lissencephaly-1-like protein, maker-scaffold188_size271682-snap-gene-1.28 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000003976 (supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 gene:EMLSAG00000003976 transcript:EMLSAT00000003976 description:"augustus_masked-LSalAtl2s213-processed-gene-0.0") HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0 Identity = 295/410 (71.95%), Postives = 342/410 (83.41%), Query Frame = 0 Query: 16 MVLSQRQREELNKAIAEYMQSNGYTDALENFKRETDMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MVLSQRQREELNKAIA+YM SNGY + LE FKRETD PG+IDKKF GLLEKKWTSVIRLQKKVNELEAKLAEAEKE+I+GAPTR+KR+P +WIPRPPE+++LSGH +WDFETGD+ERTLKGHTD VQDI FD GKLLVSCSADMSIKIWDFQ+Y+C+KTLQGHDHNVSSVCF P+GD+I+S SRDK+IKMWE ATGYCV+TY GHREWVR VRV D +A+CSNDQ+VRVW+ TKDCK ELR+HDHVVEC++WAPESA INEA + + K GPFLASGSRDKTIK+WDV++G LFT VGHDNW+RGLV+HPGGKYLLSASDDKT+R+WD+AHKRC KRLD+H+HFCTS+DFH++ P++V+GSVDQT+KIWECR Sbjct: 1 MVLSQRQREELNKAIADYMLSNGYNETLEXFKRETDSPGEIDKKFHGLLEKKWTSVIRLQKKVNELEAKLAEAEKEYIAGAPTRDKRSPSDWIPRPPERFSLSGH--------------------------LWDFETGDYERTLKGHTDCVQDIGFDSPGKLLVSCSADMSIKIWDFQTYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVRTYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDCKDELRDHDHVVECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYVGHDNWVRGLVWHPGGKYLLSASDDKTIRVWDIAHKRCHKRLDSHSHFCTSIDFHKTYPYIVSGSVDQTIKIWECR 384
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 158.303 bits (399), Expect = 2.514e-44 Identity = 96/292 (32.88%), Postives = 149/292 (51.03%), Query Frame = 0 Query: 109 PRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDH-VVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFH----PGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHT 394 P K+TL+GH V+ V F P + S+S D +KVW G FE+T+ GH + D+A+ +LLVS S D ++KIW+ S C+KTL+GH + V F P + ++S S D+S+++W+V TG C+KT H + V V D I + S D R+W + C L ++D+ V V ++P G ++ + + D T+K+W+ + G CL T GH N + VF GGK+++S S+D + IW+L K ++L HT Sbjct: 18 PNYSLKFTLAGHTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDNPPVSFVKFSPN----------------------GKYILAATLDNTLKLWEYSKGKCLKTYSGHRN-EKYCVFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHT 286 HSP 2 Score: 141.739 bits (356), Expect = 3.213e-38 Identity = 88/272 (32.35%), Postives = 133/272 (48.90%), Query Frame = 0 Query: 158 TLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVY-GDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLV-FHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTH--FCTSLDFHRSG-PFVVTGSVDQTVKIWECR 424 TL GHT V + F G+ L S SAD IK+W KT+ GH +S V + ++S S DK++K+WE+++G C+KT KGH +V + + S D++VR+W ++T C L H V V + + G + S S D +IWD SG CL TL+ +DN V F P GKY+L+A+ D TL++W+ + +C K H + +C +F +G ++V+GS D V IW + Sbjct: 25 TLAGHTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD----------------------GSLIVSSSYDGXCRIWDTASGQCLKTLIDNDNPPVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSGHRNEKYCVFANFSVTGGKWIVSGSEDNMVYIWNLQ 274 HSP 3 