longitudinals lacking isoform g, maker-scaffold170_size291898-snap-gene-1.57 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000007352 (supercontig:LSalAtl2s:LSalAtl2s416:6420:9389:1 gene:EMLSAG00000007352 transcript:EMLSAT00000007352 description:"augustus_masked-LSalAtl2s416-processed-gene-0.4") HSP 1 Score: 96.6709 bits (239), Expect = 4.263e-22 Identity = 41/107 (38.32%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 50 LQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 L+WN+ + + F+ L N DVTLA KHI+AHK++LSACS +F+SL + P QHP++ L+ + F L++++ FMY G V + ++ + A L++ GL Sbjct: 9 LRWNEFESNIKFGFSQLRNDEDFFDVTLACGSKHIKAHKVILSACSSFFRSLIKSIPHQHPLLYLRGIDFNHLESVLCFMYNGEVRIKPHELDQFLSIAQELKVNGL 115
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000003813 (supercontig:LSalAtl2s:LSalAtl2s206:356922:359066:1 gene:EMLSAG00000003813 transcript:EMLSAT00000003813 description:"augustus_masked-LSalAtl2s206-processed-gene-3.1") HSP 1 Score: 98.5969 bits (244), Expect = 4.811e-22 Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 0 Query: 50 LQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 L+W+DH S+ + L + L+DVTL AHK++LS CS YF+SLF P HP+V+LKDV+ + L+ + +MY+G V S ++S ++ TA LQI+GL E Sbjct: 9 LKWDDHHKSFFSLASELXDREELIDVTLITGDSSFPAHKLILSICSPYFRSLFVRNPCSHPMVVLKDVEAKYLRLXLIYMYEGQVACPSAELSGLLATAKSLQIRGLLE 117
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000001228 (supercontig:LSalAtl2s:LSalAtl2s11:428586:431606:1 gene:EMLSAG00000001228 transcript:EMLSAT00000001228 description:"maker-LSalAtl2s11-augustus-gene-4.13") HSP 1 Score: 94.3597 bits (233), Expect = 2.966e-21 Identity = 39/107 (36.45%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 50 LQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 L+WN+ + + F+ L + DVTLA + I+AHK++LS CS +F+SL + P +HP++ L+ V F L++++ FMY G V V +++D + A L++ GL Sbjct: 9 LRWNEFESNIKQGFSQLRDDEDFFDVTLACGSRQIKAHKVILSTCSSFFRSLIKSVPHEHPLLYLRGVDFNHLESVLSFMYNGEVRVEQKELNDFLSVAQELRVNGL 115
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000010530 (supercontig:LSalAtl2s:LSalAtl2s69:565:4142:-1 gene:EMLSAG00000010530 transcript:EMLSAT00000010530 description:"snap-LSalAtl2s69-processed-gene-0.8") HSP 1 Score: 97.0561 bits (240), Expect = 3.507e-21 Identity = 45/114 (39.47%), Postives = 74/114 (64.91%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ-HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 S +R L+WN++ + F++L + L DVTL + K I+AHK++LSACS F+S+ ++ P Q HP++ L+ + F+ L+ ++ FMY G V+V +++ D I A+ QIKGL Sbjct: 3 SLERLCLRWNEYESNFKQGFSDLRQNEELFDVTLISGSKIIKAHKVILSACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEELDDFISIAEEFQIKGL 116 HSP 2 Score: 86.6557 bits (213), Expect = 5.808e-18 Identity = 41/103 (39.81%), Postives = 67/103 (65.05%), Query Frame = 0 Query: 55 HSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ-HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 H ++ F++L + L DVTL + K I+AHK++LSACS F+S+ ++ P Q HP++ L+ + F+ L+ ++ FMY G V+V +++ D I A+ QIKGL Sbjct: 279 HENRVHKRFSDLRENEELFDVTLISGSKIIKAHKVILSACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEELEDFISIAEEFQIKGL 381
