466-augustus-gene-0.17") HSP 1 Score: 50.8322 bits (120), Expect = 2.139e-9 Identity = 27/58 (46.55%), Postives = 31/58 (53.45%), Query Frame = 0
Query: 11 NDPCITQSDTSS----RGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQ 64
N C S TS GTC + +C S GG DGNCA GFG CC V CGG +N+
Sbjct: 35 NKQCTXASSTSPSMNRHGTCFTANECESMGGFVDGNCAFGFGVCCVLRVRECGGRINK 92
BLAST of GJ22532 vs. L. salmonis genes
Match: EMLSAG00000002101 (supercontig:LSalAtl2s:LSalAtl2s1395:30727:32553:-1 gene:EMLSAG00000002101 transcript:EMLSAT00000002101 description:"maker-LSalAtl2s1395-augustus-gene-0.19") HSP 1 Score: 47.7506 bits (112), Expect = 2.524e-8 Identity = 33/77 (42.86%), Postives = 42/77 (54.55%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPSA 77
LF+ + F +N PC RGTC + +C SRGGS G CA G+G CC F C ++N TYL N+ PSA
Sbjct: 42 LFNIVRF--QNKPC---GAGPLRGTCYTDKECNSRGGSNGGPCAGGYGICCTF-TPECXSQSSENLTYLTNNN-PSA 111
BLAST of GJ22532 vs. nr
Match: gi|1325334262|ref|XP_023348958.1| (uncharacterized protein LOC111717712 [Eurytemora affinis]) HSP 1 Score: 73.1738 bits (178), Expect = 2.786e-13 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 0
Query: 6 LFGKRNDP---CIT-QSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPSADT 79
LF N P C+T S ++ GTC+ST++C SR GS G CAAGFG CC V+ CG TVN N TY++N G+PS T
Sbjct: 45 LFAIVNFPNLRCVTSNSGSTLYGTCISTSECTSRSGSAAGTCAAGFGVCCYLAVSTCGSTVNYNNTYIQNPGYPSTYT 122
BLAST of GJ22532 vs. nr
Match: gi|1325273897|ref|XP_023321599.1| (uncharacterized protein LOC111696274 [Eurytemora affinis]) HSP 1 Score: 70.4774 bits (171), Expect = 2.442e-12 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPS 76
LFS + F N C + S + +RGTCL++++C S+GG+ G CAAGFG CC F + C TV+ N +Y+ N GFPS
Sbjct: 47 LFSVVNF--PNLECNSLSSSFARGTCLASSECQSKGGTTSGTCAAGFGVCCLFTTSACSSTVSNNVSYITNPGFPS 120
BLAST of GJ22532 vs. nr
Match: gi|939232680|ref|XP_014249299.1| (uncharacterized protein LOC106666516 [Cimex lectularius]) HSP 1 Score: 68.5514 bits (166), Expect = 1.116e-11 Identity = 37/77 (48.05%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPSA 77
LF+ + FG ND C Q+ T GTC+++ +C++RGG +G CA FG CC F+ T CG T +QNCTY N G+P+A
Sbjct: 83 LFTVVQFG--NDGC--QASTGDNGTCMTSAECSARGGVANGPCAKTFGVCCLFMST-CGQTTSQNCTYFVNPGYPTA 154
BLAST of GJ22532 vs. nr
Match: gi|936689662|ref|XP_014222809.1| (uncharacterized protein LOC106649735 [Trichogramma pretiosum]) HSP 1 Score: 67.3958 bits (163), Expect = 2.528e-11 Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 0
Query: 14 CITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPS 76
CI+ SD RG C++T DC R G G+CA GFGTCC FI T C G V N TY+ N GFP+
Sbjct: 66 CIS-SDKRRRGVCMNTYDCQERRGHASGSCALGFGTCCIFI-TDCSGEVQNNMTYITNPGFPN 126
BLAST of GJ22532 vs. nr
Match: gi|1325303242|ref|XP_023333196.1| (uncharacterized protein LOC111705003 isoform X1 [Eurytemora affinis]) HSP 1 Score: 67.0106 bits (162), Expect = 3.906e-11 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPSADTT 80
+FS + F ND C++ D S+ GTCLS +C RGG+ +G+CA+GFG CC + CGG + N T ++N G+PS T
Sbjct: 84 VFSVVSF--PNDACLSVLD-SANGTCLSPLECNQRGGTAEGSCASGFGICCVLRLESCGGQILNNVTQVQNPGYPSKYKT 160
