vesicle-associated membrane protein partial, maker-scaffold1588_size34843-snap-gene-0.12 (gene) Tigriopus kingsejongensis

Overview


Name	vesicle-associated membrane protein partial
Unique Name	maker-scaffold1588_size34843-snap-gene-0.12
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000007095 (supercontig:LSalAtl2s:LSalAtl2s3:880430:881669:1 gene:EMLSAG00000007095 transcript:EMLSAT00000007095 description:"maker-LSalAtl2s3-augustus-gene-8.30")

HSP 1 Score: 94.7449 bits (234), Expect = 1.271e-26
Identity = 50/121 (41.32%), Postives = 83/121 (68.60%), Query Frame = 0

Query:    1 LDFVLETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSAPIIP 121
            +D+  E+   + SS   +  Q +VD+V+ +MR+NV+KV++RD KL +LD RA NL + S+ F  +S RL++KYWW+NLKMKLIIGG+ + +++ II +++ +  G  +D   +T ++ I P
Sbjct:    1 MDYRYES--KNRSSPHFENVQNQVDEVVTIMRENVNKVIQRDEKLGDLDDRAANLEANSNSFAASSVRLRRKYWWENLKMKLIIGGIFITVIVFIIIVLVFEFNGSNND--HVTNTSSIRP 117

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BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000000407 (supercontig:LSalAtl2s:LSalAtl2s1064:131354:159067:1 gene:EMLSAG00000000407 transcript:EMLSAT00000000407 description:"snap_masked-LSalAtl2s1064-processed-gene-1.2")

HSP 1 Score: 90.8929 bits (224), Expect = 1.644e-23
Identity = 42/86 (48.84%), Postives = 62/86 (72.09%), Query Frame = 0

Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITI 98
            +S RLQ+ Q +V +V+++MR NV+KVLERD KLSELD RAD+L   +S F   + +LK+K WW+N KM +I+ GV++   I +I +
Sbjct:   91 ASKRLQQAQAQVGEVVDIMRINVEKVLERDSKLSELDRRADDLQEGASQFQQQAVKLKRKLWWENAKMWIIL-GVLLLFFIAVIVL 175

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BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000010393 (supercontig:LSalAtl2s:LSalAtl2s68:1408979:1409257:-1 gene:EMLSAG00000010393 transcript:EMLSAT00000010393 description:"augustus_masked-LSalAtl2s68-processed-gene-14.0")

HSP 1 Score: 80.8777 bits (198), Expect = 1.348e-21
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 0

Query:   11 SYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMK 81
            S S   L+E +R+VD+V N+M+ NV+K+LERDGKL +L+ RAD L   +  F  ++ R+K+K +WQN+KMK
Sbjct:    2 SKSDAHLEEXRRQVDEVQNIMKGNVEKMLERDGKLGQLEERADRLQEGTEQFHRSAVRIKRKQFWQNMKMK 72

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BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000009514 (supercontig:LSalAtl2s:LSalAtl2s612:212145:215065:1 gene:EMLSAG00000009514 transcript:EMLSAT00000009514 description:"augustus_masked-LSalAtl2s612-processed-gene-2.1")

HSP 1 Score: 72.0182 bits (175), Expect = 2.683e-17
Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 0

Query:    6 ETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITII 96
            E M    ++ ++ + Q +VD+V+N+M  NV++VLERD KL  L+ RAD L    + F   +  +K K+W +NLK  +I  GVV  I++ ++
Sbjct:   27 EQMRQIQAARKMGQQQAQVDEVINIMHTNVEQVLERDSKLGALEERADALQDGCAQFEKQAAAMKNKFWLENLK-SMIAMGVVGVILLGLL 116

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BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000009513 (supercontig:LSalAtl2s:LSalAtl2s612:211386:211874:1 gene:EMLSAG00000009513 transcript:EMLSAT00000009513 description:"augustus_masked-LSalAtl2s612-processed-gene-2.0")

HSP 1 Score: 71.633 bits (174), Expect = 3.761e-17
Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 0

Query:   24 VDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKM 80
            VD+V+ +MR+NV+KVL+RD KLSELD RAD L   +S F   + +LK K+W QN+K 
Sbjct:   46 VDEVVGIMRNNVEKVLDRDAKLSELDERADALQDGASQFEKQAGKLKNKFWLQNMKF 102

