longitudinals lacking isoform g, maker-scaffold170_size291898-snap-gene-1.57 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000005406 (supercontig:LSalAtl2s:LSalAtl2s290:493651:518008:1 gene:EMLSAG00000005406 transcript:EMLSAT00000005406 description:"maker-LSalAtl2s290-augustus-gene-5.21") HSP 1 Score: 108.612 bits (270), Expect = 7.720e-26 Identity = 48/116 (41.38%), Postives = 82/116 (70.69%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTL-AAEGKHIQAHKMVLSACSDYFQSLFSA-TPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEK 159 Q+Y L+WN+++ + S F N+ + VDV+L A++G ++AH++VL+ACS YF+ + + QHP+++LKDV F DL+ IV+F+Y G V V D + ++K+A++L++KGL E+ Sbjct: 15 QQYCLKWNNYAASVTSTFKNILDGEDFVDVSLVASKGHALKAHRVVLAACSVYFREILKGLSLWQHPVIVLKDVPFTDLQGIVEFIYHGEVSVDQDALPSLLKSAEILKVKGLTEE 130
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000004798 (supercontig:LSalAtl2s:LSalAtl2s253:442774:444279:1 gene:EMLSAG00000004798 transcript:EMLSAT00000004798 description:"maker-LSalAtl2s253-snap-gene-4.4") HSP 1 Score: 107.842 bits (268), Expect = 6.152e-25 Identity = 42/117 (35.90%), Postives = 74/117 (63.25%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTE 162 + Y LQW H+T+++ F L+ D T+AAE + +AHK++LS CS YF+SLF T P+++LKD+ E + ++++MY G + V + ++ +++TA+ L+I+GL +E Sbjct: 6 EEYLLQWKSHNTEIIQEFHRLYKDDRFTDCTIAAEDETFRAHKLILSGCSPYFKSLFEKTSCSSPVIVLKDISAEHVGLLIRYMYLGVISVKREDLTTILRTANSLRIRGLTTDMSE 122
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000010910 (supercontig:LSalAtl2s:LSalAtl2s729:47426:53045:-1 gene:EMLSAG00000010910 transcript:EMLSAT00000010910 description:"maker-LSalAtl2s729-augustus-gene-0.17") HSP 1 Score: 109.383 bits (272), Expect = 9.391e-25 Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 0 Query: 48 YNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 + LQWND+ +++ F +L N V +TL+ EG+ I +HKM+LSACS YF+ L P HP++IL+ +EDL I+ F+Y G V + ++ IKTA L+I+GL Sbjct: 5 FTLQWNDYQNHLMNAFTSLRNDKDFVXLTLSCEGRKISSHKMLLSACSPYFRGLLKDNPCPHPVIILRQTSYEDLVAIIHFVYNGEVSLHQSRVKSFIKTAKSLKIRGL 113
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000002400 (supercontig:LSalAtl2s:LSalAtl2s145:1552795:1553691:1 gene:EMLSAG00000002400 transcript:EMLSAT00000002400 description:"augustus_masked-LSalAtl2s145-processed-gene-15.6") HSP 1 Score: 98.5969 bits (244), Expect = 6.589e-23 Identity = 42/116 (36.21%), Postives = 73/116 (62.93%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEK 159 S ++ L+WND + + + F+ L DVT+A+ G+ ++AHK++LSACS +F + P HP + L+D++ E L++++ FMY G V VS +++ + + A+ LQI GL +K Sbjct: 3 SHEQLCLKWNDFESSIKTGFSKLRKQKEFFDVTIASNGRFMKAHKVILSACSPFFHQIIKNIPHDHPFIYLRDIKAEHLESLLCFMYDGEVNVSQNELENFLSVAEELQIHGLSQK 118
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000001443 (supercontig:LSalAtl2s:LSalAtl2s1246:233521:243037:1 gene:EMLSAG00000001443 transcript:EMLSAT00000001443 description:"maker-LSalAtl2s1246-augustus-gene-1.25") HSP 1 Score: 102.834 bits (255), Expect = 6.857e-23 Identity = 45/118 (38.14%), Postives = 74/118 (62.71%), Query Frame = 0 Query: 42 GPSGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLA-AEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 G + Q+Y+L+WND + + S F +L + VDVTLA A+G ++AHK++LS+ S YF+ + TP +HPI+ILKD ++ +++F Y G V V+ + + + A +IKGL + Sbjct: 2 GTATQKYSLKWNDFTVNVASTFRDLHSRHDFVDVTLACADGSTLEAHKVILSSVSTYFRDILKTTPCKHPIIILKDXGRDEASAMLEFAYTGEVNVAQELLQSFLHMAKSFRIKGLDK 119
