aael007952- partial, maker-scaffold17_size721972-snap-gene-6.26 (gene) Tigriopus kingsejongensis

Overview
Nameaael007952- partial
Unique Namemaker-scaffold17_size721972-snap-gene-6.26
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of aael007952- partial vs. L. salmonis genes
Match: EMLSAG00000008412 (supercontig:LSalAtl2s:LSalAtl2s514:269922:273994:1 gene:EMLSAG00000008412 transcript:EMLSAT00000008412 description:"maker-LSalAtl2s514-augustus-gene-2.21")

HSP 1 Score: 83.1889 bits (204), Expect = 2.104e-19
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    6 SRSTLAFSGLPPPFLAAMSKLFRMLDQDEDGWIRYEDIARRWHPCPPSLNANLPVNILANLRKVTTEGGLLSFERFCAGLKIAILRHE 93
            S+ +  F  LPP F+ +M KLF   D D  G I    I  RW+P   +   NLP +++ +L KVT   G L+FERFCAGLKIAILRH+
Sbjct:   25 SKMSETFRDLPPTFVHSMKKLFDYFDVDHSGRIPIATICSRWNP-DKARAENLPPDLIRHLEKVTDRRGFLTFERFCAGLKIAILRHQ 111          
BLAST of aael007952- partial vs. SwissProt
Match: gi|81905617|sp|Q9D818.1|SAPC2_MOUSE (RecName: Full=Suppressor APC domain-containing protein 2; AltName: Full=Protein Ang)

HSP 1 Score: 63.1586 bits (152), Expect = 6.992e-11
Identity = 32/94 (34.04%), Postives = 49/94 (52.13%), Query Frame = 0
Query:   14 GLPPPFLAAMSKLFRMLDQDEDGWIRYEDIARRWHPCPPSLNANLPVNILANLRKVTTEGGLLSFERFCAGLKIAILRHEADKHRLAQSEDLPG 107
            GLP  FL ++  LF +LD  + G++   +I  RW          LP  +L  LR+V    G L+FERF AGL+ ++L+ +  +   A+    PG
Sbjct:   23 GLPRAFLQSLRTLFDILDDRQRGYVHLREIESRWQGADAR---ELPCGVLEGLRQVAPANGYLTFERFVAGLRTSLLKADGGQRDQARVAARPG 113          
BLAST of aael007952- partial vs. SwissProt
Match: gi|147638520|sp|Q86UD0.2|SAPC2_HUMAN (RecName: Full=Suppressor APC domain-containing protein 2; AltName: Full=Tumor specificity and mitosis phase-dependent expression protein; Short=TS/MDEP; AltName: Full=p42.3)

HSP 1 Score: 56.225 bits (134), Expect = 1.453e-8
Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 0
Query:   14 GLPPPFLAAMSKLFRMLDQDEDGWIRYEDIARRWHPCPPSLNANLPVNILANLRKVTTEGGLLSFERFCAGLKIAIL 90
            GLP  FL ++  LF +LD    G +   +I  RW          LP  +L  LR+V    G L+FERF AGL+ ++L
Sbjct:   23 GLPRAFLQSLRTLFDILDDRRRGCVHLREIESRWQGTDAR---ELPRGVLEGLRQVAPASGYLTFERFVAGLRTSLL 96          
BLAST of aael007952- partial vs. nr
Match: gi|1036790019|ref|XP_016974341.1| (PREDICTED: suppressor APC domain-containing protein 2 isoform X2 [Drosophila rhopaloa])

