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Associated RNAi Experiments
Homology
BLAST of ---NA--- vs. L. salmonis genes
Match: EMLSAG00000006619 (supercontig:LSalAtl2s:LSalAtl2s364:511246:511863:1 gene:EMLSAG00000006619 transcript:EMLSAT00000006619 description:"augustus_masked-LSalAtl2s364-processed-gene-5.9") HSP 1 Score: 72.7886 bits (177), Expect = 1.024e-15 Identity = 33/81 (40.74%), Postives = 51/81 (62.96%), Query Frame = 0
Query: 178 PARPAFGGNAEPVISPGQALDLLEHLESAIKHYATRLESAGNCDMKEFRECTCVSPAVFTKDGRGNCNLGVTKPDKQVWCY 258
P F G++ P + P LD L+++ +++Y T +CD+ ++ CTC PA +++DGRGNCN+G TKPD +VWCY
Sbjct: 95 PMDTTFRGSS-PSLDPVVGLDHLDYIAELLENYPT---CGDSCDVSRWKGCTCAYPATYSEDGRGNCNVGSTKPDLKVWCY 171
The following BLAST results are available for this feature:
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold143_size313727 | supercontig | scaffold143_size313727:100514..104932 - |
Analyses
This gene is derived from or has results from the following analyses
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold143_size313727:100514..104932- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >maker-scaffold143_size313727-snap-gene-1.24 ID=maker-scaffold143_size313727-snap-gene-1.24|Name=---NA---|organism=Tigriopus kingsejongensis|type=gene|length=4419bp|location=Sequence derived from alignment at scaffold143_size313727:100514..104932- (Tigriopus kingsejongensis)
ACCATATCCTGCATAATGAAGGCCATCGTCTTTTGCCTCATGTTCGTGGC
CGCCATGGCGCGCTCCTACCCTTCGGACGCGTCCAATGACGACGAGACCA
AGTCGTATGAATCCTCTGGAAACGGCGGTTCGGGTAACTCTGGCACCACC
TCGACCACCGTGGGCGGCGGTCTCGACTTCAGCTTGAACACCATGGAGAT
GCTGGAACGGGCTGCGGGTCACGGGCAGAGCAACATTGCTGCCGGCAGCG
GAGGAAGTGGATCGTCTAGCCAGCCTGATCCTCGTTTCGGAGGCAATCGA
CCCGTCTATCCTGGTTTTCCCGGAGGTTCAGGAGGATCGGCTGGCTTCCT
CGGTGGGCAAGGGGGTTCTTCAGGATTCTCGGGCGCGCAAGGCGGCTTCT
CGGGACCACATGGTGGTTCTGCCGGCTATTCTGGGCCCCAAGGTGGTTCC
GCTGGCTTCTCTGGGCCCCAAGGTGGTTCCGCTGGCTTCTCTGGTGCTCA
CGGTGGGGCCGGTGGCTTCTCCGGAGCCCAAGGAGGTTCTGCCGCCCATC
AGACCTCTCCTTTGCCTCAGCCCCATCCTGCCCGACCCGCTTTTGGTGGC
