60s ribosomal protein l21, maker-scaffold1526_size37455-snap-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Match: EMLSAG00000012017 (supercontig:LSalAtl2s:LSalAtl2s856:144245:145062:1 gene:EMLSAG00000012017 transcript:EMLSAT00000012017 description:"maker-LSalAtl2s856-augustus-gene-1.29") HSP 1 Score: 283.878 bits (725), Expect = 5.821e-97 Identity = 131/161 (81.37%), Postives = 142/161 (88.20%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTNPKGYRRGTRDMF+R YK KGV+HLSTYL+CYK GDIVDIKGNGAFQKGMPHKSYHGKTGRVFNV+KHAVGV+VNKRVKGRIL KRISVRIEHV HSKCR DFL RVKANE K AK+ G+ P+ KR A+QPI H VSA+DN+PQFLAPIPYEFVA Sbjct: 1 MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSKCRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQFLAPIPYEFVA 161
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220815|sp|A6UR83.1|RL21_METVS (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 56.6102 bits (135), Expect = 3.701e-9 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297 M +G+R TR S+ + KG+ L+ LKCY GD V + + + QKGMPH +HGKTG V V++ +V + G+ K I R +H+ SK Sbjct: 1 MQKSEGFRSKTRYKLSKHPRQKGLFPLTRALKCYTEGDTVHVVIDPSVQKGMPHPKFHGKTGTV--VSQRGRAFLVRVKDGGKY--KDIIARPQHLRESK 96
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220812|sp|A6VI82.1|RL21_METM7 (RecName: Full=50S ribosomal protein L21e >gi|226733344|sp|A9A8J8.1|RL21_METM6 RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 55.0694 bits (131), Expect = 1.295e-8 Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297 M +G+R TR + + KG+ L+ LKCY GD V + + + QKGMPH +HGKTG V VA+ +V + G+ K I R +H+ SK Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGRSFLVRVKDGGKY--KDIIARPQHLRESK 96
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|166220811|sp|A4G096.1|RL21_METM5 (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 54.6842 bits (130), Expect = 1.860e-8 Identity = 36/100 (36.00%), Postives = 53/100 (53.00%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSK 297 M +G+R TR + + KG+ L+ LKCY GD V + + + QKGMPH +HGKTG + VA+ +V + G+ K I R +H+ SK Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDRVHVVLDPSVQKGMPHPKFHGKTGVI--VAQRGRSFLVRVKDGGKY--KDIIARPQHLRESK 96
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|20978625|sp|Q975F2.1|RL21_SULTO (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 54.6842 bits (130), Expect = 2.006e-8 Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = 0 Query: 197 IMTNPKGYRRGTRDMFSRAYKTKG-VQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRIL-------PKRISVRIEHV 293 ++ + KGYR TR + ++ + +G V LS ++ +K GD V IK N + KGMPH+ YHGK VGVI KR K I+ K I VR EH+ Sbjct: 1 MVKHSKGYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGK-----------VGVIQGKRGKAYIVRVTLGDKEKVIIVRPEHL 94
BLAST of 60s ribosomal protein l21 vs. SwissProt
Match: gi|76363358|sp|Q4JB11.1|RL21_SULAC (RecName: Full=50S ribosomal protein L21e) HSP 1 Score: 54.6842 bits (130), Expect = 2.045e-8 Identity = 37/98 (37.76%), Postives = 50/98 (51.02%), Query Frame = 0 Query: 197 IMTNPKGYRRGTRDMFSRAYKTKG-VQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHV 293 ++ KGYR TR + + + KG + LS + Y G+ V +K N + KGMPH+ YHGK G V A V VN K R+L VR EH+ Sbjct: 1 MVARSKGYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLVVGKRGKAYEVKVNIGDKERVL----IVRPEHL 94
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|54292803|gb|AAV32453.1| (ribosomal protein L21 [Helicoverpa zea]) HSP 1 Score: 226.098 bits (575), Expect = 2.852e-70 Identity = 110/161 (68.32%), Postives = 129/161 (80.12%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+F+R ++T G LSTY+K YK GDIVDI+GNGA QKGMPHK+YHGKTGRV+NV +HA+GVIVNKRV+GRILPKRI+VRIEH+ HSKCR DFL RVK NE EAK AG+ A + KR+ P AH+VS + +P LAPIPYEFVA Sbjct: 1 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKAYHGKTGRVYNVTQHALGVIVNKRVRGRILPKRINVRIEHIKHSKCRQDFLKRVKENERLLAEAKAAGKIA-NLKRQPAGPKPAHIVSGTE-KPVLLAPIPYEFVA 159
