vesicle-associated membrane protein partial, maker-scaffold1588_size34843-snap-gene-0.12 (gene) Tigriopus kingsejongensis

Overview
Namevesicle-associated membrane protein partial
Unique Namemaker-scaffold1588_size34843-snap-gene-0.12
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000007095 (supercontig:LSalAtl2s:LSalAtl2s3:880430:881669:1 gene:EMLSAG00000007095 transcript:EMLSAT00000007095 description:"maker-LSalAtl2s3-augustus-gene-8.30")

HSP 1 Score: 94.7449 bits (234), Expect = 1.271e-26
Identity = 50/121 (41.32%), Postives = 83/121 (68.60%), Query Frame = 0 
Query:    1 LDFVLETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSAPIIP 121
            +D+  E+   + SS   +  Q +VD+V+ +MR+NV+KV++RD KL +LD RA NL + S+ F  +S RL++KYWW+NLKMKLIIGG+ + +++ II +++ +  G  +D   +T ++ I P
Sbjct:    1 MDYRYES--KNRSSPHFENVQNQVDEVVTIMRENVNKVIQRDEKLGDLDDRAANLEANSNSFAASSVRLRRKYWWENLKMKLIIGGIFITVIVFIIIVLVFEFNGSNND--HVTNTSSIRP 117
[Close]
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000000407 (supercontig:LSalAtl2s:LSalAtl2s1064:131354:159067:1 gene:EMLSAG00000000407 transcript:EMLSAT00000000407 description:"snap_masked-LSalAtl2s1064-processed-gene-1.2")

HSP 1 Score: 90.8929 bits (224), Expect = 1.644e-23
Identity = 42/86 (48.84%), Postives = 62/86 (72.09%), Query Frame = 0 
Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITI 98
            +S RLQ+ Q +V +V+++MR NV+KVLERD KLSELD RAD+L   +S F   + +LK+K WW+N KM +I+ GV++   I +I +
Sbjct:   91 ASKRLQQAQAQVGEVVDIMRINVEKVLERDSKLSELDRRADDLQEGASQFQQQAVKLKRKLWWENAKMWIIL-GVLLLFFIAVIVL 175
[Close]
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000010393 (supercontig:LSalAtl2s:LSalAtl2s68:1408979:1409257:-1 gene:EMLSAG00000010393 transcript:EMLSAT00000010393 description:"augustus_masked-LSalAtl2s68-processed-gene-14.0")

HSP 1 Score: 80.8777 bits (198), Expect = 1.348e-21
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 0 
Query:   11 SYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMK 81
            S S   L+E +R+VD+V N+M+ NV+K+LERDGKL +L+ RAD L   +  F  ++ R+K+K +WQN+KMK
Sbjct:    2 SKSDAHLEEXRRQVDEVQNIMKGNVEKMLERDGKLGQLEERADRLQEGTEQFHRSAVRIKRKQFWQNMKMK 72
[Close]
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000009514 (supercontig:LSalAtl2s:LSalAtl2s612:212145:215065:1 gene:EMLSAG00000009514 transcript:EMLSAT00000009514 description:"augustus_masked-LSalAtl2s612-processed-gene-2.1")

HSP 1 Score: 72.0182 bits (175), Expect = 2.683e-17
Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 0 
Query:    6 ETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITII 96
            E M    ++ ++ + Q +VD+V+N+M  NV++VLERD KL  L+ RAD L    + F   +  +K K+W +NLK  +I  GVV  I++ ++
Sbjct:   27 EQMRQIQAARKMGQQQAQVDEVINIMHTNVEQVLERDSKLGALEERADALQDGCAQFEKQAAAMKNKFWLENLK-SMIAMGVVGVILLGLL 116
[Close]
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Match: EMLSAG00000009513 (supercontig:LSalAtl2s:LSalAtl2s612:211386:211874:1 gene:EMLSAG00000009513 transcript:EMLSAT00000009513 description:"augustus_masked-LSalAtl2s612-processed-gene-2.0")

HSP 1 Score: 71.633 bits (174), Expect = 3.761e-17
Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = 0 
Query:   24 VDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKM 80
            VD+V+ +MR+NV+KVL+RD KLSELD RAD L   +S F   + +LK K+W QN+K 
Sbjct:   46 VDEVVGIMRNNVEKVLDRDAKLSELDERADALQDGASQFEKQAGKLKNKFWLQNMKF 102
[Close]
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|13124594|sp|Q9Z2J5.1|VAMP5_RAT (RecName: Full=Vesicle-associated membrane protein 5; Short=VAMP-5; AltName: Full=Myobrevin)