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|75077160|sp|Q4R8T0.1|VAMP3_MACFA (RecName: Full=Vesicle-associated membrane protein 3; Short=VAMP-3; AltName: Full=Synaptobrevin-3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.676e-25
Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = 0

Query:    9 ASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLI 83
            A+  S+ RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM  I
Sbjct:    7 AAPGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWAI 81

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|1174499|sp|P47194.1|SYB_DORPE (RecName: Full=Synaptobrevin)

HSP 1 Score: 94.7449 bits (234), Expect = 4.358e-25
Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = 0

Query:   14 SNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVA 90
            S RLQ+TQ +V++V+++MR NVDKVLERD K+SELD RAD L + +S F  ++ +LK+K+WW+N KM +I+GG+V  
Sbjct:   38 SKRLQQTQAQVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQFEASAGKLKRKFWWKNCKMMIILGGIVAV 114

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|135096|sp|P13701.1|SYB_TORCA (RecName: Full=Synaptobrevin; AltName: Full=Synaptic vesicle-associated integral membrane protein; AltName: Full=VAMP-1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.666e-24
Identity = 39/72 (54.17%), Postives = 59/72 (81.94%), Query Frame = 0

Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLII 84
            S+ RLQ+TQ +V++V++++R NVDKVLERD KLSELD RAD L + +S F +++ +LK+KYWW+N KM +++
Sbjct:   32 SNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIML 103

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|122136203|sp|Q2KJD2.1|VAMP3_BOVIN (RecName: Full=Vesicle-associated membrane protein 3; Short=VAMP-3; AltName: Full=Synaptobrevin-3)

HSP 1 Score: 91.6633 bits (226), Expect = 3.226e-24
Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 0

Query:   16 RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKM 80
            RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM
Sbjct:   18 RLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKM 82

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|81175197|sp|P18489.3|SYB_DROME (RecName: Full=Synaptobrevin)

HSP 1 Score: 93.2041 bits (230), Expect = 4.099e-24
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 0

Query:   10 SSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILV 101
            ++ +  +LQ+TQ +VD+V+ +MR NV+KVLERD KLSEL  RAD L   +S F   + +LK+K WW N+KM +I+G  V+A+V+ II ++ V
Sbjct:   41 NNAAQKKLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANMKMMIILG--VIAVVLLIIVLVSV 130

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|549022|sp|P35589.1|SYB_APLCA (RecName: Full=Synaptobrevin)

HSP 1 Score: 92.8189 bits (229), Expect = 1.012e-23
Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 0

Query:   14 SNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSD 109
            S RLQ+TQ +VD+V+++MR NV+KVL+RD K+S+LD RA+ L + +S F  ++ +LK+KYWW+N KM LI+G ++  IVI II  ++     GG D
Sbjct:   19 SKRLQQTQAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQAGASQFEASAGKLKRKYWWKNCKMMLILGAIIGVIVIIIIVWVVTSQDSGGDD 114

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|74846112|sp|Q60WU2.1|SYB1_CAEBR (RecName: Full=Synaptobrevin-1; AltName: Full=Synaptobrevin-related protein 1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.368e-23
Identity = 39/72 (54.17%), Postives = 56/72 (77.78%), Query Frame = 0

Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLII 84
            S+ RLQ+TQ +VD+V+ +M+ NV+KVLERD KLS+LD RAD L   +S F  ++  LK+KYWW+N+KM +I+
Sbjct:   19 SNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWKNIKMMIIM 90

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|74956515|sp|O02495.1|SYB1_CAEEL (RecName: Full=Synaptobrevin-1; AltName: Full=Synaptobrevin-related protein 1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.262e-22
Identity = 39/72 (54.17%), Postives = 56/72 (77.78%), Query Frame = 0

Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLII 84
            S+ RLQ+TQ +VD+V+ +M+ NV+KVLERD KLS+LD RAD L   +S F  ++  LK+KYWW+N+KM +I+
Sbjct:   20 SNKRLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWKNIKMMIIM 91

