xylosyltransferase 1-like, maker-scaffold155_size301336-snap-gene-2.9 (gene) Tigriopus kingsejongensis

Overview
Namexylosyltransferase 1-like
Unique Namemaker-scaffold155_size301336-snap-gene-2.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of xylosyltransferase 1-like vs. nr
Match: gi|1325280533|ref|XP_023324934.1| (uncharacterized protein LOC111698750 [Eurytemora affinis])

HSP 1 Score: 62.003 bits (149), Expect = 5.027e-9
Identity = 42/152 (27.63%), Postives = 69/152 (45.39%), Query Frame = 0 
Query:    9 LSFMLYCLIVVNASNADV----ITKDVAAKSIQVEDTSEDRLYFQGPDYTINLIPLAIIVKIIFVIG--YVIKYITDDSSQEITGYAPADSGYSSSFHGSGSSYSPPAVSYQQPSSSYASPSNSYSAPTTNHGSPNPSFVSSQSSYSSPTSN 154
            L  +LYC   + A         +  D+    +  ++    +LYF GP YTINLIP AI++ I+  I   ++   +   +S   +GY     GY +           P  SY  P +SY +P+ SY AP+  + +P+  + +S   +    SN
Sbjct:    9 LVLVLYCGQSIAALEVAAGPPGLRNDIQNTEVLSDEQGTGKLYFTGPGYTINLIPQAILLGILAAIAAFFLGLDLFGSNSASTSGYGAPSVGYGA-----------PEPSYGAPVASYGAPAASYGAPSAGYDAPSSGYTASARQFDYAKSN 149
The following BLAST results are available for this feature:
BLAST of xylosyltransferase 1-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of xylosyltransferase 1-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of xylosyltransferase 1-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 1
Match NameE-valueIdentityDescription
gi|1325280533|ref|XP_023324934.1|5.027e-927.63uncharacterized protein LOC111698750 [Eurytemora a... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold155_size301336supercontigscaffold155_size301336:281057..286382 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold155_size301336-snap-gene-2.9-mRNA-1maker-scaffold155_size301336-snap-gene-2.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold155_size301336:281057..286382+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold155_size301336-snap-gene-2.9 ID=maker-scaffold155_size301336-snap-gene-2.9|Name=xylosyltransferase 1-like|organism=Tigriopus kingsejongensis|type=gene|length=5326bp|location=Sequence derived from alignment at scaffold155_size301336:281057..286382+ (Tigriopus kingsejongensis)
AAGTCTCGCCATCTCAAAAAGATTCCATCCCAAAAGGATAGAATTGGTTG
GATCGAAATGACGTGAAATTTCAGCACAATTTGTTTTGAATTCGATTTCG
AGAGTGACAGACGTGCAAGCAAATGAAATTGCCAGGGCGCCTTACCGGCC
