wd repeat-containing and planar cell polarity effector protein fritz-like, maker-scaffold159_size295958-snap-gene-1.25 (gene) Tigriopus kingsejongensis

Overview
Namewd repeat-containing and planar cell polarity effector protein fritz-like
Unique Namemaker-scaffold159_size295958-snap-gene-1.25
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. L. salmonis genes
Match: EMLSAG00000012146 (supercontig:LSalAtl2s:LSalAtl2s874:34686:36967:-1 gene:EMLSAG00000012146 transcript:EMLSAT00000012146 description:"maker-LSalAtl2s874-augustus-gene-0.32")

HSP 1 Score: 79.7221 bits (195), Expect = 1.176e-18
Identity = 37/114 (32.46%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEF 115
            A   +R    +L+NK+P KL+ G+R+ E +L EQ VVFS W+S  L+Q++  + + +++ +NK G I++I  DK+ VGK+ E +         ++   +ES +  + F + + F
Sbjct:   18 ATXDERNTSWVLNNKKPFKLKSGIREMENLLSEQMVVFSKWRSPILYQMILSSSILINITINKEGGIDKINIDKSLVGKVMETLISADFNSRHLVAINVESNVAVVDFRKPLSF 131          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|327488181|sp|B1WC10.1|FRITZ_RAT (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz homolog; AltName: Full=WD repeat-containing and planar cell polarity effector protein)

HSP 1 Score: 78.5666 bits (192), Expect = 1.139e-16
Identity = 42/139 (30.22%), Postives = 82/139 (58.99%), Query Frame = 0
Query:    7 RGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKL-QENMTDIILTKHVMIIAYL-ESKLTFIQFAR---NVEFSPEFEAFQHFEPKMTHHECLGPLGR 140
            R +   L N+RP KLR  L++ E ++   + V   W+S  + Q++F +G+ V + L+    +E++  D++ VGKL  + ++D +LT   +I+++L ++KL FIQFA+   +++ +   E     + K+++H+  GP  R
Sbjct:   55 RDYPWTLKNRRPEKLRDSLKELEELMQNSQCVLCQWKSKHICQLLFGSGVLVSLSLSG-PQLEKVVIDRSLVGKLISDTISDALLTDSFIILSFLAQNKLCFIQFAKKMDSLDVNKRLEKLSALDYKISYHDIPGPATR 192          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|172047300|sp|O95876.2|FRITZ_HUMAN (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz homolog; Short=hFRTZ; AltName: Full=Bardet-Biedl syndrome 15 protein; AltName: Full=WD repeat-containing and planar cell polarity effector protein)

HSP 1 Score: 75.8702 bits (185), Expect = 7.915e-16
Identity = 42/139 (30.22%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    7 RGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKL-QENMTDIILTKHVMIIAYL-ESKLTFIQFARNVEFS---PEFEAFQHFEPKMTHHECLGPLGR 140
            R +   L N+RP KLR  L++ E ++   + V S W++  + Q++F +G+ V + L+    +E++  D++ VGKL  + ++D +LT   +I+++L ++KL FIQF + +E S      E     + K+ ++E  GP+ +
Sbjct:   86 RDYPWTLKNRRPEKLRDSLKELEELMQNSRCVLSKWKNKYVCQLLFGSGVLVSLSLSG-PQLEKVVIDRSLVGKLISDTISDALLTDSFIILSFLAQNKLCFIQFTKKMESSDVNKRLEKLSALDYKIFYYEIPGPINK 223          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|81876442|sp|Q8C456.1|FRITZ_MOUSE (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz homolog; Short=mFrtz; AltName: Full=Homolog-13; AltName: Full=WD repeat-containing and planar cell polarity effector protein)

