60s ribosomal protein l21, maker-scaffold1526_size37455-snap-gene-0.11 (gene) Tigriopus kingsejongensis

Overview


Name	60s ribosomal protein l21
Unique Name	maker-scaffold1526_size37455-snap-gene-0.11
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Match: EMLSAG00000012017 (supercontig:LSalAtl2s:LSalAtl2s856:144245:145062:1 gene:EMLSAG00000012017 transcript:EMLSAT00000012017 description:"maker-LSalAtl2s856-augustus-gene-1.29")

HSP 1 Score: 283.878 bits (725), Expect = 5.821e-97
Identity = 131/161 (81.37%), Postives = 142/161 (88.20%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMF+R YK KGV+HLSTYL+CYK GDIVDIKGNGAFQKGMPHKSYHGKTGRVFNV+KHAVGV+VNKRVKGRIL KRISVRIEHV HSKCR DFL RVKANE  K  AK+ G+  P+ KR A+QPI  H VSA+DN+PQFLAPIPYEFVA
Sbjct:    1 MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSKCRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQFLAPIPYEFVA 161

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|15214245|sp|Q9UUC1.1|RL21A_SCHPO (RecName: Full=60S ribosomal protein L21-A)

HSP 1 Score: 171.014 bits (432), Expect = 2.337e-51
Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYE 355
            M +  G R  TR  F R ++  G   LSTYLK YK GDIVDIK NGA QKGMPHK YHGKTG V+NV + +VGV++ K V  R + KR++VRIEHV HSKCR DFL RVKANE K++EAK  G++    +R+   P  AH VS ++N+P  L P+ Y+
Sbjct:    1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTV-QLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|6094029|sp|O82574.1|RL21_CYAPA (RecName: Full=60S ribosomal protein L21)

HSP 1 Score: 151.369 bits (381), Expect = 1.035e-43
Identity = 78/158 (49.37%), Postives = 98/158 (62.03%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYE 355
            M +  GYR  TR +F+RA+KT G  HLSTYL  +K G+ VD+ GN A  KGMP K YHG+TG V+NV K A+GV +NKRV+ RI+ KRI VRI+HV  S CR  FL RVK N+  K +A  A    P  KR    P    ++ +K   P+    IPYE
Sbjct:    1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|75170010|sp|Q9FDZ9.1|RL212_ARATH (RecName: Full=60S ribosomal protein L21-2)

HSP 1 Score: 142.895 bits (359), Expect = 2.303e-40
Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 0

Query:  203 GYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFV 357
            G R  TRD+F+R ++ KG   LSTYL+ +K GD VD+K NGA  KGMPHK YHG+TGR++NV K AVGV VNK++  RI+ KRI VR+EHV  S+C  +F  R K N+V K +AK  G++    KR+ + P    +V     +   + PIPY+ V
Sbjct:    6 GVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETI-STKRQPKGPKPGFMVEGMTLET--VTPIPYDVV 157

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|2851508|sp|Q43291.2|RL211_ARATH (RecName: Full=60S ribosomal protein L21-1)

HSP 1 Score: 139.043 bits (349), Expect = 7.004e-39
Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 0

Query:  203 GYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFV 357
            G R  TRD+F+R ++ KG   LSTYL+ +K GD VD+K NGA  KGMPHK YHG+TGR++NV K AVGV VNK++  RI+ KRI VR+EHV  S+C  +F  R K N+  K  AK  G++    KR+ + P    +V     +   + PIPY+ V
Sbjct:    6 GVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETI-STKRQPKGPKPGFMVEGMTLET--VTPIPYDVV 157

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|74856344|sp|Q54X53.1|RL21_DICDI (RecName: Full=60S ribosomal protein L21)

HSP 1 Score: 130.183 bits (326), Expect = 1.464e-35
Identity = 68/160 (42.50%), Postives = 95/160 (59.38%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFV 357
            M +  G R  TR +FSR ++  G+   +T+L+ ++ GD VDIK  G   KGMPHK YHG+TGRV+NV   AVGVI+NKRV  RI+ K+I VR EHV  S      L R++ N+    EAKKAG+   D +R    P     V+ ++ +   + P+ YE +
Sbjct:    1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAKKAGKWV-DVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|121980453|sp|Q23TC8.3|RL21_TETTS (RecName: Full=60S ribosomal protein L21)