HSP 1 Score: 67.3958 bits (163), Expect = 1.304e-14
Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 
Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVA 90
            +   L+  QR+ D V  +M +N DKVLERDGKLSEL  R+D L   SS F  T+  L ++  W+N++ ++ +G  V  
Sbjct:    2 AGKELERCQRQADQVTEIMLNNFDKVLERDGKLSELQQRSDQLLDMSSAFSKTTKTLAQQKRWENIRCRVYLGLAVAG 79
[Close]
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|1711414|sp|P33328.2|SNC2_YEAST (RecName: Full=Synaptobrevin homolog 2)

HSP 1 Score: 66.6254 bits (161), Expect = 2.792e-14
Identity = 27/76 (35.53%), Postives = 52/76 (68.42%), Query Frame = 0 
Query:    9 ASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLII 84
            A+  S N+    ++E+DD + +MRDN++KV ER  +L+ ++ +ADNL  ++  F   + R++K+ WW++LKM++ +
Sbjct:   20 ANPNSQNKTAALRQEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAISAQGFKRGANRVRKQMWWKDLKMRMCL 95
[Close]
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|55976764|sp|Q9BV40.1|VAMP8_HUMAN (RecName: Full=Vesicle-associated membrane protein 8; Short=VAMP-8; AltName: Full=Endobrevin; Short=EDB >gi|83288287|sp|Q5REQ5.1|VAMP8_PONAB RecName: Full=Vesicle-associated membrane protein 8; Short=VAMP-8; AltName: Full=Endobrevin; Short=EDB)

HSP 1 Score: 65.855 bits (159), Expect = 4.494e-14
Identity = 28/80 (35.00%), Postives = 51/80 (63.75%), Query Frame = 0 
Query:    5 LETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLII 84
            +E  +    ++R++  Q EV+ V N+M  NV+++L R   L  L  + ++L + S HF TTS ++ +K+WW+N+KM ++I
Sbjct:    1 MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNVKMIVLI 80
[Close]
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|55976645|sp|O70404.1|VAMP8_MOUSE (RecName: Full=Vesicle-associated membrane protein 8; Short=VAMP-8; AltName: Full=Endobrevin; Short=Edb)

HSP 1 Score: 65.855 bits (159), Expect = 4.707e-14
Identity = 28/76 (36.84%), Postives = 49/76 (64.47%), Query Frame = 0 
Query:    5 LETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKM 80
            +E  + S  ++R++  Q EV+ V N+M  NV+++L R   L  L  + ++L + S HF TTS ++ +K+WW+N+KM
Sbjct:    1 MEEASGSAGNDRVRNLQSEVEGVKNIMTQNVERILSRGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWWKNVKM 76
[Close]
BLAST of vesicle-associated membrane protein partial vs. SwissProt
Match: gi|401107|sp|P31109.1|SNC1_YEAST (RecName: Full=Synaptobrevin homolog 1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.506e-13
Identity = 28/71 (39.44%), Postives = 48/71 (67.61%), Query Frame = 0 
Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLI 83
            S +R  E Q E+DD + +MRDN++KV ER  +L+ ++ +ADNL  ++  F   + R++K  W+++LKMK+ 
Sbjct:   25 SKSRTAELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGFKRGANRVRKAMWYKDLKMKMC 95
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1344805246|ref|XP_023945273.1| (synaptobrevin-1-like [Bicyclus anynana])

HSP 1 Score: 113.235 bits (282), Expect = 7.095e-30
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 0 
Query:    6 ETMASSYSSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSAPI 119
            ET     S  RL +TQ +VD+V+ +MRDN+DKVLERD KLSELD RAD L   +  F   + +LK+KYWWQNLKM LIIG V V ++I    II+V  T G S   P    A +
Sbjct:    6 ETQGPRVSDKRLAQTQAKVDEVVGIMRDNIDKVLERDQKLSELDDRADALQVGAGQFQQQAGKLKRKYWWQNLKMMLIIGAVGVVLLI----IIIVWATSGSSGSAPAPAPATV 115
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|706138933|ref|XP_010202551.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Colius striatus])

HSP 1 Score: 110.923 bits (276), Expect = 3.325e-29
Identity = 53/89 (59.55%), Postives = 70/89 (78.65%), Query Frame = 0 
Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITII 96
            AS+ SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II
Sbjct:   20 ASNVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIII 108
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|677986847|ref|XP_009074514.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Acanthisitta chloris])