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Match: EMLSAG00000008772 (supercontig:LSalAtl2s:LSalAtl2s543:279105:281214:-1 gene:EMLSAG00000008772 transcript:EMLSAT00000008772 description:"augustus-LSalAtl2s543-processed-gene-1.15") HSP 1 Score: 94.7449 bits (234), Expect = 4.184e-21 Identity = 43/108 (39.81%), Postives = 71/108 (65.74%), Query Frame = 0 Query: 50 LQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ-HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 L+WN++ + F++L + L DVTL + K I+AHK++LSACS F+S+ ++ P Q HP++ L+ + F+ L+ ++ FMY G V+V +++ D I A+ QIKGL Sbjct: 9 LRWNEYESNFKQGFSDLRENEELFDVTLISGSKIIKAHKVILSACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEELEDFISIAEEFQIKGL 116 HSP 2 Score: 68.1662 bits (165), Expect = 2.525e-12 Identity = 30/74 (40.54%), Postives = 51/74 (68.92%), Query Frame = 0 Query: 84 IQAHKMVLSACSDYFQSLFSATPTQ-HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 I+AHK++LSACS F+S+ ++ P HP++ L+ + F+ L+ ++ FM G V+V +++ D I A+ LQIKG+ Sbjct: 250 IKAHKVILSACSPIFRSIIASAPIHTHPLIYLRGINFDHLELLLSFMDHGEVKVIQEELEDFISIAEELQIKGI 323
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73920874|sp|Q9V5M3.3|LOLA6_DROME (RecName: Full=Longitudinals lacking protein, isoforms N/O/W/X/Y) HSP 1 Score: 130.183 bits (326), Expect = 7.407e-30 Identity = 55/116 (47.41%), Postives = 86/116 (74.14%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFT 161 Q++ L+WN+H + ++SVF L + +LVD TLAAEGK ++AHK+VLSACS YF +L +HPI ILKDV++++L+ ++ +MY+G V +S D+++ ++K A+ LQIKGL + T Sbjct: 5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT 120
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|13123979|sp|Q24206.2|BRC4_DROME (RecName: Full=Broad-complex core protein isoform 6) HSP 1 Score: 125.561 bits (314), Expect = 2.169e-28 Identity = 51/117 (43.59%), Postives = 81/117 (69.23%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTE 162 Q + L+WN++ + + S F NL + + VDVTLA EG+ I+AH++VLSACS YF+ L +TP +HP+++L+DV F DL +V+F+Y G V V + +KTA++L++ GL ++ E Sbjct: 5 QHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAE 121
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|13124701|sp|Q01295.2|BRC1_DROME (RecName: Full=Broad-complex core protein isoforms 1/2/3/4/5) HSP 1 Score: 124.79 bits (312), Expect = 2.731e-28 Identity = 51/117 (43.59%), Postives = 81/117 (69.23%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTE 162 Q + L+WN++ + + S F NL + + VDVTLA EG+ I+AH++VLSACS YF+ L +TP +HP+++L+DV F DL +V+F+Y G V V + +KTA++L++ GL ++ E Sbjct: 5 QHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAE 121
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|27923726|sp|Q24174.2|ABRU_DROME (RecName: Full=Protein abrupt; AltName: Full=Protein clueless) HSP 1 Score: 124.405 bits (311), Expect = 5.575e-28 Identity = 53/111 (47.75%), Postives = 78/111 (70.27%), Query Frame = 0 Query: 48 YNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Y L+WND + ++S F +L + VDVTLA + + AHK+VLSACS YF+ L A P +HPIVIL+DV+ +D++ ++ FMY G V VS +++ D +KTA +LQI+GL + Sbjct: 78 YALKWNDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYFRRLLKANPCEHPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLAD 188
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|33112291|sp|Q8IN81.1|FRU_DROME (RecName: Full=Sex determination protein fruitless) HSP 1 Score: 115.161 bits (287), Expect = 4.366e-25 Identity = 47/118 (39.83%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 42 GPSGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEK 159 G Q++ L+WN+H T + V +L +L DVTLA EG+ ++AH+ +LSACS YF+++F HPI+ LKDV++ ++++++ FMY+G V V + +KTA+ LQ++GL + Sbjct: 100 GAMDQQFCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSPYFETIFLQNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTDN 217