HSP 1 Score: 127.487 bits (319), Expect = 1.330e-34
Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGA 336
            MT+  GYRR TR  F++AYKTKG   +S YL  YK G+ VDI  +G+  KGMP+K YHG+TG+VFNV   ++GVIV++ V GR + KR+ V+IEHV  S  +T    R +AN+  K E  KAG+     KR   QP+ A
Sbjct:    1 MTHSYGYRRQTRKKFAKAYKTKGHVRISRYLTTYKVGEYVDIMVDGSQHKGMPYKLYHGRTGKVFNVNPRSIGVIVHRIVNGRYIEKRLHVKIEHVRPSNVKTALSKRYQANDQAKAEGNKAGKRV-STKRNPGQPLEA 138

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|51701823|sp|Q8SRW8.1|RL21_ENCCU (RecName: Full=60S ribosomal protein L21)

HSP 1 Score: 124.405 bits (311), Expect = 2.210e-33
Identity = 66/145 (45.52%), Postives = 91/145 (62.76%), Query Frame = 0

Query:  202 KGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQP 346
            KGYRRGTR +FS+ ++  GV H+S YL+ Y+ GD+VDI  N A  KGMPHK YHG+TGRV++V   ++ V + KRV+G+ + K+I VRIEHV  S+C  +   R+        +A+  G      KR+ E P  A  VS  +NQP
Sbjct:    4 KGYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPRKAVEVSLDNNQP 148

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|1350689|sp|P38653.2|RL21_ENTHI (RecName: Full=60S ribosomal protein L21)

HSP 1 Score: 117.857 bits (294), Expect = 8.790e-31
Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 0

Query:  203 GYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKA-NEVKKEEAKKAGQSAP----DCKRRAEQPIGAHLVSAKDNQPQFLAPIPYE 355
            G  R TR +F R ++  G+ + ST L  YK GD V I  N + Q G+P+K++HGKTGRV+NV  HA+GV+VNK+V  RI+ KR+ +  EH+  S C+ DFL R  A   ++K+  +   +  P      KR  +QP  A L+   D +   +AP+ +E
Sbjct:    6 GRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPLLPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220819|sp|A3DML6.1|RL21_STAMF (RecName: Full=50S ribosomal protein L21e)

HSP 1 Score: 60.4622 bits (145), Expect = 1.898e-10
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0

Query:  201 PKGYRRGTRDMFSRAYKTKG-VQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297
            P+GYR  TR +FS+  + KG V  LS  +  YK GD V I  N A  KGMPH+ YHGKTG +  + K     IV   +  +   K + +R EH+  +K
Sbjct:    5 PRGYRHRTRKVFSKHIREKGAVPPLSLLMIDYKPGDKVHIVVNPAIHKGMPHRRYHGKTGTI--IGKRGKAYIVKITLGDK--EKTLFIRPEHLRPAK 98

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BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|73914082|sp|Q6M125.1|RL21_METMP (RecName: Full=50S ribosomal protein L21e)

HSP 1 Score: 58.151 bits (139), Expect = 1.109e-9
Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297
            M   +G+R  TR    +  + KG+  L+  LKCY  GD+V +  + + QKGMPH  +HGKTG V  VA+     +V  +  G+   K I  R +H+  SK
Sbjct:    1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLRESK 96

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|225713206|gb|ACO12449.1| (60S ribosomal protein L21 [Lepeophtheirus salmonis] >gi|290563133|gb|ADD38960.1| 60S ribosomal protein L21 [Lepeophtheirus salmonis])

HSP 1 Score: 283.878 bits (725), Expect = 5.452e-93
Identity = 131/161 (81.37%), Postives = 142/161 (88.20%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMF+R YK KGV+HLSTYL+CYK GDIVDIKGNGAFQKGMPHKSYHGKTGRVFNV+KHAVGV+VNKRVKGRIL KRISVRIEHV HSKCR DFL RVKANE  K  AK+ G+  P+ KR A+QPI  H VSA+DN+PQFLAPIPYEFVA
Sbjct:    1 MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSKCRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQFLAPIPYEFVA 161

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961375766|gb|ALS04627.1| (60S ribosomal protein L21 [Pseudodiaptomus poplesia])