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000000726 (supercontig:LSalAtl2s:LSalAtl2s11160:124:477:-1 gene:EMLSAG00000000726 transcript:EMLSAT00000000726 description:"snap-LSalAtl2s11160-processed-gene-0.1") HSP 1 Score: 92.0485 bits (227), Expect = 1.884e-22 Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 0 Query: 50 LQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 L+WN+ + +VF L DVTLA K I+AHK++L A S +S+ + P HP++ L+ VQF L++++ FMY G V VS + + D + A+ LQI+GL Sbjct: 9 LRWNEFEANIKNVFTGLRKDEEFFDVTLACGPKQIKAHKIILCAFSPTLRSIIKSVPHSHPLLYLRSVQFHHLESLISFMYNGEVNVSQEDLEDFLSVAEELQIRGL 115
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000008480 (supercontig:LSalAtl2s:LSalAtl2s51:913154:914229:-1 gene:EMLSAG00000008480 transcript:EMLSAT00000008480 description:"maker-LSalAtl2s51-augustus-gene-9.13") HSP 1 Score: 97.8265 bits (242), Expect = 2.020e-22 Identity = 43/125 (34.40%), Postives = 79/125 (63.20%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL-GEKFTEAANKI 167 S + +L+W++ + + S F+ L N DVTLA KHI+AHK++LSACS +F+SL + P QHP++ L+ + F L++++ FMY G V + ++ + A L++ GL ++ ++++N++ Sbjct: 3 SSETLSLRWDEFESNIKSGFSQLRNDEDFFDVTLACGSKHIKAHKVILSACSSFFRSLIKSIPHQHPLLYLRGIDFNHLESVLCFMYNGEVRIKPHELDQFLSVAQELKVNGLVQDRSSQSSNEV 127
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000008770 (supercontig:LSalAtl2s:LSalAtl2s543:274592:275849:1 gene:EMLSAG00000008770 transcript:EMLSAT00000008770 description:"augustus-LSalAtl2s543-processed-gene-1.2") HSP 1 Score: 96.6709 bits (239), Expect = 3.185e-22 Identity = 45/114 (39.47%), Postives = 74/114 (64.91%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ-HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 S +R L+WN++ + F++L + L DVTL + K I+AHK++LSACS F+S+ ++ P Q HP++ L+ + F+ L+ ++ FMY G V+V +++ D I A+ QIKGL Sbjct: 3 SLERLCLRWNEYESNFKQGFSDLRENEELFDVTLISGSKIIKAHKVILSACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEELDDFISIAEEFQIKGL 116
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000006263 (supercontig:LSalAtl2s:LSalAtl2s340:960:2497:-1 gene:EMLSAG00000006263 transcript:EMLSAT00000006263 description:"snap_masked-LSalAtl2s340-processed-gene-0.12") HSP 1 Score: 96.6709 bits (239), Expect = 3.467e-22 Identity = 40/101 (39.60%), Postives = 68/101 (67.33%), Query Frame = 0 Query: 45 GQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAE-GKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDV 144 Q+++L+WN+HS ++ F +L ++ +LVDV+L GK + AH+MVL+ACS+YF LF P +HP+++ KD + ++ ++ FMY+G VEV +S + Sbjct: 3 AQQFHLKWNNHSLNTLNSFQHLLDTHTLVDVSLTCNNGKTLSAHRMVLAACSEYFYRLFKDLPEKHPVIVFKDASEDIVRDLLLFMYKGEVEVREAILSSL 103
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000003189 (supercontig:LSalAtl2s:LSalAtl2s176:671224:672666:1 gene:EMLSAG00000003189 transcript:EMLSAT00000003189 description:"augustus-LSalAtl2s176-processed-gene-6.4") HSP 1 Score: 97.0561 bits (240), Expect = 3.785e-22 Identity = 57/185 (30.81%), Postives = 102/185 (55.14%), Query Frame = 0 Query: 50 LQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ-HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSRRLLSVPSQHSVNSRQYSTES--------LPEYFNRTSSFSPRQASTDSARQLSFESSVSP 225 ++WN++ + + + L ++ L DVTL + + I+AHK++LSACS F+S+ + HP++ LKD+ F+ L+ I+ F+Y G + V+SD+I+D++ AD+ QIKGL +A I G + S +S ++ + +S + F SS + ++ + D + S ESS +P Sbjct: 9 IKWNEYESNLKEGLSELLHNEELFDVTLISGSRVIKAHKVILSACSPVFRSIIQSVSFHPHPVIYLKDINFDHLELILSFLYYGEMRVASDEINDLLCVADVFQIKGLYNNTITSAT--INGEDIFIQSNSDLYSSINKSFQHQSCNTNPNKECQDIFAPNSSLNTKRENPDESFLYSLESSYNP 191
