60s ribosomal protein l21, maker-scaffold1526_size37455-snap-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Match: EMLSAG00000012017 (supercontig:LSalAtl2s:LSalAtl2s856:144245:145062:1 gene:EMLSAG00000012017 transcript:EMLSAT00000012017 description:"maker-LSalAtl2s856-augustus-gene-1.29") HSP 1 Score: 283.878 bits (725), Expect = 5.821e-97 Identity = 131/161 (81.37%), Postives = 142/161 (88.20%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTNPKGYRRGTRDMF+R YK KGV+HLSTYL+CYK GDIVDIKGNGAFQKGMPHKSYHGKTGRVFNV+KHAVGV+VNKRVKGRIL KRISVRIEHV HSKCR DFL RVKANE K AK+ G+ P+ KR A+QPI H VSA+DN+PQFLAPIPYEFVA Sbjct: 1 MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSKCRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQFLAPIPYEFVA 161
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220815|sp|A6UR83.1|RL21_METVS (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 56.6102 bits (135), Expect = 3.701e-9 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297 M +G+R TR S+ + KG+ L+ LKCY GD V + + + QKGMPH +HGKTG V V++ +V + G+ K I R +H+ SK Sbjct: 1 MQKSEGFRSKTRYKLSKHPRQKGLFPLTRALKCYTEGDTVHVVIDPSVQKGMPHPKFHGKTGTV--VSQRGRAFLVRVKDGGKY--KDIIARPQHLRESK 96
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220812|sp|A6VI82.1|RL21_METM7 (RecName: Full=50S ribosomal protein L21e >gi|226733344|sp|A9A8J8.1|RL21_METM6 RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 55.0694 bits (131), Expect = 1.295e-8 Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297 M +G+R TR + + KG+ L+ LKCY GD V + + + QKGMPH +HGKTG V VA+ +V + G+ K I R +H+ SK Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGRSFLVRVKDGGKY--KDIIARPQHLRESK 96
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220811|sp|A4G096.1|RL21_METM5 (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 54.6842 bits (130), Expect = 1.860e-8 Identity = 36/100 (36.00%), Postives = 53/100 (53.00%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297 M +G+R TR + + KG+ L+ LKCY GD V + + + QKGMPH +HGKTG + VA+ +V + G+ K I R +H+ SK Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGKTGVI--VAQRGRSFLVRVKDGGKY--KDIIARPQHLRESK 96
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|20978625|sp|Q975F2.1|RL21_SULTO (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 54.6842 bits (130), Expect = 2.006e-8 Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = 0 Query: 197 IMTNPKGYRRGTRDMFSRAYKTKG-VQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRIL-------PKRISVRIEHV 293 ++ + KGYR TR + ++ + +G V LS ++ +K GD V IK N + KGMPH+ YHGK VGVI KR K I+ K I VR EH+ Sbjct: 1 MVKHSKGYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGK-----------VGVIQGKRGKAYIVRVTLGDKEKVIIVRPEHL 94
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|76363358|sp|Q4JB11.1|RL21_SULAC (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 54.6842 bits (130), Expect = 2.045e-8 Identity = 37/98 (37.76%), Postives = 50/98 (51.02%), Query Frame = 0 Query: 197 IMTNPKGYRRGTRDMFSRAYKTKG-VQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHV 293 ++ KGYR TR + + + KG + LS + Y G+ V +K N + KGMPH+ YHGK G V A V VN K R+L VR EH+ Sbjct: 1 MVARSKGYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLVVGKRGKAYEVKVNIGDKERVL----IVRPEHL 94
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1022765780|gb|KZS10913.1| (60S ribosomal protein L21 [Daphnia magna]) HSP 1 Score: 237.654 bits (605), Expect = 6.935e-75 Identity = 111/161 (68.94%), Postives = 131/161 (81.37%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 M N KGYRRGTR +FS+ +K GV+ LST+LK YK GDIVDIKGNGAFQKGMP K YHGKTGRVFNV +HAVG+IVNK+V+G+ILPKRI+VR+EH+ HSKCR DFL+RVK NE K+EAK+ G CKR+ +QP AH VS K N+P FLAPIPYEF+A Sbjct: 1 MVNSKGYRRGTRHLFSKKFKEHGVEPLSTFLKVYKKGDIVDIKGNGAFQKGMPFKYYHGKTGRVFNVTQHAVGIIVNKQVRGKILPKRINVRVEHINHSKCRQDFLTRVKTNERLKKEAKEKGIKV-SCKRQPQQPRPAHFVSTKKNEPIFLAPIPYEFIA 160