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|25091339|sp|Q27236.1|SYBL_SCHMA (RecName: Full=Synaptobrevin-like protein)

HSP 1 Score: 84.7297 bits (208), Expect = 4.216e-21
Identity = 37/68 (54.41%), Postives = 54/68 (79.41%), Query Frame = 0

Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKM 80
            ++ RLQ+TQ +V++V+++MR NVDKVLERD  LSELD RAD L + +S F  ++ +LK+K+WW+N KM
Sbjct:   15 TNKRLQQTQAQVNEVVDIMRVNVDKVLERDKNLSELDGRADALQAGASQFEASAGKLKRKFWWKNCKM 82

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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|122135927|sp|Q2KHY2.1|VAMP5_BOVIN (RecName: Full=Vesicle-associated membrane protein 5; Short=VAMP-5)

HSP 1 Score: 70.8626 bits (172), Expect = 6.976e-16
Identity = 38/109 (34.86%), Postives = 65/109 (59.63%), Query Frame = 0

Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIG---GVVVAIVITIITIILVKTTGGGSDDPPLTTSAP 118
            +   L+  QR+ D+V  +M +N DKVLERDGKL+EL+ R+D L   SS F  T+  L +K  W+N + ++ +G   G+ + I++ ++ +I +  +  GS  P +  + P
Sbjct:    2 AGKELERCQRQADEVTEIMLNNFDKVLERDGKLAELEQRSDQLLDMSSAFSKTTKTLAQKKRWENARCRIYMGLAVGIALLILLIVLLVIFLPQSSKGSSAPQVQDAGP 110

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BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1344805246|ref|XP_023945273.1| (synaptobrevin-1-like [Bicyclus anynana])

HSP 1 Score: 113.235 bits (282), Expect = 7.095e-30
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 0

Query:    6 ETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSAPI 119
            ET     S  RL +TQ +VD+V+ +MRDN+DKVLERD KLSELD RAD L   +  F   + +LK+KYWWQNLKM LIIG V V ++I    II+V  T G S   P    A +
Sbjct:    6 ETQGPRVSDKRLAQTQAKVDEVVGIMRDNIDKVLERDQKLSELDDRADALQVGAGQFQQQAGKLKRKYWWQNLKMMLIIGAVGVVLLI----IIIVWATSGSSGSAPAPAPATV 115

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BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|706138933|ref|XP_010202551.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Colius striatus])

HSP 1 Score: 110.923 bits (276), Expect = 3.325e-29
Identity = 53/89 (59.55%), Postives = 70/89 (78.65%), Query Frame = 0

Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITII 96
            AS+ SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II
Sbjct:   20 ASNVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIII 108

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BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|677986847|ref|XP_009074514.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Acanthisitta chloris])

HSP 1 Score: 110.923 bits (276), Expect = 3.974e-29
Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0

Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A+S +SN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II+
Sbjct:   20 ATSVASNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109

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BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|768447963|ref|XP_011565989.1| (PREDICTED: synaptobrevin-1-like [Plutella xylostella])

HSP 1 Score: 110.923 bits (276), Expect = 4.993e-29
Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 0

Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSA 117
            S  RL +TQ +VD+V+ +MR NV+KVLERD KLSELD RAD L   +  F   + +LK+KYWWQN+KM LIIG   +  V+ II I+    +GGGS  P +T S+
Sbjct:   13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAEQFEQQAGKLKRKYWWQNMKMMLIIG--AIGAVLLIIIIVWAIPSGGGSSAPAVTPSS 115

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BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|768425763|ref|XP_011553898.1| (PREDICTED: synaptobrevin-1-like [Plutella xylostella])

HSP 1 Score: 110.538 bits (275), Expect = 6.077e-29
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 0

Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTS 116
            S  RL +TQ +VD+V+ +MR NV+KVLERD KLSELD RAD L   +  F   + +LK+KYWWQN+KM LIIG   +  V+ II I+    +GGGS  P +T S
Sbjct:   13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAEQFEQQAGKLKRKYWWQNMKMMLIIG--AIGAVLLIIIIVWAIPSGGGSSAPAVTPS 114

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BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|675629580|ref|XP_008943286.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Merops nubicus])

HSP 1 Score: 110.153 bits (274), Expect = 6.288e-29
Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0

Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A++ SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II+
Sbjct:   20 ATNVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109

[Close]

BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1215457491|gb|OXB58674.1| (hypothetical protein ASZ78_003641 [Callipepla squamata])

HSP 1 Score: 111.309 bits (277), Expect = 1.034e-28
Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 0

Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A+S SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I IIT
Sbjct:   36 ATSVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCTVILIIIIT 125

[Close]

BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|701353456|ref|XP_009983779.1| (PREDICTED: vesicle-associated membrane protein 2-like, partial [Tauraco erythrolophus] >gi|701397022|ref|XP_009967941.1| PREDICTED: vesicle-associated membrane protein 2, partial [Tyto alba])

HSP 1 Score: 109.383 bits (272), Expect = 1.737e-28
Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 0

Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A++ SSN RLQ+TQ  VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II+
Sbjct:   20 ATNVSSNKRLQQTQARVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109

[Close]

BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|704317515|ref|XP_010167975.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Antrostomus carolinensis])

HSP 1 Score: 108.997 bits (271), Expect = 1.895e-28
Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 0

Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A++ SSN RLQ+TQ  VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II+
Sbjct:   20 ATNVSSNKRLQQTQARVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109

[Close]

BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1215490357|gb|OXB83522.1| (hypothetical protein H355_006369 [Colinus virginianus])

HSP 1 Score: 111.309 bits (277), Expect = 1.958e-28
Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 0

Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A+S SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I IIT
Sbjct:   36 ATSVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCTVILIIIIT 125

The following BLAST results are available for this feature:

BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
BLAST of vesicle-associated membrane protein partial vs. SwissProt
BLAST of vesicle-associated membrane protein partial vs. nr

BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5


Match Name	E-value	Identity	Description
EMLSAG00000007095	1.271e-26	41.32	supercontig:LSalAtl2s:LSalAtl2s3:880430:881669:1 g...	[more]
EMLSAG00000000407	1.644e-23	48.84	supercontig:LSalAtl2s:LSalAtl2s1064:131354:159067:...	[more]
EMLSAG00000010393	1.348e-21	49.30	supercontig:LSalAtl2s:LSalAtl2s68:1408979:1409257:...	[more]
EMLSAG00000009514	2.683e-17	37.36	supercontig:LSalAtl2s:LSalAtl2s612:212145:215065:1...	[more]
EMLSAG00000009513	3.761e-17	54.39	supercontig:LSalAtl2s:LSalAtl2s612:211386:211874:1...	[more]

BLAST of vesicle-associated membrane protein partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|75077160\|sp\|Q4R8T0.1\|VAMP3_MACFA	1.676e-25	58.67	RecName: Full=Vesicle-associated membrane protein ...	[more]
gi\|1174499\|sp\|P47194.1\|SYB_DORPE	4.358e-25	54.55	RecName: Full=Synaptobrevin	[more]
gi\|135096\|sp\|P13701.1\|SYB_TORCA	2.666e-24	54.17	RecName: Full=Synaptobrevin; AltName: Full=Synapti...	[more]
gi\|122136203\|sp\|Q2KJD2.1\|VAMP3_BOVIN	3.226e-24	63.08	RecName: Full=Vesicle-associated membrane protein ...	[more]
gi\|81175197\|sp\|P18489.3\|SYB_DROME	4.099e-24	47.83	RecName: Full=Synaptobrevin	[more]
gi\|549022\|sp\|P35589.1\|SYB_APLCA	1.012e-23	48.96	RecName: Full=Synaptobrevin	[more]
gi\|74846112\|sp\|Q60WU2.1\|SYB1_CAEBR	5.368e-23	54.17	RecName: Full=Synaptobrevin-1; AltName: Full=Synap...	[more]
gi\|74956515\|sp\|O02495.1\|SYB1_CAEEL	1.262e-22	54.17	RecName: Full=Synaptobrevin-1; AltName: Full=Synap...	[more]
gi\|25091339\|sp\|Q27236.1\|SYBL_SCHMA	4.216e-21	54.41	RecName: Full=Synaptobrevin-like protein	[more]
gi\|122135927\|sp\|Q2KHY2.1\|VAMP5_BOVIN	6.976e-16	34.86	RecName: Full=Vesicle-associated membrane protein ...	[more]