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|936683961|ref|XP_014239044.1| (60S ribosomal protein L21-like [Trichogramma pretiosum]) HSP 1 Score: 226.098 bits (575), Expect = 2.979e-70 Identity = 107/161 (66.46%), Postives = 130/161 (80.75%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+FSR ++ +G HLSTY++ YK GDIVDIKG+GA QKGMP+K YHGKTGRVFNV +HA+G+IVNKRV+G+ILPKRI+VRIEHV HSKCR DFL RVK NE + EAK+ ++ + KR+ QP AH+V K +PQ LAPIPYEF+A Sbjct: 1 MTNSKGYRRGTRDLFSRRFRKRGTLHLSTYMRVYKVGDIVDIKGDGAIQKGMPYKDYHGKTGRVFNVTQHALGIIVNKRVRGKILPKRINVRIEHVKHSKCRDDFLRRVKENEKLRLEAKQ-NKTKVNLKRQPAQPRPAHIVKGK-GEPQMLAPIPYEFIA 159
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|1176098326|ref|XP_020619824.1| (60S ribosomal protein L21-like [Orbicella faveolata]) HSP 1 Score: 226.098 bits (575), Expect = 3.048e-70 Identity = 107/161 (66.46%), Postives = 123/161 (76.40%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 M N G RRGTR MFSR ++ +GV HLSTYLK YK GDIVDIK NGA KGMPHK YHGKTGR+FNV K AVGV+VNK+VKG+ILPKRI+VR+EH+ HSKCR DFL RVK NE+KK++AK+ G DCKR+ P AH V K N P+ L PIPYEFV Sbjct: 1 MVNTTGVRRGTRYMFSRDFRKRGVIHLSTYLKNYKVGDIVDIKVNGAIHKGMPHKVYHGKTGRIFNVTKRAVGVVVNKQVKGKILPKRINVRVEHIKHSKCRDDFLRRVKENELKKKDAKEKGLVKIDCKRKPTAPRLAHFVRTKRNTPETLEPIPYEFVV 161
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|56462242|gb|AAV91404.1| (ribosomal protein 6 [Lonomia obliqua]) HSP 1 Score: 226.098 bits (575), Expect = 3.077e-70 Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+F+R ++TKG LSTY+K YK GDIVDI+GNGA QKGMPHK YHGKTGRV+NV HA+GVIVNKRV+GRILPKRI++R+EHV HSKCR DFL RVK NE +EAK AG+ KR+ P AH+VS + +P LAPIPYEFVA Sbjct: 1 MTNSKGYRRGTRDLFARRFRTKGTISLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRILPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKVV-HLKRQPAPPKAAHIVSGAE-KPVLLAPIPYEFVA 159
BLAST of 60s ribosomal protein l21 vs. nr
Match: gi|914615143|ref|NP_001298764.1| (60S ribosomal protein L21 [Papilio xuthus] >gi|389608391|dbj|BAM17805.1| ribosomal protein L21 [Papilio xuthus] >gi|930658850|gb|KPJ01032.1| 60S ribosomal protein L21 [Papilio xuthus]) HSP 1 Score: 225.713 bits (574), Expect = 3.865e-70 Identity = 109/161 (67.70%), Postives = 127/161 (78.88%), Query Frame = 0 Query: 198 MTNPKGYRRGTRDMFSRAYKTKGVQHLSTYLKCYKTGDIVDIKGNGAFQKGMPHKSYHGKTGRVFNVAKHAVGVIVNKRVKGRILPKRISVRIEHVTHSKCRTDFLSRVKANEVKKEEAKKAGQSAPDCKRRAEQPIGAHLVSAKDNQPQFLAPIPYEFVA 358 MTN KGYRRGTRD+F+R ++T G LSTY+K YK GDIVDI+GNGA QKGMPHK YHGKTGRV+NV HA+GVIVNKRV+GRILPKRI++R+EHV HSKCR DFL RVK NE +EAK AG+ KR+ E P AH+VS + +P LAPIPYEFVA Sbjct: 1 MTNSKGYRRGTRDLFARKFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRILPKRINIRVEHVKHSKCREDFLKRVKENERLLKEAKSAGKIV-KLKRQPEPPKAAHIVSGAE-KPILLAPIPYEFVA 159 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l21 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 60s ribosomal protein l21 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l21 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1526_size37455:11277..15946- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1526_size37455-snap-gene-0.11 ID=maker-scaffold1526_size37455-snap-gene-0.11|Name=60s ribosomal protein l21|organism=Tigriopus kingsejongensis|type=gene|length=4670bp|location=Sequence derived from alignment at scaffold1526_size37455:11277..15946- (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l21' has the following synonyms
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