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1316154988|ref|XP_023222546.1| (60S ribosomal protein L21-like [Centruroides sculpturatus]) HSP 1 Score: 233.417 bits (594), Expect = 3.623e-73 Identity = 110/161 (68.32%), Postives = 128/161 (79.50%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 M N KGYRRGTR +FSR ++ GV+ LST+LK YK GDIVDIKGNGAFQKGMPHK YHGKTGRVFNV HAVGVIVNKRV+ RI+PKRI+VR+EH+ HSKCR DF+ R+K NE +K+EAK+ KR+ QP GAH VS KDN+PQ L PIPYEF+A Sbjct: 1 MVNTKGYRRGTRYLFSRKFRKHGVEPLSTFLKVYKRGDIVDIKGNGAFQKGMPHKFYHGKTGRVFNVTPHAVGVIVNKRVRNRIIPKRINVRVEHIQHSKCRQDFIQRMKDNEQRKKEAKEKKIRV-SLKRQPAQPRGAHFVSTKDNKPQLLEPIPYEFIA 160
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|926619300|ref|XP_013774893.1| (60S ribosomal protein L21-like [Limulus polyphemus] >gi|926619302|ref|XP_013774894.1| 60S ribosomal protein L21-like [Limulus polyphemus]) HSP 1 Score: 233.032 bits (593), Expect = 5.908e-73 Identity = 110/161 (68.32%), Postives = 130/161 (80.75%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTNPKGYRRGTR +FSR +K KG++ LST+LK YK GDIVDIKGNGAFQKGMPHK YHGKTGRVFNV HAVGVIVNKRV+ RI+ KRI+VR+EHV HS+CR +FL+RVK N KK EAK+ G KR+A QP AH+V K+N+P+ L P+PYEF+A Sbjct: 1 MTNPKGYRRGTRYLFSRGFKKKGLEPLSTFLKVYKRGDIVDIKGNGAFQKGMPHKFYHGKTGRVFNVTPHAVGVIVNKRVRNRIIQKRINVRVEHVKHSRCRQEFLNRVKENNQKKMEAKEKGIKI-SLKRQAAQPREAHVVYTKNNEPELLEPVPYEFIA 160
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1061479836|gb|ODM97318.1| (60S ribosomal protein L21 [Orchesella cincta]) HSP 1 Score: 232.261 bits (591), Expect = 9.427e-73 Identity = 110/161 (68.32%), Postives = 128/161 (79.50%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTNPKGYRRGTRD+FSR +K G L TY+K YK GDIVDIKG+GA Q GMP++ YHGKTGRV+NV K A+GVIVNKR++G+ILPKRI+VRIEHVTHSKCRTDFL RV+ NE K EAK+ G CKR+ QP AH VSAK+N+P L P+PYEFVA Sbjct: 1 MTNPKGYRRGTRDLFSRPFKKHGTIPLGTYMKVYKVGDIVDIKGHGAVQVGMPYRYYHGKTGRVYNVTKRALGVIVNKRIRGKILPKRINVRIEHVTHSKCRTDFLERVQQNETLKREAKQQGLRV-HCKRQPLQPRPAHFVSAKNNEPVLLQPVPYEFVA 160
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|822092697|ref|NP_001295985.1| (60S ribosomal protein L21 [Plutella xylostella] >gi|49532866|dbj|BAD26668.1| Ribosomal protein L21 [Plutella xylostella]) HSP 1 Score: 230.335 bits (586), Expect = 6.103e-72 Identity = 112/161 (69.57%), Postives = 129/161 (80.12%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+F+R ++T G LSTY+K YK GDIVDI+GNGA QKGMPHK YHGKTGRV+NV HA+GVIVNKRV+GRILPKRI++RIEHV HSKCR DFL+RVK NE +EAK AG+ A KR+ QP AH+VS D +P LAPIPYEFVA Sbjct: 1 MTNSKGYRRGTRDLFARRFRTHGTISLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRILPKRINIRIEHVKHSKCRQDFLTRVKENERLLKEAKAAGKVA-KLKRQPAQPKPAHIVSG-DEKPVLLAPIPYEFVA 159
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1067073283|ref|XP_018020120.1| (PREDICTED: 60S ribosomal protein L21-like [Hyalella azteca]) HSP 1 Score: 229.565 bits (584), Expect = 1.186e-71 Identity = 105/161 (65.22%), Postives = 124/161 (77.02%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTNPKG RRGTRDMFSR +K GV+HL+TYL+CYK G +VDIKGNGAFQKGMPHKSYHGKTGR+FNV HA+GV+VNKRV+GRI KRI+VRIEHV+ SKCR D ++RVK N+ + +KAG+ P KRR P AH V+ P FL PIPY+FV Sbjct: 1 MTNPKGTRRGTRDMFSRGFKKNGVEHLTTYLRCYKMGQLVDIKGNGAFQKGMPHKSYHGKTGRIFNVTPHALGVVVNKRVRGRIFAKRINVRIEHVSPSKCRDDHIARVKYNDATRRACQKAGKPVPCLKRRPAGPKPAHYVNITRKPPTFLTPIPYQFVV 161
