cuticle protein, maker-scaffold1672_size31643-snap-gene-0.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000001415 (supercontig:LSalAtl2s:LSalAtl2s1241:84693:85124:1 gene:EMLSAG00000001415 transcript:EMLSAT00000001415 description:"augustus-LSalAtl2s1241-processed-gene-0.12") HSP 1 Score: 122.865 bits (307), Expect = 1.976e-37 Identity = 73/126 (57.94%), Postives = 87/126 (69.05%), Query Frame = 0 Query: 3 TIFALLALAAVVLADN-PPPPYRPAPA----PYQPEPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGEAKYEPYQPKPAPKYPPPT 121 + ALLA+A AD P PY PAPA PY P P Y E+PA YQY YAV DEY+ L+F A+E R+GY+T+G Y V LPDGR QTV+Y+V + SGYVADV Y+GEAKYEPY P P+P P P Sbjct: 2 ALSALLAVAMSAPADTYRPAPYHPAPAYKPAPYHPAPSYKEDPAIYQYQYAVSDEYAGLNFGADEARDGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYEPYHPAPSPYKPAPV 127
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000009893 (supercontig:LSalAtl2s:LSalAtl2s643:512403:512841:-1 gene:EMLSAG00000009893 transcript:EMLSAT00000009893 description:"augustus-LSalAtl2s643-processed-gene-4.10") HSP 1 Score: 114.775 bits (286), Expect = 1.932e-34 Identity = 70/126 (55.56%), Postives = 85/126 (67.46%), Query Frame = 0 Query: 1 MKTIFALLALAAVVLADNPPPPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGEAKYEPYQPKPAPKYPPPTPQYN 125 MKT A+ AL A+ +AD+P P + + E PA YQY YAVKD+YS ++F A+E R+GYAT GSY V LPDGR QTVTYSV + SGYVADV Y+GE KY PY+P PAP PTP Y+ Sbjct: 1 MKTFIAVSALLALAIADHPAPYHPAPAPYHPAPSYNEVPAAYQYQYAVKDDYSGVNFGADEARDGYATKGSYTVALPDGRLQTVTYSVTDAYSGYVADVXYSGEPKYAPYKPAPAPY--KPTPVYH 124
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000001414 (supercontig:LSalAtl2s:LSalAtl2s1241:78790:79435:1 gene:EMLSAG00000001414 transcript:EMLSAT00000001414 description:"augustus-LSalAtl2s1241-processed-gene-0.11") HSP 1 Score: 112.464 bits (280), Expect = 3.818e-33 Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 0 Query: 27 PAPYQPEPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGEAKYEPYQPKPAPKYPPPT 121 PAPY P P Y E+PA YQY YAV DEY+ L+F A+E R+GY+T G Y V LPDGR QTV+Y+V + SGYVADV Y+GEAKYEP P P+P P P Sbjct: 42 PAPYHPAPSYKEDPAVYQYQYAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEAKYEPXHPAPSPYKPAPV 138
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000007669 (supercontig:LSalAtl2s:LSalAtl2s446:41257:76039:1 gene:EMLSAG00000007669 transcript:EMLSAT00000007669 description:"augustus-LSalAtl2s446-processed-gene-2.13") HSP 1 Score: 104.375 bits (259), Expect = 3.270e-28 Identity = 66/145 (45.52%), Postives = 83/145 (57.24%), Query Frame = 0 Query: 2 KTIFALLALAAVVLADNPP---------------------PPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGYVADVQYAGEAKYEPYQPKPAPKYPPPTPQYN 125 ++I A + LA V+AD+PP P Y+PAPA YQP E P Y Y YAV D+YS ++F+A E + SGSY V LPDGR QTV+Y+V+G SG+VADVQY G Y Y+PKP+ Y P P YN Sbjct: 76 RSILAYVFLATTVIADSPPLVSYAPSPSYKPAPAPSXQPAPSYKPAPA-YQPATYDESPKPYNYQYAVSDDYSGVNFSAEENSDAKVISGSYSVALPDGRIQTVSYTVDGYSGFVADVQYQGTPTYPKYEPKPSSSY-KPAPTYN 218
