dna repair and recombination protein rad54-like, maker-scaffold1491_size38540-snap-gene-0.12 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000000885 (supercontig:LSalAtl2s:LSalAtl2s1153:27270:31467:1 gene:EMLSAG00000000885 transcript:EMLSAT00000000885 description:"snap_masked-LSalAtl2s1153-processed-gene-0.34") HSP 1 Score: 1111.67 bits (2874), Expect = 0.000e+0 Identity = 553/755 (73.25%), Postives = 621/755 (82.25%), Query Frame = 0 Query: 11 RRSAAPSAVAKRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLK-ADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQIQVV 764 RR APS ++KR + S+P S + KR +DSD + R PL NI N T S + HERLIR +NKPFK+PI NY S GR LGIRRSG R LHDP +NALVLY PPE+SEH+KL S + PV VVVDPILT+VLRPHQREGVKFMYDCVTG RIP+ +GCIMA EMGLGKTLQCITLMWTLLKQSP+C P IEKAIVV PSSLVKNW NEI+KWLGGRV L +D GSK ID++L+GF+NT+GRRPVNPILIISYETFRLH+ VL EVGLVLCDEGHRLKNSEN TYQ+LM +K++RRVLLSGTPIQNDLLEYFSL+HFVNEG+LGTA EFRK+FENPILRGRDADA DD KKG +KL E+A VVNRCIIRRTQALLSKYLPVKYEQVIC +LT LQ+ IY+SF SDT+R++LKGSE K+ S L AITSLKKLVNHPDLI+ C++ EGFE + YYP Y P+ RL PA SGKLS+LDCLLAFVK ++DKVVLVSNYTQ LDLFERLC+LR+Y +VRLDGSM+IKKRAKVVD+FNDP SPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYR LAVGTIEEKIFQRQAHKKALSSCVVD+EE+VE+HFSV DL++LFKLE + SDTHDKFKCRRCV+GIQVK P SDCNS+LS WHH TSKKGL DMALKQ W+AG+TFAFHHKSH+QI+V+ Sbjct: 2 RRCFAPSQISKR-----NDSSPPQPQESSKRRKR-----NDSDA----TKTRNPLNNISNTTTTSPSSSA-----HERLIRSFVNKPFKIPIANYAGSSSGRFLGIRRSGNRVALHDPDTENALVLYTPPEISEHEKLSLGPSAELPVHVVVDPILTKVLRPHQREGVKFMYDCVTGIRIPENYGCIMAXEMGLGKTLQCITLMWTLLKQSPECKPTIEKAIVVCPSSLVKNWYNEISKWLGGRVQPLAMDGGSKDSIDKDLSGFINTYGRRPVNPILIISYETFRLHSSVLQSGEVGLVLCDEGHRLKNSENLTYQSLMGIKSKRRVLLSGTPIQNDLLEYFSLIHFVNEGLLGTAQEFRKKFENPILRGRDADATDDDHKKGVQKLQEMAEVVNRCIIRRTQALLSKYLPVKYEQVICVQLTDLQKDIYQSFCRSDTIRKNLKGSE--KVGFSPLRAITSLKKLVNHPDLIYNVCKEGHEGFEKSLXYYPANYXPNG-RLXPAYSGKLSVLDCLLAFVKNCSTDKVVLVSNYTQMLDLFERLCSLRNYGFVRLDGSMSIKKRAKVVDKFNDPTSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRFLAVGTIEEKIFQRQAHKKALSSCVVDQEENVEKHFSVTDLKELFKLEVESPSDTHDKFKCRRCVNGIQVKEPPDGSDCNSDLSAWHHCTSKKGLPDMALKQSWDAGITFAFHHKSHDQIKVL 734
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000010347 (supercontig:LSalAtl2s:LSalAtl2s685:51126:60163:-1 gene:EMLSAG00000010347 transcript:EMLSAT00000010347 description:"maker-LSalAtl2s685-augustus-gene-0.11") HSP 1 Score: 259.225 bits (661), Expect = 4.050e-73 Identity = 181/615 (29.43%), Postives = 297/615 (48.29%), Query Frame = 0 Query: 159 VVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDT---HGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEIN--------------KWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLH---------------------------QSEV-----GLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENA------FQYYPEAYNPSKQRLQPALSGKLSI-------------LDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALR------------------SYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFK 687 V + P L ++++PHQ G++F+YD + +GCI+A MGLGKT+Q + L+ +P ++ +++ P + ++NW NE N K + R + I + + ++D+ N + + +L++ YE +R A QS + L++CDEGHR+KNS AL +K RRRV+L+G P+QN+L+EY+ +V FV LGT +EF FE PI G+ AD+L D++ + L + + + RR+ +L+K LP K E +I ++TP Q +Y +F+ + L G+ V ++ L A K+ NHPD+++ + R+ NA F + A NP +GK+S +D + ++ V S +TL +R+ +Y RLDGS + +R K++ FN +S + +F++S+KAG G+NLIGANR+V+FD WNP +D QA+ RV+R GQKK FIYRL+ +E I+ RQ +K+ +S+ +VD E + E F +++ L + Sbjct: 986 VFLIPQLEKIVKPHQIGGIRFLYDNIIESLSNYNSIGYGCILAHSMGLGKTIQVVCFTDIFLRYTPG-----KRVLIIVPINTIQNWLNEYNQWIPSSSSSTYSWSKEIEPRDYEVFILNDNCKNLDQRGRLIENWYSK---GGVLLMGYELYRQLANKKPRKKRKRKGPECIDIEEEDKEKVTLDSVQSALVDPGPDLIICDEGHRIKNSHASISSALKAVKTRRRVVLTGYPLQNNLMEYWCMVDFVRPNFLGTKTEFANMFERPIQNGQCADSLTKDVRLMKHRAHVLHNQLKGFVQRRSHVVLTKSLPPKEEHIIMLRMTPFQRYLYTAFM------KDLLGANSV---TNPLKAFAVALKIYNHPDVLYHFLKKRE--INNAMDLDFDFDEFGVAINPK--------NGKVSFKKEEIDYDWINDSMDNYETGLIENSPKMCVFFSLLRKTLQENDRMLLFSQSLLSLNLIEEFLKKEEPELKYFRLDGSTSGLEREKLISTFNKDDSIK-LFLISTKAGSLGINLIGANRVVVFDASWNPCHDSQAVCRVYRYGQKKTSFIYRLIVDNCLERTIYDRQINKQGMSNRIVD-ELNPELRFQTKEIQTLLR 1571
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000011974 (supercontig:LSalAtl2s:LSalAtl2s851:141371:144613:-1 gene:EMLSAG00000011974 transcript:EMLSAT00000011974 description:"maker-LSalAtl2s851-augustus-gene-0.6") HSP 1 Score: 253.062 bits (645), Expect = 8.379e-72 Identity = 162/509 (31.83%), Postives = 259/509 (50.88%), Query Frame = 0 Query: 194 GCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRN--LNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKY--LPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFN-DPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTH 697 G I+ DEMGLGKT+Q + + +L S P +++ P++L+ W E + W + DSGS R ++ G IL+ SY + ++ + V EGH+++ + A+ + R++LSG+P+QN+L E +SL F+ G LGT F ++F PI +G ++A + + L + ++RR ++ + + LP K EQ++ C+LT Q S Y S++ S ++ +G + A + +L+K+ NHPDL K G SGK+ +++ LL K +V+L + Q L L E R Y Y++LDG+ ++ R ++D+FN DPN F+F+L++K GG G+NL+GANR+V+FDPDWNP+ D QA R WR GQK + IYRL+ GTIEEKI+ RQ K+ L + V+ ++ +R F DL +LF L++ + T Sbjct: 282 GGILGDEMGLGKTIQILAYLASL-SYSIGLGP----TLIICPATLMHQWVKESHAWWPAFRIAVLHDSGSYQGKSRKALISSIFEAKG------ILVTSYSGVVSFKEPINSLKWNYVXLXEGHKIRKPDALXTXAVKSIPTCHRLILSGSPLQNNLKELWSLFDFIYPGKLGTLPVFIQQFSVPITQGGYSNASRVAVATAYKCATVLRDTITPYLLRRMKSDVKSHINLPEKSEQILFCRLTDEQRSCYRSYLDSSDIQNIFEGKSKI------FAGLINLRKICNHPDLYANKNEVSKYGHWRK-------------------SGKMIVVEALLKLWKKQ-EHRVLLFTQSRQLLSLLEIFIQRRQYSYLKLDGTTSVSSRQSLIDKFNEDPNI--FVFILTTKVGGLGVNLVGANRVVIFDPDWNPSTDTQARERAWRIGQKNQVTIYRLITSGTIEEKIYHRQIFKQFLVNRVL-KDPKQKRFFKSNDLYELFTLKEGKSDRTE 750
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000007056 (supercontig:LSalAtl2s:LSalAtl2s3:1778107:1780625:-1 gene:EMLSAG00000007056 transcript:EMLSAT00000007056 description:"augustus_masked-LSalAtl2s3-processed-gene-17.6") HSP 1 Score: 241.891 bits (616), Expect = 2.653e-70 Identity = 137/344 (39.83%), Postives = 204/344 (59.30%), Query Frame = 0 Query: 367 SEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASD--THDKFKCRRCVSG 708 ++F + FE PILR + ++ +D + G K+ EL+S+ + I+RRTQ ++S +LP K E V+ C L+PLQ+ +Y+ + D + SE V I +L+K+ N LI + D + + +K R K+ I+ +L +K ST +K+V+VS T+ LD+ E LC+ +++ +RLDGS KR +V++FN+ S +F+ +LSSKAGG GLNLIGA+R++M+D DWNP++D AMARVWRDGQ K F+YRL+ GTIEEKIFQRQ K+ L VVD + + HF+ +L+DLF L +D TH C C +G Sbjct: 261 NDFVRNFETPILRSKQPNSSEEDAEVGNLKIEELSSITEKFILRRTQDVISSFLPPKTENVLFCGLSPLQKELYKKVI--DQIFCEGFNSECV------FTTIITLRKICNDTSLILGNESD--------------SNSENKDR-----GSKIEIVSSMLNTLK-STGEKIVIVSISTKVLDVLEILCSKFNFKSLRLDGSTPGSKRQSIVNRFNNKFSDDFVLLLSSKAGGTGLNLIGASRIIMYDLDWNPSHDIXAMARVWRDGQTKPVFVYRLITTGTIEEKIFQRQVTKQGLGDGVVDAKTAI-NHFTQEELKDLFSLTSGLENDCETHVLLSCESCHNG 575 HSP 2 Score: 125.561 bits (314), Expect = 3.712e-30 Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 0 Query: 159 VVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSP-DCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYE 292 V VD LT+VLR HQ++G+ F+Y C+ G R P +G I+ADEMGLGKTLQ I+L++TLLKQ P + P I++ +++APSSL+ NW E NKWLG + + S S I L + P P++IISYE Sbjct: 133 VCVDSRLTKVLRSHQKDGILFIYKCLMGYRTPGYYGAILADEMGLGKTLQTISLVYTLLKQGPWNGMPEIKRCLILAPSSLLGNWKEEFNKWLGPERLKVYVGESSSSKITEYL--------KYPNEPVVIISYE 259