HSP 1 Score: 80.8777 bits (198), Expect = 1.382e-14
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 0
Query:    3 GGTSR------STLAFSGLPPPFLAAMSKLFRMLDQDEDGWIRYEDIARRWHPCPPSLNANLPVNILANLRKVTTEGGLLSFERFCAGLKIAILRHE 93
            GGTS        +L    LP  F+ +M KLF +LD  + G++RY DI + W       +  LP  +L +LR+VT   GLLSFERFCAGLK+ +LR++
Sbjct:   19 GGTSNPNQAQCQSLDMDALPKQFVMSMKKLFDILDDKQSGYVRYTDIEKGWQDDG---SKGLPRGVLDSLRRVTPSSGLLSFERFCAGLKLCLLRNQ 112          
BLAST of aael007952- partial vs. nr
Match: gi|1036790003|ref|XP_016974340.1| (PREDICTED: suppressor APC domain-containing protein 2 isoform X1 [Drosophila rhopaloa])

HSP 1 Score: 80.8777 bits (198), Expect = 1.480e-14
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 0
Query:    3 GGTSR------STLAFSGLPPPFLAAMSKLFRMLDQDEDGWIRYEDIARRWHPCPPSLNANLPVNILANLRKVTTEGGLLSFERFCAGLKIAILRHE 93
            GGTS        +L    LP  F+ +M KLF +LD  + G++RY DI + W       +  LP  +L +LR+VT   GLLSFERFCAGLK+ +LR++
Sbjct:   48 GGTSNPNQAQCQSLDMDALPKQFVMSMKKLFDILDDKQSGYVRYTDIEKGWQD---DGSKGLPRGVLDSLRRVTPSSGLLSFERFCAGLKLCLLRNQ 141          
BLAST of aael007952- partial vs. nr
Match: gi|1227099059|gb|OXU23062.1| (hypothetical protein TSAR_005787 [Trichomalopsis sarcophagae])

HSP 1 Score: 80.8777 bits (198), Expect = 1.493e-14
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   11 AFSGLPPPFLAAMSKLFRMLDQDEDGWIRYEDIARRWHPCPPSLNANLPVNILANLRKVTTEGGLLSFERFCAGLKIAILRHEAD 95
            +  GLP  F++AM  LF ++D    G++ Y DI  RW     S    LP  +L  L+KVT   GLLSFERFCAGLKI +L  +AD
Sbjct:    8 SIDGLPKHFVSAMRTLFDIMDDQNTGYVNYADIEARWRDDGAS---GLPKGVLDGLKKVTPPNGLLSFERFCAGLKICLLHAQAD 89          
BLAST of aael007952- partial vs. nr
Match: gi|644999070|ref|XP_008215405.1| (PREDICTED: suppressor APC domain-containing protein 2 isoform X2 [Nasonia vitripennis])

HSP 1 Score: 80.8777 bits (198), Expect = 1.582e-14
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   11 AFSGLPPPFLAAMSKLFRMLDQDEDGWIRYEDIARRWHPCPPSLNANLPVNILANLRKVTTEGGLLSFERFCAGLKIAILRHEAD 95
            +  GLP  F++AM  LF ++D    G++ Y DI  RW     S    LP  +L  L+KVT   GLLSFERFCAGLKI +L  +AD
Sbjct:    8 SIDGLPKHFVSAMRTLFDIMDDQNTGYVNYADIEARWRDDGAS---GLPKGVLDGLKKVTPPNGLLSFERFCAGLKICLLHAQAD 89          
BLAST of aael007952- partial vs. nr
Match: gi|345479438|ref|XP_001606798.2| (PREDICTED: suppressor APC domain-containing protein 2 isoform X1 [Nasonia vitripennis] >gi|1032743611|ref|XP_016837936.1| PREDICTED: suppressor APC domain-containing protein 2 isoform X1 [Nasonia vitripennis])