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000012059 (supercontig:LSalAtl2s:LSalAtl2s85:1250196:1251194:1 gene:EMLSAG00000012059 transcript:EMLSAT00000012059 description:"snap-LSalAtl2s85-processed-gene-11.56") HSP 1 Score: 99.3673 bits (246), Expect = 7.972e-28 Identity = 63/135 (46.67%), Postives = 80/135 (59.26%), Query Frame = 0 Query: 4 IFALLA---LAAVVLADNPPPPYRPAPAPYQP--------------EPKYEEPAQ-YQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGYVADVQYAGEAKYEPYQPKPAPKYPPP 120 +F LL L A V D+ P P+PAPY P PKYEEPAQ Y + Y V D+YS +F+A E +G T+GSY+V LPDGR QTV+Y+V+ +G+VADVQY G Y Y+PKP+P P P Sbjct: 1 MFKLLVASVLLASVYGDHSAP--HPSPAPYHPPQPAPYHAPAPSYHSPKYEEPAQPYAFQYGVADDYSGSNFSAEENADGKITTGSYKVALPDGRIQTVSYTVDAYNGFVADVQYEGTPVYPKYEPKPSPYKPAP 133
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000009892 (supercontig:LSalAtl2s:LSalAtl2s643:493611:494175:1 gene:EMLSAG00000009892 transcript:EMLSAT00000009892 description:"augustus-LSalAtl2s643-processed-gene-4.8") HSP 1 Score: 97.8265 bits (242), Expect = 9.374e-28 Identity = 57/104 (54.81%), Postives = 70/104 (67.31%), Query Frame = 0 Query: 1 MKTIFALLALAAVVLADNPPPPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGE 103 MKT A+ AL A+ +AD+P P + + E PA YQY YAVKD+YS ++F A+E R+GYAT GSY V LPDGR QTVTYSV + SGYVADV +GE Sbjct: 1 MKTFIAVSALLALAIADHPAPYHPAPAPYHPAPSYNEVPAAYQYQYAVKDDYSGVNFGADEARDGYATKGSYTVALPDGRLQTVTYSVTDAYSGYVADVXXSGE 104
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000004844 (supercontig:LSalAtl2s:LSalAtl2s2560:13440:35521:-1 gene:EMLSAG00000004844 transcript:EMLSAT00000004844 description:"augustus-LSalAtl2s2560-processed-gene-0.2") HSP 1 Score: 100.908 bits (250), Expect = 1.167e-27 Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 0 Query: 20 PPPYRPAP---APYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGEAKYEPYQP--KPAPKYPPPTP 122 P PY PAP +PY E Y+ PA YQY YAV D+Y+ +F NE R+GY+T+G Y+V LPDGRTQ V Y+V + SGYVADV+Y G+A Y+ Y+P K A +P P P Sbjct: 129 PTPYHPAPTHKSPYHAE-SYDTPAVYQYGYAVADDYAGTNFAQNENRDGYSTAGEYRVGLPDGRTQIVNYNVADAYSGYVADVKYEGQAHYDTYKPVHKHASYHPTPAP 236
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000003353 (supercontig:LSalAtl2s:LSalAtl2s1834:174757:175847:1 gene:EMLSAG00000003353 transcript:EMLSAT00000003353 description:"maker-LSalAtl2s1834-augustus-gene-0.3") HSP 1 Score: 94.7449 bits (234), Expect = 4.883e-25 Identity = 55/108 (50.93%), Postives = 69/108 (63.89%), Query Frame = 0 Query: 20 PPPYRPAPAPYQPEPKY------EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGEAKYEPYQPKPAPKYPPP 120 PP Y AP ++ P + + PA YQY YAV D+YS +F ANE R+GY+T G Y+V LPDGRTQ V Y+V + SG VADV+Y G A Y+ Y KPAP +P P Sbjct: 167 PPTYHSAPVVHKSSPYHAAESYADTPAVYQYGYAVADDYSGTNFAANENRDGYSTYGEYRVALPDGRTQVVNYNVADAYSGTVADVKYEGTAHYDTY--KPAPYHPAP 272