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|156378227|ref|XP_001631045.1| (predicted protein [Nematostella vectensis] >gi|156218078|gb|EDO38982.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 228.409 bits (581), Expect = 3.706e-71 Identity = 110/160 (68.75%), Postives = 125/160 (78.12%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFV 357 MTN KGYRRGTR MFS+ ++ +GV+HLSTYLKCYK GDIVD+K NGA QKGMPHK YHGKTGRV+NV K A+GV+VNK+VKG+IL KRI+VR+EHV HS CR DFL RVK NE KK EAK G A CKR+ QP AH V K N+P L PIPYEFV Sbjct: 1 MTNTKGYRRGTRYMFSKKFRHRGVEHLSTYLKCYKVGDIVDVKANGAVQKGMPHKVYHGKTGRVYNVTKRALGVVVNKQVKGKILAKRINVRVEHVKHSTCRDDFLRRVKENERKKHEAKAKGLIA-HCKRQPAQPKTAHFVRTKRNKPVTLQPIPYEFV 159
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1228380227|ref|XP_021951564.1| (60S ribosomal protein L21-like [Folsomia candida] >gi|1215270276|gb|OXA56588.1| hypothetical protein Fcan01_09464 [Folsomia candida]) HSP 1 Score: 227.639 bits (579), Expect = 6.241e-71 Identity = 108/161 (67.08%), Postives = 125/161 (77.64%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTNPKGYRRGTRD+FSR + KG L TY+K YK GDIVDIKGNGA Q GMP++ YHGKTGRV+NV K A+GVIVNK+++G+IL KRI+VR+EHVTHSKCRTDFL RV+ NE K EAK G CKR+ +QP AH VS K N PQ L PIPYEF+A Sbjct: 1 MTNPKGYRRGTRDLFSRRFGKKGTIPLGTYMKVYKVGDIVDIKGNGAVQSGMPYRYYHGKTGRVYNVTKRALGVIVNKKIRGKILAKRINVRVEHVTHSKCRTDFLDRVQENEKLKREAKTKGIRV-VCKRQPKQPRTAHFVSTKGNAPQLLQPIPYEFIA 160
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|919021171|ref|XP_013394467.1| (60S ribosomal protein L21-like [Lingula anatina] >gi|919042207|ref|XP_013404344.1| 60S ribosomal protein L21 [Lingula anatina]) HSP 1 Score: 227.254 bits (578), Expect = 1.172e-70 Identity = 106/161 (65.84%), Postives = 126/161 (78.26%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KG RRGTR MFSR ++TKG LSTY K Y+ GDIVDIKGNGA QKGMPHK YHGKTGRV+NV HAVG+IVNKRV+GRI+ KRI+VRIEH+ HS CR DFL+RV NE K EAK+ G++ P CKR+ ++P AH V + N+PQ + PIPYEF+A Sbjct: 1 MTNTKGIRRGTRYMFSRKFRTKGAIPLSTYFKTYRRGDIVDIKGNGAIQKGMPHKIYHGKTGRVYNVTPHAVGIIVNKRVRGRIIAKRINVRIEHIRHSACRVDFLNRVHENEKIKNEAKEKGEAPPHCKRQPKKPREAHTVRTRYNKPQTIQPIPYEFIA 161
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1191068411|ref|XP_020912772.1| (60S ribosomal protein L21-like [Exaiptasia pallida] >gi|1191070749|ref|XP_020914042.1| 60S ribosomal protein L21-like [Exaiptasia pallida] >gi|999968306|gb|KXJ07480.1| 60S ribosomal protein L21 [Exaiptasia pallida] >gi|999983704|gb|KXJ22845.1| 60S ribosomal protein L21 [Exaiptasia pallida]) HSP 1 Score: 226.098 bits (575), Expect = 2.674e-70 Identity = 108/160 (67.50%), Postives = 124/160 (77.50%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFV 357 M N GYRRGTR MFSR ++ +GV HLSTY+K YK DIVD+K NGA QKGMPHK YHGKTGRV+NV K A+GV+VNKRVKGRIL K+I+VRIEHV HSKCR DFL RVK NE+KK+EAK AG + CKR+ QP AH V K N+P L P+PYEFV Sbjct: 1 MVNTTGYRRGTRYMFSRDFRRRGVIHLSTYMKTYKVADIVDVKANGAIQKGMPHKIYHGKTGRVYNVTKRALGVVVNKRVKGRILAKKINVRIEHVKHSKCRDDFLRRVKENELKKKEAKAAGTTV-KCKRQPAQPRPAHFVKTKRNKPTTLQPLPYEFV 159 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 60s ribosomal protein l21 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l21 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1526_size37455:11277..15946- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1526_size37455-snap-gene-0.11 ID=maker-scaffold1526_size37455-snap-gene-0.11|Name=60s ribosomal protein l21|organism=Tigriopus kingsejongensis|type=gene|length=4670bp|location=Sequence derived from alignment at scaffold1526_size37455:11277..15946- (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l21' has the following synonyms
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