BLAST of GJ22532 vs. nr
Match: gi|1325334814|ref|XP_023349224.1| (uncharacterized protein LOC111717988 isoform X2 [Eurytemora affinis]) HSP 1 Score: 65.855 bits (159), Expect = 8.318e-11 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0
Query: 6 LFGKRNDP---CITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSG 73
LF N P C T++ +++ GTC+ST++C SR GS G CAAGFG CC V+ CG +++ N TY++N G
Sbjct: 37 LFAVVNFPNLKCTTKTGSTTYGTCISTSECTSRSGSASGTCAAGFGVCCYMAVSTCGSSLSYNNTYIQNPG 107
BLAST of GJ22532 vs. nr
Match: gi|1325334812|ref|XP_023349222.1| (uncharacterized protein LOC111717988 isoform X1 [Eurytemora affinis]) HSP 1 Score: 65.855 bits (159), Expect = 9.645e-11 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0
Query: 6 LFGKRNDP---CITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSG 73
LF N P C T++ +++ GTC+ST++C SR GS G CAAGFG CC V+ CG +++ N TY++N G
Sbjct: 55 LFAVVNFPNLKCTTKTGSTTYGTCISTSECTSRSGSASGTCAAGFGVCCYMAVSTCGSSLSYNNTYIQNPG 125
BLAST of GJ22532 vs. nr
Match: gi|1325311645|ref|XP_023337449.1| (uncharacterized protein LOC111708347 [Eurytemora affinis]) HSP 1 Score: 65.4698 bits (158), Expect = 1.009e-10 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 0
Query: 21 SSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPSADT 79
++ GTC+ST++C SR GS G CAAGFG CC V+ CG ++ N TY++N G+PS+ T
Sbjct: 98 TTYGTCISTSECTSRSGSASGTCAAGFGVCCYMAVSVCGSSLAYNNTYIQNPGYPSSFT 156
BLAST of GJ22532 vs. nr
Match: gi|1022763300|gb|KZS08912.1| (Uncharacterized protein APZ42_027001 [Daphnia magna]) HSP 1 Score: 65.855 bits (159), Expect = 1.109e-10 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPSADTT 80
LFS + F N C+ + S GTCL+T +C+++GG+ G CA+GFG CC + CG T + N TY +N+GF SA TT
Sbjct: 50 LFSIVRF--PNSLCL--ASNSYNGTCLTTAECSAKGGTASGTCASGFGVCCVLTIQTCGATTSLNNTYWQNNGFSSAYTT 125
BLAST of GJ22532 vs. nr
Match: gi|1325319228|ref|XP_023341394.1| (uncharacterized protein LOC111711301 [Eurytemora affinis]) HSP 1 Score: 65.4698 bits (158), Expect = 1.252e-10 Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0
Query: 1 LFSSMLFGKRNDPCITQSDTSSRGTCLSTTDCASRGGSGDGNCAAGFGTCCAFIVTGCGGTVNQNCTYLRNSGFPS 76
LF+ + F +ND C++ T+ GTC S+ +C S+GG+ G CA+GFG CC F T CGG+ N N TY +NSG+PS
Sbjct: 138 LFTIVSF--KNDACVSTGGTN--GTCYSSNECTSKGGASAGTCASGFGVCCLFTAT-CGGSTNVNGTYFQNSGYPS 208 The following BLAST results are available for this feature:
BLAST of GJ22532 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 23
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BLAST of GJ22532 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of GJ22532 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold141_size315519:230298..232327- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold141_size315519-snap-gene-2.21 ID=maker-scaffold141_size315519-snap-gene-2.21|Name=GJ22532|organism=Tigriopus kingsejongensis|type=gene|length=2030bp|location=Sequence derived from alignment at scaffold141_size315519:230298..232327- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GJ22532' has the following synonyms
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