wd repeat-containing and planar cell polarity effector protein fritz-like, maker-scaffold159_size295958-snap-gene-1.25 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. L. salmonis genes
Match: EMLSAG00000012146 (supercontig:LSalAtl2s:LSalAtl2s874:34686:36967:-1 gene:EMLSAG00000012146 transcript:EMLSAT00000012146 description:"maker-LSalAtl2s874-augustus-gene-0.32") HSP 1 Score: 79.7221 bits (195), Expect = 1.176e-18 Identity = 37/114 (32.46%), Postives = 67/114 (58.77%), Query Frame = 0 Query: 2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEF 115 A +R +L+NK+P KL+ G+R+ E +L EQ VVFS W+S L+Q++ + + +++ +NK G I++I DK+ VGK+ E + ++ +ES + + F + + F Sbjct: 18 ATXDERNTSWVLNNKKPFKLKSGIREMENLLSEQMVVFSKWRSPILYQMILSSSILINITINKEGGIDKINIDKSLVGKVMETLISADFNSRHLVAINVESNVAVVDFRKPLSF 131
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|327488181|sp|B1WC10.1|FRITZ_RAT (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz homolog; AltName: Full=WD repeat-containing and planar cell polarity effector protein) HSP 1 Score: 78.5666 bits (192), Expect = 1.139e-16 Identity = 42/139 (30.22%), Postives = 82/139 (58.99%), Query Frame = 0 Query: 7 RGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKL-QENMTDIILTKHVMIIAYL-ESKLTFIQFAR---NVEFSPEFEAFQHFEPKMTHHECLGPLGR 140 R + L N+RP KLR L++ E ++ + V W+S + Q++F +G+ V + L+ +E++ D++ VGKL + ++D +LT +I+++L ++KL FIQFA+ +++ + E + K+++H+ GP R Sbjct: 55 RDYPWTLKNRRPEKLRDSLKELEELMQNSQCVLCQWKSKHICQLLFGSGVLVSLSLSG-PQLEKVVIDRSLVGKLISDTISDALLTDSFIILSFLAQNKLCFIQFAKKMDSLDVNKRLEKLSALDYKISYHDIPGPATR 192
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|172047300|sp|O95876.2|FRITZ_HUMAN (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz homolog; Short=hFRTZ; AltName: Full=Bardet-Biedl syndrome 15 protein; AltName: Full=WD repeat-containing and planar cell polarity effector protein) HSP 1 Score: 75.8702 bits (185), Expect = 7.915e-16 Identity = 42/139 (30.22%), Postives = 81/139 (58.27%), Query Frame = 0 Query: 7 RGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKL-QENMTDIILTKHVMIIAYL-ESKLTFIQFARNVEFS---PEFEAFQHFEPKMTHHECLGPLGR 140 R + L N+RP KLR L++ E ++ + V S W++ + Q++F +G+ V + L+ +E++ D++ VGKL + ++D +LT +I+++L ++KL FIQF + +E S E + K+ ++E GP+ + Sbjct: 86 RDYPWTLKNRRPEKLRDSLKELEELMQNSRCVLSKWKNKYVCQLLFGSGVLVSLSLSG-PQLEKVVIDRSLVGKLISDTISDALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPGPINK 223
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|81876442|sp|Q8C456.1|FRITZ_MOUSE (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz homolog; Short=mFrtz; AltName: Full=Homolog-13; AltName: Full=WD repeat-containing and planar cell polarity effector protein) HSP 1 Score: 74.3294 bits (181), Expect = 2.800e-15 Identity = 41/139 (29.50%), Postives = 81/139 (58.27%), Query Frame = 0 Query: 7 RGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKL-QENMTDIILTKHVMIIAYL-ESKLTFIQFAR---NVEFSPEFEAFQHFEPKMTHHECLGPLGR 140 R + L N+RP KLR L++ E ++ V S W+S + Q++F +G+ V + L+ +E++ D++ VGKL + ++D +LT +I+++L ++KL FIQF + +++ + E + K+++++ GP R Sbjct: 55 RDYPWTLKNRRPEKLRDSLKELEELMQSSPCVLSKWKSKYICQLLFGSGVLVSLSLSG-PQLEKVVIDRSLVGKLISDTISDALLTDSFIILSFLAQNKLCFIQFTKKMDSLDGNKRLEKLSALDLKISYYDIPGPANR 192