HSP 1 Score: 259.61 bits (662), Expect = 1.798e-83
Identity = 123/161 (76.40%), Postives = 137/161 (85.09%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNP GYRRGTRDMFSRA+K +GV+HLSTYLK YK GDIVD+KG GAFQKGMPHK+YHGKTGRVFNV+KHAVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK  G S   CKR   QP  AH+VS KDN PQ L P+PYEF+A
Sbjct:    1 MTNPTGYRRGTRDMFSRAHKKRGVEHLSTYLKTYKIGDIVDVKGCGAFQKGMPHKAYHGKTGRVFNVSKHAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKATG-SGVICKRFPAQPREAHVVSTKDNVPQVLGPVPYEFIA 160

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961376280|gb|ALS04884.1| (60S ribosomal protein L21 [Pseudodiaptomus poplesia])

HSP 1 Score: 258.07 bits (658), Expect = 7.488e-83
Identity = 123/161 (76.40%), Postives = 136/161 (84.47%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNP GYRRGTRDMFSRA+K +GV+HLSTYLK YK GDIVD KG GAFQKGMPHK+YHGKTGRVFNV+KHAVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK  G S   CKR   QP  AH+VS KDN PQ L P+PYEF+A
Sbjct:    1 MTNPTGYRRGTRDMFSRAHKKRGVEHLSTYLKTYKIGDIVDAKGCGAFQKGMPHKAYHGKTGRVFNVSKHAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKATG-SGVICKRFPAQPREAHVVSTKDNVPQVLGPVPYEFIA 160

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961375184|gb|ALS04336.1| (60S ribosomal protein L21 [Acartia pacifica])

HSP 1 Score: 258.07 bits (658), Expect = 9.412e-83
Identity = 121/161 (75.16%), Postives = 135/161 (83.85%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMFSR YK  GVQHLSTYLK YK GDIVD+KG GAFQKGMPHKSYHGKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK +G++   CKR    P   H+VS KDN PQ + P+PYEF+A
Sbjct:    1 MTNPKGYRRGTRDMFSRGYKKNGVQHLSTYLKTYKMGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKRAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLGRVHSNEVKKKEAKASGETV-ICKRLPVGPRPGHVVSTKDNAPQIIGPVPYEFIA 160

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961375182|gb|ALS04335.1| (60S ribosomal protein L21 [Acartia pacifica] >gi|961375186|gb|ALS04337.1| 60S ribosomal protein L21 [Acartia pacifica])

HSP 1 Score: 257.684 bits (657), Expect = 1.158e-82
Identity = 121/161 (75.16%), Postives = 135/161 (83.85%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMFSR YK  GVQHLSTYLK YK GDIVD+KG GAFQKGMPHKSYHGKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK +G++   CKR    P   H+VS KDN PQ + P+PYEF+A
Sbjct:    1 MTNPKGYRRGTRDMFSRGYKKNGVQHLSTYLKTYKMGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKRAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKASGETV-ICKRLPVGPRPGHVVSTKDNAPQIIGPVPYEFIA 160

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961376098|gb|ALS04793.1| (60S ribosomal protein L21 [Pseudodiaptomus poplesia])

HSP 1 Score: 256.144 bits (653), Expect = 4.138e-82
Identity = 122/161 (75.78%), Postives = 135/161 (83.85%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNP GYRR TRDMFSRA+K  GV+HLSTYLK YK GDIVD+KG GAFQKGMPHK+YHGKTGRVFNV+KHAVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK  G S   CKR   QP  AH+VS KDN PQ L P+PYEF+A
Sbjct:    1 MTNPTGYRRSTRDMFSRAHKKWGVEHLSTYLKTYKIGDIVDVKGCGAFQKGMPHKAYHGKTGRVFNVSKHAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKATG-SGVICKRFPAQPREAHVVSTKDNVPQVLGPVPYEFIA 160

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961375188|gb|ALS04338.1| (60S ribosomal protein L21 [Acartia pacifica])

HSP 1 Score: 255.373 bits (651), Expect = 8.306e-82
Identity = 120/161 (74.53%), Postives = 135/161 (83.85%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMFSR YK  GVQHLSTYLK YK GDIVD+KG GAFQKGMPHKSY+GKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK +G++   CKR    P   H+VS KDN PQ + P+PYEF+A
Sbjct:    1 MTNPKGYRRGTRDMFSRGYKKNGVQHLSTYLKTYKMGDIVDVKGCGAFQKGMPHKSYYGKTGRVFNVSKRAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKASGETV-ICKRLPVGPRPGHVVSTKDNAPQIIGPVPYEFIA 160