AACGCCGAGCCCGTTATTAGCCCTGGACAAGCGTTGGACCTCTTGGAACA
TCTGGAAAGTGCCATCAAACACTATGCCACACGCCTGGAGTCTGCTGGCA
ACTGCGACATGAAGGAATTCCGGGAATGTACCTGCGTCAGTCCTGCTGTC
TTCACCAAGGATGGGCGTGGCAACTGTAATCTGGGCGTGACCAAGCCCGA
CAAGCAGGTGTGGTGTTACGTAAGCCAAGATTATGGACATCCCAAGGCCG
TTTGCCCTGATGCCACGGCCAGTCAAAACGCCCCCGGCCAATACTGGTCC
CGGATGGCCTGCATCACGGGATAGAACCGAATGGTGGTTTTAATTTTGTT
TGACAAAATAAATATATGATAACCAGTATATATGCTTGCTTTGATTTCAA
TTTGCGCGAGTGGCAAGCGACATTGGGTTTGGAAGAACTCGAAATGGTAC
GGAAAATAATCCCGGATTAGCGTTCGGAAGGCCCAGATTCAATTTTGCTT
GAATTGCATTTGGGCGATGCGCACAGGTGGGGGGCAGGAATGCTTGCATT
GGCAATAATGGAACATTGTATGCAATAGAGGATGCAACTCGCTAATCCAG
AAATTTATTGTTGGACAGCGAATTTGTCGAAGACTGTTTTCGGACTCTGA
ATAGTGACAAAGACTCGCGGACGGAAAGTGAAAGTTCCAAGATGAGGGAT
TAAGGAAAGCTTGTTAAATTGCCCCTCTTTTATAGTCTGAAATCCTTCCA
TTGTCGACTGTGTGCGGGAAATACGTTATGCATGTACATGTACACAAATA
AATAAATTTGACTTGAGATTCACAAGCTGGAAGCAACCATAGAACTATGA
AATAAAAAAAATAGTAGGCATGTAGCATTTCTGTCGCGAATCATCATTCG
ACCATGCCAAAACGCATTCATTGATTTAGGTGACAAGGAGAACGTTTAGG
TTGTCGGTTGTAATTGTGCGGTATAAAACAAGCTTGATTGTAAAGTGGCC
TATGGTGAAATAGGAGAATTAATTGTCGATGCAGATGAGTACATCGTCCA
TTCAAATTTAAACTGATGTAATGTCGACCTTGAACCCTCAACCAGCTTTT
GATACGAGGAATACTTAAGTAAAATTATGGTTTGTCTATATACAGATTAG
AAAAGTACGTAGAACAAACGCAGCTCTCGAGATACCTCCCATTTTTAAAG
AGCTGGATGAATGCATTCCATAAATAATCGTTCATGAGTCCTTCGTCTGA
TGACATCTACATTTATTCCTCCCATTTTTAAAGAGCTGGATGAATGCATT
CCATAAATAATCGTTCATGAGTCCTTCGTCTGATGACATCTACATTTATT
CCTCCGAGTCCCAAATGTACTGTACAAGTGTTTTTACTTAGTATAAATGA
ACCTATGTCAAGTCTATTGAACCGTTCACATCTATAAACCTGCTAGCTGT
TGATGATATCGAAAAGGCTTGTAAAGCCTTACCTATATTTGCCTGATTAG
GGTTTATAAAATGTAGTCCAATTACGCATGTTCTCTGTTTCACGGTCCCA
GGTACACGTTAAGCGGGTAAATATTTCAGCCCAAACGTACGGCTTTTGGC
CACAACCCTAGCTAACTAAACGCTTTACTACCTGTTTTCACATAACAAAC
CAATAACTACAATCTGTCCCCCTTTTTTGGCCGCACATTGCGTGGGCTTT
TGGGCTGCGGCTTCATGGTTTCTAAGATGAGTAAAGACATTTTTTAGTTA
CATGAAAAAATGGGCTCTATGGTATTGCAATGGCATATCAATGAATTATC
CCTATTGTCTTGCTTTTTCATGGCTGTGCGTATGTGTGTGAGGTGGAGAG
CATGCTAATGTGATACAATTTTAAAGACAAGGAGCTGAACATACGTACAG
AGAGTACGTGAATACAAGGCAATGTAAATAACACTTCGGTTCGTTCAAAA