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000001280 (supercontig:LSalAtl2s:LSalAtl2s1211:177823:184435:1 gene:EMLSAG00000001280 transcript:EMLSAT00000001280 description:"augustus_masked-LSalAtl2s1211-processed-gene-1.3") HSP 1 Score: 222.631 bits (566), Expect = 5.590e-61 Identity = 170/544 (31.25%), Postives = 271/544 (49.82%), Query Frame = 0 Query: 166 TRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLM----WTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLK--GSEGVKMTSSS--LAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKA-------STSDKVVLVSNYTQTLDLFERLC---ALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKN 691 T +LR +QR GV ++ HG I+ D+MGLGKTLQ I ++ + + Q+ + P ++V+ P +L +W EI K+ G+ + +G+ ++R+ TF + N ILI SY+ R + L + + ++ DEGH +KN++ +T A+ L + R++LSGTPIQN +LE +SL F+ G LG+ EF +F PI+ R++ D + G L + ++RR + + K LP K Q C L+PLQ +YE + T+++ L +K TS S A+ L+K+ NHP L+ ++ + S PAL K +L+C + V+ ++ + ++ +D+ E + S Y+RLDGS+ R ++V +FN+ S + I +LS+ GG GLNL GA+ ++ + DWNP D QAM R R GQKK +YRL+ TIEEKI Q K ++ V+ E + + DLF LE+N Sbjct: 1127 TELLRSYQRSGVNWL----AFLNRYKLHG-ILCDDMGLGKTLQSICILAGDHYNRINQNMENIP----SLVICPPTLRWHWKEEILKFTKGKFLSPLLYNGNT--VNRSST---RTFIEK--NNILITSYDIVRKDIEFLKEIKWNYIILDEGHIIKNAKAKTTIAIKSLSSNHRLILSGTPIQNSVLEIWSLFDFLMPGYLGSEREFSSKFSKPIIASRESKCSKRDKEAGALATESLHRQILPFVLRRMKEDVLKDLPPKITQDYYCDLSPLQIRLYEEY----TLKQKLDDLDXNSIKPTSKSHIFQALQYLRKVCNHPKLVSNELS------------VTQSQDISVAAKLPAL--KELLLECGIGIVEGEDNQLCLASQHRALIFFQLKSMIDIVENDLLKNLMPSVTYLRLDGSVPTNMRHEIVQRFNNDVSID-ILLLSTSVGGLGLNLTGADTVIFAEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNTIEEKILGLQKFKLKTANTVISSENSSIESMATDQIFDLFSLEEN 1635
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000012427 (supercontig:LSalAtl2s:LSalAtl2s90:869777:873113:1 gene:EMLSAG00000012427 transcript:EMLSAT00000012427 description:"maker-LSalAtl2s90-augustus-gene-8.6") HSP 1 Score: 221.861 bits (564), Expect = 5.600e-61 Identity = 162/580 (27.93%), Postives = 285/580 (49.14%), Query Frame = 0 Query: 150 ADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCT-------PLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQ-SEVGLVLCDEGHRLKNSENQTYQALMQLKAR--RRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVR-------------------RSLKGSEGVKMTSSSLAAITSLKKLVNHPDLI---FEHCRDRKEGFEN------AFQYYPEAYNPSKQRLQPA-LSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFND-PNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVA---DLRDLF 686 +D+ P P L + LRP+Q +G++F+Y + P +G ++ADEMGLGKT+Q I + +L ++ + + ++V+P+S++ NW +E+ W + L K +I + I++ SY+ R ++ +++ DE HRLK+ + ++ L + ++ L+G +QN E ++L+ +VN G LGT +F ++ PI G +A + + + + + I+RR + LP+K +++I C TPLQ +++ + + ++ +S S+ +K+ I K+ NH L+ F + F + +Y E N S L SGK+ +L LL +K +K++L S T+ L++ E+ LR Y R+DG+ K R +V++FN+ PN F+ +LS+KAGG GLN+ GAN ++++DP+WNP++D QA R +R GQ K+ ++RL+ G IEE I+ RQ +K+ L S VD + V+R+F + D R++F Sbjct: 30 SDAXSIPAP------LAKCLRPYQIDGIRFLYGLYSK---PGVNGGLLADEMGLGKTIQVIGFLASLSNKTNIGVIDGNLKRKIRGRXLLVSPASIIYNWESELQTWSYFSIG-LYYGPNRKKEI---------LYNSPEKYEIILTSYDILREDIDIISSLFPWKVIILDEIHRLKDPNGRNHKVLKSYLSSIPLKIGLAGVLLQNKYQELWALLEWVNAGCLGTWKDFNAKYSRPIELGLRLNATTSQLARARLLQRDFDILKDEMILRRMKKDKFVDLPLKLDKIIYCAPTPLQIALFRKLLNTPEMQALWKKKKKGKYWNKGQSESKSSPDSKKIKV----FTFIHLFLKIANHVGLLSPKFNQSSKTQREFASRAISQVVSDFYKEIANXSFLSLADTRYSGKMVVLADLLTALKKEQGNKLLLFSYSTKVLNILEQFIKLRXYXXRRIDGATPAKTRFSIVNEFNEHPNI--FVLLLSTKAGGLGLNITGANVVIIYDPNWNPSHDLQAQDRAYRIGQTKDVRVFRLITSGCIEENIYLRQLYKQQLCSNAVDCVK-VKRYFQGSPNFDKREVF 583
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000010320 (supercontig:LSalAtl2s:LSalAtl2s683:133039:146718:1 gene:EMLSAG00000010320 transcript:EMLSAT00000010320 description:"maker-LSalAtl2s683-augustus-gene-1.38") HSP 1 Score: 219.164 bits (557), Expect = 9.185e-60 Identity = 156/505 (30.89%), Postives = 245/505 (48.51%), Query Frame = 0 Query: 169 LRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGG-RVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSD--TVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGK-LSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDR 669 LR +Q +G+ ++ C+ + I+ADEMGLGKT+Q + ++ L P + VV P S + W E +W V D S+S I R R N IL +YE + L +++ DE HRLKN ++ Y+ L L +R+L++GTP+QN L E +SL+HF+ EF ++F + K+G KL +L + I+RR + + K LP K E+++ ++ Q+ Y+ +T + + + +KGS T S + + LKK NH L R E +N F E ++LQ L G +L L T +V++ S + LD+ LR + + RLDG + + R + ++ FN+P S +F F+LS++AGG G+NL A+ +++FD DWNP ND QA AR R GQK + +YRL+ + ++EE I +R K L V+ R Sbjct: 476 LRDYQLDGINWLVHA--WCK---QNSVILADEMGLGKTIQTVNFLYYLFHTHQLYGPFL----VVVPLSTLDAWQREFARWAPDINVLSYVGDVASRSII-REYEWTHPGNKRSKFNAILT-TYEIVLKDKQFLINVPYAVIMVDEAHRLKNDDSMLYKCLQDLTVYQRLLITGTPLQNSLKELWSLLHFIMPDKFDRWDEFNEQF-----------GTSSAEKRGYTKLHKL---LEPYILRRVKKDVEKSLPAKVERILRVDMSRKQKQFYKWILTRNYAALTKGIKGS-----TVSFVNIVMELKKCCNHILLT------RPEEIDNTFTMSRE------EKLQFLLRGSGKLLLLDKLLVRLRETGHRVLIFSQMVRVLDILAEYLELRRFSFQRLDGGIKGELRKQALEHFNNPGSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKDQVNVYRLVTMNSVEEDIIERAKKKMILDHLVIQR 938
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000001291 (supercontig:LSalAtl2s:LSalAtl2s1214:48338:54824:1 gene:EMLSAG00000001291 transcript:EMLSAT00000001291 description:"augustus_masked-LSalAtl2s1214-processed-gene-0.5") HSP 1 Score: 212.616 bits (540), Expect = 2.207e-58 Identity = 142/481 (29.52%), Postives = 235/481 (48.86%), Query Frame = 0 Query: 195 CIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGG-RVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQAL-MQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTV----RRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLI--FEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVV 667 +ADEMGLGKT+Q I L+ L+++ + P + ++ P S + NW E KW ++ GS+ + R +L+ +YE VL + ++ DEGHR+KN + Q L + R+LL+GTP+QN L E ++L++F+ I + F + F P + L ++ + + L V+ ++RR + + LP K E ++ C+++ LQ IY + + RR KG+ G T + + I L+KL NHP + E + G P+ Y S GK ++D +L +K S +V++ TQ + + E R ++++RLDG+ ++R +++ FN+ NS FIF+LS++AGG GLNL A+ +++FD DWNP D QA R R GQK E + RL+ V ++EE+I +K + V+ Sbjct: 2 AFLADEMGLGKTIQTIALITYLMEKKKNMGPYL----IIVPLSTLSNWILEFGKWAPSVQIVPYKGSPGSRRKAQSQM--------RATKFNVLVTTYEYVIRDKSVLAKIRWKYMIIDEGHRMKNHHCKLTQILNTYYTSNNRLLLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFAVTGEKVELNEE--ETILIIRRLHKVLRPFLLRRLKKDVESQLPDKVEYIVKCEMSALQRVIYSQMAETGVLITEDRRDRKGNSG---TKALMNTIMQLRKLCNHPFMFQKLEEAYAKHTGLPTNIVTGPDLYRSS---------GKFELIDRILPKLKKS-GHRVLMFCQMTQCMTIIEDYFNFRGFKFLRLDGTTKSEERGEMLATFNEKNSEYFIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVI 455