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961376066|gb|ALS04777.1| (60S ribosomal protein L21 [Pseudodiaptomus poplesia])

HSP 1 Score: 251.906 bits (642), Expect = 1.889e-80
Identity = 120/161 (74.53%), Postives = 133/161 (82.61%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            M NP GYRRGTRDMFSRA+K KGV+HLSTYLK YK GDIVD+KG GAFQKGMPHKSYHGKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV ANEVKK E K  G +   CKR   +P   H+VS KDN+PQ + PIPYEF+A
Sbjct:    1 MVNPTGYRRGTRDMFSRAHKKKGVEHLSTYLKNYKIGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKQAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHANEVKKTEQKTTGATV-VCKRFPFEPRPGHVVSTKDNEPQVIGPIPYEFIA 160

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1325278896|ref|XP_023324089.1| (60S ribosomal protein L21-like [Eurytemora affinis])

HSP 1 Score: 248.44 bits (633), Expect = 5.633e-79
Identity = 120/161 (74.53%), Postives = 130/161 (80.75%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            M NP GYRRGTRDMFSR YK  GV+HLSTYLK YK GDIVD+KG GAFQKGMPHKSYHGKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV  NEVKK E K  G+   +CKR    P  AH VS KDNQPQ + PIPYEF+A
Sbjct:    1 MVNPTGYRRGTRDMFSRGYKKGGVEHLSTYLKNYKIGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKQAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHTNEVKKREQKVTGKLV-ECKRFPLAPRPAHTVSTKDNQPQDIGPIPYEFMA 160

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BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|166952301|gb|ABZ04233.1| (ribosomal protein rpl3 [Lineus viridis])

HSP 1 Score: 238.81 bits (608), Expect = 2.875e-75
Identity = 114/161 (70.81%), Postives = 128/161 (79.50%), Query Frame = 0

Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTR MFSR +K KGV HLS YLKCY+ GDIVDIKG+GA QKGMPHKSYHG+TGRV+NV +HAVGVIVNKRV+G+IL KRI++RIEHV HS CR DFL+RVK NEV K EA+  G   P+CKR  + P  AH V  K N PQ   PIPYEFVA
Sbjct:    1 MTNPKGYRRGTRYMFSRQFKKKGVTHLSKYLKCYRRGDIVDIKGDGAIQKGMPHKSYHGRTGRVYNVTQHAVGVIVNKRVRGKILAKRINLRIEHVKHSNCRLDFLNRVKRNEVIKREARVKG-VKPECKRLPQGPKKAHFVRTKGNLPQVFEPIPYEFVA 160

The following BLAST results are available for this feature:

BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
BLAST of 60s ribosomal protein l21 vs. SwissProt
BLAST of 60s ribosomal protein l21 vs. nr

BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000012017	5.821e-97	81.37	supercontig:LSalAtl2s:LSalAtl2s856:144245:145062:1...	[more]

BLAST of 60s ribosomal protein l21 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|15214245\|sp\|Q9UUC1.1\|RL21A_SCHPO	2.337e-51	54.43	RecName: Full=60S ribosomal protein L21-A	[more]
gi\|6094029\|sp\|O82574.1\|RL21_CYAPA	1.035e-43	49.37	RecName: Full=60S ribosomal protein L21	[more]
gi\|75170010\|sp\|Q9FDZ9.1\|RL212_ARATH	2.303e-40	48.39	RecName: Full=60S ribosomal protein L21-2	[more]
gi\|2851508\|sp\|Q43291.2\|RL211_ARATH	7.004e-39	47.74	RecName: Full=60S ribosomal protein L21-1	[more]
gi\|74856344\|sp\|Q54X53.1\|RL21_DICDI	1.464e-35	42.50	RecName: Full=60S ribosomal protein L21	[more]
gi\|121980453\|sp\|Q23TC8.3\|RL21_TETTS	1.330e-34	48.92	RecName: Full=60S ribosomal protein L21	[more]
gi\|51701823\|sp\|Q8SRW8.1\|RL21_ENCCU	2.210e-33	45.52	RecName: Full=60S ribosomal protein L21	[more]
gi\|1350689\|sp\|P38653.2\|RL21_ENTHI	8.790e-31	39.87	RecName: Full=60S ribosomal protein L21	[more]
gi\|166220819\|sp\|A3DML6.1\|RL21_STAMF	1.898e-10	40.82	RecName: Full=50S ribosomal protein L21e	[more]
gi\|73914082\|sp\|Q6M125.1\|RL21_METMP	1.109e-9	37.00	RecName: Full=50S ribosomal protein L21e	[more]