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|29428068|sp|Q9W0K7.2|BAB1_DROME (RecName: Full=Protein bric-a-brac 1) HSP 1 Score: 146.362 bits (368), Expect = 6.952e-35 Identity = 72/173 (41.62%), Postives = 107/173 (61.85%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE--KFTEAANKIIEGSSRRLLSVPSQHSVNS-----RQYSTESL-----PEYFNRTSSFSP 206 Q++ L+WN++ T + ++F L + VDVTLA +G+ ++AHKMVLSACS YFQ+L + TP QHPIVI++DV + DLK IV+FMY+G + VS D+I +++ A+ML+++GL + A SS R+ S P + + S R+ E L PE RTS + P Sbjct: 100 QQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSERMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDWDP 272
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|29428067|sp|Q9W0K4.2|BAB2_DROME (RecName: Full=Protein bric-a-brac 2) HSP 1 Score: 141.739 bits (356), Expect = 1.883e-33 Identity = 59/114 (51.75%), Postives = 85/114 (74.56%), Query Frame = 0 Query: 45 GQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 GQ++ L+WN++ + + +VF L S S VDVTL+ EG I+AHKMVLSACS YFQ+LF P QHPI+I++DV + DLK +V+FMY+G + V D+I+ ++K A+ L+I+GL E Sbjct: 195 GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAE 308
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|20455517|sp|P17789.2|TTKB_DROME (RecName: Full=Protein tramtrack, beta isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p69) HSP 1 Score: 138.272 bits (347), Expect = 8.482e-33 Identity = 57/113 (50.44%), Postives = 86/113 (76.11%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 QR+ L+WN+H + ++SVF L ++ + DVTLA EG+H++AHKMVLSACS YF +LF + P +HPIVILKDV + D+K+++ FMY+G V V ++++ ++ A+ L+IKGL E Sbjct: 6 QRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE 118
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|47117851|sp|P42282.3|TTKA_DROME (RecName: Full=Protein tramtrack, alpha isoform; AltName: Full=Repressor protein fushi tarazu; AltName: Full=Tramtrack p88) HSP 1 Score: 138.658 bits (348), Expect = 1.405e-32 Identity = 57/115 (49.57%), Postives = 87/115 (75.65%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 + QR+ L+WN+H + ++SVF L ++ + DVTLA EG+H++AHKMVLSACS YF +LF + P +HPIVILKDV + D+K+++ FMY+G V V ++++ ++ A+ L+IKGL E Sbjct: 4 ASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTE 118
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73621174|sp|Q7KRI2.1|LOLAL_DROME (RecName: Full=Longitudinals lacking protein-like; Short=Lola-like protein; AltName: Full=Protein Batman) HSP 1 Score: 125.176 bits (313), Expect = 1.794e-32 Identity = 59/115 (51.30%), Postives = 82/115 (71.30%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 S Q++ L+WND T MV+ F +L + S DVTLA EG+ +AHKMVLSACS YF++L P++HPI+ILKDV + L+ I++FMY G V VS +++ +KTAD L++KGL E Sbjct: 4 SDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKALLEENPSKHPIIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAE 118