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000004539 (supercontig:LSalAtl2s:LSalAtl2s237:482549:485751:-1 gene:EMLSAG00000004539 transcript:EMLSAT00000004539 description:"augustus_masked-LSalAtl2s237-processed-gene-4.3") HSP 1 Score: 208.764 bits (530), Expect = 7.815e-57 Identity = 137/443 (30.93%), Postives = 224/443 (50.56%), Query Frame = 0 Query: 231 IVVAPSSLVKNWANEINKWLGG-RVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNP----ILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGV-KMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVV 667 +V+ P + + NW NE KW R CL D ++ N F R + P +L+ S+E V + ++ DE HR+KN E++ + ++K R+LL+GTP+QN+L E ++L++F+ + ++++F K F G D+ + L ++ ++RR ++ + K L K E I L+ +Q Y + D + G+ V KM ++ + L+K VNHP L +G E Y + + SGKL ++D LL +K S +V++ + T+ LD+ E C R Y Y R+DG + + R + +D++N PNS +FIFMLS++AGG G+NL A+ +++FD DWNP D QAM R R GQKK+ ++RL+ T++EKI +R A K L ++ Sbjct: 115 MVLVPKTTLANWMNEFKKWCPTLRAVCLIGDQETR-----------NKFIRDTMMPGGWDVLVTSFEMLLREKSVFKKFTWRYMVIDEAHRIKNEESKLSLIVREIKTTNRLLLTGTPLQNNLHELWALLNFLLPEVFSSSNDFDKWFNTDTCLGDDS------------LVKRLHGILKPFVLRRLKSDVEKSLLPKKETNIYMSLSKMQREWYTKILMKDI--DIVNGAGKVEKMRLQNI--LMQLRKCVNHPYLF--------DGAEPGPPYTTDEHLVEN-------SGKLQVIDKLLPKLKEQES-RVLIFTQMTRILDILEDYCWFRGYSYCRIDGQTSHEDRVRQIDEYNMPNSEKFIFMLSTRAGGLGINLYTADIVILFDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVMENTVDEKIVERAAIKLRLDRMII 514
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Match: EMLSAG00000009416 (supercontig:LSalAtl2s:LSalAtl2s600:248324:253025:1 gene:EMLSAG00000009416 transcript:EMLSAT00000009416 description:"maker-LSalAtl2s600-snap-gene-2.21") HSP 1 Score: 209.92 bits (533), Expect = 8.305e-57 Identity = 148/511 (28.96%), Postives = 242/511 (47.36%), Query Frame = 0 Query: 168 VLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWL-GGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQAL-MQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYES------FVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIF---EHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVV 667 +L+ +Q +G++++ + I+ADEMGLGKT+Q I L+ L+++ + P + ++ P S + NW E KW +V G + +I + F +L+ +YE VL + ++ DEGHR+KN + Q L + R+LL+GTP+QN L E ++L++F+ I + F + F P +V+ ++RR + + LP K E +I C+++ LQ +Y+ +T D +R K S K T + I L+KL NHP IF E C + G P+ Y S GK ++D +L + T +V++ TQ + + E R ++++RLDG+ ++RA ++ FN +S FIF+LS++AGG GLNL A+ +V+FD DWNP D QA R R GQK E + RL+ V ++EE+ +K + V+ Sbjct: 404 ILKEYQIKGLEWLVSLYN-----NNLNGILADEMGLGKTIQTIALITYLMERKKNMGPYL----IIVPLSTLSNWTLEFEKWAPSAQVVAYKGSPGLRRNIQSQMKA--TKFN------VLVTTYEYVIKDKSVLAKIRWKYMIIDEGHRMKNHHCKLTQILNTYYTSNNRILLTGTPLQNKLPELWALLNFLLPSIFKACNTFEQWFNAPFA----------------------TTVLRPFLLRRLKKDVESQLPDKVEYIIKCEMSALQRVVYQQMAEKGVLITED--KRDKKTSSSDKKTLRN--TIMQLRKLCNHP-FIFQKIEECYAKHIGLPTDIVTGPDVYRSS---------GKFELIDRILPKLN-KTGHRVLMFCQMTQCMTIIEDYFNFRGFKFLRLDGTTKAEERADMLKIFNQKDSDYFIFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERXLAAARYKLNMDEKVI 860
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|292630953|sp|B4NXB8.2|RAD54_DROYA (RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra) HSP 1 Score: 833.173 bits (2151), Expect = 0.000e+0 Identity = 414/753 (54.98%), Postives = 539/753 (71.58%), Query Frame = 0 Query: 11 RRSAAPSAVAKRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPS-GYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWE--AGVTFAFHHKSHEQ 760 RRS APS + TP + R+C Q + E+E + +++ L + N + L S +ER I ++L + FKVP+ NY P G R LG+RR +R+PLHDP+ NALVL+ PP +EH+++ D + V VVVDP+L+ +LRPHQREGV+FMY+CV G R + +GCIMADEMGLGKTLQC+TL+WTLL+Q P+C P I KAIVV+PSSLVKNW E KWL GR+ CL ++ G+K + R L F T R P+L+ISYETFR++A++L + EVG+V+CDEGHRLKNS+N TYQALM LK +RRVLLSGTPIQNDL EY+SLV+FVN +LGTA+ F++ FE+ ILRG++ D+ + ++ EK EL +V++CIIRRT +L+KYLPVK+E VIC KLT +Q +Y +F+ SD VRRSL K + ++LA IT+LKK+ +HPDLI+E R++GFEN+ P YN + L P LSGK +LD +LA ++A +DKVVL+SNYTQTLDLFE+L R Y +VRLDG+M+IKKR+KVVD+FNDP S F+FMLSSKAGGCGLNLIGANRL MFDPDWNPANDEQAMARVWRDGQKK C+IYR++A G+IEEKI QRQ HKK+LSS ++D E E+HF+ DL+DLF + + SDTH+K KC+RCV +QVKPP ++DC S+LSQW+H ++ +GL D L Q W V+F FHH+S Q Sbjct: 2 RRSLAPSQRGPMRPESRHSFTPPLLKKNKRSC-----QQELEREQELDRKRQSALRDASNTMDLPLPIRFTANSEYERAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPVACNALVLFNPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSSRLGT-PVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELYTNFLKSDQVRRSLADCNE-KASLTALADITTLKKICSHPDLIYEKITAREKGFENSQNVLPSNYN--TKDLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDADILSDTHEKLKCKRCVQNVQVKPPPDNTDCTSHLSQWYHCSNNRGLPDNILAQAWTDCKCVSFVFHHRSQAQ 744
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|292630865|sp|B4GS98.1|RAD54_DROPE (RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra) HSP 1 Score: 832.017 bits (2148), Expect = 0.000e+0 Identity = 417/762 (54.72%), Postives = 536/762 (70.34%), Query Frame = 0 Query: 2 LAPVQAGGHRRSAAPSAVAKRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPS-GYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAG--VTFAFHHKSHEQ 760 LAP Q GG R S+ ++ TP + RAC++ + E+E ++ L + N + + L + +E I ++L + FKVPI NY P G R LG+RR R+PLHDPL NALVLY P ++H+++ + V VVVDP+L+ +LRPHQREGV+FMY+CV G R + +GCIMADEMGLGKTLQC+ L+WTLLKQS +C P I K I+V+PSSLVKNW E KWL GR+ CL ++ GSK + R L F R P+L+ISYETFR++A++L + EVG+V+CDEGHRLKNS+N TYQALM LK +RRVLLSGTPIQNDL EYFSLV+FVN +LGTA++F++ FEN ILRG++AD+ + + EK EL +V++CIIRRT +L+KYLPVK+E VIC KLTP+Q +Y +F+ SD VRRSL + K + ++LA IT+LKKL +HP+LI E ++GFEN+ P YNP K + P LSGK +LD +LA ++A +DKVVL+SNYTQTLDLFE L R Y +VRLDG+M+IKKR+KVVD+FNDP S F+FMLSSKAGGCGLNLIGANRL MFDPDWNPANDEQAMARVWRDGQKK C+IYRL+A G+IEEKI QRQ HKK+LSS ++D E E+HF+ DL+DLF + + SDTHDK KC+RCV +Q+ PP D+DC S+LSQW+H ++ +GL D L Q W V+F FHH+S Q Sbjct: 5 LAPSQRGGQRLSS------------RNDFTPPLLKKNKRACQQ---------DLEQERLRQSALRDATNTSDLPLPIRFTANTEYEMAIAKVLARKFKVPIDNYVPDYGGNRTLGVRRRIVRRPLHDPLACNALVLYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNFNGCIMADEMGLGKTLQCVALVWTLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCLAMEGGSKENTVRALEQFSMNASTRLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRGQNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLYTNFLKSDQVRRSLADCKE-KASLTALADITTLKKLCSHPNLICEKIAAGEKGFENSQNILPINYNP-KGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFELLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFSFDPDILSDTHDKLKCKRCVQNVQMMPPPDDTDCTSHLSQWYHCSNNRGLPDNILAQAWTDSKCVSFVFHHRSQSQ 742