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BLAST of 60s ribosomal protein l21 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225713206\|gb\|ACO12449.1\|	5.452e-93	81.37	60S ribosomal protein L21 [Lepeophtheirus salmonis...	[more]
gi\|961375766\|gb\|ALS04627.1\|	1.798e-83	76.40	60S ribosomal protein L21 [Pseudodiaptomus poplesi...	[more]
gi\|961376280\|gb\|ALS04884.1\|	7.488e-83	76.40	60S ribosomal protein L21 [Pseudodiaptomus poplesi...	[more]
gi\|961375184\|gb\|ALS04336.1\|	9.412e-83	75.16	60S ribosomal protein L21 [Acartia pacifica]	[more]
gi\|961375182\|gb\|ALS04335.1\|	1.158e-82	75.16	60S ribosomal protein L21 [Acartia pacifica] >gi\|9...	[more]
gi\|961376098\|gb\|ALS04793.1\|	4.138e-82	75.78	60S ribosomal protein L21 [Pseudodiaptomus poplesi...	[more]
gi\|961375188\|gb\|ALS04338.1\|	8.306e-82	74.53	60S ribosomal protein L21 [Acartia pacifica]	[more]
gi\|961376066\|gb\|ALS04777.1\|	1.889e-80	74.53	60S ribosomal protein L21 [Pseudodiaptomus poplesi...	[more]
gi\|1325278896\|ref\|XP_023324089.1\|	5.633e-79	74.53	60S ribosomal protein L21-like [Eurytemora affinis...	[more]
gi\|166952301\|gb\|ABZ04233.1\|	2.875e-75	70.81	ribosomal protein rpl3 [Lineus viridis]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1526_size37455	supercontig	scaffold1526_size37455:11277..15946 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	C:ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold1526_size37455-snap-gene-0.11-mRNA-1	maker-scaffold1526_size37455-snap-gene-0.11-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1526_size37455:11277..15946-