HSP 1 Score: 74.3294 bits (181), Expect = 2.800e-15
Identity = 41/139 (29.50%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    7 RGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKL-QENMTDIILTKHVMIIAYL-ESKLTFIQFAR---NVEFSPEFEAFQHFEPKMTHHECLGPLGR 140
            R +   L N+RP KLR  L++ E ++     V S W+S  + Q++F +G+ V + L+    +E++  D++ VGKL  + ++D +LT   +I+++L ++KL FIQF +   +++ +   E     + K+++++  GP  R
Sbjct:   55 RDYPWTLKNRRPEKLRDSLKELEELMQSSPCVLSKWKSKYICQLLFGSGVLVSLSLSG-PQLEKVVIDRSLVGKLISDTISDALLTDSFIILSFLAQNKLCFIQFTKKMDSLDGNKRLEKLSALDLKISYYDIPGPANR 192          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|123899001|sp|Q32NR9.1|FRITZ_XENLA (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz homolog; AltName: Full=WD repeat-containing and planar cell polarity effector protein)

HSP 1 Score: 73.9442 bits (180), Expect = 3.627e-15
Identity = 45/144 (31.25%), Postives = 80/144 (55.56%), Query Frame = 0
Query:    3 FTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKLGDIERIQFDKTFVGKLQEN-MTDIILTKHVMIIAYL-ESKLTFIQFARNVEFSPEFE----AFQHFEPKMTHHECLGPLGR 140
            +   RG   +L NKRP KLR  L + E ++   + V S W++  + Q++F +G+ V + L+    +E++  D++ VGKL  N ++D I T   +I+++L E+KL  IQF + +  SP+           + K+++ +  GP GR
Sbjct:   50 WMESRGFPWILKNKRPEKLRDNLTELEELMQSSECVLSKWKNKYVCQLLFGSGVLVSISLSG-PQLEKVVIDRSLVGKLISNPISDAIFTDSFIILSFLKENKLCLIQFTKKIN-SPDINRQLDKLSLLDLKISYTDIPGPKGR 191          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Match: gi|75027305|sp|Q9VQ36.1|FRITZ_DROME (RecName: Full=WD repeat-containing and planar cell polarity effector protein fritz)

HSP 1 Score: 65.0846 bits (157), Expect = 5.817e-12
Identity = 39/134 (29.10%), Postives = 71/134 (52.99%), Query Frame = 0
Query:    3 FTSDRGHILLLDN---KRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLN-KLGDIERIQFDKTFVGKL-QENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPEFEAFQHFEPKMTH 131
            +T  R  + +L N   K   +L+  L+  E +L + +++ S WQ ++   ++F  GL  H+ ++   GDI R+ F+K  VGKL  E +TD   T+  +++AY  ++LT +   R    S   E   + +P++ H
Sbjct:   50 YTERRNGLAVLKNSGRKSTGRLKDNLKKLEDLLRQHRIIHSEWQDAAQVLLLFSHGLIAHICVDIYTGDILRMVFEKYLVGKLASEVITDAFFTRSHIVLAYNTNQLTVVHLQRPNARSQGPEKIANMDPRIFH 183          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|925680420|gb|KOX77236.1| (WD repeat-containing and planar cell polarity effector protein fritz [Melipona quadrifasciata])

HSP 1 Score: 90.8929 bits (224), Expect = 1.681e-18
Identity = 43/140 (30.71%), Postives = 79/140 (56.43%), Query Frame = 0
Query:    2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLN-KLGDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPEFEAFQHFEPKMTHHECLGPLGR 140
            ++   RG I +  NK+ +KL+  ++  E  L +  +++  W    + Q+M   GL + + +N   GDI +I FDK  +GKL E+++D+I+TK+ +  AY ++++T + F R+      F+     EPK++  +  GP GR
Sbjct:   44 SYCQKRGMIYVPTNKKGNKLKDSIKYLEEQLRDNTIIYCQWYDDCVLQLMLSNGLLIQIQVNITTGDISKITFDKYLIGKLLEHISDVIITKNYIFSAYNDNQVTIVHFTRSKRHV--FDKINKLEPKLSTIDLFGPNGR 181          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|645032890|ref|XP_008214857.1| (PREDICTED: WD repeat-containing and planar cell polarity effector protein fritz isoform X1 [Nasonia vitripennis])