Score: 129.413 bits (324), Expect = 1.051e-33 Identity = 73/181 (40.33%), Postives = 105/181 (58.01%), Query Frame = 0 Query: 116 TLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHN-VSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMV----RVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVV 291 TL GH V F+P +LV+S S D +V++WD TG +TL H+D V + F+ G L+VS S D +IWD S C+KTL +D+ VS V F P+G +I++ + D ++K+WE + G C+KTY GHR V V G ++I + S D V +W LQTK+ +L+ H VV Sbjct: 109 TLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDNPPVSFVKFSPNGKYILAATLDNTLKLWEYSKGKCLKTYSGHRNEKYCVFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVV 289 HSP 4 Score: 50.447 bits (119), Expect = 5.512e-7 Identity = 24/77 (31.17%), Postives = 42/77 (54.55%), Query Frame = 0 Query: 346 FTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWE 422 FTL GH + + F P G++L S+S DK +++W + +K + H + + + +V+ S D+T+KIWE Sbjct: 24 FTLAGHTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWE 100
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000001730 (supercontig:LSalAtl2s:LSalAtl2s129:321159:324031:-1 gene:EMLSAG00000001730 transcript:EMLSAT00000001730 description:"maker-LSalAtl2s129-snap-gene-3.7") HSP 1 Score: 145.976 bits (367), Expect = 1.687e-38 Identity = 97/318 (30.50%), Postives = 156/318 (49.06%), Query Frame = 0 Query: 110 RPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHF---CTSLDFHRSGPFVVTGSVDQTVKIWECR 424 RPP+ L GH V L + ++S S+D+T+KVW TG RTL GHT V + ++VS S D S+K+W+ + C+ TL GH V C + ++S SRD ++++W++ TG C+ GH VR V+ Y + + + + D V+VW + ++C L H N+ +F G + SGS D +I++WDV +G+C L+GH + G+ L+S + D T+++WD+ + +C + L H T L F + FV+T S D TVK+W+ + Sbjct: 315 RPPK--VLKGHDDHVITCLQFS-NNRIVSGSDDNTLKVWSATTGKCLRTLVGHTGGVWSXQM--RDNIIVSGSTDRSLKVWNADAGTCVHTLYGHTSTVR--CMHLHENQVVSGSRDSTLRIWDIETGECLHILAGHLAAVRCVQ-YDGRLVVSGAYDYMVKVWNPEREECLHTLSGHT------------------------NRVYSLQFDGIHVVSGSLDTSIRVWDVETGACKHALMGHQSLTSGMELR--NNILVSGNADSTVKVWDITNGQCLQTLSGHNKHQSAVTCLQF--NSKFVITSSDDGTVKLWDVK 596 HSP 2 Score: 115.546 bits (288), Expect = 5.260e-28 Identity = 73/236 (30.93%), Postives = 121/236 (51.27%), Query Frame = 0 Query: 115 YTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVG 350 +TL GH + V + H + V+S S DST+++WD ETG+ L GH +V+ + +DG +L+VS + D +K+W+ + +C+ TL GH + V S+ F G H++S S D SI++W+V TG C GH+ + + + + + + D TV+VW + C L H+ +SA + +F F+ + S D T+K+WDV +G + LV Sbjct: 399 HTLYGHTSTVRCMHLHE--NQVVSGSRDSTLRIWDIETGECLHILAGHLAAVRCVQYDG--RLVVSGAYDYMVKVWNPEREECLHTLSGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGACKHALMGHQSLTSGMELR-NNILVSGNADSTVKVWDITNGQCLQTLSGHN--------KHQSAVTCL-------------QFNSKFVITSSDDGTVKLWDVKTGEFVRDLVA 606 HSP 3 Score: 83.5741 bits (205), Expect = 1.460e-17 Identity = 59/219 (26.94%), Postives = 102/219 (46.58%), Query Frame = 0 Query: 225 RDKSIKM-WEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDN----KADGGKFMGPF----------------LASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWE 422 R +I+M W + K KGH + V + + I + S+D T++VW+ T C L H V W+ + I +++ + AD G + + SGSRD T++IWD+ +G CL L GH +R + + G+ ++S + D +++W+ + C L HT+ SL F G VV+GS+D ++++W+ Sbjct: 301 RQHNIEMNWRIRPIRPPKVLKGHDDHVITCLQFSNNRIVSGSDDNTLKVWSATTGKCLRTLVGHTGGV----WSXQMRDNIIVSGSTDRSLKVWNADAGTCVHTLYGHTSTVRCMHLHENQVVSGSRDSTLRIWDIETGECLHILAGHLAAVRCVQY--DGRLVVSGAYDYMVKVWNPEREECLHTLSGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 511