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|123899001|sp|Q32NR9.1|FRITZ_XENLA (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz homolog; AltName: Full=WD repeat-containing and planar cell polarity effector protein) HSP 1 Score: 73.9442 bits (180), Expect = 3.627e-15 Identity = 45/144 (31.25%), Postives = 80/144 (55.56%), Query Frame = 0 Query: 3 FTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKLQEN-MTDIILTKHVMIIAYL-ESKLTFIQFARNVEFSPEFE----AFQHFEPKMTHHECLGPLGR 140 + RG +L NKRP KLR L + E ++ + V S W++ + Q++F +G+ V + L+ +E++ D++ VGKL N ++D I T +I+++L E+KL IQF + + SP+ + K+++ + GP GR Sbjct: 50 WMESRGFPWILKNKRPEKLRDNLTELEELMQSSECVLSKWKNKYVCQLLFGSGVLVSISLSG-PQLEKVVIDRSLVGKLISNPISDAIFTDSFIILSFLKENKLCLIQFTKKIN-SPDINRQLDKLSLLDLKISYTDIPGPKGR 191
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|75027305|sp|Q9VQ36.1|FRITZ_DROME (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz) HSP 1 Score: 65.0846 bits (157), Expect = 5.817e-12 Identity = 39/134 (29.10%), Postives = 71/134 (52.99%), Query Frame = 0 Query: 3 FTSDRGHILLLDN---KRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLN-KLGDIERIQFDKTFVGKL-QENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPEFEAFQHFEPKMTH 131 +T R + +L N K +L+ L+ E +L + +++ S WQ ++ ++F GL H+ ++ GDI R+ F+K VGKL E +TD T+ +++AY ++LT + R S E + +P++ H Sbjct: 50 YTERRNGLAVLKNSGRKSTGRLKDNLKKLEDLLRQHRIIHSEWQDAAQVLLLFSHGLIAHICVDIYTGDILRMVFEKYLVGKLASEVITDAFFTRSHIVLAYNTNQLTVVHLQRPNARSQGPEKIANMDPRIFH 183
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|925680420|gb|KOX77236.1| (WD repeat-containing and planar cell polarity effector protein fritz [Melipona quadrifasciata]) HSP 1 Score: 90.8929 bits (224), Expect = 1.681e-18 Identity = 43/140 (30.71%), Postives = 79/140 (56.43%), Query Frame = 0 Query: 2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLN-KLGDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPEFEAFQHFEPKMTHHECLGPLGR 140 ++ RG I + NK+ +KL+ ++ E L + +++ W + Q+M GL + + +N GDI +I FDK +GKL E+++D+I+TK+ + AY ++++T + F R+ F+ EPK++ + GP GR Sbjct: 44 SYCQKRGMIYVPTNKKGNKLKDSIKYLEEQLRDNTIIYCQWYDDCVLQLMLSNGLLIQIQVNITTGDISKITFDKYLIGKLLEHISDVIITKNYIFSAYNDNQVTIVHFTRSKRHV--FDKINKLEPKLSTIDLFGPNGR 181
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|645032890|ref|XP_008214857.1| (PREDICTED: WD repeat-containing and planar cell polarity effector protein fritz isoform X1 [Nasonia vitripennis]) HSP 1 Score: 86.6557 bits (213), Expect = 5.815e-17 Identity = 43/143 (30.07%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKL-GDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPE---FEAFQHFEPKMTHHECLGPLGR 140 ++ RG + + NK+ +K++ ++ E L + + W QIM +GL V++ +N GDI++I FDK VGKL + ++D+I+TK+ +I Y ++++T + F F P+ F+ +PK++ + GP GR Sbjct: 44 SYAQKRGMVYVPQNKKGNKMKDSVKYLEEQLNDHSTIHCQWTDYHTMQIMLSSGLLVYIQVNLCSGDIQKIVFDKYLVGKLPDRLSDVIITKNYLICTYNDTQVTLVSF-----FKPKRNIFDKISRLDPKLSTFDICGPSGR 181