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|73621294|sp|P14083.2|LOV_DROME (RecName: Full=Protein jim lovell; AltName: Full=Protein TKR; AltName: Full=Tyrosine kinase-related; Short=dTKR) HSP 1 Score: 115.161 bits (287), Expect = 4.773e-25 Identity = 47/111 (42.34%), Postives = 74/111 (66.67%), Query Frame = 0 Query: 48 YNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Y+L+WN+H ++ F L + +LVDVTL I+AHKMVLSACS +FQ +F+ TP +HP+++LKD + ++ IV FMY+G + V ++ +I+ + LQ++GL E Sbjct: 115 YSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVE 225
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|75027304|sp|Q9VQ30.3|CHNMO_DROME (RecName: Full=Zinc finger protein chinmo; AltName: Full=Protein chronologically inappropriate morphogenesis) HSP 1 Score: 101.679 bits (252), Expect = 3.742e-21 Identity = 44/112 (39.29%), Postives = 73/112 (65.18%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ-HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 Q++ L+WN S+ + F+NLF S L DV L+ +G +AHK++L+ACS F LF TPT ++IL+ +++ +++FMY+G V VS + ++ +K+A+ LQ+KGL Sbjct: 5 QQFCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTPTNGQCVIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGL 116
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|46396378|sp|Q86B87.1|MMD4_DROME (RecName: Full=Modifier of mdg4) HSP 1 Score: 98.9821 bits (245), Expect = 2.686e-20 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ-HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGL 156 ++++L WN+ +T + + F LVDV+LAAEG+ ++AH++VLS CS +F+ +F+ P+ H IV L +V LK ++QFMY G V V D + I TA+ LQIKGL Sbjct: 5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTHAIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGL 116
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|83287912|sp|Q08605.2|GAGA_DROME (RecName: Full=Transcription factor GAGA; AltName: Full=Adh transcription factor 2; AltName: Full=GAGA factor; Short=GAF; AltName: Full=Neural conserved at 70F; AltName: Full=Trithorax-like protein) HSP 1 Score: 89.3521 bits (220), Expect = 2.945e-17 Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 0 Query: 43 PSGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLG 157 P Y+L W D+ T +VS L LVD TLAA G+ AHK+VL A S + L TP +HP+V+L V DL+ +++F+Y+G V V ++ +++ A L I+GL Sbjct: 4 PMNSLYSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCKHPVVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLA 118
BLAST of longitudinals lacking isoform g vs. SwissProt
Match: gi|47115846|sp|Q8R179.1|KBTB4_MOUSE (RecName: Full=Kelch repeat and BTB domain-containing protein 4; AltName: Full=BTB and kelch domain-containing protein 4) HSP 1 Score: 71.633 bits (174), Expect = 1.076e-11 Identity = 31/115 (26.96%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 72 LVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQ--HPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIE-GSSRRLLSVPSQHS 183 DVT++ EG+ Q H++VLSA S +F+S+F++ + + +++L+DV + +V ++Y G+V++ +D++ ++ + +DM Q+ L E+ + + ++ G+ +++ + +HS Sbjct: 60 FADVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRADELQEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHS 174