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|292630861|sp|B3MMA5.1|RAD54_DROAN (RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra) HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0 Identity = 417/753 (55.38%), Postives = 546/753 (72.51%), Query Frame = 0 Query: 11 RRSAAPSA-VAKRLSWLQSPSTPIHHTSSGRACKRT-RVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPS-GYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAG--VTFAFHHKSH 758 RRS APS + + + + + P+ + RAC++ R+ D+D +E++ KR L + N + + L S +E I ++L + FKVPI NY P G RCLG+RR R+PLHDP NALVL++PP +EH+++ D + V VVVDP+L+ +LRPHQREGV+FMY+CV G + D +GCIMADEMGLGKTLQC+TL+WTLL+Q P+ P I KAIVV+PSSLVKNW E KWL GR+ CL ++ G+K + R L F T + P+L+ISYETFR++A++L + EVG+V+CDEGHRLKNS+N TYQALM LK +RRVLLSGTPIQNDL EYFSLV+FVN +LGTA++F++ FEN ILRG++AD+ + KK EK EL +V++CIIRRT +L+KYLP+K+E VIC KLT +Q +Y +F+ SD VRRSL K + ++LA IT+LKK+ +HPDLI + +++GFEN+ P Y P + + P SGK +LD +LA ++A+ +DKVVL+SNYTQTLDLFE+L R Y +VRLDG+M+IKKR+KVVD+FNDP+S F+FMLSSKAGGCGLNLIGANRL MFDPDWNPANDEQAMARVWRDGQKK C+IYRL+A GTIEEKI QRQ HKK+LSS ++D E E+HF+ DL+DLF ++ SDTH+K KC+RCV IQ KPP+ +DC S+LSQW+H ++ +GL D L Q W V+F FHH+S Sbjct: 2 RRSLAPSQRIGQSTASRNAFTPPLLQKKNKRACQKDLRL---DTDADEDKERKRFGLRDATN-SEIPLPIRFTANSAYELAIAQVLARKFKVPIDNYVPDYGGNRCLGVRRVVVRRPLHDPQACNALVLFQPPNYTEHERMSMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEG-KKGDFNGCIMADEMGLGKTLQCVTLVWTLLRQGPESKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLAMEGGTKENTIRVLEQFSMTSSKLGT-PVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRGQNADSTEGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEMVICVKLTAIQLQLYTNFLNSDQVRRSLADCNE-KASLTALADITTLKKICSHPDLIHQKIEAKEKGFENSQNVLPSNYKP--KEICPEWSGKFMLLDFMLAAIRAAGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDKFNDPDSECFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGTIEEKILQRQTHKKSLSSTIIDNNESSEKHFTRDDLKDLFSFDQKILSDTHEKLKCKRCVQNIQTKPPSESTDCTSHLSQWYHCSNNRGLPDSILAQAWTDSKCVSFVFHHRSQ 745
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|3123262|sp|P41410.2|RAD54_SCHPO (RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog 1) HSP 1 Score: 654.825 bits (1688), Expect = 0.000e+0 Identity = 333/616 (54.06%), Postives = 433/616 (70.29%), Query Frame = 0 Query: 157 VPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDC-TPLIEKAIVVAPSSLVKNWANEINKWLG-GRVSCLTIDS-GSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQR-----LQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQ-VKPPAPDSDCNSNLSQWHHSTSK--KGLVDMALKQCWEAG---VTFAFHHKSH 758 V VV+DP L R+LRPHQ EGVKF+Y CVTG +GCIMADEMGLGKTLQCI L+WTLLKQSP P IEKAI+ PSSLVKNWANE+ KWLG ++ +D SK ++ L + + GR+ P+LI SYET R + + L+ +E+G++LCDEGHRLKNS++ T+ AL +L +RRV+LSGTPIQNDL EYFSL++F N G+LG+ EFRK +E PIL+GRDAD D + G KLAELA +VNR IIRRT +LSKYLPVKYE V+ C L+ Q S+Y+ F+TS + + L+G+ S L AI LKK+ NHPDL+ + E E +P + P + R + +LSGK+ +L+ +L +K T DK+VL+SNYT TLDLFE+LC R Y+ +RLDG+M + KR ++VD FNDP F+F+LSSKAGGCG+NLIGANRL++FDPDWNPA D+QA+ARVWRDGQKK+CF+YR +A GTIEEKIFQRQ+HK++LSSCVVD +DVERHFS+ +LR LF+L +T +TH+ +KC+RC G Q ++ PA + S W+H T+ + D LK+ EAG V+ F +KSH Sbjct: 252 VAVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFITSPEINKILRGT-----GSQPLKAIGLLKKICNHPDLL-----NLTEDLEGCEALFPPGFIPRELRGRDRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFSLDNLRQLFQLNDHTVCETHETYKCKRCRDGKQFIRAPAM---LYGDTSTWNHFTNPTLDRIEDHLLKR--EAGKQQVSTVFQYKSH 852
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|417577|sp|P32863.1|RAD54_YEAST (RecName: Full=DNA repair and recombination protein RAD54) HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0 Identity = 327/692 (47.25%), Postives = 426/692 (61.56%), Query Frame = 0 Query: 111 GRCLGIRRSGAR-QPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPD----------------------------------THGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLG-GRVSCLTIDS------GSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRC-VSGIQVK-PPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSH 758 GR + +G R +PL + L D+ E S +K K S VPVV+DP L ++LRPHQ EGV+F+Y CVTG + D +GCIMADEMGLGKTLQCI LMWTLL+Q P LI+K I+V PSSLV NWANE+ KWLG ++ L +D G + + + ++ + GR V P+LIISYET R + L VGL+L DEGHRLKN ++ T+ AL + RRV+LSGTPIQNDL EYF+L+ F N G+LG+ +EFRK FENPILRGRDADA +I KG +L +L+++V++ IIRRT +L+KYLP KYE VI L PLQ +Y + S R +K S L AI LKKL NHP+L+ E Y + ++ +Q S K SIL+ L +K + DK+VL+SNYTQTLDL E++C + Y VRLDG+M+I KR K+VD+FNDP EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D+QA+ARVWRDGQKK+CFIYR ++ GTIEEKIFQRQ+ K +LSSCVVD +EDVER FS +LR LF+ +NT +TH+ + C+RC G Q+K PA + + +H +K + + ++FAF + SH Sbjct: 224 GRHPALMTNGVRNKPLRELLGDS--------ENSAENKKKFAS----VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTESQKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARD-VQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQLKRAPAMLYGDATTWNHLNHDALEKTNDHLLKNEHHYNDISFAFQYISH 898
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|403399531|sp|A4PBL4.1|RAD54_ORYSJ (RecName: Full=DNA repair and recombination protein RAD54; Short=OsRad54) HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0 Identity = 300/648 (46.30%), Postives = 409/648 (63.12%), Query Frame = 0 Query: 83 TSNHERLIRRLLNKPFKVPIPNYQPSGYGRCL----------GIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPD-THGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHA-KVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEG---FENAFQYYPEAYNPSKQR-------LQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERH---FSVADLRDLFKLEKNTASDTHDKFKCRRC 705 + N+E+L RRL + VP + QP L + + P +PL +L++P DK N + VD +L R LRPHQREGV+FM+DCV+G D GCI+AD+MGLGKTLQ ITL++TLL Q D P++++A+VV P+SLV NW +EI KWL GRV L + +++D+ + F+ R V LI+SYETFR+H+ K L++CDE HRLKN + T +AL L +RR+LLSGTP+QNDL E+FS+V+F N G+LG A+ FR+ +E PI+ GR+ A A++ G+E+ AEL++ VN I+RRT ALLS +LP K +V+CCKLT LQ ++Y F+ S V+R + SEG K S LA IT+LKKL NHP LI++ + G F++ +++P + + LSGK+ +L LL ++ T D++VLVSNYTQTLDLF +LC R Y Y+RLDG+ +I KR K+V+QFNDP+ EF+F+LSSKAGGCGLNL+G NRL++FDPDWNPAND+QA ARVWRDGQKK +IYR L+ GTIEEK++QRQ K+ L + + D + S DLRDLF + S+ H+ KC RC Sbjct: 151 SENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDDSVENEESLPPGIEPL-----ILWQP---EGRDK----ENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQV---LIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRLI--SEGTKQ-SKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADGKMQGSSLSTEDLRDLFTFHEQIRSEIHENLKCNRC 780