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000004113 (supercontig:LSalAtl2s:LSalAtl2s217:732115:733862:-1 gene:EMLSAG00000004113 transcript:EMLSAT00000004113 description:"maker-LSalAtl2s217-augustus-gene-7.26") HSP 1 Score: 120.168 bits (300), Expect = 5.455e-30 Identity = 86/315 (27.30%), Postives = 134/315 (42.54%), Query Frame = 0 Query: 117 LSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYG-DQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCT--------SLDFHRSGPFVVTGSVDQTVKIWE 422 +SGH V V F P + + D +K+WD +G + +L GH +V+ +A + L SC D +K WD + I+ GH V + P+ D ++SC RD + ++W++ T + T GH V V D I T SND T+R+W L L H V V P T + +AS DN IK W + G + L GH+ + + + G L+S +D+ T+ WD +R A + + F +SG +VT D+T+KI++ Sbjct: 192 VSGHIGWVRCVAFEPGNEWFCTGAADRVIKIWDLASGKLKLSLTGHVSTVRGLAVSARQPYLFSCGEDRQVKXWDLEYNKVIRHYHGHLSAVYDLALHPTIDVLVSCGRDSTARVWDMRTKVNIHTLTGHTSTVGTVACQATDPQIITGSNDSTIRLWDLAAXKSMAXLXNHKKSVRAVVMHP---TLDMMASASPDN--------------------IKEWRMPEGKFIQNLSGHNAIVNCMAVNSDG-VLVSGADNGTMYFWDWKTGYNFQRTQAPVQPGSLDSEAGVFQMKFDQSGSRLVTCEADKTIKIYK 482 HSP 2 Score: 99.3673 bits (246), Expect = 8.392e-23 Identity = 66/267 (24.72%), Postives = 114/267 (42.70%), Query Frame = 0 Query: 157 RTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWE 422 R + GH V+ +AF+ + + +AD IKIWD S +L GH V + ++ SC D+ +K W++ ++ Y GH V + ++ + +C D T RVW ++TK L H V VA + P + +GS D TI++WD+ + + L H +R +V HP + SAS D ++ W + + + L H + + G +V+G+ + T+ W+ Sbjct: 190 RVVSGHIGWVRCVAFEPGNEWFCTGAADRVIKIWDLASGKLKLSLTGHVSTVRGLAVSARQPYLFSCGEDRQVKXWDLEYNKVIRHYHGHLSAVYDLALHPTIDVLVSCGRDSTARVWDMRTKVNIHTLTGHTSTVGTVAC----------------------QATDPQIITGSNDSTIRLWDLAAXKSMAXLXNHKKSVRAVVMHPTLDMMASASPDN-IKEWRMPEGKFIQNLSGHNAIVNCMAVNSDG-VLVSGADNGTMYFWD 432 HSP 3 Score: 91.6633 bits (226), Expect = 2.742e-20 Identity = 68/253 (26.88%), Postives = 108/253 (42.69%), Query Frame = 0 Query: 114 KYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESA-----------------------TPAINEAASEDNKADGGKFMGPFLASGSR------DKTIKIW 337 K +L+GH + V + + S ED VK WD E R GH +V D+A +LVSC D + ++WD ++ I TL GH V +V + II+ S D +I++W++A + H++ VR V ++ + ++ ++ W + L H+ +V C+A + T A + S D++A G F F SGSR DKTIKI+ Sbjct: 231 KLSLTGHVSTVRGLAVSARQPYLFSCGEDRQVKXWDLEYNKVIRHYHGHLSAVYDLALHPTIDVLVSCGRDSTARVWDMRTKVNIHTLTGHTSTVGTVACQATDPQIITGSNDSTIRLWDLAAXKSMAXLXNHKKSVRAVVMHPTLDMMASASPDNIKEWRMPEGKFIQNLSGHNAIVNCMAVNSDGVLVSGADNGTMYFWDWKTGYNFQRTQAPVQPGSLDSEA--GVFQMKFDQSGSRLVTCEADKTIKIY 481 HSP 4 Score: 66.2402 bits (160), Expect = 5.348e-12 Identity = 30/98 (30.61%), Postives = 50/98 (51.02%), Query Frame = 0 Query: 327 SGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 +G+ D+ IKIWD+ SG +L GH + +RGL YL S +D+ ++ WDL + + + H L H + +V+ D T ++W+ R Sbjct: 213 TGAADRVIKIWDLASGKLKLSLTGHVSTVRGLAVSARQPYLFSCGEDRQVKXWDLEYNKVIRHYHGHLSAVYDLALHPTIDVLVSCGRDSTARVWDMR 310