AAACTGACTAATTATTGCTCCTCTACCGTGAAAAAGTTGACGATCAGGTC
AATGTCACTCACCTGATAATACGAACAGTCTCAACACAAGTTCAATAGTC
CATATTCAAAATGAGACGCACAAGTGCTCCCGCATTATCATTCATGGTAA
GGCAATTGCTAATCTAAAAACCATGAAAAACATCTTCTGTTGTACAGCTT
TTCAAAATTCTTTTAACAAGTAGTGCAATTGAATATCCAATAATCGATCG
AAATGGAATTCCAAATTTGAATTGGATAATGGATAGTTCAGGAGAACAAA
TATAAACAGAGAAAAGGCAGAAAAATAAAATTATCCTAACACAAATTTCC
TTGACAATTTCAAAAACACACTTGCTGACCCAATACGCAAACAAAATAGT
TAAGACTCTAAATTACTAAAATATATGATTTATAATACAAACTCTGCAAA
CATATCATAAACAAAAGATTGCTTAATATTTTCTGGCAAAACACACTATG
ATGATCACAAAATGAGTCAAAAAAAAAGCATTAAACATCCATCACATACA
TCTGACTCAAAAGCGACAAGCACATAATTCTTACAAAAAGTTTAATCAAG
ATTTAAAAAAACTCTGAAACAAGTAACCCATGTTTTATTAAGTCTGGCAC
CGATTGAATCAAGCAAGACTGTTGGAGCAAAACACCTCAATAGTGTGAGA
GGACACAGAAGTGGAGCAAAATCAAAGTCAAACGTTCACGTTCCCTGCAG
CATAAAGTCCTTGTCAGAAGTGGGATTTGAACCCACGCCCACATACATGG
ACCAGAATACTCCCCACCCATCGGGGCGTTAGATGTTCTCTTGAGTCTGG
CGCCTTAGACCGCTCGGCCATCCTGACTGATGTGAGATGCAAGCCAAGTG
GTCGAGGCTTTATCGAGTGACCTGGGTCCAAAGCAAGGTGGCACACAAAA
TGCCAGGCAAAACTGTTTGAGGAAAACACCTCAATAGTGTGAGAGCACAC
CCAAGTGGAGCAAAATCAAAGTCAAACATTCACGTTCACTGCAGCATAAA
ATACTTGTCAGAAGTGGGATTTGAACCCACGCCCACATACATGGACCAGA
ATCCTCACCACCCATCGGGGCGTTAGATGTTCTCTTGAGTCTGGCGCCTT
AGACCGCTCGGCCATCCTGACTGATGTGAGGATGCAAGCCATGTGGTCGA
GGCTTTATCGAGTGACCTGGGTTCAAAGCTAGGTGGCACACAAAATGCCA
GGCAAAACTGTTTGAGGAAAACACCTCAATAGTGTGAGAGCACACCCAAG
TGGAGCAAAATCAAAGTCAAACATTCACGTTCCCTGCAGCATAAAGTCCT
TGTCAGAAGTGGGATTTGAACCCACGCCCACATACGTGGACCAGAATCCT
CACCACCCATCGGGGCGTTAGATGTTCCCTTGAGTCTGGCGCCTTAGACC
GCTCGGCCATCCTGACTGATGTGAGGAGGTGGCCATGTGGTCGAGGCTTT
ATCGAGTGACCGGGGTTCAAAGCTAGGCGGCACACAAAATGCCAGGCAAG
ACTGTTGGAGGAAAACACCTCAATAGTGTGAGAGCACTCAGAAGTGGAGC
AAAATCAAAGTCAAACATTCACGTTCCCTACAGCATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCATTCACGTTCCCTGCAGCATAAAGTCCTTGTCAGAAGTGGGATT
TGAACCCACGCCCACATACGTGGACCAGAATCCTCACCACCCATAGGGGC
GTTAGATGTTCTCTTGAGTCTGGCGCCTTAGACCGCTCGGCCATCCTGAC
TGATGTGAGATGCAAGCCATGTGGTCGAGGCTTTATCGAGTGAAATGGGT
TCAAAGCTAGGTGGCACACAAAATGCCAGGCAAAACTGTTTGAGGAAAAC
ACCTCAATAGTGTGAGAGCACACCCAAGTGGAGCAAAATCAAAGTCAAAC
ATTCACGTTCCCTGCAGCATAAAGTCCTTGTCAGAAGTGGGATTTGAACC
CACGCCCACATACGTGGACCAGAATCCTCACCACCCATCGGGGCGTTAGA
TGTTCTCTTGAGTCTGGCGCCTTAGACCGCTCGGCCATCCTGACTGATGT
GAGATCCAAGCCATGTGGTCGAGGCTTTATCGAGTGACCTGGGTTCAAAG
CTAGGTGGCACACAAAATGCCAGGCAAAACTGTTTGAGGAAAATACCTCA