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|122222846|sp|Q0PCS3.1|CHR25_ARATH (RecName: Full=Protein CHROMATIN REMODELING 25; Short=AtCHR25; AltName: Full=DNA repair and recombination protein RAD54; Short=AtRAD54) HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0 Identity = 291/623 (46.71%), Postives = 398/623 (63.88%), Query Frame = 0 Query: 100 VPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCR-IPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGR-RPVNPILIISYETFRLHAKVLHQSE-VGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEG---FENAFQYYPEAYNPSKQRLQPA-------LSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERH----FSVADLRDLFKLEKNTASDTHDKFKCRRC 705 P+ P+ I R + + P + LVL++ E D N ++V +L + LRPHQREGV+FM+DCV+G + +GCI+AD+MGLGKTLQ ITL++TLL Q D TP+++KAI+V P+SLV NW EI KW+G R+ + + ++ D+ L+G +++F R R +LIISYETFR+H+ QSE L++CDE HRLKN + T +AL L +RRVLLSGTP+QNDL E+F++V+F N G LG A+ FR +E PI+ GR+ A ++ ++ AEL+S VN+ I+RRT ALLS +LP K +V+CCK+T LQ ++Y F++S ++R+L ++ K T LA IT+LKKL NHP LI++ + G FEN +++P + LSGK+ +L LLA ++ T D++VLVSNYTQTLDLF +LC R Y ++RLDGS TI KR K+V++ NDP EF F+LSSKAGGCGLNLIGANRLV+FDPDWNPAND+QA ARVWRDGQKK ++YR L+ GTIEEK++QRQ K+ L + + D S DLRDLF + S+ H+K C RC Sbjct: 120 TPVVVALPTKLEASTNIERDEEEEVVCLPPDIEPLVLWQSEE---------DGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDV---LSG-IDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRAL--ADNAKQTKV-LAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRC 726
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|51316526|sp|Q9DG67.1|RA54B_CHICK (RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B) HSP 1 Score: 490.73 bits (1262), Expect = 3.363e-160 Identity = 270/595 (45.38%), Postives = 370/595 (62.18%), Query Frame = 0 Query: 123 QPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSP-DCTPLIEKAIVVAPSSLVKNWANEINKWLGG-RVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIF----EHCRDRKEG-------FENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKA-STSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVER-HFSVADLRDLFKLEKNTASDTHDKFKC 702 +P H+P + N+LV+ P + H + +G V VVVDP + LRPHQREG+ F+Y+CV G R+ G I+ADEMGLGKTLQCI+L+WTLL+Q C P++++A++V P SLVKNW E KWLG R+ T+D D + F+++ P+ ++IISYE + E L++CDEGHRLKNS +T AL L RR++L+GTPIQNDL E+++L+ FVN G+LG+ S +RK +E PI+R R+ A ++ G ++ AEL + I+RRTQ +++K+LP K E +I C+ T LQ +Y ++S + L+G S L I +LKKL NHP L+F E C D K +E +P+ Y + SGKL +L LLA ++ S+S++VVLVSNYTQTL++ C Y Y RLDG+ + +R ++VD FN SP FIF+LSSKAGG GLNL+GA+ L+++D DWNPA D QAMARVWRDGQK IYRLL GTIEEKI+QRQ K+ LS VVD + E HFSV +LR+LF L +N++ THD +C Sbjct: 259 KPRHNPNDTNSLVMPRPN--ASHQCMFNKAGLPVVDVVVDPYIANNLRPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQ------DHKVEEFISS----PLYSVMIISYEMLLRSLDQIQAIEFNLLICDEGHRLKNSSIKTTTALTNLSCERRIILTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGLFILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSSRVISSCLQGR---LENSPHLICIGALKKLCNHPCLLFKALKEKCCDPKSDEHVESSLYEGLTDVFPQDY--TSDTFSEIDSGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNVLLETCKCYGYSYTRLDGNTPVSQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKCTVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELRNLFTLHENSSCVTHDLLEC 836
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|51316246|sp|Q6PFE3.1|RA54B_MOUSE (RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B) HSP 1 Score: 475.707 bits (1223), Expect = 8.295e-155 Identity = 287/704 (40.77%), Postives = 391/704 (55.54%), Query Frame = 0 Query: 91 RRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSP-DCTPLIEKAIVVAPSSLVKNWANEINKWLGG-RVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEH---------CRDRKEG--FENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFV-KASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVER-HFSVADLRDLFKLEKNTASDTHDKFKC-------------------RRCVSGIQVKPPAPDSDCNSNLSQW-HHSTSKKGLVDMALKQCWEAGVTFAFHHKSHE 759 R+ + PFK + Q G +R +P H+P NALV+ P E H ++ V VV+DP L LRPHQ++G+ F+Y+CV G R G I+ADEMGLGKTLQCI+L+WTL Q P P+I+K ++V P SLV NW E KWLG R+ T+D D + F+N+ + +LIISYE + GL++CDEGHRLKNS +T AL L + V+L+GTP+QNDL E+F+LV FVN GILG+ S +RK +E PI+ R+ + ++ + G + EL + R I+RRTQ +++KYLP K E V+ C+ LQ +Y + S +VR L +G+ S+ L I +LKKL NHP L+F C + +E + +P YNP + SGKL +L LLA + + ++KV+LVSNY QTL++ E +C Y RLDG + +R +VD FN S +FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK IYRLL GTIEEKI+QRQ K+ LS VVD E FSV +L++LF L +++ THD C R+C G Q K A S L QW H S L D L++ E V+F F + +++ Sbjct: 205 RKCFSNPFKSVCQSTQAQG-------KRWNDCRPRHNPCTPNALVMPRPDE--NHQRMFNRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGMRAVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQ------DHKVEEFINS----TFHSVLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSKEERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQSVRFCL---QGLLENSAHLICIGALKKLCNHPCLLFSSVKGKEFSSSCEENEERNLCQGLLSVFPAGYNPLQ--FSEEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKRHGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHIQFSVEELKNLFTLHESSHCVTHDLLDCECTGEKGHTEDASEGPVASRQCQFGPQ-KSDALRPLSMSQLKQWKHFSGDHLNLPDPFLERIRE-NVSFFFQNITNQ 882
BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Match: gi|51316548|sp|Q9Y620.1|RA54B_HUMAN (RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B) HSP 1 Score: 474.937 bits (1221), Expect = 3.638e-154 Identity = 278/670 (41.49%), Postives = 378/670 (56.42%), Query Frame = 0 Query: 123 QPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSP-DCTPLIEKAIVVAPSSLVKNWANEINKWLGG-RVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDR-----------KEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFV-KASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVER-HFSVADLRDLFKLEKNTASDTHDKFKCRRCV-----SGIQVKPPAPDSDCN----------------SNLSQW-HHSTSKKGLVDMALKQCWEAGVTFAFHH 755 +P HDP N+LV+ P + H + + V VV+DP L LRPHQ+EG+ F+Y+CV G R+ G I+ADEMGLGKTLQCI+L+WTL Q P P+I+K ++V P SLV NW E KWLG R+ T+D K + F + +LIISYE + + L++CDEGHRLKNS +T AL+ L +R++L+GTPIQNDL E+F+L+ FVN GILG+ S +RK +E PI+ R+ A ++ + G + AEL + I+RRTQ +++KYLP K E V+ C+ LQ +Y + S VR L +G+ S L I +LKKL NHP L+F +++ K ++ +P YNP SGKL +L LLA + + ++KVVLVSNYTQTL++ + +C Y Y RLDG I +R ++VD FN +S FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK IYRLL GTIEEKI+QRQ K+ L VVD + E FSV +L++LF L +++ THD C C +G ++ DC S L QW H S L D L++ E V+F F + Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHK----------VEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCL---QGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNP--LLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGEEVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERITE-NVSFIFQN 902