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000005113 (supercontig:LSalAtl2s:LSalAtl2s26:142964:143594:1 gene:EMLSAG00000005113 transcript:EMLSAT00000005113 description:"augustus-LSalAtl2s26-processed-gene-1.2") HSP 1 Score: 90.8929 bits (224), Expect = 5.424e-25 Identity = 53/110 (48.18%), Postives = 62/110 (56.36%), Query Frame = 0 Query: 1 MKTIFALLALAAVVLADNPPPPYRPAPAPYQPEPKYEEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGD--SGYVADVQYAGEAKYEP 108 MK + A AL A+ A Y P P YE+PA Y Y Y V D+YS +F +E R+GY TSG Y V LPDGR QTV Y V GD +GYVADV Y+G Y P Sbjct: 1 MKILLAFSALIALTSAQG-----------YHPTPSYEQPAHYAYNYGVVDDYSGNNFGQSESRDGYVTSGEYHVQLPDGRLQTVNYHV-GDAYTGYVADVTYSGTPSYGP 98
BLAST of cuticle protein vs. L. salmonis genes
Match: EMLSAG00000009004 (supercontig:LSalAtl2s:LSalAtl2s5650:4067:4550:1 gene:EMLSAG00000009004 transcript:EMLSAT00000009004 description:"snap-LSalAtl2s5650-processed-gene-0.3") HSP 1 Score: 90.1225 bits (222), Expect = 9.734e-25 Identity = 57/120 (47.50%), Postives = 69/120 (57.50%), Query Frame = 0 Query: 1 MKTIFALLALAAVVLADNPPPPYRPAPAPY------------QPEPKY-EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGEAKY 106 MK+ AL AL A+ AD+P P P P Y E+P YQY YAV DEY L+F A+E R+GY+T G V LPDGR QTV+Y+V + SGYVADV Y+GE KY Sbjct: 1 MKSFIALSALLAIAFADHPAPAPYHPAPAPYXPAPAYKPAPYHPAPSYKEDPTVYQYRYAVSDEYXGLNFEADEARDGYSTQGKXSVALPDGRIQTVSYNVADAYSGYVADVTYSGEPKY 120
BLAST of cuticle protein vs. SwissProt
Match: gi|75026432|sp|Q9V7U0.1|RESIL_DROME (RecName: Full=Pro-resilin; Flags: Precursor) HSP 1 Score: 58.151 bits (139), Expect = 8.930e-10 Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0 Query: 37 EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGYVADVQYAGEAK 105 +EPA+Y++ Y V+D S L F +E R+G T+G Y VLLPDGR Q V Y + GY ++Y G+A Sbjct: 340 DEPAKYEFNYQVEDAPSGLSFGHSEMRDGDFTTGQYNVLLPDGRKQIVEYEAD-QQGYRPQIRYEGDAN 407
BLAST of cuticle protein vs. nr
Match: gi|1022723484|gb|KZR97802.1| (Cuticular protein, partial [Daphnia magna]) HSP 1 Score: 87.4261 bits (215), Expect = 7.725e-20 Identity = 49/113 (43.36%), Postives = 73/113 (64.60%), Query Frame = 0 Query: 1 MKTIFALLALAAVVLADNPPPPYRPAPAPYQPEPKYEE--PAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGYVADVQYAGEAKYEPYQP 111 ++T+ ++LA V+ A P Y A + YE+ P + +A+AVKDE S+ D++ +E +G T+GSY+V+LPDGRTQ VTY + +GYVADV+Y GEA+Y Y+P Sbjct: 2 VQTVIIFVSLAGVLAAGQEQPQYERGAA----KSSYEQQAPMPHSFAWAVKDEPSKNDYSHQQESDGKVTTGSYRVVLPDGRTQIVTYKAD-QNGYVADVKYEGEARYPEYKP 109
BLAST of cuticle protein vs. nr