gene from alignment at scaffold1526_size37455:11277..15946-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1526_size37455-snap-gene-0.11 ID=maker-scaffold1526_size37455-snap-gene-0.11|Name=60s ribosomal protein l21|organism=Tigriopus kingsejongensis|type=gene|length=4670bp|location=Sequence derived from alignment at scaffold1526_size37455:11277..15946- (Tigriopus kingsejongensis)
ATGACTGCGGCCAGCACTTTGCATCAAACCCAACTCCAGGTTCGCCAGCA
GCTCGAGGCCAACTGCGCCCAACTGCGGCAATTGAAGGAGTTGAGCAATG
ACTTGGAAGCTCAATCTCGTGATGCCACTGGACGACGTCTCCACCGGGAA
TGGACGGAAAAGCTACGCACGTCCAAGTCGGTCCACGATATGCAGCAGAG
CAAGGAGGAGGAATACCGGGCTGCGGCAGTTCAAGACCAGGCGGTCTGTG
GGCGGCGCGACCATCTGCGGGCGGCGATCAAGACGGCTCAAGAGGCGCTG
AGCGGCCTCAGAAGTCTGGGTGGGATCGAATTGAATCGGGTTTTTGCCCA
GCGGGTACATTTAACTTACTTGGCCCTCTCGGATGCGGCTCTGGAAGACT
TGATAAATTCGGAAATGGGTCCTTCCCCCGAATTGGAGGCCCAACTGATC
GAATTTCAAAGGAAGAGGGACTGTGCAGTCCAAGAGCTGGATCAATTGGA
GTCTGGTGAGGAGTTGGATGCAATCATGGCCGAGATTGAGCGACTTCAGA
AGCTAAAGGTGGAGCAACAGGGCCAGTTAGATCAATTGTCGGCCGAAAAT
TGCCAGCTGCGAAGCGCTTTGGAACGACACTGAGATTAAATTTCGCCGTC
AAACGTAAGATCTCTGGAGTGAAGACTCGATACGTGCCAAATTTTGAGTG
TACGAATAAATTCACGTTGGTATTCAATAGCCTCTTCCCGTCATGAAATA
CTTGAGGTTGATCAAAAGATGATCACTGATCTGTACGCTGGAAAAAACTT
TTCGCCGCTTTTTTTCGCGGTGTGTGTTGGAAATAATGGGAAATGCTACT
AATAGTCTTAAATGCTGGAAATGGTCTGAAATGCTGGTAATAAGCTGATT
TCCTGAAGAAAGGACTGATTTCAGCCAGTGACTGATGGCACAAACTTCAA
AATGGTGAACATCTTAAAACTAGAGTCCAAACTACTTACAGAACACAATG
GGTTCAAGCCGGATTGAATTGAAATTCAGCCGAACTTTTTTGCTTCGTTT
TACCAAAGTCAAGGGGTGTCAACTTTTCTGCAATTAACCAAGGCAAGCAT
ATGCGCATTTGAAACGCACTTCCAATTGACACCATTGTTGAAATATTGGG
TGGTTTTCCCAGATCCATGAATGTTTTTCCTACAATTGTATGTTCCTCGT
CATTGGTAACTGCGTGCGTGTCGCATTATCGGCCAGTTGTGAAAATATCG
GTTGCCACTATTTTCTTTCCAGTTCTTTAACCTTCGATATATACAAACAT
AGCCTGTAAAAAGAAATAGGTCTTAAATTGAAGTCTACCAATGAATTTCC
TTTCATTTTGTGGTGCATCTAGTCAGTATTTTCGATTATTTTCATTTAGA
AAATTGCTTGGATTTCCTCAAATGCGAATTTATTTTAATTATATTTATCT
AAATATGCAAGTTGATATTTAGTCCCCCCCAAAAGCATATCGAATGTTTT
GTTTTTTGATATCGTTTCACGAGTTCCTTCGTTTCTTAAAAGGCGTTTTC
CTCCTATGATTAGCTATTTTTGGGGTTTCACTCTTTTCATTTGCTGGAAA
TCTGTTTTTTTGTTTAATTGCTGTTTTTTTGCTGGACACGTCATTTTTTC
GGCTGTTTCCACAGTTTTTGGGGGCAATTTTTATTGTTTTTTTTACAGCC
CTACTAATTAGGATAACCATGCATATTCTCAAACGACTTCTAGTCGCACT
CAATTGGGTGCCCTCCAATCCAGCGGGTTTGATACATTTATGACTACGAA
TCAATAATAAGCAGTTGAATATCCAAAAATAAACCAATTTTCGATCAGCG
TTGACTGATTGGTTCAAGTGGTTGTGAAGCAGGTGGCAAATTCCAAACAT
ATGTAGTTATTGAACCACCTGGTTCACCAACTTCTTATGTATGTACATAG
TAGAGGCAAGGCTCGAAGCCTGTCACTCGACTCTGTTCATCGACAAGTGG
CGAACCCAAACAATATATCACTCTATAAAGGACTCTGAATCGCCCTGTGG
GTGATCAATCGAACGAATCAAGCGTGTGTGCACTCGGCCCGCAGGATAAA
TTATTACATAGCATTCTGTAGCTATACATGACCTAACTGGTGAATATTCT
AGGTTGGTACTATGGCCATTTGCGAGACGGTTATTCCAGTCAATTGACTG
