60s ribosomal protein l21, maker-scaffold1526_size37455-snap-gene-0.11 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l21
Unique Namemaker-scaffold1526_size37455-snap-gene-0.11
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Match: EMLSAG00000012017 (supercontig:LSalAtl2s:LSalAtl2s856:144245:145062:1 gene:EMLSAG00000012017 transcript:EMLSAT00000012017 description:"maker-LSalAtl2s856-augustus-gene-1.29")

HSP 1 Score: 283.878 bits (725), Expect = 5.821e-97
Identity = 131/161 (81.37%), Postives = 142/161 (88.20%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMF+R YK KGV+HLSTYL+CYK GDIVDIKGNGAFQKGMPHKSYHGKTGRVFNV+KHAVGV+VNKRVKGRIL KRISVRIEHV HSKCR DFL RVKANE  K  AK+ G+  P+ KR A+QPI  H VSA+DN+PQFLAPIPYEFVA
Sbjct:    1 MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSKCRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQFLAPIPYEFVA 161
[Close]
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220815|sp|A6UR83.1|RL21_METVS (RecName: Full=50S ribosomal protein L21e)

HSP 1 Score: 56.6102 bits (135), Expect = 3.701e-9
Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297
            M   +G+R  TR   S+  + KG+  L+  LKCY  GD V +  + + QKGMPH  +HGKTG V  V++     +V  +  G+   K I  R +H+  SK
Sbjct:    1 MQKSEGFRSKTRYKLSKHPRQKGLFPLTRALKCYTEGDTVHVVIDPSVQKGMPHPKFHGKTGTV--VSQRGRAFLVRVKDGGKY--KDIIARPQHLRESK 96
[Close]
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220812|sp|A6VI82.1|RL21_METM7 (RecName: Full=50S ribosomal protein L21e >gi|226733344|sp|A9A8J8.1|RL21_METM6 RecName: Full=50S ribosomal protein L21e)

HSP 1 Score: 55.0694 bits (131), Expect = 1.295e-8
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297
            M   +G+R  TR    +  + KG+  L+  LKCY  GD V +  + + QKGMPH  +HGKTG V  VA+     +V  +  G+   K I  R +H+  SK
Sbjct:    1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGRSFLVRVKDGGKY--KDIIARPQHLRESK 96
[Close]
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220811|sp|A4G096.1|RL21_METM5 (RecName: Full=50S ribosomal protein L21e)

HSP 1 Score: 54.6842 bits (130), Expect = 1.860e-8
Identity = 36/100 (36.00%), Postives = 53/100 (53.00%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297
            M   +G+R  TR    +  + KG+  L+  LKCY  GD V +  + + QKGMPH  +HGKTG +  VA+     +V  +  G+   K I  R +H+  SK
Sbjct:    1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGKTGVI--VAQRGRSFLVRVKDGGKY--KDIIARPQHLRESK 96
[Close]
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|20978625|sp|Q975F2.1|RL21_SULTO (RecName: Full=50S ribosomal protein L21e)

HSP 1 Score: 54.6842 bits (130), Expect = 2.006e-8
Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = 0 
Query:  197 IMTNPKGYRRGTRDMFSRAYKTKG-VQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRIL-------PKRISVRIEHV 293
            ++ + KGYR  TR + ++  + +G V  LS  ++ +K GD V IK N +  KGMPH+ YHGK           VGVI  KR K  I+        K I VR EH+
Sbjct:    1 MVKHSKGYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGK-----------VGVIQGKRGKAYIVRVTLGDKEKVIIVRPEHL 94
[Close]
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|76363358|sp|Q4JB11.1|RL21_SULAC (RecName: Full=50S ribosomal protein L21e)

HSP 1 Score: 54.6842 bits (130), Expect = 2.045e-8
Identity = 37/98 (37.76%), Postives = 50/98 (51.02%), Query Frame = 0 
Query:  197 IMTNPKGYRRGTRDMFSRAYKTKG-VQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHV 293
            ++   KGYR  TR +  +  + KG +  LS  +  Y  G+ V +K N +  KGMPH+ YHGK G V      A  V VN   K R+L     VR EH+
Sbjct:    1 MVARSKGYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLVVGKRGKAYEVKVNIGDKERVL----IVRPEHL 94
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|225713206|gb|ACO12449.1| (60S ribosomal protein L21 [Lepeophtheirus salmonis] >gi|290563133|gb|ADD38960.1| 60S ribosomal protein L21 [Lepeophtheirus salmonis])

