vesicle-associated membrane protein partial, maker-scaffold1588_size34843-snap-gene-0.12 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000007095 (supercontig:LSalAtl2s:LSalAtl2s3:880430:881669:1 gene:EMLSAG00000007095 transcript:EMLSAT00000007095 description:"maker-LSalAtl2s3-augustus-gene-8.30") HSP 1 Score: 94.7449 bits (234), Expect = 1.271e-26 Identity = 50/121 (41.32%), Postives = 83/121 (68.60%), Query Frame = 0
Query: 1 LDFVLETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSAPIIP 121
+D+ E+ + SS + Q +VD+V+ +MR+NV+KV++RD KL +LD RA NL + S+ F +S RL++KYWW+NLKMKLIIGG+ + +++ II +++ + G +D +T ++ I P
Sbjct: 1 MDYRYES--KNRSSPHFENVQNQVDEVVTIMRENVNKVIQRDEKLGDLDDRAANLEANSNSFAASSVRLRRKYWWENLKMKLIIGGIFITVIVFIIIVLVFEFNGSNND--HVTNTSSIRP 117
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000000407 (supercontig:LSalAtl2s:LSalAtl2s1064:131354:159067:1 gene:EMLSAG00000000407 transcript:EMLSAT00000000407 description:"snap_masked-LSalAtl2s1064-processed-gene-1.2") HSP 1 Score: 90.8929 bits (224), Expect = 1.644e-23 Identity = 42/86 (48.84%), Postives = 62/86 (72.09%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITI 98
+S RLQ+ Q +V +V+++MR NV+KVLERD KLSELD RAD+L +S F + +LK+K WW+N KM +I+ GV++ I +I +
Sbjct: 91 ASKRLQQAQAQVGEVVDIMRINVEKVLERDSKLSELDRRADDLQEGASQFQQQAVKLKRKLWWENAKMWIIL-GVLLLFFIAVIVL 175
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000010393 (supercontig:LSalAtl2s:LSalAtl2s68:1408979:1409257:-1 gene:EMLSAG00000010393 transcript:EMLSAT00000010393 description:"augustus_masked-LSalAtl2s68-processed-gene-14.0") HSP 1 Score: 80.8777 bits (198), Expect = 1.348e-21 Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 0
Query: 11 SYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMK 81
S S L+E +R+VD+V N+M+ NV+K+LERDGKL +L+ RAD L + F ++ R+K+K +WQN+KMK
Sbjct: 2 SKSDAHLEEXRRQVDEVQNIMKGNVEKMLERDGKLGQLEERADRLQEGTEQFHRSAVRIKRKQFWQNMKMK 72
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000009514 (supercontig:LSalAtl2s:LSalAtl2s612:212145:215065:1 gene:EMLSAG00000009514 transcript:EMLSAT00000009514 description:"augustus_masked-LSalAtl2s612-processed-gene-2.1") HSP 1 Score: 72.0182 bits (175), Expect = 2.683e-17 Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 0
Query: 6 ETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITII 96
E M ++ ++ + Q +VD+V+N+M NV++VLERD KL L+ RAD L + F + +K K+W +NLK +I GVV I++ ++
Sbjct: 27 EQMRQIQAARKMGQQQAQVDEVINIMHTNVEQVLERDSKLGALEERADALQDGCAQFEKQAAAMKNKFWLENLK-SMIAMGVVGVILLGLL 116
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000009513 (supercontig:LSalAtl2s:LSalAtl2s612:211386:211874:1 gene:EMLSAG00000009513 transcript:EMLSAT00000009513 description:"augustus_masked-LSalAtl2s612-processed-gene-2.0") HSP 1 Score: 71.633 bits (174), Expect = 3.761e-17 Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 0
Query: 24 VDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKM 80
VD+V+ +MR+NV+KVL+RD KLSELD RAD L +S F + +LK K+W QN+K
Sbjct: 46 VDEVVGIMRNNVEKVLDRDAKLSELDERADALQDGASQFEKQAGKLKNKFWLQNMKF 102
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|51704191|sp|P63026.2|VAMP2_BOVIN (RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2) HSP 1 Score: 100.523 bits (249), Expect = 1.478e-27 Identity = 45/73 (61.64%), Postives = 61/73 (83.56%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIG 85
S+ RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+NLKM +I+G
Sbjct: 28 SNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILG 100
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|51704188|sp|P63045.2|VAMP2_RAT (RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2 >gi|51704193|sp|P63044.2|VAMP2_MOUSE RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2) HSP 1 Score: 100.523 bits (249), Expect = 1.494e-27 Identity = 45/73 (61.64%), Postives = 61/73 (83.56%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIG 85
S+ RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+NLKM +I+G
Sbjct: 28 SNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILG 100
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|83288286|sp|Q9N0Y0.3|VAMP2_MACMU (RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2 >gi|288558837|sp|P63027.3|VAMP2_HUMAN RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2) HSP 1 Score: 100.523 bits (249), Expect = 1.494e-27 Identity = 45/73 (61.64%), Postives = 61/73 (83.56%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIG 85
S+ RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+NLKM +I+G
Sbjct: 28 SNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILG 100