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME (RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L) HSP 1 Score: 131.724 bits (330), Expect = 1.808e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|317373382|sp|P42283.2|LOLA1_DROME (RecName: Full=Longitudinals lacking protein, isoform G) HSP 1 Score: 132.109 bits (331), Expect = 2.100e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920873|sp|Q9V5M6.4|LOLA5_DROME (RecName: Full=Longitudinals lacking protein, isoforms J/P/Q/S/Z) HSP 1 Score: 131.339 bits (329), Expect = 4.104e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920872|sp|Q867Z4.1|LOLA4_DROME (RecName: Full=Longitudinals lacking protein, isoforms F/I/K/T) HSP 1 Score: 130.954 bits (328), Expect = 4.286e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920225|sp|P42284.2|LOLA2_DROME (RecName: Full=Longitudinals lacking protein, isoforms H/M/V) HSP 1 Score: 129.028 bits (323), Expect = 4.387e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|915665116|gb|KOC67164.1| (Longitudinals lacking protein, isoform G [Habropoda laboriosa]) HSP 1 Score: 168.318 bits (425), Expect = 3.857e-41 Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V +S D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|815900384|ref|XP_012236343.1| (longitudinals lacking protein, isoforms H/M/V isoform X3 [Bombus impatiens]) HSP 1 Score: 168.318 bits (425), Expect = 3.932e-41 Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V +S D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|808118003|ref|XP_012176339.1| (longitudinals lacking protein, isoforms H/M/V isoform X3 [Bombus terrestris]) HSP 1 Score: 168.318 bits (425), Expect = 3.970e-41 Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V +S D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|817058761|ref|XP_012250859.1| (BTB/POZ domain-containing protein 18 isoform X2 [Athalia rosae]) HSP 1 Score: 168.318 bits (425), Expect = 4.548e-41 Identity = 77/129 (59.69%), Postives = 97/129 (75.19%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHP+VILKDV F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGQHLQAHKVVLSACSTYFQSLFTVNPCQHPVVILKDVMFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSS 130 HSP 2 Score: 107.457 bits (267), Expect = 1.067e-20 Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETS 743 GH P R GPALGCNHCWN+ D +GRILRRKTKY C EC NLCIVPCFQ++HE R RE S Sbjct: 452 LGHCPVQRPGPALGCNHCWNTIDAHGRILRRKTKYHCPECQTNLCIVPCFQEFHE-RQREVS 512
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|307204530|gb|EFN83210.1| (Longitudinals lacking protein, isoform G [Harpegnathos saltator]) HSP 1 Score: 167.933 bits (424), Expect = 5.610e-41 Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKD++F DLK +V FMY G V +S D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDIKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSE 131 The following BLAST results are available for this feature:
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of longitudinals lacking isoform g vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of longitudinals lacking isoform g vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold170_size291898:168722..175248- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold170_size291898-snap-gene-1.57 ID=maker-scaffold170_size291898-snap-gene-1.57|Name=longitudinals lacking isoform g|organism=Tigriopus kingsejongensis|type=gene|length=6527bp|location=Sequence derived from alignment at scaffold170_size291898:168722..175248- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'longitudinals lacking isoform g' has the following synonyms
Add to Basket
|