HSP 1 Score: 283.878 bits (725), Expect = 5.452e-93
Identity = 131/161 (81.37%), Postives = 142/161 (88.20%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMF+R YK KGV+HLSTYL+CYK GDIVDIKGNGAFQKGMPHKSYHGKTGRVFNV+KHAVGV+VNKRVKGRIL KRISVRIEHV HSKCR DFL RVKANE  K  AK+ G+  P+ KR A+QPI  H VSA+DN+PQFLAPIPYEFVA
Sbjct:    1 MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSKCRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQFLAPIPYEFVA 161
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961375766|gb|ALS04627.1| (60S ribosomal protein L21 [Pseudodiaptomus poplesia])

HSP 1 Score: 259.61 bits (662), Expect = 1.798e-83
Identity = 123/161 (76.40%), Postives = 137/161 (85.09%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNP GYRRGTRDMFSRA+K +GV+HLSTYLK YK GDIVD+KG GAFQKGMPHK+YHGKTGRVFNV+KHAVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK  G S   CKR   QP  AH+VS KDN PQ L P+PYEF+A
Sbjct:    1 MTNPTGYRRGTRDMFSRAHKKRGVEHLSTYLKTYKIGDIVDVKGCGAFQKGMPHKAYHGKTGRVFNVSKHAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKATG-SGVICKRFPAQPREAHVVSTKDNVPQVLGPVPYEFIA 160
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961376280|gb|ALS04884.1| (60S ribosomal protein L21 [Pseudodiaptomus poplesia])

HSP 1 Score: 258.07 bits (658), Expect = 7.488e-83
Identity = 123/161 (76.40%), Postives = 136/161 (84.47%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNP GYRRGTRDMFSRA+K +GV+HLSTYLK YK GDIVD KG GAFQKGMPHK+YHGKTGRVFNV+KHAVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK  G S   CKR   QP  AH+VS KDN PQ L P+PYEF+A
Sbjct:    1 MTNPTGYRRGTRDMFSRAHKKRGVEHLSTYLKTYKIGDIVDAKGCGAFQKGMPHKAYHGKTGRVFNVSKHAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKATG-SGVICKRFPAQPREAHVVSTKDNVPQVLGPVPYEFIA 160
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961375184|gb|ALS04336.1| (60S ribosomal protein L21 [Acartia pacifica])

HSP 1 Score: 258.07 bits (658), Expect = 9.412e-83
Identity = 121/161 (75.16%), Postives = 135/161 (83.85%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMFSR YK  GVQHLSTYLK YK GDIVD+KG GAFQKGMPHKSYHGKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK +G++   CKR    P   H+VS KDN PQ + P+PYEF+A
Sbjct:    1 MTNPKGYRRGTRDMFSRGYKKNGVQHLSTYLKTYKMGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKRAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLGRVHSNEVKKKEAKASGETV-ICKRLPVGPRPGHVVSTKDNAPQIIGPVPYEFIA 160
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961375182|gb|ALS04335.1| (60S ribosomal protein L21 [Acartia pacifica] >gi|961375186|gb|ALS04337.1| 60S ribosomal protein L21 [Acartia pacifica])

HSP 1 Score: 257.684 bits (657), Expect = 1.158e-82
Identity = 121/161 (75.16%), Postives = 135/161 (83.85%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMFSR YK  GVQHLSTYLK YK GDIVD+KG GAFQKGMPHKSYHGKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK +G++   CKR    P   H+VS KDN PQ + P+PYEF+A
Sbjct:    1 MTNPKGYRRGTRDMFSRGYKKNGVQHLSTYLKTYKMGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKRAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKASGETV-ICKRLPVGPRPGHVVSTKDNAPQIIGPVPYEFIA 160
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961376098|gb|ALS04793.1| (60S ribosomal protein L21 [Pseudodiaptomus poplesia])

HSP 1 Score: 256.144 bits (653), Expect = 4.138e-82
Identity = 122/161 (75.78%), Postives = 135/161 (83.85%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNP GYRR TRDMFSRA+K  GV+HLSTYLK YK GDIVD+KG GAFQKGMPHK+YHGKTGRVFNV+KHAVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK  G S   CKR   QP  AH+VS KDN PQ L P+PYEF+A
Sbjct:    1 MTNPTGYRRSTRDMFSRAHKKWGVEHLSTYLKTYKIGDIVDVKGCGAFQKGMPHKAYHGKTGRVFNVSKHAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKATG-SGVICKRFPAQPREAHVVSTKDNVPQVLGPVPYEFIA 160
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961375188|gb|ALS04338.1| (60S ribosomal protein L21 [Acartia pacifica])