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|926635438|ref|XP_013783608.1| (DNA repair and recombination protein RAD54-like [Limulus polyphemus]) HSP 1 Score: 1045.42 bits (2702), Expect = 0.000e+0 Identity = 512/757 (67.64%), Postives = 603/757 (79.66%), Query Frame = 0 Query: 12 RSAAPSAVAKRLSWLQSPSTPIHHTSSGRACKRTRVQFDDS-------DEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQP-SGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 R APS +AKR L+ + KR RV DS ++ E + RKPL+ + N+ S + HE LIR++L+KPFK+PIPNY+ S GR LG++RSG+R+ LHDP E+ AL+LY PP +S HD+LK + Q PV VVVDP+L++VLRPHQREGVKFM+DCVTG +IPD++GCIMADEMGLGKTLQCITL+WTLL+QSPD P IEKAI+VAPSSLVKNW NEI KWLG R+ L IDSG+KS+ID+NL FMNT GRRPVNPILIISYETFRLHA+VLH+SEVGLV+CDEGHRLKNS+NQTY AL +L A+RRVLLSGTPIQNDLLEYFSL+HFVN+GILGTA EF++++E PILRGRDA A D +KG EKL EL S+VNRC+IRRT +LSKYLPVK EQVICC LTPLQ+SIY V S T+ S +E K+ S+SL+ IT+LKKL NHP LI+E C+ R + E +P Y+ K L P LSGK+S+LDC LA +K++T+DKVVLVSNYTQTLDLFE+LC R+Y+YVRLDGSM+IKKRAKVV+QFN+P SPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND QAMARVWRDGQKK+CFIYRLL GTIEEKIFQRQ HKKALSSCVVD EEDV+RHFS+A+LR+LF+LE+NT SDTHDK KC+RCV+ IQVKPP D+DC S+LS WHH KKGLVD+ LK+CWEAGVTF FH KSHEQ Sbjct: 3 RRLAPSQLAKRK--LEGDKDDGKLSFQAVKFKRNRVSLYDSHTKCIDFSKQSNEIDIRKPLQTVTNILLCS------DHAAHEELIRKILSKPFKIPIPNYKGGSLIGRSLGVKRSGSRRALHDPDEEGALILYTPPTLSVHDQLKVNIEQLPVHVVVDPLLSKVLRPHQREGVKFMWDCVTGKQIPDSYGCIMADEMGLGKTLQCITLVWTLLRQSPDAKPTIEKAIIVAPSSLVKNWYNEIKKWLGMRIDALAIDSGTKSEIDKNLKSFMNTHGRRPVNPILIISYETFRLHAEVLHRSEVGLVICDEGHRLKNSDNQTYHALNKLNAKRRVLLSGTPIQNDLLEYFSLLHFVNQGILGTAHEFKRKYETPILRGRDAAATDKDHEKGKEKLEELISIVNRCMIRRTATILSKYLPVKVEQVICCSLTPLQKSIYSHIVHSKTI--SEVANENTKV-SASLSLITTLKKLCNHPSLIYEQCQQRVKDLEGCLNLFPVGYDFKK--LLPELSGKMSVLDCTLAVIKSTTTDKVVLVSNYTQTLDLFEKLCRHRNYQYVRLDGSMSIKKRAKVVEQFNNPQSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDGQAMARVWRDGQKKQCFIYRLLTTGTIEEKIFQRQTHKKALSSCVVDNEEDVQRHFSLAELRELFRLEENTVSDTHDKLKCKRCVNSIQVKPPPDDADCTSDLSLWHHCPDKKGLVDVVLKRCWEAGVTFTFHQKSHEQ 746
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|1126222477|ref|XP_019645506.1| (PREDICTED: DNA repair and recombination protein RAD54-like isoform X2 [Branchiostoma belcheri]) HSP 1 Score: 1037.33 bits (2681), Expect = 0.000e+0 Identity = 506/753 (67.20%), Postives = 589/753 (78.22%), Query Frame = 0 Query: 11 RRSAAPSAVA---KRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 RRS APS +A ++ P H + + KRT+ + DDS + + R+PL I N P P +S+HE IR +L+KPFK+PIPNY+ LG+RR G R+PLHDP E+ ALVLY PP++S + LK D ++PV VVVDPIL VLRPHQREGVKFM+DCVTG RIP + GCIMADEMGLGKTLQCITL+WTLLKQSPD P I+KAIVV PSSLVKNW NEINKWLG RV+ L IDSGSK IDRNL+ FM+ GRR +PILIISYETFRLHA VLH+ +GLV+CDEGHRLKN EN TYQAL LK RRRVLLSGTPIQNDLLEYFSLVHFVN GILGTA EF+KRFE PILRGRDA A D K+G EKL EL +V+RCIIRRT ++LSKYLPVK EQV+CC+LTPLQ ++Y+ V S V+ L S+ K+T S+ AIT LKKL NHP LI+E C + +EG + A +P Y+P + +QP LSGK+ +LD +LA K TSDKVVLVSNYTQTLDLFE+LC R Y YVRLDGSMTIKKRAKVV++FN+P+SPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKK+C+IYRLLA GTIEEKIFQRQAHKKALSSCVVD+EEDV+RHFS+ +LRDLF L ++T SDTHDKFKCRRCV+ IQV+PP DSDCNS+LSQWHH+ K+GL D+ LK CW+A VTF FHH+SHE+ Sbjct: 2 RRSQAPSQLAAGKRKPGDDDEDWRPNKHLLAPQVAKRTKAKSDDSPSSQFMSPYRRPLTPITNQ------PRFPDSSSHEAFIRSILSKPFKIPIPNYKGPTLKGSLGVRRQGTRRPLHDPEEEGALVLYHPPQLSAQEALKVDLEKHPVHVVVDPILCGVLRPHQREGVKFMWDCVTGVRIPGSQGCIMADEMGLGKTLQCITLLWTLLKQSPDAKPTIDKAIVVTPSSLVKNWYNEINKWLGTRVNALAIDSGSKDQIDRNLDSFMSQQGRRVSSPILIISYETFRLHAAVLHRGPIGLVICDEGHRLKNCENLTYQALSGLKCRRRVLLSGTPIQNDLLEYFSLVHFVNTGILGTAQEFKKRFETPILRGRDASASDKDQKRGEEKLKELLDIVDRCIIRRTASILSKYLPVKIEQVVCCRLTPLQTALYKHMVQSKLVQAQLDKSKSGKVTGSAFTAITQLKKLCNHPSLIYERCLEGEEGLDGALDLFPANYSP--KHIQPELSGKMLVLDYILAMTKTKTSDKVVLVSNYTQTLDLFEKLCRSRGYLYVRLDGSMTIKKRAKVVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKQCYIYRLLATGTIEEKIFQRQAHKKALSSCVVDQEEDVDRHFSLDELRDLFPLNEDTISDTHDKFKCRRCVNRIQVRPPPDDSDCNSDLSQWHHAADKRGLQDLMLKACWDAAVTFTFHHRSHEE 746
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|1227989889|ref|XP_021926677.1| (DNA repair and recombination protein RAD54-like [Zootermopsis nevadensis] >gi|646710322|gb|KDR15866.1| DNA repair and recombination protein RAD54-like [Zootermopsis nevadensis]) HSP 1 Score: 1036.56 bits (2679), Expect = 0.000e+0 Identity = 510/750 (68.00%), Postives = 586/750 (78.13%), Query Frame = 0 Query: 11 RRSAAPSAVAKRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 RRS APS VAKR + +S R KR+ + RKPL + PE S HE LIR+LL+KPFKVPIPNYQ GR LG+ RS R LHDP E AL+LYEP E+S HDKLK D + PV VVVDP L+ +LRPHQREGVKFMY+CVTG RIP ++GCIMADEMGLGKTLQCITLMWTLL+Q PDC P I+KA++VAPSSLVKNW NEINKWL GRV+ L IDS SK IDR+L GFM T+ RRPVNPILIISYETFRLHA VLH EVGLVLCDEGHRLKNSENQTYQALM L A+RRVLLSGTPIQNDLLEY+SLV FVN+GILGTA EFR++FE PILRG+DA A ++ +KG L ELA++VNRC+IRRT ALLSKYLPVK EQVIC KLT +Q+ IY F+ SD ++R+++G K+T S+L++IT+LKKL NHPDL+FE +GFE A P+ YNP K + P LSGKL++LDCLLA VKA+T DKVVLVSNYTQTLDLFERL R Y+YVRLDGSMTIKKRAKVV++FNDP S +FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQ+K+C+IYRLL GTIEEKIFQRQAHKKALSS VVD EEDV RHFS ADLRDLFKLE +T SDTH+KF+C RCV+ IQVKPP SDC S+LS W+H K+GL+D+ LKQCW+ G++F FHH+SHEQ Sbjct: 26 RRSLAPSQVAKR-------CIEDNSVTSKRLSKRS-----------CQEPTRKPLAQLSADQQQLRTPE--VISEHEALIRKLLSKPFKVPIPNYQGVPGGRFLGVGRSRCRCSLHDPNEPGALILYEPQELSAHDKLKLDLDKQPVHVVVDPTLSNILRPHQREGVKFMYECVTGQRIPGSYGCIMADEMGLGKTLQCITLMWTLLRQGPDCKPTIDKAVIVAPSSLVKNWYNEINKWLCGRVNALVIDSASKDKIDRDLEGFMQTYSRRPVNPILIISYETFRLHASVLHNGEVGLVLCDEGHRLKNSENQTYQALMGLNAKRRVLLSGTPIQNDLLEYYSLVQFVNQGILGTAQEFRRKFETPILRGQDAMATLEERQKGQTCLDELAAIVNRCLIRRTSALLSKYLPVKIEQVICIKLTDIQQKIYSKFIASDAIKRTVQGGSSGKVTLSALSSITTLKKLCNHPDLVFEKVEAVDDGFEGALSLLPDKYNPRKI-IMPELSGKLAVLDCLLAVVKATTQDKVVLVSNYTQTLDLFERLSRHRGYQYVRLDGSMTIKKRAKVVEKFNDPLSNDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQRKQCYIYRLLCTGTIEEKIFQRQAHKKALSSSVVDNEEDVARHFSQADLRDLFKLETDTLSDTHNKFRCTRCVNRIQVKPPPEGSDCTSDLSCWNHCADKRGLLDLVLKQCWDVGISFVFHHRSHEQ 754
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|1339046565|ref|XP_023711444.1| (DNA repair and recombination protein RAD54-like isoform X2 [Cryptotermes secundus]) HSP 1 Score: 1035.02 bits (2675), Expect = 0.000e+0 Identity = 512/750 (68.27%), Postives = 589/750 (78.53%), Query Frame = 0 Query: 11 RRSAAPSAVAKRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 RRS APS VAKR S P TP + R C + RKPL + + PE S HE LIR+LL+KPFKVPIPNYQ GR LGI R+ R LHDP E AL+LYEPPE + HDKLK D + PV VVVDP L+ VLRPHQREGVKFMY+CVTG RIP ++GCIMADEMGLGKTLQCITLMWTLLKQ DC P I+KAIVVAPSSLVKNW NEINKWL GRV+ L IDS SK IDR+L GFM T+ RRPVNPIL+ISYETFRLHA VLH+SEVGLVLCDEGHRLKNSENQTYQALM L A+RRVLLSGTPIQNDLLEY+SLVHFVN+GILGTA EFR++FE PILRG+DA A ++ +KG L ELA++VNRC+IRRT ALLSKYLPVK EQV+C +LT +Q+ +Y F+ SD +RR+++G K++ S+L+AIT+LKKL +HPDL+FE +GFE A PE YN +++ + P LSGKL++LDCLLA VKA+T DKVVLVSNYTQTLDLFERL R Y+YVRLDGSMTIKKRAKVV++FNDP S +FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQ K+C+IYR L GTIEEKIFQRQAHKKALSS VVD EEDV RHFS+ADLRDLFKLE +T SDTH+KF+C RCV+ IQVKPP SDC S+LS W+H K+GLVD+ LKQCW+ G++F FHH+SHEQ Sbjct: 2 RRSLAPSQVAKRGSE-DRPLTP--KRLNKRCC---------------QEPSRKPLVQLPALQQQPRTPE--IVSEHEALIRKLLSKPFKVPIPNYQGILGGRFLGIGRNRCRCALHDPSEPGALILYEPPEFTAHDKLKMDLDKQPVHVVVDPSLSNVLRPHQREGVKFMYECVTGQRIPGSYGCIMADEMGLGKTLQCITLMWTLLKQGSDCKPTIDKAIVVAPSSLVKNWYNEINKWLCGRVNVLVIDSSSKDKIDRDLEGFMQTYSRRPVNPILVISYETFRLHASVLHKSEVGLVLCDEGHRLKNSENQTYQALMGLNAKRRVLLSGTPIQNDLLEYYSLVHFVNQGILGTAQEFRRKFETPILRGQDAMATLEERQKGQSCLDELAAIVNRCLIRRTSALLSKYLPVKIEQVVCIRLTDIQQKMYSKFIASDAIRRTVQGERSGKVSLSALSAITTLKKLCSHPDLVFEKMEAGDDGFEGALSLLPEKYN-TRKVIMPELSGKLAVLDCLLAVVKATTQDKVVLVSNYTQTLDLFERLSKHRGYQYVRLDGSMTIKKRAKVVEKFNDPLSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQCKQCYIYRFLCTGTIEEKIFQRQAHKKALSSSVVDNEEDVARHFSLADLRDLFKLETDTLSDTHNKFQCTRCVNRIQVKPPPEGSDCTSDLSCWNHCADKRGLVDLVLKQCWDVGISFVFHHRSHEQ 730