HSP 1 Score: 110.923 bits (276), Expect = 3.974e-29
Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0 
Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A+S +SN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II+
Sbjct:   20 ATSVASNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|768447963|ref|XP_011565989.1| (PREDICTED: synaptobrevin-1-like [Plutella xylostella])

HSP 1 Score: 110.923 bits (276), Expect = 4.993e-29
Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 0 
Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTSA 117
            S  RL +TQ +VD+V+ +MR NV+KVLERD KLSELD RAD L   +  F   + +LK+KYWWQN+KM LIIG   +  V+ II I+    +GGGS  P +T S+
Sbjct:   13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAEQFEQQAGKLKRKYWWQNMKMMLIIG--AIGAVLLIIIIVWAIPSGGGSSAPAVTPSS 115
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|768425763|ref|XP_011553898.1| (PREDICTED: synaptobrevin-1-like [Plutella xylostella])

HSP 1 Score: 110.538 bits (275), Expect = 6.077e-29
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 0 
Query:   13 SSNRLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIITIILVKTTGGGSDDPPLTTS 116
            S  RL +TQ +VD+V+ +MR NV+KVLERD KLSELD RAD L   +  F   + +LK+KYWWQN+KM LIIG   +  V+ II I+    +GGGS  P +T S
Sbjct:   13 SDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAEQFEQQAGKLKRKYWWQNMKMMLIIG--AIGAVLLIIIIVWAIPSGGGSSAPAVTPS 114
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|675629580|ref|XP_008943286.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Merops nubicus])

HSP 1 Score: 110.153 bits (274), Expect = 6.288e-29
Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0 
Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A++ SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II+
Sbjct:   20 ATNVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1215457491|gb|OXB58674.1| (hypothetical protein ASZ78_003641 [Callipepla squamata])

HSP 1 Score: 111.309 bits (277), Expect = 1.034e-28
Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 0 
Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A+S SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I IIT
Sbjct:   36 ATSVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCTVILIIIIT 125
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|701353456|ref|XP_009983779.1| (PREDICTED: vesicle-associated membrane protein 2-like, partial [Tauraco erythrolophus] >gi|701397022|ref|XP_009967941.1| PREDICTED: vesicle-associated membrane protein 2, partial [Tyto alba])

HSP 1 Score: 109.383 bits (272), Expect = 1.737e-28
Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 0 
Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A++ SSN RLQ+TQ  VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II+
Sbjct:   20 ATNVSSNKRLQQTQARVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|704317515|ref|XP_010167975.1| (PREDICTED: vesicle-associated membrane protein 2, partial [Antrostomus carolinensis])

HSP 1 Score: 108.997 bits (271), Expect = 1.895e-28
Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 0 
Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A++ SSN RLQ+TQ  VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I II+
Sbjct:   20 ATNVSSNKRLQQTQARVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCAVILIIIIS 109
[Close]
BLAST of vesicle-associated membrane protein partial vs. nr
Match: gi|1215490357|gb|OXB83522.1| (hypothetical protein H355_006369 [Colinus virginianus])

HSP 1 Score: 111.309 bits (277), Expect = 1.958e-28
Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 0 
Query:    9 ASSYSSN-RLQETQREVDDVLNVMRDNVDKVLERDGKLSELDTRADNLNSASSHFVTTSTRLKKKYWWQNLKMKLIIGGVVVAIVITIIT 97
            A+S SSN RLQ+TQ +VD+V+++MR NVDKVLERD KLSELD RAD L + +S F T++ +LK+KYWW+N KM +I+G V   I+I IIT
Sbjct:   36 ATSVSSNKRLQQTQAQVDEVVDIMRMNVDKVLERDQKLSELDNRADALQAGASQFETSAAKLKRKYWWKNCKMMIILGVVCTVILIIIIT 125
The following BLAST results are available for this feature:
BLAST of vesicle-associated membrane protein partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAG000000070951.271e-2641.32supercontig:LSalAtl2s:LSalAtl2s3:880430:881669:1 g... [more]
EMLSAG000000004071.644e-2348.84supercontig:LSalAtl2s:LSalAtl2s1064:131354:159067:... [more]
EMLSAG000000103931.348e-2149.30supercontig:LSalAtl2s:LSalAtl2s68:1408979:1409257:... [more]
EMLSAG000000095142.683e-1737.36supercontig:LSalAtl2s:LSalAtl2s612:212145:215065:1... [more]
EMLSAG000000095133.761e-1754.39supercontig:LSalAtl2s:LSalAtl2s612:211386:211874:1... [more]
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BLAST of vesicle-associated membrane protein partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|13124594|sp|Q9Z2J5.1|VAMP5_RAT1.304e-1441.03RecName: Full=Vesicle-associated membrane protein ... [more]
gi|1711414|sp|P33328.2|SNC2_YEAST2.792e-1435.53RecName: Full=Synaptobrevin homolog 2[more]
gi|55976764|sp|Q9BV40.1|VAMP8_HUMAN4.494e-1435.00RecName: Full=Vesicle-associated membrane protein ... [more]
gi|55976645|sp|O70404.1|VAMP8_MOUSE4.707e-1436.84RecName: Full=Vesicle-associated membrane protein ... [more]
gi|401107|sp|P31109.1|SNC1_YEAST1.506e-1339.44RecName: Full=Synaptobrevin homolog 1[more]