AAAACTGACCCCAGTTGACCAGAAAAAGCACTGCCACGTTTCTAGTCACG
CATAGGTTTTTTTTAGAGGATTAGGGGTCTTTTTAACTCCATGCCCAGAT
TGACCAAACCTATGGAAATATATGGAATGCTCCGAAGTTGTTAACGATTG
AATGATTGGTGTGTTATCAGCTATATATTTGCAAGAAGTCATGTTGGTGA
AATGTCGAGTACAAAAATTAGCCAATTTGGCTAGTCACGAAGCACAGACG
ACTTTCATTTGGCTTCTCATCTTTTATCACATTTGAGTTTCAGATTGTTA
GCAATTGCTGCTGACTTGTTTTGGGTTTGCTTCCTCACAATTTGGGGCCG
GATTTCGGCTTCCAAAGGCCTGAACCTTAGATTGATGCCAATGCCGCGAT
TCCACGAGCCACGGATTTGGCCTCGTTCTTCGTGGTGGCTGCCCCCCTCA
GGGCTGGAAAGAGGTTCCACAACTTGATGCCATAGTCTGCTAGTGTGTTG
GCGGTTTTGAGCGGGTTTGGTGGCCCATAGCACCCAGCCGCTCATAGCAA
TACAGTATATTGTTGTCACGTAAGAATGACTCGTTTCAGTATAAGCCAAT
GTTAACACTTATGGCCGCCCTTGAATCAATAACTTTGATACAATAACTTT
GATACAATAACTTTGATACAATAACTTTGATACAATAATTATGATACAAT
AATTATGATACAATAACTTTGTTACAATAATTTTGATACAATAACTTTGA
TACAATAACTTTGATACAATCTCTTTGATGCAATCCCTCTGATACAATCC
CTTTGATACAATCCCTTTGATACAATCCCTGTGATACAATCCCTGTTATA
CACTCCCTTTGATACAATAACTTTGATACAATCTCTTTGATGCAATCCCT
CTGATACAATCCCTGTGATACACTCCCTTTGATACAATCACTTTGATACA
ATCTCTTTGAATTAGTATCTTGAATCAACAATGATTGGCGAGCAAGCAGA
GGGAAGCCCATCTGAAGTGCTGCAACCCCACTTTAATCCCAGACACTCCT
GGGTGGATGTGTGTGTAATCCTGTATTCCTACATAATTGAAATCGGTTTA
TACCCGGGAGTCAACACTTAGCCAACGAATGCTAATCAATCGTGTTAGGG
CCATTTATAAGAATATATGTACACATATGAAGAGGTAACGCAAAATAAAC
ATAACTGCAGAAACATAACAACATTACAGCAAACTATGCAAAACAAGACA
ACATAATAGTGGAAAAGCACAATAAATGTTTACGAGCCAATACAGATCAA
TAAATGCATTCAGAATAAAACCATACACAATAAATAATAGCGAAACTTGA
CCAAACAATCGATGTTGACAAAACTATACCAAACAGAGAAGAACACATTA
TCGCCCGATGTATAAGTATAAATGCGTAGCATTAGGTCAATGGAAATCGG
ACCCCGATTCCCATAAGAGCTCAATGTTGAATGGCCCGAGGGGTGTAATG
TACACACGCTCAGAGAAGAGCCCAGAATCGGAACTTTTTCAGGACTTTTT
CCACTCAAAAGGAGAGGCCATTAGTCCCGAGCTTGCGTGAGTCCAAAGAC
CTCCGTTTCCGTCCACGGCGATTTTCTCATGACTTTGTGTGTCTTTCCCT
CAGCTCAACTTCTTCCTTTTCCGCTTGGAGCGCCGTTCAGGTAAGACCGA
ATTCAATATTTCCTAGCCCGATTTGCGTTCAGCCCGCCGAGGTGAGTGCC
CCTCGGATTGAATTGAGAGGCTCAGCGGTGAGCTGAGCCACTTCCGGAGC
CGAGTGGAACCATCCGGGGCGTGTAGGGAGGCGTTTTGACCCGGGTCTAT
TCTTTGCAGTCCAGAGCCGATCGCCCCACTCCACCTTTCATCATGACTAA
TCCCAAGGGTTATCGTCGCGGTACCCGCGACATGTTCTCCCGGGCCTACA
AGACCAAGGGCGTGCAGCACTTGTCCACTTACCTCAAGTGCTACAAGACC
GGCGACATTGTGGACATCAAGGGCAACGGCGCCTTCCAGAAGGGCATGCC
CCACAAGTCCTACCACGGCAAGACTGGACGCGTGTTCAACGTGGCCAAGC
ACGCAGTCGGTGTGATCGTCAACAAGCGTGTCAAGGGACGCATCTTGCCC
AAGAGGATCTCCGTCAGGATCGAGCACGTGACCCACTCCAAGTGCCGTAC
CGACTTCTTGTCGCGCGTCAAGGCCAATGAGGTCAAGAAAGAGGAAGCCA
AGAAAGCCGGCCAGTCCGCTCCCGACTGCAAGCGACGGGTAAGAAGATTG
GGTCAGCGGGTCCAGGGACATGTCCATGACCTCGTCCGGTTTCTATTTCA
GGCTGAACAACCCATTGGTGCCCACTTGGTCAGCGCCAAGGACAACCAGC
CTCAGTTCCTGGCTCCCATTCCTTATGAATTCGTCGCCTAAGTTGGAAAT
AAAGATGGATGTGTACCTCA

Synonyms

The feature '60s ribosomal protein l21' has the following synonyms


Synonym
Tk00731

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