Match: gi|1325260635|ref|XP_023329778.1| (cuticle protein 7-like isoform X5 [Eurytemora affinis]) HSP 1 Score: 87.0409 bits (214), Expect = 3.073e-19 Identity = 56/104 (53.85%), Postives = 63/104 (60.58%), Query Frame = 0 Query: 17 DNPPP-PYRPAPAPYQPEPKYEEPA-QYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGEAKY----EPYQPKP 113 DN P Y PAPA P Y + A Y + Y V D+YS FN E R+GYATSGSY V LPDGR QTV Y V + SGYVADV Y+GEAKY PY+ P Sbjct: 16 DNAPRYGYAPAPAYGHAAPVYADEAPVYAFNYGVADDYSGATFNHGESRDGYATSGSYSVALPDGRIQTVNYKVADAYSGYVADVTYSGEAKYASAPAPYKAAP 119
BLAST of cuticle protein vs. nr
Match: gi|321460568|gb|EFX71609.1| (hypothetical protein DAPPUDRAFT_255533 [Daphnia pulex]) HSP 1 Score: 87.0409 bits (214), Expect = 3.571e-19 Identity = 62/129 (48.06%), Postives = 77/129 (59.69%), Query Frame = 0 Query: 1 MKTIFALLALAAVVLADNP--PPPYRPAPAPYQPEPKYEEPAQ-YQYAYAVKDEYSQLDFNANE--EREGYATSGSYQVLLPDGRTQTVTYSVNGDSGYVADVQYAGEAK----YEPYQPKPAPKYPPP 120 M+ +F L A +A N P P PAPA Y+ A Y +A+AVKD+Y+ D+ E + +GY SGSY+ LLPDGRTQTVTY + SGYVADV+Y GEAK Y+P KPAP YP P Sbjct: 1 MQVLFVLAAALIATVASNAYYPKPAYPAPAYPSYSKSYDYAAMPYSFAWAVKDDYTYNDYAHQETADDKGY-VSGSYRTLLPDGRTQTVTYKADDYSGYVADVKYDGEAKYPAEYKPSAYKPAPAYPSP 128
BLAST of cuticle protein vs. nr
Match: gi|1325276927|ref|XP_023323118.1| (cuticle protein 7-like [Eurytemora affinis]) HSP 1 Score: 87.8113 bits (216), Expect = 9.725e-19 Identity = 43/75 (57.33%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 37 EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSVNGDSGYVADVQYAGEAKYEPYQP 111 +E +Y + YAVKD+Y+ +F+A E+R+GY T+GSY+V LPDGRTQ VTY+ N D G+VADV+Y GEA Y Y+P Sbjct: 46 DEAPKYAFTYAVKDDYTYTNFDAAEQRDGYDTAGSYRVALPDGRTQIVTYTANKD-GFVADVKYEGEATYPEYKP 119
BLAST of cuticle protein vs. nr
Match: gi|1325260651|ref|XP_023329804.1| (cuticle protein 7-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 85.8853 bits (211), Expect = 1.134e-18 Identity = 48/82 (58.54%), Postives = 54/82 (65.85%), Query Frame = 0 Query: 37 EEPAQYQYAYAVKDEYSQLDFNANEEREGYATSGSYQVLLPDGRTQTVTYSV-NGDSGYVADVQYAGEAKYEPYQPKPAPKY 117 +E Y + Y V D+YS FN E R+GYATSGSY V LPDGR QTV Y V + SGYVADV Y+GEAKY P K AP Y Sbjct: 62 DEAPVYSFNYGVADDYSGATFNHGENRDGYATSGSYSVALPDGRIQTVNYKVADAYSGYVADVTYSGEAKYAPAPYKAAPVY 143 The following BLAST results are available for this feature:
BLAST of cuticle protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of cuticle protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of cuticle protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1672_size31643:27971..28482+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1672_size31643-snap-gene-0.9 ID=maker-scaffold1672_size31643-snap-gene-0.9|Name=cuticle protein|organism=Tigriopus kingsejongensis|type=gene|length=512bp|location=Sequence derived from alignment at scaffold1672_size31643:27971..28482+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cuticle protein' has the following synonyms
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