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1325306524|ref|XP_023334874.1| (serine/arginine repetitive matrix protein 1-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 224.557 bits (571), Expect = 1.124e-60 Identity = 197/505 (39.01%), Postives = 261/505 (51.68%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSRRLLSVPSQHSVNSRQYSTESLPEYFNRTSS---FSPRQASTDSARQLSFESSVSPLVR--KHPTPPSSPPRHL-------RKKFRRLSGCGSSSDRGNSLEDDRSPAHPAQRTTSPPAIHLSPSRQSSSSTDPEANLAVGNHAKKKRELFSARSSRSGGSNKSSVSDYSRDQSFKQLESSGSSGQSHSISQSQEEALTTSSSLNVQTTSSLTVPGS-GRTLVRAQSAGDATSSLVHSDSKRSRFLLKRQDCIEKGIDLTTDTSTENESAAAQPTVKSSP-----------NSPLMGHSYPKAVSPMDVKSEPPLHLSAPSGPPLA--SGPPSTFAKQKPGPRLLSPPKSNMHPISPYAESCPPHLVPPPPPMSHKLP 524 Q ++L+WN+H +VSVF L+ + SLVDV+LAAEG+H+QAHK+VLSACSDYFQ+LF+A P QHPIVILKDV FEDL+ +V+FMY G V VSSDK+ V+KTAD LQIKGL EK E + + G+S RLL VP+ H RQ STESLPEY +R+ S F P +A + +R SF+S + R + +PP SP ++ RKKFR S S+S +DR SPS S S T+ + AKKKR +F ++ S GS S + + S +S K+ + GS S SIS S + L + +L VPG+ RTLVRA S S+ R R +LKRQ C E + T E ++ + TV + P +P +SP V P PS PL P ++ PGPRL PP + + P P ++P P PM LP Sbjct: 7 QYFSLRWNNHPVNLVSVFTGLYQAESLVDVSLAAEGRHLQAHKVVLSACSDYFQALFAANPCQHPIVILKDVSFEDLQIVVKFMYHGIVNVSSDKLPGVLKTADALQIKGL-EKNNEMLSPFL-GTS-RLLPVPTHH---GRQPSTESLPEYLHRSRSEGGFFPHRAHSAESRGYSFDSGPLEISRHKRLLSPPGSPAHNIPPGTSLARKKFRNRSEHESTST------EDRG----EGEVKEEVKEDKSPSLYSGSDTE--------HIAKKKRAMFQSQKCSSSGSRSSELHNSSEGRSDKENKRQGSLSSSQSISHSSDR-----EELEIHQKDTLQVPGAHCRTLVRAAST---------SELNRGR-ILKRQQCQESNEEGEGVTKIEPPTSPPRITVNTPPVKRPKSFSPSPIPSPPPEEHP--ISPAPVSPHPETS-RQPSIDPLCGLESVPLLYSSSGPGPRL--PPSNLLRPHLPSVR-----VIPEPEPMHELLP 462 HSP 2 Score: 117.087 bits (292), Expect = 1.481e-23 Identity = 51/78 (65.38%), Postives = 55/78 (70.51%), Query Frame = 0 Query: 668 LSLSSSLTTSIQPDFGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETSQN 745 LS SS FGH PK RDGPAL CN CWN+TDG+GRILRRKTKY C EC NLCIVPCFQQ+HEA + E N Sbjct: 506 LSSSSGRPVGSMEQFGHCPKARDGPALSCNFCWNTTDGSGRILRRKTKYHCPECQTNLCIVPCFQQFHEALESEPQNN 583
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1325306518|ref|XP_023334873.1| (serine/arginine repetitive matrix protein 1-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 223.787 bits (569), Expect = 2.399e-60 Identity = 197/506 (38.93%), Postives = 261/506 (51.58%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSRRLLSVPSQHSVNSRQYSTESLPEYFNRTSS---FSPRQASTDSARQLSFESSVSPLVR--KHPTPPSSPPRHL--------RKKFRRLSGCGSSSDRGNSLEDDRSPAHPAQRTTSPPAIHLSPSRQSSSSTDPEANLAVGNHAKKKRELFSARSSRSGGSNKSSVSDYSRDQSFKQLESSGSSGQSHSISQSQEEALTTSSSLNVQTTSSLTVPGS-GRTLVRAQSAGDATSSLVHSDSKRSRFLLKRQDCIEKGIDLTTDTSTENESAAAQPTVKSSP-----------NSPLMGHSYPKAVSPMDVKSEPPLHLSAPSGPPLA--SGPPSTFAKQKPGPRLLSPPKSNMHPISPYAESCPPHLVPPPPPMSHKLP 524 Q ++L+WN+H +VSVF L+ + SLVDV+LAAEG+H+QAHK+VLSACSDYFQ+LF+A P QHPIVILKDV FEDL+ +V+FMY G V VSSDK+ V+KTAD LQIKGL EK E + + G+S RLL VP+ H RQ STESLPEY +R+ S F P +A + +R SF+S + R + +PP SP ++ RKKFR S S+S +DR SPS S S T+ + AKKKR +F ++ S GS S + + S +S K+ + GS S SIS S + L + +L VPG+ RTLVRA S S+ R R +LKRQ C E + T E ++ + TV + P +P +SP V P PS PL P ++ PGPRL PP + + P P ++P P PM LP Sbjct: 7 