TTTGTCTCTCAGCCAGGAAACAGGTGTGTAATATTCATTCAAATTCGTTT
AATCGCGAATTGATATCGGAAAATATATCTAATGTGATTTTTGAAGTTGG
TAGATTTCCCAATGCCAAAGGCACTTCAGGTAATTGAACGCTCTTAGAAA
TGCTAATCCGGATCATTTCGGCTCGCTAGGAGAATCATTGCTTTTGTAAT
TACATTAGGACTTGCCGACCTATCGGTCACAGTGGGTCAGTTTGCTCATG
TTCCAGTCTTCCCGTGATCTCTGCAACTATTTCTACGTGTGTATTTGTAT
GTATTAGTCCTGTTTTAACATGAAAATAATGCCCGGAAAGCAGCACTTCA
CCACAAGAGCTGGTCAATATCAATCGGGCATTGAATCAGCTATTGAACGA
GGGAAGTTGGCGTAGCGTAGTGGTTAGAGTATCGCTCTGAGAATGTCTCT
ACTGCAGGCTCGTCTGGTGTCCTGGGTTTGATTCCCGGCATACCTTCAGT
CGACCCATCCCTAGCTCAAGCTCATAGGGCGAATACCTGAGGAATTTGAA
GTCACCTTTGAGTCACCTGGGCCAACCGAGTCCGGAGCCTCTGGAATTAG
CACCTCCAAAGATTGGTGACCAAGTGCAGACCCCTAGAAGTGAGAGAACT
AGTGTGCCGCACTCCAAAGGTGAGTGAGTTCCTGGTCGGTCTGGACCGGC
ATAAATGAGTGATCCTGTGGTCGAGGGTAAGGTAACAATTCATTATAAAT
TTGTAACGGAACATATGGTTGACCAAATCTCAATAAAGGTTTCTTCGCCA
CAATCAGCAATAATCTGGAGCCAACATTACTAAACGAAGGAACAGGCGAG
ATAAATTTGCTAAATCATGAACAAATGGAATTTTCCGAAACATCATGAAA
AAGACAAAAATAGTGCAATAACATAACAGAAATTTTCCTTATTGGATAAA
TGAGGCCTGATCTTGGCATTGAATTGGCTACGAGTACGTTCGAGGTAGTG
CTTCCAAAATCATTGCTAGTTTAGATTAGTGATTGTCGATGATTCTTGAT
AAAGTTAGTCGATCGAATATCGACGATTTTGGGAAAAATGAGCTACTAAT
ATTCATAAATCCTCAAAAAATTACACCTTTTAGGAAGTGGGCATCGAAAA
AAAGTACAGTGCATTTGACTCGGCCTCGAAAAAAAGTGGCGGAGAATGCC
AAAAAACAAAAGGTACCCATATAAGAAGGAAATTGAATCTGGGTTGTAAT
CTCACCCATATCCCTTTGCCATGATAGGCACTAGCCTCTTGTGGAAGGCC
GAAAAAAGAGAATTCTGTCCTTTTGGTCTAAAAGTCCTTGGCTGCCATTT
GAATTGAAGGCAGTCTAACCATAATTAAGGTATGCGGATACCTTGACACC
AAATGGTTACGCACAGTAGCCTCGCTGTACTACTCGCCCATTTGATTACT
ATCTTTCGTAGTACTAGACCGAGGTCATAGGACCATAGTGATAACGCTTT
TGATGGCTCCAGTGAGTTACTCTTTAATATTTAGAAATGAGTAGTCGTAG
CGTTCAACTAAAATATAATATTACAACAACAGCTGATGTCCCAAATGGAT
GTGCTTGGACTCAATGGGATAAATCCCCCACCTTGCCCTTCAAGATTGTC
TTCGGTGGGGTCCAACAAAGCAAAGGATTCTGAACCCTTGGGAGGTGGTG
GCAGATTCAACTCCACATTCCTGGATTCGGGCACATTGGAGACACTTTGC
AAGGCCTTCTCCATGTTATCCCCCGTCTTTTCCAGCGTGTCGTTTGCTGC
CTTAAGATCAACCTCCACTCCGCCATGGAAATCCTCAGGAACCAGAGTCT
CTTGACCAATGACATTTGA back to top
Synonyms
The feature '---NA---' has the following synonyms
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