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|6094391|sp|P47193.3|VAMP2_XENLA (RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=SYBII; AltName: Full=Synaptobrevin-2) HSP 1 Score: 99.3673 bits (246), Expect = 4.066e-27 Identity = 44/73 (60.27%), Postives = 61/73 (83.56%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIG 85
S+ RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N+KM +I+G
Sbjct: 26 SNRRLQQTQAQVDEVVDIMRVNVDKVLERDTKLSELDDRADALQAGASQFETSAAKLKRKYWWKNMKMMIIMG 98
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|160332380|sp|Q0V7N0.2|VAMP1_BOVIN (RecName: Full=Vesicle-associated membrane protein 1; Short=VAMP-1; AltName: Full=Synaptobrevin-1) HSP 1 Score: 98.5969 bits (244), Expect = 1.053e-26 Identity = 41/77 (53.25%), Postives = 61/77 (79.22%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVV 89
S+ RLQ+TQ +V++V+++MR NVDKVLERD KLSELD RAD L + +S F +++ +LK+KYWW+N KM +++G +
Sbjct: 30 SNRRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICA 106
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|2842651|sp|Q62442.1|VAMP1_MOUSE (RecName: Full=Vesicle-associated membrane protein 1; Short=VAMP-1; AltName: Full=Synaptobrevin-1) HSP 1 Score: 98.5969 bits (244), Expect = 1.137e-26 Identity = 41/77 (53.25%), Postives = 61/77 (79.22%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVV 89
S+ RLQ+TQ +V++V+++MR NVDKVLERD KLSELD RAD L + +S F +++ +LK+KYWW+N KM +++G +
Sbjct: 30 SNRRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICA 106
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|135093|sp|P23763.1|VAMP1_HUMAN (RecName: Full=Vesicle-associated membrane protein 1; Short=VAMP-1; AltName: Full=Synaptobrevin-1) HSP 1 Score: 96.6709 bits (239), Expect = 6.223e-26 Identity = 40/77 (51.95%), Postives = 61/77 (79.22%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVV 89
S+ RLQ+TQ +V++V++++R NVDKVLERD KLSELD RAD L + +S F +++ +LK+KYWW+N KM +++G +
Sbjct: 30 SNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICA 106
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|160332381|sp|Q63666.2|VAMP1_RAT (RecName: Full=Vesicle-associated membrane protein 1; Short=VAMP-1; AltName: Full=Synaptobrevin-1) HSP 1 Score: 96.6709 bits (239), Expect = 6.223e-26 Identity = 41/77 (53.25%), Postives = 61/77 (79.22%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVV 89
S+ RLQ+TQ +V++V+++MR NVDKVLERD KLSELD RAD L + +S F +++ +LK+KYWW+N KM +++G +
Sbjct: 30 SNRRLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASVFESSAAKLKRKYWWKNCKMMIMLGAICA 106
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|2501082|sp|Q15836.3|VAMP3_HUMAN (RecName: Full=Vesicle-associated membrane protein 3; Short=VAMP-3; AltName: Full=Cellubrevin; Short=CEB; AltName: Full=Synaptobrevin-3) HSP 1 Score: 95.9005 bits (237), Expect = 8.335e-26 Identity = 44/75 (58.67%), Postives = 60/75 (80.00%), Query Frame = 0
Query: 9 ASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLI 83
A++ S+ RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM I
Sbjct: 7 AATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWAI 81
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|51704187|sp|P63025.1|VAMP3_RAT (RecName: Full=Vesicle-associated membrane protein 3; Short=VAMP-3; AltName: Full=Cellubrevin; Short=CEB; AltName: Full=Synaptobrevin-3 >gi|51704190|sp|P63024.1|VAMP3_MOUSE RecName: Full=Vesicle-associated membrane protein 3; Short=VAMP-3; AltName: Full=Cellubrevin; Short=CEB; AltName: Full=Synaptobrevin-3) HSP 1 Score: 95.5153 bits (236), Expect = 1.178e-25 Identity = 43/72 (59.72%), Postives = 59/72 (81.94%), Query Frame = 0
Query: 9 ASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKM 80
A++ S+ RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM
Sbjct: 11 AATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKM 82
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1344805246|ref|XP_023945273.1| (synaptobrevin-1-like [Bicyclus anynana]) HSP 1 Score: 113.235 bits (282), Expect = 7.095e-30 Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 0
Query: 6 ETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSAPI 119
ET S RL +TQ +VD+V+ +MRDN+DKVLERD KLSELD RAD L + F + +LK+KYWWQNLKM LIIG V V ++I II+V T G S P A +
Sbjct: 6 ETQGPRVSDKRLAQTQAKVDEVVGIMRDNIDKVLERDQKLSELDDRADALQVGAGQFQQQAGKLKRKYWWQNLKMMLIIGAVGVVLLI----IIIVWATSGSSGSAPAPAPATV 115
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|706138933|ref|XP_010202551.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Colius striatus]) HSP 1 Score: 110.923 bits (276), Expect = 3.325e-29 Identity = 53/89 (59.55%), Postives = 70/89 (78.65%), Query Frame = 0
Query: 9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITII 96