HSP 1 Score: 255.373 bits (651), Expect = 8.306e-82
Identity = 120/161 (74.53%), Postives = 135/161 (83.85%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTRDMFSR YK  GVQHLSTYLK YK GDIVD+KG GAFQKGMPHKSY+GKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV +NEVKK+EAK +G++   CKR    P   H+VS KDN PQ + P+PYEF+A
Sbjct:    1 MTNPKGYRRGTRDMFSRGYKKNGVQHLSTYLKTYKMGDIVDVKGCGAFQKGMPHKSYYGKTGRVFNVSKRAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHSNEVKKKEAKASGETV-ICKRLPVGPRPGHVVSTKDNAPQIIGPVPYEFIA 160
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|961376066|gb|ALS04777.1| (60S ribosomal protein L21 [Pseudodiaptomus poplesia])

HSP 1 Score: 251.906 bits (642), Expect = 1.889e-80
Identity = 120/161 (74.53%), Postives = 133/161 (82.61%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            M NP GYRRGTRDMFSRA+K KGV+HLSTYLK YK GDIVD+KG GAFQKGMPHKSYHGKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV ANEVKK E K  G +   CKR   +P   H+VS KDN+PQ + PIPYEF+A
Sbjct:    1 MVNPTGYRRGTRDMFSRAHKKKGVEHLSTYLKNYKIGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKQAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHANEVKKTEQKTTGATV-VCKRFPFEPRPGHVVSTKDNEPQVIGPIPYEFIA 160
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1325278896|ref|XP_023324089.1| (60S ribosomal protein L21-like [Eurytemora affinis])

HSP 1 Score: 248.44 bits (633), Expect = 5.633e-79
Identity = 120/161 (74.53%), Postives = 130/161 (80.75%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            M NP GYRRGTRDMFSR YK  GV+HLSTYLK YK GDIVD+KG GAFQKGMPHKSYHGKTGRVFNV+K AVGV+VNKRVKG+ILPKRISVRIEHV HS+CR DFL RV  NEVKK E K  G+   +CKR    P  AH VS KDNQPQ + PIPYEF+A
Sbjct:    1 MVNPTGYRRGTRDMFSRGYKKGGVEHLSTYLKNYKIGDIVDVKGCGAFQKGMPHKSYHGKTGRVFNVSKQAVGVVVNKRVKGKILPKRISVRIEHVKHSQCRKDFLDRVHTNEVKKREQKVTGKLV-ECKRFPLAPRPAHTVSTKDNQPQDIGPIPYEFMA 160
[Close]
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|166952301|gb|ABZ04233.1| (ribosomal protein rpl3 [Lineus viridis])

HSP 1 Score: 238.81 bits (608), Expect = 2.875e-75
Identity = 114/161 (70.81%), Postives = 128/161 (79.50%), Query Frame = 0 
Query:  198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358
            MTNPKGYRRGTR MFSR +K KGV HLS YLKCY+ GDIVDIKG+GA QKGMPHKSYHG+TGRV+NV +HAVGVIVNKRV+G+IL KRI++RIEHV HS CR DFL+RVK NEV K EA+  G   P+CKR  + P  AH V  K N PQ   PIPYEFVA
Sbjct:    1 MTNPKGYRRGTRYMFSRQFKKKGVTHLSKYLKCYRRGDIVDIKGDGAIQKGMPHKSYHGRTGRVYNVTQHAVGVIVNKRVRGKILAKRINLRIEHVKHSNCRLDFLNRVKRNEVIKREARVKG-VKPECKRLPQGPKKAHFVRTKGNLPQVFEPIPYEFVA 160
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000120175.821e-9781.37supercontig:LSalAtl2s:LSalAtl2s856:144245:145062:1... [more]
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BLAST of 60s ribosomal protein l21 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|166220815|sp|A6UR83.1|RL21_METVS3.701e-937.00RecName: Full=50S ribosomal protein L21e[more]
gi|166220812|sp|A6VI82.1|RL21_METM71.295e-837.00RecName: Full=50S ribosomal protein L21e >gi|22673... [more]
gi|166220811|sp|A4G096.1|RL21_METM51.860e-836.00RecName: Full=50S ribosomal protein L21e[more]
gi|20978625|sp|Q975F2.1|RL21_SULTO2.006e-838.10RecName: Full=50S ribosomal protein L21e[more]
gi|76363358|sp|Q4JB11.1|RL21_SULAC2.045e-837.76RecName: Full=50S ribosomal protein L21e[more]