HSP 1 Score: 86.6557 bits (213), Expect = 5.815e-17
Identity = 43/143 (30.07%), Postives = 79/143 (55.24%), Query Frame = 0
Query:    2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKL-GDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPE---FEAFQHFEPKMTHHECLGPLGR 140
            ++   RG + +  NK+ +K++  ++  E  L +   +   W      QIM  +GL V++ +N   GDI++I FDK  VGKL + ++D+I+TK+ +I  Y ++++T + F     F P+   F+     +PK++  +  GP GR
Sbjct:   44 SYAQKRGMVYVPQNKKGNKMKDSVKYLEEQLNDHSTIHCQWTDYHTMQIMLSSGLLVYIQVNLCSGDIQKIVFDKYLVGKLPDRLSDVIITKNYLICTYNDTQVTLVSF-----FKPKRNIFDKISRLDPKLSTFDICGPSGR 181          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|1059871254|ref|XP_017790516.1| (PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing and planar cell polarity effector protein fritz [Habropoda laboriosa])

HSP 1 Score: 86.2705 bits (212), Expect = 7.492e-17
Identity = 41/140 (29.29%), Postives = 78/140 (55.71%), Query Frame = 0
Query:    2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLN-KLGDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPEFEAFQHFEPKMTHHECLGPLGR 140
            ++   R  I +  NK+ +KL+  ++  E  L +  +++  W    + Q+M    L +H+ +N   GD+ +I FDK  VGKL E+++D+I+TK+ ++  Y ++++T + F R+      F+     EPK++  +  GP GR
Sbjct:   44 SYCQKRDMIYVPANKKGNKLKDCIKYLEEQLKDNSIIYCQWYDDCVLQLMLSNALLIHIQVNIATGDVSKITFDKYLVGKLLEHISDVIITKNCILCTYNDNQVTIVHFTRSKRHV--FDKINKLEPKLSTMDLFGPNGR 181          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|915662571|gb|KOC64993.1| (WD repeat-containing and planar cell polarity effector protein fritz [Habropoda laboriosa])

HSP 1 Score: 86.2705 bits (212), Expect = 7.562e-17
Identity = 41/140 (29.29%), Postives = 78/140 (55.71%), Query Frame = 0
Query:    2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLN-KLGDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQFARNVEFSPEFEAFQHFEPKMTHHECLGPLGR 140
            ++   R  I +  NK+ +KL+  ++  E  L +  +++  W    + Q+M    L +H+ +N   GD+ +I FDK  VGKL E+++D+I+TK+ ++  Y ++++T + F R+      F+     EPK++  +  GP GR
Sbjct:   44 SYCQKRDMIYVPANKKGNKLKDCIKYLEEQLKDNSIIYCQWYDDCVLQLMLSNALLIHIQVNIATGDVSKITFDKYLVGKLLEHISDVIITKNCILCTYNDNQVTIVHFTRSKRHV--FDKINKLEPKLSTMDLFGPNGR 181          
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Match: gi|1227105530|gb|OXU28251.1| (hypothetical protein TSAR_001079 [Trichomalopsis sarcophagae])