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|1059871254|ref|XP_017790516.1| (PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing and planar cell polarity effector protein fritz [Habropoda laboriosa]) HSP 1 Score: 86.2705 bits (212), Expect = 7.492e-17 Identity = 41/140 (29.29%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLN-KLGDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPEFEAFQHFEPKMTHHECLGPLGR 140 ++ R I + NK+ +KL+ ++ E L + +++ W + Q+M L +H+ +N GD+ +I FDK VGKL E+++D+I+TK+ ++ Y ++++T + F R+ F+ EPK++ + GP GR Sbjct: 44 SYCQKRDMIYVPANKKGNKLKDCIKYLEEQLKDNSIIYCQWYDDCVLQLMLSNALLIHIQVNIATGDVSKITFDKYLVGKLLEHISDVIITKNCILCTYNDNQVTIVHFTRSKRHV--FDKINKLEPKLSTMDLFGPNGR 181
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|915662571|gb|KOC64993.1| (WD repeat-containing and planar cell polarity effector protein fritz [Habropoda laboriosa]) HSP 1 Score: 86.2705 bits (212), Expect = 7.562e-17 Identity = 41/140 (29.29%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLN-KLGDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPEFEAFQHFEPKMTHHECLGPLGR 140 ++ R I + NK+ +KL+ ++ E L + +++ W + Q+M L +H+ +N GD+ +I FDK VGKL E+++D+I+TK+ ++ Y ++++T + F R+ F+ EPK++ + GP GR Sbjct: 44 SYCQKRDMIYVPANKKGNKLKDCIKYLEEQLKDNSIIYCQWYDDCVLQLMLSNALLIHIQVNIATGDVSKITFDKYLVGKLLEHISDVIITKNCILCTYNDNQVTIVHFTRSKRHV--FDKINKLEPKLSTMDLFGPNGR 181
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|1227105530|gb|OXU28251.1| (hypothetical protein TSAR_001079 [Trichomalopsis sarcophagae]) HSP 1 Score: 85.8853 bits (211), Expect = 8.240e-17 Identity = 43/143 (30.07%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKL-GDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQF---ARNVEFSPEFEAFQHFEPKMTHHECLGPLGR 140 ++ RG + + NK+ +K++ ++ E L + + W QIM +GL V++ +N GDI++I FDK VGKL + ++D+I+TK+ +I Y ++++T + F RN+ F+ +PK++ + GP GR Sbjct: 44 SYAQKRGMVYVPQNKKGNKMKDSVKYLEEQLNDHSTIHCQWTDYHTMQIMLSSGLLVYIQVNLCSGDIQKIVFDKYLVGKLPDRLSDVIITKNYLICTYNDTQVTLVSFLKPKRNI-----FDKISRLDPKLSTFDICGPSGR 181 The following BLAST results are available for this feature:
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold159_size295958:105204..105692+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold159_size295958-snap-gene-1.25 ID=maker-scaffold159_size295958-snap-gene-1.25|Name=wd repeat-containing and planar cell polarity effector protein fritz-like|organism=Tigriopus kingsejongensis|type=gene|length=489bp|location=Sequence derived from alignment at scaffold159_size295958:105204..105692+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'wd repeat-containing and planar cell polarity effector protein fritz-like' has the following synonyms
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