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BLAST of vesicle-associated membrane protein partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1344805246|ref|XP_023945273.1|7.095e-3050.88synaptobrevin-1-like [Bicyclus anynana][more]
gi|706138933|ref|XP_010202551.1|3.325e-2959.55PREDICTED: vesicle-associated membrane protein 2, ... [more]
gi|677986847|ref|XP_009074514.1|3.974e-2957.78PREDICTED: vesicle-associated membrane protein 2, ... [more]
gi|768447963|ref|XP_011565989.1|4.993e-2951.43PREDICTED: synaptobrevin-1-like [Plutella xylostel... [more]
gi|768425763|ref|XP_011553898.1|6.077e-2951.92PREDICTED: synaptobrevin-1-like [Plutella xylostel... [more]
gi|675629580|ref|XP_008943286.1|6.288e-2957.78PREDICTED: vesicle-associated membrane protein 2, ... [more]
gi|1215457491|gb|OXB58674.1|1.034e-2860.00hypothetical protein ASZ78_003641 [Callipepla squa... [more]
gi|701353456|ref|XP_009983779.1|1.737e-2857.78PREDICTED: vesicle-associated membrane protein 2-l... [more]
gi|704317515|ref|XP_010167975.1|1.895e-2857.78PREDICTED: vesicle-associated membrane protein 2, ... [more]
gi|1215490357|gb|OXB83522.1|1.958e-2860.00hypothetical protein H355_006369 [Colinus virginia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1588_size34843supercontigscaffold1588_size34843:6191..6915 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1588_size34843-snap-gene-0.12-mRNA-1maker-scaffold1588_size34843-snap-gene-0.12-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1588_size34843:6191..6915+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1588_size34843-snap-gene-0.12 ID=maker-scaffold1588_size34843-snap-gene-0.12|Name=vesicle-associated membrane protein partial|organism=Tigriopus kingsejongensis|type=gene|length=725bp|location=Sequence derived from alignment at scaffold1588_size34843:6191..6915+ (Tigriopus kingsejongensis)
CGCCCACTTGAGACTGTTCACCTAGCTGGGCGACCAAAGATAAGCCCCAC
TTCAGCTGTGTGTGTCTCCCCTAGTCCGTAAGAATTTGGCTCCGATAAGG
ACACACCAAAACACTTGGATTTCGTTCTCGAGACCATGGCTTCCAGCTAC
AGCTCCAACCGTCTCCAAGAGACTCAACGCGAGGTGGGTATGGGGCACAT
GGGTGGAATATATATACATGGGTCGATACAAGCTATGTCCGTGTGGTTTA
GGTAGATGACGTCTTGAACGTTATGCGTGACAATGTGGACAAGGTCCTGG
AGCGCGATGGGAAGCTCTCCGAGCTGGATACACGGGCGGACAACCTCAAC
TCGGCCTCTAGTCACTTTGTCACCACGTCCACGCGCTTGAAGAAGAAGTA
CTGGTGGCAAAACCTCAAGATGAAACTCATCATCGGAGGCGTGGTCGTGG
CCATCGTGATCACCATCATCACGATCATTCTGGTCAAGACCACCGGAGGC
GGGAGTGACGACCCTCCGCTGACCACTTCAGCACCCATCATTCCAGAATA
GGGGTAGAGCCGTATTCGCCCCGACTGTGCATCCTATTTAACCTATTGGA
CCTAAAAAAATACCGAAGCAGAAACTCCCGAGGCGATTTCCACCCGAGGC
AGCGGTCTACGGACCCGCCTCGGGAGTGGTCGACTCGGCGAATGCCCGTT
GTAATATGAAACTTTTGTCAACACA
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Synonyms
The feature 'vesicle-associated membrane protein partial' has the following synonyms
Synonym
Tk02929
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