HSP 1 Score: 85.8853 bits (211), Expect = 8.240e-17
Identity = 43/143 (30.07%), Postives = 79/143 (55.24%), Query Frame = 0
Query:    2 AFTSDRGHILLLDNKRPHKLRQGLRDFELVLYEQKVVFSIWQSSSLFQIMFHTGLFVHVHLNKL-GDIERIQFDKTFVGKLQENMTDIILTKHVMIIAYLESKLTFIQF---ARNVEFSPEFEAFQHFEPKMTHHECLGPLGR 140
            ++   RG + +  NK+ +K++  ++  E  L +   +   W      QIM  +GL V++ +N   GDI++I FDK  VGKL + ++D+I+TK+ +I  Y ++++T + F    RN+     F+     +PK++  +  GP GR
Sbjct:   44 SYAQKRGMVYVPQNKKGNKMKDSVKYLEEQLNDHSTIHCQWTDYHTMQIMLSSGLLVYIQVNLCSGDIQKIVFDKYLVGKLPDRLSDVIITKNYLICTYNDTQVTLVSFLKPKRNI-----FDKISRLDPKLSTFDICGPSGR 181          
The following BLAST results are available for this feature:
BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000121461.176e-1832.46supercontig:LSalAtl2s:LSalAtl2s874:34686:36967:-1 ... [more]
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BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
gi|327488181|sp|B1WC10.1|FRITZ_RAT1.139e-1630.22RecName: Full=WD repeat-containing and planar cell... [more]
gi|172047300|sp|O95876.2|FRITZ_HUMAN7.915e-1630.22RecName: Full=WD repeat-containing and planar cell... [more]
gi|81876442|sp|Q8C456.1|FRITZ_MOUSE2.800e-1529.50RecName: Full=WD repeat-containing and planar cell... [more]
gi|123899001|sp|Q32NR9.1|FRITZ_XENLA3.627e-1531.25RecName: Full=WD repeat-containing and planar cell... [more]
gi|75027305|sp|Q9VQ36.1|FRITZ_DROME5.817e-1229.10RecName: Full=WD repeat-containing and planar cell... [more]
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BLAST of wd repeat-containing and planar cell polarity effector protein fritz-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|925680420|gb|KOX77236.1|1.681e-1830.71WD repeat-containing and planar cell polarity effe... [more]
gi|645032890|ref|XP_008214857.1|5.815e-1730.07PREDICTED: WD repeat-containing and planar cell po... [more]
gi|1059871254|ref|XP_017790516.1|7.492e-1729.29PREDICTED: LOW QUALITY PROTEIN: WD repeat-containi... [more]
gi|915662571|gb|KOC64993.1|7.562e-1729.29WD repeat-containing and planar cell polarity effe... [more]
gi|1227105530|gb|OXU28251.1|8.240e-1730.07hypothetical protein TSAR_001079 [Trichomalopsis s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold159_size295958supercontigscaffold159_size295958:105204..105692 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold159_size295958-snap-gene-1.25-mRNA-1maker-scaffold159_size295958-snap-gene-1.25-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold159_size295958:105204..105692+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold159_size295958-snap-gene-1.25 ID=maker-scaffold159_size295958-snap-gene-1.25|Name=wd repeat-containing and planar cell polarity effector protein fritz-like|organism=Tigriopus kingsejongensis|type=gene|length=489bp|location=Sequence derived from alignment at scaffold159_size295958:105204..105692+ (Tigriopus kingsejongensis)
GACAAAATGGCGTTCACCAGTGATCGAGGCCACATCCTCCTGCTCGATAA CAAGCGACCTCACAAACTTCGCCAAGGCCTCCGAGACTTTGAGCTTGTCC TCTATGAGCAGAAGGTTGTGTTTTCCATTTGGCAATCCTCGAGCCTGTTC CAAATTATGTTCCACACCGGTTTGTTTGTTCATGTTCACCTCAACAAATT GGGCGATATTGAGCGCATTCAATTTGACAAGGTTCGTAAACATGGGAATT GGTTTATATTTTGCGAAAATGAGTTAATAACTGATCAACTTCAGACCTTT GTGGGCAAACTCCAAGAGAATATGACAGACATCATCTTGACTAAGCATGT GATGATCATTGCTTACCTGGAATCCAAGCTCACCTTCATCCAATTCGCAA GAAATGTCGAATTTTCCCCCGAATTTGAGGCCTTCCAACATTTTGAGCCG AAAATGACCCACCACGAATGTCTCGGACCCTTAGGGCGA
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Synonyms
The feature 'wd repeat-containing and planar cell polarity effector protein fritz-like' has the following synonyms
Synonym
Tk05084
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