60s ribosomal protein l21, maker-scaffold1526_size37455-snap-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Match: EMLSAG00000012017 (supercontig:LSalAtl2s:LSalAtl2s856:144245:145062:1 gene:EMLSAG00000012017 transcript:EMLSAT00000012017 description:"maker-LSalAtl2s856-augustus-gene-1.29") HSP 1 Score: 283.878 bits (725), Expect = 5.821e-97 Identity = 131/161 (81.37%), Postives = 142/161 (88.20%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTNPKGYRRGTRDMF+R YK KGV+HLSTYL+CYK GDIVDIKGNGAFQKGMPHKSYHGKTGRVFNV+KHAVGV+VNKRVKGRIL KRISVRIEHV HSKCR DFL RVKANE K AK+ G+ P+ KR A+QPI H VSA+DN+PQFLAPIPYEFVA Sbjct: 1 MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSKCRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQFLAPIPYEFVA 161
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|15214245|sp|Q9UUC1.1|RL21A_SCHPO (RecName: Full=60S ribosomal protein L21-A) HSP 1 Score: 171.014 bits (432), Expect = 2.337e-51 Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYE 355 M + G R TR F R ++ G LSTYLK YK GDIVDIK NGA QKGMPHK YHGKTG V+NV + +VGV++ K V R + KR++VRIEHV HSKCR DFL RVKANE K++EAK G++ +R+ P AH VS ++N+P L P+ Y+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTV-QLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|6094029|sp|O82574.1|RL21_CYAPA (RecName: Full=60S ribosomal protein L21) HSP 1 Score: 151.369 bits (381), Expect = 1.035e-43 Identity = 78/158 (49.37%), Postives = 98/158 (62.03%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYE 355 M + GYR TR +F+RA+KT G HLSTYL +K G+ VD+ GN A KGMP K YHG+TG V+NV K A+GV +NKRV+ RI+ KRI VRI+HV S CR FL RVK N+ K +A A P KR P ++ +K P+ IPYE Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|75170010|sp|Q9FDZ9.1|RL212_ARATH (RecName: Full=60S ribosomal protein L21-2) HSP 1 Score: 142.895 bits (359), Expect = 2.303e-40 Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 0 Query: 203 GYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFV 357 G R TRD+F+R ++ KG LSTYL+ +K GD VD+K NGA KGMPHK YHG+TGR++NV K AVGV VNK++ RI+ KRI VR+EHV S+C +F R K N+V K +AK G++ KR+ + P +V + + PIPY+ V Sbjct: 6 GVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETI-STKRQPKGPKPGFMVEGMTLET--VTPIPYDVV 157
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|2851508|sp|Q43291.2|RL211_ARATH (RecName: Full=60S ribosomal protein L21-1) HSP 1 Score: 139.043 bits (349), Expect = 7.004e-39 Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 0 Query: 203 GYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFV 357 G R TRD+F+R ++ KG LSTYL+ +K GD VD+K NGA KGMPHK YHG+TGR++NV K AVGV VNK++ RI+ KRI VR+EHV S+C +F R K N+ K AK G++ KR+ + P +V + + PIPY+ V Sbjct: 6 GVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETI-STKRQPKGPKPGFMVEGMTLET--VTPIPYDVV 157