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|1339046563|ref|XP_023711443.1| (DNA repair and recombination protein RAD54-like isoform X1 [Cryptotermes secundus]) HSP 1 Score: 1034.63 bits (2674), Expect = 0.000e+0 Identity = 512/750 (68.27%), Postives = 589/750 (78.53%), Query Frame = 0 Query: 11 RRSAAPSAVAKRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 RRS APS VAKR S P TP + R C + RKPL + + PE S HE LIR+LL+KPFKVPIPNYQ GR LGI R+ R LHDP E AL+LYEPPE + HDKLK D + PV VVVDP L+ VLRPHQREGVKFMY+CVTG RIP ++GCIMADEMGLGKTLQCITLMWTLLKQ DC P I+KAIVVAPSSLVKNW NEINKWL GRV+ L IDS SK IDR+L GFM T+ RRPVNPIL+ISYETFRLHA VLH+SEVGLVLCDEGHRLKNSENQTYQALM L A+RRVLLSGTPIQNDLLEY+SLVHFVN+GILGTA EFR++FE PILRG+DA A ++ +KG L ELA++VNRC+IRRT ALLSKYLPVK EQV+C +LT +Q+ +Y F+ SD +RR+++G K++ S+L+AIT+LKKL +HPDL+FE +GFE A PE YN +++ + P LSGKL++LDCLLA VKA+T DKVVLVSNYTQTLDLFERL R Y+YVRLDGSMTIKKRAKVV++FNDP S +FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQ K+C+IYR L GTIEEKIFQRQAHKKALSS VVD EEDV RHFS+ADLRDLFKLE +T SDTH+KF+C RCV+ IQVKPP SDC S+LS W+H K+GLVD+ LKQCW+ G++F FHH+SHEQ Sbjct: 4 RRSLAPSQVAKRGSE-DRPLTP--KRLNKRCC---------------QEPSRKPLVQLPALQQQPRTPE--IVSEHEALIRKLLSKPFKVPIPNYQGILGGRFLGIGRNRCRCALHDPSEPGALILYEPPEFTAHDKLKMDLDKQPVHVVVDPSLSNVLRPHQREGVKFMYECVTGQRIPGSYGCIMADEMGLGKTLQCITLMWTLLKQGSDCKPTIDKAIVVAPSSLVKNWYNEINKWLCGRVNVLVIDSSSKDKIDRDLEGFMQTYSRRPVNPILVISYETFRLHASVLHKSEVGLVLCDEGHRLKNSENQTYQALMGLNAKRRVLLSGTPIQNDLLEYYSLVHFVNQGILGTAQEFRRKFETPILRGQDAMATLEERQKGQSCLDELAAIVNRCLIRRTSALLSKYLPVKIEQVVCIRLTDIQQKMYSKFIASDAIRRTVQGERSGKVSLSALSAITTLKKLCSHPDLVFEKMEAGDDGFEGALSLLPEKYN-TRKVIMPELSGKLAVLDCLLAVVKATTQDKVVLVSNYTQTLDLFERLSKHRGYQYVRLDGSMTIKKRAKVVEKFNDPLSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQCKQCYIYRFLCTGTIEEKIFQRQAHKKALSSSVVDNEEDVARHFSLADLRDLFKLETDTLSDTHNKFQCTRCVNRIQVKPPPEGSDCTSDLSCWNHCADKRGLVDLVLKQCWDVGISFVFHHRSHEQ 732
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|919028433|ref|XP_013398065.1| (DNA repair and recombination protein RAD54-like [Lingula anatina]) HSP 1 Score: 1034.25 bits (2673), Expect = 0.000e+0 Identity = 509/753 (67.60%), Postives = 598/753 (79.42%), Query Frame = 0 Query: 11 RRSAAPSAVA---KRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 RRS APS + KR + TP + K+ RV + D+ + + RKPL + N SL+ +S + HE LI+++L+KPFK+PIPNYQ S + R LG+RR GAR+ LHDP E+ ALVLY PPE+S HD+LK+D + PV VVVDP L +VLRPHQREGVKFMYDCVTG +IP + GCIMADEMGLGKTLQCITL+WTLL+QSPD P I KAIVV+PSSLVKNW NEI+KWL G+V+ L IDSGSK DIDRNL +M G+R PILIISYETFRLHA VLHQ EVGLV+CDEGHRLKNSENQTY AL L A++R+LLSGTPIQNDLLEYFSLVHFVN GILGTA EF+K+FE PILRGRDADA + K+G EKL ELA++VNRCIIRRTQALL+KYLPVK EQV+CCKLTPLQ ++Y+ FVTS ++ K T SSL++IT LKKL NHPDLI++ C + ++GFE A +P+ YNP + L+P +SGK +LD LLA +K ST DK+VLVSNYTQTLDLFERLC R Y YVRLDG+M+IKKRAKVV++FN+P SPEF+FMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK+C+IYRL+A GTIEEKIFQRQAHKKALSSCVVD EEDVERHFS+ DLR+LFKL ++T SDTHDKFKCRRCV+ IQVK P DSDCNS+LSQW+H KKG+VD LK WE+ VTF FHH+SHE+ Sbjct: 2 RRSLAPSQLTPGVKRKTDENGEWTP------KQGGKKLRV---NPDQVDYTSPFRKPLLPLVN---RSLVTDS---TAHEALIKKILSKPFKIPIPNYQGSVFNRALGVRRQGARRALHDPFEEGALVLYSPPELSAHDQLKSDVEKQPVHVVVDPALCKVLRPHQREGVKFMYDCVTGEQIPGSFGCIMADEMGLGKTLQCITLLWTLLRQSPDAKPAISKAIVVSPSSLVKNWYNEISKWLPGKVNALAIDSGSKEDIDRNLVQYMQQQGKRNPFPILIISYETFRLHASVLHQGEVGLVICDEGHRLKNSENQTYSALNALNAKKRILLSGTPIQNDLLEYFSLVHFVNGGILGTAQEFKKKFETPILRGRDADATDEAHKRGQEKLQELATIVNRCIIRRTQALLTKYLPVKIEQVVCCKLTPLQSALYQLFVTSKAAECEKLCAKDGKATLSSLSSITQLKKLCNHPDLIYDKCAEGEDGFEGAMDLFPDGYNP--KVLKPQISGKFQVLDYLLAMIKTSTDDKIVLVSNYTQTLDLFERLCRQRGYLYVRLDGTMSIKKRAKVVEKFNNPASPEFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKQCYIYRLIATGTIEEKIFQRQAHKKALSSCVVDNEEDVERHFSLGDLRELFKLNEDTISDTHDKFKCRRCVNRIQVKAPPVDSDCNSDLSQWNHCADKKGIVDPILKGAWESAVTFVFHHRSHEE 737
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|871273695|ref|XP_012945594.1| (PREDICTED: DNA repair and recombination protein RAD54-like [Aplysia californica]) HSP 1 Score: 1031.17 bits (2665), Expect = 0.000e+0 Identity = 502/755 (66.49%), Postives = 594/755 (78.68%), Query Frame = 0 Query: 11 RRSAAPS----AVAKRLSWLQSPSTPIHHTSSGRACKRTRVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGV-KMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 RRS APS V KR P T KRT+ Q E + R+P I + E+ +HE LIR++L+KPFKVP+PNYQ G R LG+RR GARQPLHDP ED ALVLY PPE+S HD++K D + PV VVVDPIL++VLRPHQREGVKFMYDCVTG +I D +GCIMADEMGLGKTLQC+TL+WTLL+QSPDC P + K I+V PSSLVKNW NE+ KWLG R+ L +DSGSKS+IDRNL FM GRR P+LIISYETFRLHA VLH+ EVGLV+CDEGHRLKNSENQTYQAL LKA+RR+LLSGTPIQNDLLEYFSL+HFVN+GILGTA EF+KRFE PILRGRDADA DD +KG EKL EL ++VNRCIIRRTQ+LL+KYLPVK E VICC L+ +Q ++Y++FV++ R +G+ K T SSLAAIT LKKL NHPDLI++ C +R +GF+++ Q++P Y + + ++P LSGK+ +LD LLA +K +T+DKVVLVSNYTQTLDLFE+LC R+Y+ VRLDG+M+IKKRAK+VD+FNDP+SPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR WRDGQKK+C+IYRL+A GTIEEKIFQRQ HKKALSSCVVD E DVERHFS+ +LR+LF L +NT SDTHDKFKCRRCV+ IQVK P SDCNS+LSQW+HS KKGL D+ LK WE+ +TFAFHH+SHE+ Sbjct: 2 RRSHAPSQRGVVVEKRKPDENDEWRPKKET------KRTKSQVPSYSPMEHMSLYRQPFTAIRSPPSSE---ENVAALSHEDLIRKILSKPFKVPLPNYQGGGLNRALGVRRQGARQPLHDPYEDGALVLYSPPELSAHDQMKTDMEKLPVHVVVDPILSKVLRPHQREGVKFMYDCVTGTQIEDNYGCIMADEMGLGKTLQCVTLVWTLLRQSPDCCPTVTKVIIVCPSSLVKNWHNELAKWLGSRIQALAVDSGSKSEIDRNLVHFMQQQGRRTQFPVLIISYETFRLHAGVLHKGEVGLVICDEGHRLKNSENQTYQALTNLKAKRRILLSGTPIQNDLLEYFSLLHFVNKGILGTAQEFKKRFETPILRGRDADATDDDHRKGKEKLQELLAIVNRCIIRRTQSLLTKYLPVKIEHVICCSLSAVQRTLYQNFVSAMMSR-----CDGISKSTFSSLAAITQLKKLCNHPDLIYDKCVERADGFDDSLQFFPHDY--TTKVVKPELSGKVQVLDTLLALIKMTTNDKVVLVSNYTQTLDLFEKLCRQRNYQNVRLDGTMSIKKRAKIVDRFNDPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARCWRDGQKKQCYIYRLIATGTIEEKIFQRQTHKKALSSCVVDNEVDVERHFSLGELRELFSLNENTISDTHDKFKCRRCVNNIQVKAPPEGSDCNSDLSQWNHSADKKGLEDVLLKGAWESSITFAFHHRSHEE 740