ACACCCAAGTGGAGCAAAATCAAAGTCAATCATTCACGTTCCCTGCAGCA
TAAAGTCCTTGTCAGAAGTGGGATTTGAACCCACGCCCACATACGTGGAC
CAGAATCCTCACCACCCATCGGGGCGTTAGATGTTCTCTTGAGTCTGGCG
CCTTAGACCGCTCGGCCATCCTGACTGATGTGAGGAGGTGGCCATGTGGT
TGAGGCTGGATCGAGTGACCGGGGTTCAACGCTAGGCGGCACACAAAATG
CCAGGCAAGACTGTTTGAGGAAAACACCTCAATAGTGTGAGAGCACACCC
AAGTGGACCTGAATCCTCACCACCCATCGGGGCGTTAGATTTCTGTGTTT
GGTTATTGTTCCGTGGTAGCATCCACATGGTACTGATTAAGTCTTACGTT
TATTAGTATAAAATTGTGTGTTTGCCACGACCTGATTTAAGCCAAAATAC
TTGCTTTCATAAAGGCAGGTTAGGGATAAAAAAAAATTATGTAACAACAT
GCGAAGGATACGATTAATGCAAATGTACAGGTCGGATAAAAAAATTATCA
AAAGTGGAACATGGCAACAGGGTATTAAATTATAACCGATCAATACGTCA
CAGTGACACATTCGGTCGGTAAAACATTTTGATGTTATTCCAAACCTATT
TTGGGAAAACCCTGATCCGTGCTTGATGTCAGACGTTCACAACGTGAATG
TGATAAATTGCCCACGTTGCGGGCTGCAACAACCAAAGAGGCTGCAGTTG
CATTGGCCATGTCGAGATGCCTGGCCGCCCCAATTTAGTCAAAAAAAGTC
ATTTTCATTTTAAAAGTCACATTTTACATGCCAAACTAGTACAATGTATT
AAGTGTTCTCTTATTGTGGACAATGTTTTTTTACAAATCTTGCAAAATAT
ATTCCAATCCCCACACACTCCCAGGAGCTGTAGGAGCGGTCATTTTTCAA
TCCTGGTCCTCAAATTGAAATTGGCCGGAAAAAAAGATAAAATGTGTGTA
GTATCTGACTTGTTATAAGCCTAAAAGCGACACAATCAAGTTTAAAAAGA
AGCCATCTAATATGGGCGTATTTGCCAATATGTTCTTCGGATTCAAATTT
CAAGATGTTGGTATTATTTCTACAGATAGCTAAGTTTTTTGGGGCAAGTT
ATGCTACAACTTATTTCGATTTTTTGTTTGATTCTTGGCTGTTATGAAAG
CTGGTATTGATATAAAGATTCCTTTCTTGGGAAATACGAGAGGCAGTAGG
GGTTTGACACCAGTTCTGTCTATGTACGTAGAGTATAGTGGCGTGTAAGC
ATGTACATATTTATGATGATTAACCGTCGTTTGATTGAAGTTTGTTGTAA
ATAAATGACTAGAGTCGAAGAAAGTGGGCTCATGCAATCAGCCAGCTTAA
TTGGGGGAAAAGCAGACCGCATAACTTGAGCAGATTTTTTCATCGGATTG
AGCATATCCATGCTGTTTATGTGGTTTGATGTTTTGGTATATTCTAAACG
AAATTATTTTACCGTGGTTACCGTACTTTAAGTAACAAATGGATCGTAAC
CGAGCACTAGAACATTGAAGAATGGTTTTGACTCTCACGTTTGACATGGT
TAAAACTTGTTTACTTTCCCTCATTGCAGTTGTATTGTCTGATTGTTGTC
AATGCGTCGAATGCAGACGTCATTACCAAAGATGTTGCAGCAAAATCCAT
TCAAGTTGAAGATACCTCCGAGGACCGACTCTACTTCCAAGGTCCAGATT
ACACCATCAACCTCATTCCATTAGCAATCATCGTGAAAATCATTTTCGTC
ATCGGTACATCCCTTCATTTCACGGACGCCATTGGCTTTGTCCAGGAGTC
TAATTAGTCTTTTCCTATCTTTCAGGATATGTGATTAAATACATCACGGA
CGATTCCTCTCAGGAGATCACTGGCTATGCACCCGCCGACTCCGGCTACA
GCAGCTCCTTCCATGGCTCAGGTTCCAGCTACTCACCTCCAGCCGTGTCC
TACCAGCAACCCAGCTCCAGTTATGCCAGTCCCTCCAATTCTTACTCTGC
CCCCACCACCAACCACGGGTCCCCCAATCCTTCCTTCGTCTCATCTCAAT
CCAGCTACAGTTCTCCCACCTCCAAC
back to top
Synonyms
The feature 'xylosyltransferase 1-like' has the following synonyms
Synonym
Tk03783
Add to Basket