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BLAST of 60s ribosomal protein l21 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225713206|gb|ACO12449.1|5.452e-9381.3760S ribosomal protein L21 [Lepeophtheirus salmonis... [more]
gi|961375766|gb|ALS04627.1|1.798e-8376.4060S ribosomal protein L21 [Pseudodiaptomus poplesi... [more]
gi|961376280|gb|ALS04884.1|7.488e-8376.4060S ribosomal protein L21 [Pseudodiaptomus poplesi... [more]
gi|961375184|gb|ALS04336.1|9.412e-8375.1660S ribosomal protein L21 [Acartia pacifica][more]
gi|961375182|gb|ALS04335.1|1.158e-8275.1660S ribosomal protein L21 [Acartia pacifica] >gi|9... [more]
gi|961376098|gb|ALS04793.1|4.138e-8275.7860S ribosomal protein L21 [Pseudodiaptomus poplesi... [more]
gi|961375188|gb|ALS04338.1|8.306e-8274.5360S ribosomal protein L21 [Acartia pacifica][more]
gi|961376066|gb|ALS04777.1|1.889e-8074.5360S ribosomal protein L21 [Pseudodiaptomus poplesi... [more]
gi|1325278896|ref|XP_023324089.1|5.633e-7974.5360S ribosomal protein L21-like [Eurytemora affinis... [more]
gi|166952301|gb|ABZ04233.1|2.875e-7570.81ribosomal protein rpl3 [Lineus viridis][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1526_size37455supercontigscaffold1526_size37455:11277..15946 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1526_size37455-snap-gene-0.11-mRNA-1maker-scaffold1526_size37455-snap-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1526_size37455:11277..15946-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1526_size37455-snap-gene-0.11 ID=maker-scaffold1526_size37455-snap-gene-0.11|Name=60s ribosomal protein l21|organism=Tigriopus kingsejongensis|type=gene|length=4670bp|location=Sequence derived from alignment at scaffold1526_size37455:11277..15946- (Tigriopus kingsejongensis)
ATGACTGCGGCCAGCACTTTGCATCAAACCCAACTCCAGGTTCGCCAGCA
GCTCGAGGCCAACTGCGCCCAACTGCGGCAATTGAAGGAGTTGAGCAATG
ACTTGGAAGCTCAATCTCGTGATGCCACTGGACGACGTCTCCACCGGGAA
TGGACGGAAAAGCTACGCACGTCCAAGTCGGTCCACGATATGCAGCAGAG
CAAGGAGGAGGAATACCGGGCTGCGGCAGTTCAAGACCAGGCGGTCTGTG
GGCGGCGCGACCATCTGCGGGCGGCGATCAAGACGGCTCAAGAGGCGCTG
AGCGGCCTCAGAAGTCTGGGTGGGATCGAATTGAATCGGGTTTTTGCCCA
GCGGGTACATTTAACTTACTTGGCCCTCTCGGATGCGGCTCTGGAAGACT
TGATAAATTCGGAAATGGGTCCTTCCCCCGAATTGGAGGCCCAACTGATC