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000009719 (supercontig:LSalAtl2s:LSalAtl2s627:20682:23106:-1 gene:EMLSAG00000009719 transcript:EMLSAT00000009719 description:"snap_masked-LSalAtl2s627-processed-gene-0.29") HSP 1 Score: 114.39 bits (285), Expect = 1.299e-27 Identity = 91/344 (26.45%), Postives = 145/344 (42.15%), Query Frame = 0 Query: 116 TLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYD--CIKTLQGHDHNVSSVCFVP------SGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREH-----------DHVVECVAWAPESATPAINEAASEDN---------------KADGGKFMGPFLASGSRDKTIKIWDV-TSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 +L GH PV F P + S S D+TV+ WD T +GH V +A+ G L S I +WD ++ + +TL GH + + ++ + P H S S+D I++W++A G C+++ H + V ++ G I + S D+T++VW L+ H D+V+ A+ P A+ +S K+ GG L SGS D T+ +W T L GH + + F P +Y+ SAS DK++R+WD + H L + +V+GS D TVK+W + Sbjct: 123 SLCGHGEPVIVASFSPNGQYLASGSGDATVRFWDLSTETPHFKCEGHIQWVLALAWAPDGSRLASGDRRGGILLWDPKTGNKTVGRTLSGHSNFIXALVWEPLHLSGGESKHFASASKDGDIRIWDIA-GRCLRSLTSHTQNVTCLKWGGSGLIYSASQDRTIKVWRASDGTLCRTLQGHGHWVNVLALNTDYVIRTGAFDPAKASLLPRSLSSYPKEELKKSAELRYNHLIKSAGGT---EILVSGSDDFTLFLWKPETDKKSYARLTGHQQTVNDVKFSPDARYIASASFDKSIRLWDGRTGKFMAXFRGHVQAVYQLAWXLDSRLIVSGSADSTVKLWSVK 462 HSP 2 Score: 103.99 bits (258), Expect = 2.984e-24 Identity = 82/333 (24.62%), Postives = 150/333 (45.05%), Query Frame = 0 Query: 115 YTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGD--FERTLKGHTDSVQDIAFD------GQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSND--------QTVRVWALQTKDCKLELREHDHVVECVA----------------WAPESATPAINEAASEDNKADGGKFM--GPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGS 413 + GH V + + P S + S + +WD +TG+ RTL GH++ + + ++ G+ K S S D I+IWD C+++L H NV+ + + SG I S S+D++IK+W + G +T +GH WV ++ + D I T + D +++ + + ELR ++H+++ W PE+ + + KF ++AS S DK+I++WD +G + GH + L + + ++S S D T+++W + +K+ L H +D+ G VV+G+ Sbjct: 164 FKCEGHIQWVLALAWAPDGSRLASGDRRGGILLWDPKTGNKTVGRTLSGHSNFIXALVWEPLHLSGGESKHFASASKDGDIRIWDIAGR-CLRSLTSHTQNVTCLKWGGSG-LIYSASQDRTIKVWRASDGTLCRTLQGHGHWVNVLALNTDYVIRTGAFDPAKASLLPRSLSSYPKEELKKSAELR-YNHLIKSAGGTEILVSGSDDFTLFLWKPETDKKSYARLTGHQQTVNDVKFSPDARYIASASFDKSIRLWDGRTGKFMAXFRGHVQAVYQLAWXLDSRLIVSGSADSTVKLWSVKNKKLHTDLPGHGADVYCVDWSPDGQRVVSGA 493 HSP 3 Score: 72.7886 bits (177), Expect = 5.204e-14 Identity = 84/333 (25.23%), Postives = 136/333 (40.84%), Query Frame = 0 Query: 107 WIPRPPEKY---TLSGHRAPVTKVLFHPIF------SLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDH--NVSSV---------CFVPSG------------------------DHII----------SCSRDKSIKMWEVATGYCVKTYK---GHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDL 381 W P+ K TLSGH + +++ P+ SAS+D +++WD G R+L HT +V + + G