HSP 1 Score: 80.8777 bits (198), Expect = 1.617e-14
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   11 AFSGLPPPFLAAMSKLFRMLDQDEDGWIRYEDIARRWHPCPPSLNANLPVNILANLRKVTTEGGLLSFERFCAGLKIAILRHEAD 95
            +  GLP  F++AM  LF ++D    G++ Y DI  RW     S    LP  +L  L+KVT   GLLSFERFCAGLKI +L  +AD
Sbjct:    8 SIDGLPKHFVSAMRTLFDIMDDQNTGYVNYADIEARWRDDGAS---GLPKGVLDGLKKVTPPNGLLSFERFCAGLKICLLHAQAD 89          
The following BLAST results are available for this feature:
BLAST of aael007952- partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000084122.104e-1947.73supercontig:LSalAtl2s:LSalAtl2s514:269922:273994:1... [more]
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BLAST of aael007952- partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
gi|81905617|sp|Q9D818.1|SAPC2_MOUSE6.992e-1134.04RecName: Full=Suppressor APC domain-containing pro... [more]
gi|147638520|sp|Q86UD0.2|SAPC2_HUMAN1.453e-837.66RecName: Full=Suppressor APC domain-containing pro... [more]
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BLAST of aael007952- partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1036790019|ref|XP_016974341.1|1.382e-1443.30PREDICTED: suppressor APC domain-containing protei... [more]
gi|1036790003|ref|XP_016974340.1|1.480e-1443.30PREDICTED: suppressor APC domain-containing protei... [more]
gi|1227099059|gb|OXU23062.1|1.493e-1447.06hypothetical protein TSAR_005787 [Trichomalopsis s... [more]
gi|644999070|ref|XP_008215405.1|1.582e-1447.06PREDICTED: suppressor APC domain-containing protei... [more]
gi|345479438|ref|XP_001606798.2|1.617e-1447.06PREDICTED: suppressor APC domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold17_size721972supercontigscaffold17_size721972:645089..645844 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold17_size721972-snap-gene-6.26-mRNA-1maker-scaffold17_size721972-snap-gene-6.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold17_size721972:645089..645844+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold17_size721972-snap-gene-6.26 ID=maker-scaffold17_size721972-snap-gene-6.26|Name=aael007952- partial|organism=Tigriopus kingsejongensis|type=gene|length=756bp|location=Sequence derived from alignment at scaffold17_size721972:645089..645844+ (Tigriopus kingsejongensis)
CTGTCATTGGAGATGATGACCGTTAGGGCGGCAACAGCAGCCAGCCACAG GTGTGAGTAGCTCGGAGTGGACATATGGAACATGAGTGGTGGAACATCGC GATCGACTTTGGCCTTTTCGGGCTTGCCCCCGCCCTTTTTGGCTGCCATG AGCAAGCTCTTTCGAATGTTGGACCAGGATGAGGATGGATGGATTCGCTA TGAAGGTGAGACAGGCACAATAAATTGAAGGCAAGGATAAGAACATGAAA CCCTTGGCCACTGCTCTCTCCAGATATTGCACGTCGTTGGCATCCATGTC CACCGAGCTTGAATGCCAATTTGCCCGTGAATATCTTGGCCAACTTGCGG AAAGTGACGACCGAGGGGGGGTTGCTGTCCTTTGAACGCTTTTGCGCGGG TCTCAAGATCGCCATTCTGCGCCATGAGGCCGACAAGCACCGTCTGGCTC AATCCGAGGATCTACCTGGTTCACCACGGCGAATTCGTTCCAAGGTGAGT ACTCCCTGTATGATGAGTAACCTTCATTTTAAACCGAAATGTTCTATGAT CGATCCGCCAGAATCCCCGGGGTACCCCTGATGGTTCCCCCGAGTCTCGT CCCCGGACCTATTCCTCGGGTTCCAGTCCACGAGAGACGTCGGACGTGTC CGATCAATCCACTCCATTCTCTCCCATCAATCGCACTCACAGTCTACCCA ATTTGTGCGATGGATCTCAACCGCTGCAGATCGCCCGTGAATCCTCACCG GCGCCA
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Synonyms
The feature 'aael007952- partial' has the following synonyms
Synonym
Tk09982
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