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|1330905869|gb|PNF29788.1| (DNA repair and recombination protein RAD54-like, partial [Cryptotermes secundus]) HSP 1 Score: 1029.24 bits (2660), Expect = 0.000e+0 Identity = 496/699 (70.96%), Postives = 571/699 (81.69%), Query Frame = 0 Query: 62 RKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 RKPL + + PE S HE LIR+LL+KPFKVPIPNYQ GR LGI R+ R LHDP E AL+LYEPPE + HDKLK D + PV VVVDP L+ VLRPHQREGVKFMY+CVTG RIP ++GCIMADEMGLGKTLQCITLMWTLLKQ DC P I+KAIVVAPSSLVKNW NEINKWL GRV+ L IDS SK IDR+L GFM T+ RRPVNPIL+ISYETFRLHA VLH+SEVGLVLCDEGHRLKNSENQTYQALM L A+RRVLLSGTPIQNDLLEY+SLVHFVN+GILGTA EFR++FE PILRG+DA A ++ +KG L ELA++VNRC+IRRT ALLSKYLPVK EQV+C +LT +Q+ +Y F+ SD +RR+++G K++ S+L+AIT+LKKL +HPDL+FE +GFE A PE YN +++ + P LSGKL++LDCLLA VKA+T DKVVLVSNYTQTLDLFERL R Y+YVRLDGSMTIKKRAKVV++FNDP S +FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQ K+C+IYR L GTIEEKIFQRQAHKKALSS VVD EEDV RHFS+ADLRDLFKLE +T SDTH+KF+C RCV+ IQVKPP SDC S+LS W+H K+GLVD+ LKQCW+ G++F FHH+SHEQ Sbjct: 27 RKPLVQLPALQQQPRTPE--IVSEHEALIRKLLSKPFKVPIPNYQGILGGRFLGIGRNRCRCALHDPSEPGALILYEPPEFTAHDKLKMDLDKQPVHVVVDPSLSNVLRPHQREGVKFMYECVTGQRIPGSYGCIMADEMGLGKTLQCITLMWTLLKQGSDCKPTIDKAIVVAPSSLVKNWYNEINKWLCGRVNVLVIDSSSKDKIDRDLEGFMQTYSRRPVNPILVISYETFRLHASVLHKSEVGLVLCDEGHRLKNSENQTYQALMGLNAKRRVLLSGTPIQNDLLEYYSLVHFVNQGILGTAQEFRRKFETPILRGQDAMATLEERQKGQSCLDELAAIVNRCLIRRTSALLSKYLPVKIEQVVCIRLTDIQQKMYSKFIASDAIRRTVQGERSGKVSLSALSAITTLKKLCSHPDLVFEKMEAGDDGFEGALSLLPEKYN-TRKVIMPELSGKLAVLDCLLAVVKATTQDKVVLVSNYTQTLDLFERLSKHRGYQYVRLDGSMTIKKRAKVVEKFNDPLSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQCKQCYIYRFLCTGTIEEKIFQRQAHKKALSSSVVDNEEDVARHFSLADLRDLFKLETDTLSDTHNKFQCTRCVNRIQVKPPPEGSDCTSDLSCWNHCADKRGLVDLVLKQCWDVGISFVFHHRSHEQ 722
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|242021397|ref|XP_002431131.1| (conserved hypothetical protein [Pediculus humanus corporis] >gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 1029.24 bits (2660), Expect = 0.000e+0 Identity = 496/708 (70.06%), Postives = 579/708 (81.78%), Query Frame = 0 Query: 60 EKRKPLENIGNVTYMSLLPESPTT----SNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVK--MTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAG-VTFAFHHKSHEQ 760 E RKPL I + SL+ + + S+HE IR++L+KPFK+PIPNYQ R LGIRR+G R+ LHDP E NAL+L+ PPE S H+KLK +S + V VVVDP+L+ VLRPHQREGVKFMYDCVTG +I + +GCIMADEMGLGKTLQCITLMWTLLKQ PDC PLIEKAIVVAPSSLVKNW NEINKWL GRV+ L IDSGSK DIDRNL FMNT+ RRPVNPILIISYETFRLH KVLH+ EVGLVLCDEGHRLKN ENQTYQALM L A+RRVLLSGTPIQNDLLEYFSL+HFVN+GILGTA+EFRK+FE PILRG+DA++ ++ KKG E L ++A++VNRC+IRRT ALLSKYLPVK EQVIC LT LQ+ +YE F+ SD ++++++ + K M+ ++L+AIT+LKKL NHPDL++E+ + EGFENA +Y PE Y+ R P +SGKL LD LLA +KA+T+DK+VLVSNYTQTLDLFE+L R+Y+YVRLDGSMTIKKR KVV++FNDP S +FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK CFIYRLL+ GTIEEKIFQRQAHKKALSS VVD EEDV RHFS +LRDLFKLE T SDTHDKFKC RC++ IQ+KPP +DC S+LS WHH KKGLVD LK+CWE+G ++F FHH SH Q Sbjct: 38 EVRKPL--ISTQKFPSLINQMTCSFENVSSHEDFIRKILSKPFKIPIPNYQGGYNCRALGIRRNGGRRALHDPDEPNALILFSPPEFSAHEKLKTNSEEQLVHVVVDPMLSNVLRPHQREGVKFMYDCVTGVKIENAYGCIMADEMGLGKTLQCITLMWTLLKQGPDCKPLIEKAIVVAPSSLVKNWYNEINKWLKGRVNALAIDSGSKDDIDRNLQSFMNTYSRRPVNPILIISYETFRLHVKVLHKGEVGLVLCDEGHRLKNHENQTYQALMGLNAKRRVLLSGTPIQNDLLEYFSLIHFVNQGILGTAAEFRKKFEIPILRGQDANSTIEERKKGQECLEQMAALVNRCLIRRTAALLSKYLPVKTEQVICITLTGLQKQLYEDFIASDALKKTVREEKNSKKGMSLTALSAITTLKKLCNHPDLVYENIMKQTEGFENALKYLPEKYDIKNVR--PEMSGKLMFLDTLLALIKATTNDKIVLVSNYTQTLDLFEKLSRFRNYQYVRLDGSMTIKKRGKVVEKFNDPESKDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSTVVDNEEDVARHFSRDELRDLFKLETGTQSDTHDKFKCTRCMNKIQIKPPPEGTDCTSDLSLWHHCYDKKGLVDPLLKKCWESGIISFVFHHNSHIQ 741
BLAST of dna repair and recombination protein rad54-like vs. nr
Match: gi|1242735749|ref|XP_022344276.1| (DNA repair and recombination protein RAD54-like [Crassostrea virginica]) HSP 1 Score: 1025 bits (2649), Expect = 0.000e+0 Identity = 500/752 (66.49%), Postives = 588/752 (78.19%), Query Frame = 0 Query: 11 RRSAAPSAVAKRLSWLQSPSTPIHHTSSGRACKRT--RVQFDDSDEEEEEAEKRKPLENIGNVTYMSLLPESPTTSNHERLIRRLLNKPFKVPIPNYQPSGYGRCLGIRRSGARQPLHDPLEDNALVLYEPPEVSEHDKLKADSGQNPVPVVVDPILTRVLRPHQREGVKFMYDCVTGCRIPDTHGCIMADEMGLGKTLQCITLMWTLLKQSPDCTPLIEKAIVVAPSSLVKNWANEINKWLGGRVSCLTIDSGSKSDIDRNLNGFMNTFGRRPVNPILIISYETFRLHAKVLHQSEVGLVLCDEGHRLKNSENQTYQALMQLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTASEFRKRFENPILRGRDADALADDIKKGTEKLAELASVVNRCIIRRTQALLSKYLPVKYEQVICCKLTPLQESIYESFVTSDTVRRSLKGSEGVKMTSSSLAAITSLKKLVNHPDLIFEHCRDRKEGFENAFQYYPEAYNPSKQRLQPALSGKLSILDCLLAFVKASTSDKVVLVSNYTQTLDLFERLCALRSYRYVRLDGSMTIKKRAKVVDQFNDPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKECFIYRLLAVGTIEEKIFQRQAHKKALSSCVVDREEDVERHFSVADLRDLFKLEKNTASDTHDKFKCRRCVSGIQVKPPAPDSDCNSNLSQWHHSTSKKGLVDMALKQCWEAGVTFAFHHKSHEQ 760 RRS APS Q S PI S + K R ++DD EE+E R PL I N S + +P HE I+++L+KPFK+PIPNY+ GR LGIRR G RQPLHDP E+ AL+LY PPE+S H++LKAD + PV VVVDP+L++VLRPHQREGVKFMYDCVTG RIPD GCIMADEMGLGKTLQCITLMWTLL+QSPDC PLI+K IVV PSSLVKNW NE KWL GRV+CL IDSG KS+IDR LN FM GRR +PILIISYETFRLH+ V+H+ EVGLV+CDEGHRLKNSENQTY+AL L+ARRRVLLSGTPIQNDLLEYFSLVHFVN GILGTA EF++RFE PILRGRDADA +D +KG EKL ELA VVNRCIIRRTQALL++YLPVK EQ++CC+LT +Q +Y+ V S + + + K +SS+L+ IT LKKL NHPDLI++ C + G+E +P N + + ++P LSGK+ +LD LLA +KA TSDKVVLVSNYTQTLDLF+ LC R Y YVRLDGSMTIKKRA+VV++FN+P+SPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR WRDGQ+K+CFIYRL+A GTIEEKIFQRQ HKKALSSCVVD+EEDV+RHFS LRDLFKL ++T SDTHDKFKC+RCV+ IQV+ P SD NS+LSQW+H+ +KGLVD+ LK W+ ++F FHH+SHE+ Sbjct: 2 RRSQAPS---------QRFSIPISSQKSDQQVKPVVKRARYDDQKEEDE----RTPLSTITN----SPMVRNPDAKAHEDFIKKILSKPFKIPIPNYKGPLVGRVLGIRRQGTRQPLHDPAEEGALILYSPPELSAHEQLKADLDRQPVHVVVDPVLSKVLRPHQREGVKFMYDCVTGQRIPDNFGCIMADEMGLGKTLQCITLMWTLLRQSPDCCPLIDKVIVVTPSSLVKNWYNEAQKWLSGRVNCLAIDSGIKSEIDRQLNQFMQLSGRRNPHPILIISYETFRLHSAVMHKGEVGLVICDEGHRLKNSENQTYRALNGLRARRRVLLSGTPIQNDLLEYFSLVHFVNGGILGTAQEFKRRFETPILRGRDADASDEDHRKGQEKLQELADVVNRCIIRRTQALLTRYLPVKVEQIVCCRLTQMQSELYQLLVRS----KGFEVEQEEKSSSSTLSFITQLKKLCNHPDLIYDKCLENAPGYEGTLSLFPP--NHTTKVVRPELSGKVLVLDRLLALIKAQTSDKVVLVSNYTQTLDLFQTLCHQRRYLYVRLDGSMTIKKRAQVVEKFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARCWRDGQRKQCFIYRLIATGTIEEKIFQRQTHKKALSSCVVDKEEDVQRHFSREMLRDLFKLREDTNSDTHDKFKCKRCVNNIQVRAPPEGSDTNSDLSQWYHAADRKGLVDVVLKGAWDQTISFTFHHRSHEE 730 The following BLAST results are available for this feature:
BLAST of dna repair and recombination protein rad54-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
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BLAST of dna repair and recombination protein rad54-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of dna repair and recombination protein rad54-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1491_size38540:23434..32670- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1491_size38540-snap-gene-0.12 ID=maker-scaffold1491_size38540-snap-gene-0.12|Name=dna repair and recombination protein rad54-like|organism=Tigriopus kingsejongensis|type=gene|length=9237bp|location=Sequence derived from alignment at scaffold1491_size38540:23434..32670- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dna repair and recombination protein rad54-like' has the following synonyms
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