QYFSLRWNNHPVNLVSVFTGLYQAESLVDVSLAAEGRHLQAHKVVLSACSDYFQALFAANPCQHPIVILKDVSFEDLQIVVKFMYHGIVNVSSDKLPGVLKTADALQIKGL-EKNNEMLSPFL-GTS-RLLPVPTHH---GRQPSTESLPEYLHRSRSEGGFFPHRAHSAESRGYSFDSGPLEISRHKRLLSPPGSPAHNIPPGSTSLARKKFRNRSEHESTST------EDRG----EGEVKEEVKEDKSPSLYSGSDTE--------HIAKKKRAMFQSQKCSSSGSRSSELHNSSEGRSDKENKRQGSLSSSQSISHSSDR-----EELEIHQKDTLQVPGAHCRTLVRAAST---------SELNRGR-ILKRQQCQESNEEGEGVTKIEPPTSPPRITVNTPPVKRPKSFSPSPIPSPPPEEHP--ISPAPVSPHPETS-RQPSIDPLCGLESVPLLYSSSGPGPRL--PPSNLLRPHLPSVR-----VIPEPEPMHELLP 463 HSP 2 Score: 116.701 bits (291), Expect = 1.530e-23 Identity = 51/78 (65.38%), Postives = 55/78 (70.51%), Query Frame = 0 Query: 668 LSLSSSLTTSIQPDFGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETSQN 745 LS SS FGH PK RDGPAL CN CWN+TDG+GRILRRKTKY C EC NLCIVPCFQQ+HEA + E N Sbjct: 507 LSSSSGRPVGSMEQFGHCPKARDGPALSCNFCWNTTDGSGRILRRKTKYHCPECQTNLCIVPCFQQFHEALESEPQNN 584
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1330915264|gb|PNF34036.1| (hypothetical protein B7P43_G03482, partial [Cryptotermes secundus] >gi|1330915265|gb|PNF34037.1| hypothetical protein B7P43_G03482, partial [Cryptotermes secundus]) HSP 1 Score: 167.548 bits (423), Expect = 1.814e-42 Identity = 74/115 (64.35%), Postives = 93/115 (80.87%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 S Q++ L+WN+H +SVF NL NS SLVDVTLAAEG+H+QAH++VLSACS YFQ+LFS P QHPIVILKDV++ DLKT+V FMY G V VS D++ ++KTA+ML+IKGL E Sbjct: 2 SIQQFCLRWNNHQPNFISVFTNLLNSESLVDVTLAAEGRHLQAHRVVLSACSTYFQTLFSVNPCQHPIVILKDVKYNDLKTMVDFMYYGEVNVSHDQLPAILKTAEMLKIKGLAE 116
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1133423697|ref|XP_019867561.1| (PREDICTED: LOW QUALITY PROTEIN: longitudinals lacking protein, isoforms H/M/V-like [Aethina tumida]) HSP 1 Score: 172.555 bits (436), Expect = 2.215e-42 Identity = 75/113 (66.37%), Postives = 95/113 (84.07%), Query Frame = 0 Query: 46 QRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 Q+Y L+WN+H +SVF+NL NS SLVDVTLAAEGKH+QAHK+VLSACS YFQ+LF+ P QHPIVILKDV+F+DLK +V+FMY G V VS D+++ ++KTA+ML+IKGL E Sbjct: 4 QQYCLRWNNHQPNFISVFSNLLNSESLVDVTLAAEGKHLQAHKVVLSACSSYFQTLFTINPCQHPIVILKDVKFKDLKVMVEFMYYGEVNVSQDQLTHILKTAEMLKIKGLAE 116 HSP 2 Score: 97.8265 bits (242), Expect = 1.654e-17 Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 0 Query: 684 HVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHE 736 H P R GPALGCN CWN+ D +GRILRRKTKY C EC +LCIVPCFQ+YHE Sbjct: 470 HCPVVRPGPALGCNFCWNTVDTHGRILRRKTKYHCPECQTSLCIVPCFQEYHE 522
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|998513574|ref|XP_015517423.1| (PREDICTED: longitudinals lacking protein, isoforms H/M/V isoform X2 [Neodiprion lecontei]) HSP 1 Score: 170.629 bits (431), Expect = 5.453e-42 Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|820865484|ref|XP_012349250.1| (PREDICTED: protein tramtrack, alpha isoform isoform X2 [Apis florea]) HSP 1 Score: 170.244 bits (430), Expect = 8.098e-42 Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK IV FMY G V +S D++S +IKTA+ L+IKGL E + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIIVDFMYYGEVNISQDQLSSIIKTAESLKIKGLAEMHNASLTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|817058765|ref|XP_012250861.1| (longitudinals lacking protein, isoforms H/M/V isoform X5 [Athalia rosae]) HSP 1 Score: 168.318 bits (425), Expect = 9.843e-42 Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSSR 173 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHP+VILKDV F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGQHLQAHKVVLSACSTYFQSLFTVNPCQHPVVILKDVMFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSSE 131