G L+ S S D +IK+W +TLQGH H NV ++ F P+ +H+I S S D ++ +W+ T K+Y GH++ V V+ D +YIA+ S D+++R+W +T R H V +AW +S + SGS D T+K+W V + L GH + + + P G+ ++S + L + L Sbjct: 197 WDPKTGNKTVGRTLSGHSNFIXALVWEPLHLSGGESKHFASASKDGDIRIWDI-AGRCLRSLTSHTQNVTCLKWGGSG-LIYSASQDRTIKVWRASDGTLCRTLQGHGHWVNVLALNTDYVIRTGAFDPAKASLLPRSLSSYPKEELKKSAELRYNHLIKSAGGTEILVSGSDDFTLFLWKPETDK--KSYARLTGHQQTVNDVKFSPDARYIASASFDKSIRLWDGRTGKFMAXFRGHVQAVYQLAWXLDSR----------------------LIVSGSADSTVKLWSVKNKKLHTDLPGHGADVYCVDWSPDGQRVVSGAGSHPLYLLFL 503 HSP 4 Score: 71.2478 bits (173), Expect = 1.756e-13 Identity = 54/176 (30.68%), Postives = 85/176 (48.30%), Query Frame = 0 Query: 54 GDIDKKFAGLLEKKWTSVIRLQ-KKVNELE----AKLAEAEKEFISGAPTREKRTPGEWIPRPPEK--YTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIIS 222 G D A LL + +S + + KK EL K A + +SG+ + T W P +K L+GH+ V V F P + SAS D ++++WD TG F +GH +V +A+ +L+VS SAD ++K+W ++ L GH +V V + P G ++S Sbjct: 319 GAFDPAKASLLPRSLSSYPKEELKKSAELRYNHLIKSAGGTEILVSGS---DDFTLFLWKPETDKKSYARLTGHQQTVNDVKFSPDARYIASASFDKSIRLWDGRTGKFMAXFRGHVQAVYQLAWXLDSRLIVSGSADSTVKLWSVKNKKLHTDLPGHGADVYCVDWSPDGQRVVS 491 HSP 5 Score: 68.9366 bits (167), Expect = 7.846e-13 Identity = 56/220 (25.45%), Postives = 96/220 (43.64%), Query Frame = 0 Query: 197 CIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQT--KDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFH-----RSGPF 408 C +L GH V F P+G ++ S S D +++ W+++T +GH +WV + D +A+ + +W +T K L H + + + W P + GG+ AS S+D I+IWD+ +G CL +L H + L + G + SAS D+T+++W + + L H H+ L + R+G F Sbjct: 120 CTSSLCGHGEPVIVASFSPNGQYLASGSGDATVRFWDLSTETPHFKCEGHIQWVLALAWAPDGSRLASGDRRGGILLWDPKTGNKTVGRTLSGHSNFIXALVWEPLHLS--------------GGE--SKHFASASKDGDIRIWDI-AGRCLRSLTSHTQNVTCLKWG-GSGLIYSASQDRTIKVWRASDGTLCRTLQGHGHWVNVLALNTDYVIRTGAF 321
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000009105 (supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1 gene:EMLSAG00000009105 transcript:EMLSAT00000009105 description:"maker-LSalAtl2s573-augustus-gene-2.14") HSP 1 Score: 109.768 bits (273), Expect = 5.632e-27 Identity = 92/335 (27.46%), Postives = 141/335 (42.09%), Query Frame = 0 Query: 108 IPRPPEKYT-LSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGH-----------TDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFH---PGGK------YLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIW 421 I P EK L GH K ++P+ L++S S DST ++W E + H T V + ++ G LL + D +IW + KTL H + V + SG++I+S S D++ +W+ TG + + H + V D+ A+CS D+ + V L + H + V + W P+ G FLASGS D T+K+W + S + L H I + + PG L+SAS D T+R+WD+ C L H +S+ F G F+ +GS D+ V IW Sbjct: 7 IEIPAEKANVLKGHNEEAFKCAWNPMQDLLVSGSADSTARIWHMEDSQQWDIILKHGKGREDCYIPCTTDVTSLDWNSSGSLLATGFYDGIARIWS-TTGKLEKTLGKHKGPIFGVKWNKSGNYILSASEDRTTIIWDSQTGNHNQQFAFHSAPILDVDWQTDESFASCSKDKCIHVCKLGVEKPIKSFYGHTNEVHSIKWDPQ----------------------GKFLASGSNDTTLKVWCMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLTRHQETVSSVAFSPDGKFLASGSYDKFVYIW 318 HSP 2 Score: 107.842 bits (268), Expect = 