AS+ SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V I+I II
Sbjct: 20 ASNVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIII 108
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|677986847|ref|XP_009074514.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Acanthisitta chloris]) HSP 1 Score: 110.923 bits (276), Expect = 3.974e-29 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0
Query: 9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
A+S +SN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V I+I II+
Sbjct: 20 ATSVASNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|768447963|ref|XP_011565989.1| (PREDICTED: synaptobrevin-1-like [Plutella xylostella]) HSP 1 Score: 110.923 bits (276), Expect = 4.993e-29 Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSA 117
S RL +TQ +VD+V+ +MR NV+KVLERD KLSELD RAD L + F + +LK+KYWWQN+KM LIIG + V+ II I+ +GGGS P +T S+
Sbjct: 13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAEQFEQQAGKLKRKYWWQNMKMMLIIG--AIGAVLLIIIIVWAIPSGGGSSAPAVTPSS 115
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|768425763|ref|XP_011553898.1| (PREDICTED: synaptobrevin-1-like [Plutella xylostella]) HSP 1 Score: 110.538 bits (275), Expect = 6.077e-29 Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 0
Query: 13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTS 116
S RL +TQ +VD+V+ +MR NV+KVLERD KLSELD RAD L + F + +LK+KYWWQN+KM LIIG + V+ II I+ +GGGS P +T S
Sbjct: 13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAEQFEQQAGKLKRKYWWQNMKMMLIIG--AIGAVLLIIIIVWAIPSGGGSSAPAVTPS 114
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|675629580|ref|XP_008943286.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Merops nubicus]) HSP 1 Score: 110.153 bits (274), Expect = 6.288e-29 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0
Query: 9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
A++ SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V I+I II+
Sbjct: 20 ATNVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1215457491|gb|OXB58674.1| (hypothetical protein ASZ78_003641 [Callipepla squamata]) HSP 1 Score: 111.309 bits (277), Expect = 1.034e-28 Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 0
Query: 9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
A+S SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V I+I IIT
Sbjct: 36 ATSVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCTVILIIIIT 125
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|701353456|ref|XP_009983779.1| (PREDICTED: vesicle-associated membrane protein 2-like, partial [Tauraco erythrolophus] >gi|701397022|ref|XP_009967941.1| PREDICTED: vesicle-associated membrane protein 2, partial [Tyto alba]) HSP 1 Score: 109.383 bits (272), Expect = 1.737e-28 Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 0
Query: 9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
A++ SSN RLQ+TQ VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V I+I II+
Sbjct: 20 ATNVSSNKRLQQTQARVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|704317515|ref|XP_010167975.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Antrostomus carolinensis]) HSP 1 Score: 108.997 bits (271), Expect = 1.895e-28 Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 0
Query: 9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
A++ SSN RLQ+TQ VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V I+I II+
Sbjct: 20 ATNVSSNKRLQQTQARVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1215490357|gb|OXB83522.1| (hypothetical protein H355_006369 [Colinus virginianus]) HSP 1 Score: 111.309 bits (277), Expect = 1.958e-28 Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 0
Query: 9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
A+S SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V I+I IIT
Sbjct: 36 ATSVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCTVILIIIIT 125 The following BLAST results are available for this feature:
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of vesicle-associated membrane protein partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1588_size34843:6191..6915+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1588_size34843-snap-gene-0.12 ID=maker-scaffold1588_size34843-snap-gene-0.12|Name=vesicle-associated membrane protein partial|organism=Tigriopus kingsejongensis|type=gene|length=725bp|location=Sequence derived from alignment at scaffold1588_size34843:6191..6915+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'vesicle-associated membrane protein partial' has the following synonyms
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