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BLAST of vesicle-associated membrane protein partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1344805246\|ref\|XP_023945273.1\|	7.095e-30	50.88	synaptobrevin-1-like [Bicyclus anynana]	[more]
gi\|706138933\|ref\|XP_010202551.1\|	3.325e-29	59.55	PREDICTED: vesicle-associated membrane protein 2, ...	[more]
gi\|677986847\|ref\|XP_009074514.1\|	3.974e-29	57.78	PREDICTED: vesicle-associated membrane protein 2, ...	[more]
gi\|768447963\|ref\|XP_011565989.1\|	4.993e-29	51.43	PREDICTED: synaptobrevin-1-like [Plutella xylostel...	[more]
gi\|768425763\|ref\|XP_011553898.1\|	6.077e-29	51.92	PREDICTED: synaptobrevin-1-like [Plutella xylostel...	[more]
gi\|675629580\|ref\|XP_008943286.1\|	6.288e-29	57.78	PREDICTED: vesicle-associated membrane protein 2, ...	[more]
gi\|1215457491\|gb\|OXB58674.1\|	1.034e-28	60.00	hypothetical protein ASZ78_003641 [Callipepla squa...	[more]
gi\|701353456\|ref\|XP_009983779.1\|	1.737e-28	57.78	PREDICTED: vesicle-associated membrane protein 2-l...	[more]
gi\|704317515\|ref\|XP_010167975.1\|	1.895e-28	57.78	PREDICTED: vesicle-associated membrane protein 2, ...	[more]
gi\|1215490357\|gb\|OXB83522.1\|	1.958e-28	60.00	hypothetical protein H355_006369 [Colinus virginia...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1588_size34843	supercontig	scaffold1588_size34843:6191..6915 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold1588_size34843-snap-gene-0.12-mRNA-1	maker-scaffold1588_size34843-snap-gene-0.12-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1588_size34843:6191..6915+

gene from alignment at scaffold1588_size34843:6191..6915+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1588_size34843-snap-gene-0.12 ID=maker-scaffold1588_size34843-snap-gene-0.12|Name=vesicle-associated membrane protein partial|organism=Tigriopus kingsejongensis|type=gene|length=725bp|location=Sequence derived from alignment at scaffold1588_size34843:6191..6915+ (Tigriopus kingsejongensis)
CGCCCACTTGAGACTGTTCACCTAGCTGGGCGACCAAAGATAAGCCCCAC
TTCAGCTGTGTGTGTCTCCCCTAGTCCGTAAGAATTTGGCTCCGATAAGG
ACACACCAAAACACTTGGATTTCGTTCTCGAGACCATGGCTTCCAGCTAC
AGCTCCAACCGTCTCCAAGAGACTCAACGCGAGGTGGGTATGGGGCACAT
GGGTGGAATATATATACATGGGTCGATACAAGCTATGTCCGTGTGGTTTA
GGTAGATGACGTCTTGAACGTTATGCGTGACAATGTGGACAAGGTCCTGG
AGCGCGATGGGAAGCTCTCCGAGCTGGATACACGGGCGGACAACCTCAAC
TCGGCCTCTAGTCACTTTGTCACCACGTCCACGCGCTTGAAGAAGAAGTA
CTGGTGGCAAAACCTCAAGATGAAACTCATCATCGGAGGCGTGGTCGTGG
CCATCGTGATCACCATCATCACGATCATTCTGGTCAAGACCACCGGAGGC
GGGAGTGACGACCCTCCGCTGACCACTTCAGCACCCATCATTCCAGAATA
GGGGTAGAGCCGTATTCGCCCCGACTGTGCATCCTATTTAACCTATTGGA
CCTAAAAAAATACCGAAGCAGAAACTCCCGAGGCGATTTCCACCCGAGGC
AGCGGTCTACGGACCCGCCTCGGGAGTGGTCGACTCGGCGAATGCCCGTT
GTAATATGAAACTTTTGTCAACACA

Synonyms

The feature 'vesicle-associated membrane protein partial' has the following synonyms


Synonym
Tk02929

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