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|74856344|sp|Q54X53.1|RL21_DICDI (RecName: Full=60S ribosomal protein L21) HSP 1 Score: 130.183 bits (326), Expect = 1.464e-35 Identity = 68/160 (42.50%), Postives = 95/160 (59.38%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFV 357 M + G R TR +FSR ++ G+ +T+L+ ++ GD VDIK G KGMPHK YHG+TGRV+NV AVGVI+NKRV RI+ K+I VR EHV S L R++ N+ EAKKAG+ D +R P V+ ++ + + P+ YE + Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAKKAGKWV-DVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|121980453|sp|Q23TC8.3|RL21_TETTS (RecName: Full=60S ribosomal protein L21) HSP 1 Score: 127.487 bits (319), Expect = 1.330e-34 Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGA 336 MT+ GYRR TR F++AYKTKG +S YL YK G+ VDI +G+ KGMP+K YHG+TG+VFNV ++GVIV++ V GR + KR+ V+IEHV S +T R +AN+ K E KAG+ KR QP+ A Sbjct: 1 MTHSYGYRRQTRKKFAKAYKTKGHVRISRYLTTYKVGEYVDIMVDGSQHKGMPYKLYHGRTGKVFNVNPRSIGVIVHRIVNGRYIEKRLHVKIEHVRPSNVKTALSKRYQANDQAKAEGNKAGKRV-STKRNPGQPLEA 138
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|51701823|sp|Q8SRW8.1|RL21_ENCCU (RecName: Full=60S ribosomal protein L21) HSP 1 Score: 124.405 bits (311), Expect = 2.210e-33 Identity = 66/145 (45.52%), Postives = 91/145 (62.76%), Query Frame = 0 Query: 202 KGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQP 346 KGYRRGTR +FS+ ++ GV H+S YL+ Y+ GD+VDI N A KGMPHK YHG+TGRV++V ++ V + KRV+G+ + K+I VRIEHV S+C + R+ +A+ G KR+ E P A VS +NQP Sbjct: 4 KGYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPRKAVEVSLDNNQP 148
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|1350689|sp|P38653.2|RL21_ENTHI (RecName: Full=60S ribosomal protein L21) HSP 1 Score: 117.857 bits (294), Expect = 8.790e-31 Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 0 Query: 203 GYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKA-NEVKKEEAKKAGQSAP----DCKRRAEQPIGAHLVSAKDNQPQFLAPIPYE 355 G R TR +F R ++ G+ + ST L YK GD V I N + Q G+P+K++HGKTGRV+NV HA+GV+VNK+V RI+ KR+ + EH+ S C+ DFL R A ++K+ + + P KR +QP A L+ D + +AP+ +E Sbjct: 6 GRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPLLPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220819|sp|A3DML6.1|RL21_STAMF (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 60.4622 bits (145), Expect = 1.898e-10 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 201 PKGYRRGTRDMFSRAYKTKG-VQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297 P+GYR TR +FS+ + KG V LS + YK GD V I N A KGMPH+ YHGKTG + + K IV + + K + +R EH+ +K Sbjct: 5 PRGYRHRTRKVFSKHIREKGAVPPLSLLMIDYKPGDKVHIVVNPAIHKGMPHRRYHGKTGTI--IGKRGKAYIVKITLGDK--EKTLFIRPEHLRPAK 98
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|73914082|sp|Q6M125.1|RL21_METMP (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 58.151 bits (139), Expect = 1.109e-9 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297 M +G+R TR + + KG+ L+ LKCY GD+V + + + QKGMPH +HGKTG V VA+ +V + G+ K I R +H+ SK Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLRESK 96
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|54292803|gb|AAV32453.1| (ribosomal protein L21 [Helicoverpa zea]) HSP 1 Score: 226.098 bits (575), Expect = 2.852e-70 Identity = 110/161 (68.32%), Postives = 129/161 (80.12%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+F+R ++T G LSTY+K YK GDIVDI+GNGA QKGMPHK+YHGKTGRV+NV +HA+GVIVNKRV+GRILPKRI+VRIEH+ HSKCR DFL RVK NE EAK AG+ A + KR+ P AH+VS + +P LAPIPYEFVA Sbjct: 1 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKAYHGKTGRVYNVTQHALGVIVNKRVRGRILPKRINVRIEHIKHSKCRQDFLKRVKENERLLAEAKAAGKIA-NLKRQPAGPKPAHIVSGTE-KPVLLAPIPYEFVA 159