GAATTTCAAAGGAAGAGGGACTGTGCAGTCCAAGAGCTGGATCAATTGGA
GTCTGGTGAGGAGTTGGATGCAATCATGGCCGAGATTGAGCGACTTCAGA
AGCTAAAGGTGGAGCAACAGGGCCAGTTAGATCAATTGTCGGCCGAAAAT
TGCCAGCTGCGAAGCGCTTTGGAACGACACTGAGATTAAATTTCGCCGTC
AAACGTAAGATCTCTGGAGTGAAGACTCGATACGTGCCAAATTTTGAGTG
TACGAATAAATTCACGTTGGTATTCAATAGCCTCTTCCCGTCATGAAATA
CTTGAGGTTGATCAAAAGATGATCACTGATCTGTACGCTGGAAAAAACTT
TTCGCCGCTTTTTTTCGCGGTGTGTGTTGGAAATAATGGGAAATGCTACT
AATAGTCTTAAATGCTGGAAATGGTCTGAAATGCTGGTAATAAGCTGATT
TCCTGAAGAAAGGACTGATTTCAGCCAGTGACTGATGGCACAAACTTCAA
AATGGTGAACATCTTAAAACTAGAGTCCAAACTACTTACAGAACACAATG
GGTTCAAGCCGGATTGAATTGAAATTCAGCCGAACTTTTTTGCTTCGTTT
TACCAAAGTCAAGGGGTGTCAACTTTTCTGCAATTAACCAAGGCAAGCAT
ATGCGCATTTGAAACGCACTTCCAATTGACACCATTGTTGAAATATTGGG
TGGTTTTCCCAGATCCATGAATGTTTTTCCTACAATTGTATGTTCCTCGT
CATTGGTAACTGCGTGCGTGTCGCATTATCGGCCAGTTGTGAAAATATCG
GTTGCCACTATTTTCTTTCCAGTTCTTTAACCTTCGATATATACAAACAT
AGCCTGTAAAAAGAAATAGGTCTTAAATTGAAGTCTACCAATGAATTTCC
TTTCATTTTGTGGTGCATCTAGTCAGTATTTTCGATTATTTTCATTTAGA
AAATTGCTTGGATTTCCTCAAATGCGAATTTATTTTAATTATATTTATCT
AAATATGCAAGTTGATATTTAGTCCCCCCCAAAAGCATATCGAATGTTTT
GTTTTTTGATATCGTTTCACGAGTTCCTTCGTTTCTTAAAAGGCGTTTTC
CTCCTATGATTAGCTATTTTTGGGGTTTCACTCTTTTCATTTGCTGGAAA
TCTGTTTTTTTGTTTAATTGCTGTTTTTTTGCTGGACACGTCATTTTTTC
GGCTGTTTCCACAGTTTTTGGGGGCAATTTTTATTGTTTTTTTTACAGCC
CTACTAATTAGGATAACCATGCATATTCTCAAACGACTTCTAGTCGCACT
CAATTGGGTGCCCTCCAATCCAGCGGGTTTGATACATTTATGACTACGAA
TCAATAATAAGCAGTTGAATATCCAAAAATAAACCAATTTTCGATCAGCG
TTGACTGATTGGTTCAAGTGGTTGTGAAGCAGGTGGCAAATTCCAAACAT
ATGTAGTTATTGAACCACCTGGTTCACCAACTTCTTATGTATGTACATAG
TAGAGGCAAGGCTCGAAGCCTGTCACTCGACTCTGTTCATCGACAAGTGG
CGAACCCAAACAATATATCACTCTATAAAGGACTCTGAATCGCCCTGTGG
GTGATCAATCGAACGAATCAAGCGTGTGTGCACTCGGCCCGCAGGATAAA
TTATTACATAGCATTCTGTAGCTATACATGACCTAACTGGTGAATATTCT
AGGTTGGTACTATGGCCATTTGCGAGACGGTTATTCCAGTCAATTGACTG
AAAACTGACCCCAGTTGACCAGAAAAAGCACTGCCACGTTTCTAGTCACG
CATAGGTTTTTTTTAGAGGATTAGGGGTCTTTTTAACTCCATGCCCAGAT
TGACCAAACCTATGGAAATATATGGAATGCTCCGAAGTTGTTAACGATTG
AATGATTGGTGTGTTATCAGCTATATATTTGCAAGAAGTCATGTTGGTGA
AATGTCGAGTACAAAAATTAGCCAATTTGGCTAGTCACGAAGCACAGACG
ACTTTCATTTGGCTTCTCATCTTTTATCACATTTGAGTTTCAGATTGTTA
GCAATTGCTGCTGACTTGTTTTGGGTTTGCTTCCTCACAATTTGGGGCCG
GATTTCGGCTTCCAAAGGCCTGAACCTTAGATTGATGCCAATGCCGCGAT
TCCACGAGCCACGGATTTGGCCTCGTTCTTCGTGGTGGCTGCCCCCCTCA