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|1330915266|gb|PNF34038.1| (hypothetical protein B7P43_G03482, partial [Cryptotermes secundus]) HSP 1 Score: 167.162 bits (422), Expect = 1.141e-41 Identity = 74/115 (64.35%), Postives = 93/115 (80.87%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGE 158 S Q++ L+WN+H +SVF NL NS SLVDVTLAAEG+H+QAH++VLSACS YFQ+LFS P QHPIVILKDV++ DLKT+V FMY G V VS D++ ++KTA+ML+IKGL E Sbjct: 2 SIQQFCLRWNNHQPNFISVFTNLLNSESLVDVTLAAEGRHLQAHRVVLSACSTYFQTLFSVNPCQHPIVILKDVKYNDLKTMVDFMYYGEVNVSHDQLPAILKTAEMLKIKGLAE 116
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|998513570|ref|XP_015517421.1| (PREDICTED: longitudinals lacking protein, isoforms H/M/V isoform X1 [Neodiprion lecontei] >gi|998513572|ref|XP_015517422.1| PREDICTED: longitudinals lacking protein, isoforms H/M/V isoform X1 [Neodiprion lecontei]) HSP 1 Score: 170.629 bits (431), Expect = 1.152e-41 Identity = 78/129 (60.47%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK +V FMY G V VS D++ +IKTA+ L+IKGL E T + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASVTKWPSGSS 130 HSP 2 Score: 107.457 bits (267), Expect = 1.262e-20 Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARDRETS 743 GH P R GPALGCNHCWN+ D +GRILRRKTKY C EC NLCIVPCFQ++HE R RE S Sbjct: 477 LGHCPVQRPGPALGCNHCWNTIDAHGRILRRKTKYHCPECQTNLCIVPCFQEFHE-RQREVS 537
BLAST of longitudinals lacking isoform g vs. nr
Match: gi|820865482|ref|XP_012349249.1| (PREDICTED: protein tramtrack, alpha isoform isoform X1 [Apis florea]) HSP 1 Score: 170.244 bits (430), Expect = 1.373e-41 Identity = 78/129 (60.47%), Postives = 98/129 (75.97%), Query Frame = 0 Query: 44 SGQRYNLQWNDHSTQMVSVFANLFNSVSLVDVTLAAEGKHIQAHKMVLSACSDYFQSLFSATPTQHPIVILKDVQFEDLKTIVQFMYQGSVEVSSDKISDVIKTADMLQIKGLGEKFTEAANKIIEGSS 172 S Q++ L+WN+H +SVF+NL N+ +LVDVTLAAEG+H+QAHK+VLSACS YFQSLF+ P QHPIVILKDV+F DLK IV FMY G V +S D++S +IKTA+ L+IKGL E + K GSS Sbjct: 2 SMQQFCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIIVDFMYYGEVNISQDQLSSIIKTAESLKIKGLAEMHNASLTKWPSGSS 130 HSP 2 Score: 99.7525 bits (247), Expect = 4.034e-18 Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0 Query: 682 FGHVPKGRDGPALGCNHCWNSTDGNGRILRRKTKYQCVECGVNLCIVPCFQQYHEARD 739 GH P R GPAL CNHCWN+ D GR LRRKTKY C +C NLCIVPCFQ+YHE R+ Sbjct: 473 VGHCPVLRPGPALRCNHCWNTIDAQGRTLRRKTKYHCPQCQDNLCIVPCFQEYHERRE 530 The following BLAST results are available for this feature:
BLAST of longitudinals lacking isoform g vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of longitudinals lacking isoform g vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of longitudinals lacking isoform g vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold170_size291898:168722..175248- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold170_size291898-snap-gene-1.57 ID=maker-scaffold170_size291898-snap-gene-1.57|Name=longitudinals lacking isoform g|organism=Tigriopus kingsejongensis|type=gene|length=6527bp|location=Sequence derived from alignment at scaffold170_size291898:168722..175248- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'longitudinals lacking isoform g' has the following synonyms
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