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|936683961|ref|XP_014239044.1| (60S ribosomal protein L21-like [Trichogramma pretiosum]) HSP 1 Score: 226.098 bits (575), Expect = 2.979e-70 Identity = 107/161 (66.46%), Postives = 130/161 (80.75%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+FSR ++ +G HLSTY++ YK GDIVDIKG+GA QKGMP+K YHGKTGRVFNV +HA+G+IVNKRV+G+ILPKRI+VRIEHV HSKCR DFL RVK NE + EAK+ ++ + KR+ QP AH+V K +PQ LAPIPYEF+A Sbjct: 1 MTNSKGYRRGTRDLFSRRFRKRGTLHLSTYMRVYKVGDIVDIKGDGAIQKGMPYKDYHGKTGRVFNVTQHALGIIVNKRVRGKILPKRINVRIEHVKHSKCRDDFLRRVKENEKLRLEAKQ-NKTKVNLKRQPAQPRPAHIVKGK-GEPQMLAPIPYEFIA 159
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1176098326|ref|XP_020619824.1| (60S ribosomal protein L21-like [Orbicella faveolata]) HSP 1 Score: 226.098 bits (575), Expect = 3.048e-70 Identity = 107/161 (66.46%), Postives = 123/161 (76.40%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 M N G RRGTR MFSR ++ +GV HLSTYLK YK GDIVDIK NGA KGMPHK YHGKTGR+FNV K AVGV+VNK+VKG+ILPKRI+VR+EH+ HSKCR DFL RVK NE+KK++AK+ G DCKR+ P AH V K N P+ L PIPYEFV Sbjct: 1 MVNTTGVRRGTRYMFSRDFRKRGVIHLSTYLKNYKVGDIVDIKVNGAIHKGMPHKVYHGKTGRIFNVTKRAVGVVVNKQVKGKILPKRINVRVEHIKHSKCRDDFLRRVKENELKKKDAKEKGLVKIDCKRKPTAPRLAHFVRTKRNTPETLEPIPYEFVV 161
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|56462242|gb|AAV91404.1| (ribosomal protein 6 [Lonomia obliqua]) HSP 1 Score: 226.098 bits (575), Expect = 3.077e-70 Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+F+R ++TKG LSTY+K YK GDIVDI+GNGA QKGMPHK YHGKTGRV+NV HA+GVIVNKRV+GRILPKRI++R+EHV HSKCR DFL RVK NE +EAK AG+ KR+ P AH+VS + +P LAPIPYEFVA Sbjct: 1 MTNSKGYRRGTRDLFARRFRTKGTISLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRILPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKVV-HLKRQPAPPKAAHIVSGAE-KPVLLAPIPYEFVA 159
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|914615143|ref|NP_001298764.1| (60S ribosomal protein L21 [Papilio xuthus] >gi|389608391|dbj|BAM17805.1| ribosomal protein L21 [Papilio xuthus] >gi|930658850|gb|KPJ01032.1| 60S ribosomal protein L21 [Papilio xuthus]) HSP 1 Score: 225.713 bits (574), Expect = 3.865e-70 Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+F+R ++T G LSTY+K YK GDIVDI+GNGA QKGMPHK YHGKTGRV+NV HA+GVIVNKRV+GRILPKRI++R+EHV HSKCR DFL RVK NE +EAK AG+ KR+ E P AH+VS + +P LAPIPYEFVA Sbjct: 1 MTNSKGYRRGTRDLFARKFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRILPKRINIRVEHVKHSKCREDFLKRVKENERLLKEAKSAGKIV-KLKRQPEPPKAAHIVSGAE-KPILLAPIPYEFVA 159 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 60s ribosomal protein l21 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l21 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1526_size37455:11277..15946- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1526_size37455-snap-gene-0.11 ID=maker-scaffold1526_size37455-snap-gene-0.11|Name=60s ribosomal protein l21|organism=Tigriopus kingsejongensis|type=gene|length=4670bp|location=Sequence derived from alignment at scaffold1526_size37455:11277..15946- (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l21' has the following synonyms
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