GGGCTGGAAAGAGGTTCCACAACTTGATGCCATAGTCTGCTAGTGTGTTG
GCGGTTTTGAGCGGGTTTGGTGGCCCATAGCACCCAGCCGCTCATAGCAA
TACAGTATATTGTTGTCACGTAAGAATGACTCGTTTCAGTATAAGCCAAT
GTTAACACTTATGGCCGCCCTTGAATCAATAACTTTGATACAATAACTTT
GATACAATAACTTTGATACAATAACTTTGATACAATAATTATGATACAAT
AATTATGATACAATAACTTTGTTACAATAATTTTGATACAATAACTTTGA
TACAATAACTTTGATACAATCTCTTTGATGCAATCCCTCTGATACAATCC
CTTTGATACAATCCCTTTGATACAATCCCTGTGATACAATCCCTGTTATA
CACTCCCTTTGATACAATAACTTTGATACAATCTCTTTGATGCAATCCCT
CTGATACAATCCCTGTGATACACTCCCTTTGATACAATCACTTTGATACA
ATCTCTTTGAATTAGTATCTTGAATCAACAATGATTGGCGAGCAAGCAGA
GGGAAGCCCATCTGAAGTGCTGCAACCCCACTTTAATCCCAGACACTCCT
GGGTGGATGTGTGTGTAATCCTGTATTCCTACATAATTGAAATCGGTTTA
TACCCGGGAGTCAACACTTAGCCAACGAATGCTAATCAATCGTGTTAGGG
CCATTTATAAGAATATATGTACACATATGAAGAGGTAACGCAAAATAAAC
ATAACTGCAGAAACATAACAACATTACAGCAAACTATGCAAAACAAGACA
ACATAATAGTGGAAAAGCACAATAAATGTTTACGAGCCAATACAGATCAA
TAAATGCATTCAGAATAAAACCATACACAATAAATAATAGCGAAACTTGA
CCAAACAATCGATGTTGACAAAACTATACCAAACAGAGAAGAACACATTA
TCGCCCGATGTATAAGTATAAATGCGTAGCATTAGGTCAATGGAAATCGG
ACCCCGATTCCCATAAGAGCTCAATGTTGAATGGCCCGAGGGGTGTAATG
TACACACGCTCAGAGAAGAGCCCAGAATCGGAACTTTTTCAGGACTTTTT
CCACTCAAAAGGAGAGGCCATTAGTCCCGAGCTTGCGTGAGTCCAAAGAC
CTCCGTTTCCGTCCACGGCGATTTTCTCATGACTTTGTGTGTCTTTCCCT
CAGCTCAACTTCTTCCTTTTCCGCTTGGAGCGCCGTTCAGGTAAGACCGA
ATTCAATATTTCCTAGCCCGATTTGCGTTCAGCCCGCCGAGGTGAGTGCC
CCTCGGATTGAATTGAGAGGCTCAGCGGTGAGCTGAGCCACTTCCGGAGC
CGAGTGGAACCATCCGGGGCGTGTAGGGAGGCGTTTTGACCCGGGTCTAT
TCTTTGCAGTCCAGAGCCGATCGCCCCACTCCACCTTTCATCATGACTAA
TCCCAAGGGTTATCGTCGCGGTACCCGCGACATGTTCTCCCGGGCCTACA
AGACCAAGGGCGTGCAGCACTTGTCCACTTACCTCAAGTGCTACAAGACC
GGCGACATTGTGGACATCAAGGGCAACGGCGCCTTCCAGAAGGGCATGCC
CCACAAGTCCTACCACGGCAAGACTGGACGCGTGTTCAACGTGGCCAAGC
ACGCAGTCGGTGTGATCGTCAACAAGCGTGTCAAGGGACGCATCTTGCCC
AAGAGGATCTCCGTCAGGATCGAGCACGTGACCCACTCCAAGTGCCGTAC
CGACTTCTTGTCGCGCGTCAAGGCCAATGAGGTCAAGAAAGAGGAAGCCA
AGAAAGCCGGCCAGTCCGCTCCCGACTGCAAGCGACGGGTAAGAAGATTG
GGTCAGCGGGTCCAGGGACATGTCCATGACCTCGTCCGGTTTCTATTTCA
GGCTGAACAACCCATTGGTGCCCACTTGGTCAGCGCCAAGGACAACCAGC
CTCAGTTCCTGGCTCCCATTCCTTATGAATTCGTCGCCTAAGTTGGAAAT
AAAGATGGATGTGTACCTCA
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Synonyms
The feature '60s ribosomal protein l21' has the following synonyms
Synonym
Tk00731
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