2.408e-26 Identity = 78/295 (26.44%), Postives = 135/295 (45.76%), Query Frame = 0 Query: 124 VTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVR-VYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHK---RCQKRLDAHTHFCTSLDFHRSGPFVVTGSV 414 VT + ++ SL+ + D ++W TG E+TL H + + ++ G ++S S D + IWD Q+ + + H + V + + + SCS+DK I + ++ +K++ GH V ++ +++A+ SND T++VW + + +L+ H + + W+ P N ++ L S S D T+++WDV GSCL TL H + + F P GK+L S S DK + IW + RC K A C + + G G+V Sbjct: 77 VTSLDWNSSGSLLATGFYDGIARIWS-TTGKLEKTLGKHKGPIFGVKWNKSGNYILSASEDRTTIIWDSQTGNHNQQFAFHSAPILDVDW-QTDESFASCSKDKCIHVCKLGVEKPIKSFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVWCMDKESHVHDLKAHSKAIYTIKWS--CTGPGTNNPNAD-----------LVLVSASYDSTVRLWDVERGSCLHTLTRHQETVSSVAFSPDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGAIYEVCWNYRGDKVGACASDGNV 356 HSP 3 Score: 81.6481 bits (200), Expect = 2.878e-17 Identity = 50/170 (29.41%), Postives = 77/170 (45.29%), Query Frame = 0 Query: 116 TLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGK---------LLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQ 276 + GH V + + P + S S D+T+KVW + LK H+ ++ I + G +LVS S D ++++WD + C+ TL H VSSV F P G + S S DK + +W G V+ YKG + Y + C++D V V L+ Sbjct: 193 SFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVWCMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLTRHQETVSSVAFSPDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGAIYEVCWNYRGDKVGACASDGNVFVLDLR 362 HSP 4 Score: 74.3294 bits (181), Expect = 7.055e-15 Identity = 73/287 (25.44%), Postives = 124/287 (43.21%), Query Frame = 0 Query: 157 RTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIW---DFQSYDCI-KTLQGHDH-------NVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVR-VYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGP---------FVVTGSVDQTVKIWE 422 LKGH + A++ LLVS SAD + +IW D Q +D I K +G + +V+S+ + SG + + D ++W TG KT H+ + V+ YI + S D+T +W QT + + H + V W + + AS S+DK I + + + + GH N + + + P GK+L S S+D TL++W + + L AH+ ++ + +GP +V+ S D TV++W+ Sbjct: 15 NVLKGHNEEAFKCAWNPMQDLLVSGSADSTARIWHMEDSQQWDIILKHGKGREDCYIPCTTDVTSLDWNSSGSLLATGFYDGIARIWST-TGKLEKTLGKHKGPIFGVKWNKSGNYILSASEDRTTIIWDSQTGNHNQQFAFHSAPILDVDWQTDES-----------------------FASCSKDKCIHVCKLGVEKPIKSFYGHTNEVHSIKWDPQGKFLASGSNDTTLKVWCMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWD 277
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000003862 (supercontig:LSalAtl2s:LSalAtl2s209:625539:633615:-1 gene:EMLSAG00000003862 transcript:EMLSAT00000003862 description:"maker-LSalAtl2s209-snap-gene-5.15") HSP 1 Score: 110.538 bits (275), Expect = 2.601e-26 Identity = 77/290 (26.55%), Postives = 127/290 (43.79%), Query Frame = 0 Query: 134 SLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQ--YIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIW 421 S++ + D+ +KVW + LK D + DI D D+ ++ + S +TL GH V + F P ++SCS D +I++W C Y+GH V V+ + Q Y A+ +D+TV +W+ + H V+C+A+ P ++ASGS D+++++WD SG+C+ + GH + L F P G++L S D + WD+AH L H+ T+L F R G + S D + +W Sbjct: 341 SILGAGFSDAAIKVWSLLPSKL-KVLKS-ADELGDINRDAD---------DVLHRMMEDNSGVVSRTLYGHSGPVYGISFSPDKSMLLSCSEDGTIRLW-----IC---YRGHMYAVWHVK-FSPQGYYFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCN----------------------YIASGSSDRSVRVWDCVSGNCVRLMTGHKTAVSTLAFSPDGRFLASGGRDSRVLFWDIAHGHLLADLSNHSQTVTALAFSRDGNILAXSSTDFXLAMW 588 HSP 2 Score: 83.5741 bits (205), Expect = 1.672e-17 Identity = 49/159 (30.82%), Postives = 72/159 (45.28%), Query Frame = 0 Query: 119 GHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQ 276 GH V V F P SA D TV +W E R GH V IAF + S S+D S+++WD S +C++ + GH VS++ F P G + S RD + W++A G+ + H + V + D +A S D + +W Q Sbjct: 433 GHMYAVWHVKFSPQGYYFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCNYIASGSSDRSVRVWDCVSGNCVRLMTGHKTAVSTLAFSPDGRFLASGGRDSRVLFWDIAHGHLLADLSNHSQTVTALAFSRDGNILAXSSTDFXLAMWXFQ 591 HSP 3 Score: 78.1814 bits (191), Expect = 9.495e-16 Identity = 62/262 (23.66%), Postives = 103/262 (39.31%), Query Frame = 0 Query: 165 SVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSI---KMWEVATGYCVKTYKGHREWVRMVRVYGDQ-YIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWE 422 S+ I +L + +D +IK+W S + + S D + +RD +M E +G +T GH V + D+ + +CS D T+R+W C R H + V V ++P+ G + AS DKT+ +W L GH + + + FHP Y+ S S D+++R+WD C + + H ++L F G F+ +G D V W+ Sbjct: 330 SLTAIEITDDSSILGAGFSDAAIKVWSLLP--------------SKLKVLKSADELGDINRDADDVLHRMMEDNSGVVSRTLYGHSGPVYGISFSPDKSMLLSCSEDGTIRLWI-----C---YRGHMYAVWHVKFSPQ----------------------GYYFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCNYIASGSSDRSVRVWDCVSGNCVRLMTGHKTAVSTLAFSPDGRFLASGGRDSRVLFWD 547 HSP 4 Score: 51.9878 bits (123), Expect = 2.007e-7 Identity = 24/77 (31.17%), Postives = 36/77 (46.75%), Query Frame = 0 Query: 117 LSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQ 193 ++GH+ V+ + F P + S DS V WD G L H+ +V +AF G +L S D + +W FQ Sbjct: 515 MTGHKTAVSTLAFSPDGRFLASGGRDSRVLFWDIAHGHLLADLSNHSQTVTALAFSRDGNILAXSSTDFXLAMWXFQ 591 HSP 5 Score: 50.0618 bits (118), Expect = 8.601e-7 Identity = 28/100 (28.00%), Postives = 45/100 (45.00%), Query Frame = 0 Query: 324 FLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWEC 423 L S S D TI++W GH + + F P G Y SA DKT+ +W + H + FH + ++ +GS D++V++W+C Sbjct: 415 MLLSCSEDGTIRLW--------ICYRGHMYAVWHVKFSPQGYYFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCNYIASGSSDRSVRVWDC 506
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000009796 (supercontig:LSalAtl2s:LSalAtl2s638:23384:28063:-1 gene:EMLSAG00000009796 transcript:EMLSAT00000009796 description:"maker-LSalAtl2s638-augustus-gene-1.14") HSP 1 Score: 106.686 bits (265), Expect = 1.236e-25 Identity = 77/244 (31.56%), Postives = 119/244 (48.77%), Query Frame = 0 Query: 157 RTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYD--CIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEV------ATGYCVKTYKGHREWVRMVRVYGDQ-YIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLD 391 RT +GHT + I D +VS S D +I++W+ ++ + TL GH V C G+ ++S S D +IK+W++ ++ C T GH + VR V + ++ + + S DQTV++W L+T CK LR H+ V CV WA G L SGS DKTIK W V +G C+ TL GH + + + +++ S D+T+++WD +C LD Sbjct: 182 RTFEGHTGGISCIQLDRN--RIVSGSHDKTIRVWNIKTNSPWSVMTLSGHSGEVR--CLYLEGNRLVSGSADSTIKVWDLDIQSEWSSIACKVTMVGHLDKVRAVTMNRNKDLVISGSYDQTVKIWCLKTGSCKRTLRGHEGPVLCVHWA------------------------GFTLLSGSADKTIKQWSVETGECIRTLTGHGDAVTCISLET--DRIVTGSLDRTIKLWDSKTGKCVSTLD 395 HSP 2 Score: 101.293 bits (251), Expect = 8.574e-24 Identity = 72/250 (28.80%), Postives = 118/250 (47.20%), Query Frame = 0 Query: 107 WIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGD--FERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDF------QSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTL 348 W+ T GH ++ + + ++S S D T++VW+ +T TL GH+ V+ + +G LVS SAD +IK+WD S C T+ GH V +V + D +IS S D+++K+W + TG C +T +GH V V G ++ S D+T++ W+++T +C L H V C++ + + +GS D+TIK+WD +G C+ TL Sbjct: 174 WLSGQCHVRTFEGHTGGISCIQLDR--NRIVSGSHDKTIRVWNIKTNSPWSVMTLSGHSGEVRCLYL--EGNRLVSGSADSTIKVWDLDIQSEWSSIACKVTMVGHLDKVRAVTMNRNKDLVISGSYDQTVKIWCLKTGSCKRTLRGHEGPVLCVHWAGFTLLSG-SADKTIKQWSVETGECIRTLTGHGDAVTCISLETDR------------------------IVTGSLDRTIKLWDSKTGKCVSTL 394 HSP 3 Score: 94.3597 bits (233), Expect = 1.779e-21 Identity = 73/235 (31.06%), Postives = 116/235 (49.36%), Query Frame = 0 Query: 198 IKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATG--YCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKD------CKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTH--FCTSLDFHRSGPFVVTGSVDQTVKIWE 422 ++T +GH +S C + I+S S DK+I++W + T + V T GH VR + + G++ ++ S D T++VW L + CK+ + H V A+ ++D + SGS D+T+KIW + +GSC TL GH+ + L H G LLS S DKT++ W + C + L H C SL+ R +VTGS+D+T+K+W+ Sbjct: 181 VRTFEGHTGGIS--CIQLDRNRIVSGSHDKTIRVWNIKTNSPWSVMTLSGHSGEVRCLYLEGNRLVSG-SADSTIKVWDLDIQSEWSSIACKVTMVGHLDKVR-----------AVTMNRNKD-----------LVISGSYDQTVKIWCLKTGSCKRTLRGHEGPV--LCVHWAGFTLLSGSADKTIKQWSVETGECIRTLTGHGDAVTCISLETDR----IVTGSLDRTIKLWD 384
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000006156 (supercontig:LSalAtl2s:LSalAtl2s336:420428:421924:-1 gene:EMLSAG00000006156 transcript:EMLSAT00000006156 description:"augustus_masked-LSalAtl2s336-processed-gene-4.9") HSP 1 Score: 105.531 bits (262), Expect = 5.683e-25 Identity = 70/282 (24.82%), Postives = 124/282 (43.97%), Query Frame = 0 Query: 108 IPRPPEKYTLSGHRAPVTKVLFHPIFSL---------VISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQY-IATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIW 379 +P E TL GH + + ++F+P +L + S S+D +VK+W+ E+ + ++GH V A+ G+ L +C D S ++WD + + +GH V + F G ++ D ++W++ TG C+ +GH + + V D Y AT S+D ++W L+ + + + H +VV V F +L + S D T K+W + L +L GHD + P Y+ + S D+T ++W Sbjct: 233 VPDCKEIRTLRGHSSNIGSIVFNPHATLEGHSNKDPCMASCSQDGSVKLWNLESDEPIADIEGHDSRVSRCAYHPSGRFLATCVYDNSWRLWDLEQLQEVLHQEGHSKPVHCIAFQNDGSLALTGGLDSFGRIWDLRTGQCIMFLEGHLKGIIGVDWSRDGYHCATGSSDNACKIWDLRKRKIEYTIPAHTNVVSNVV------------------------FDEDYLLTASYDGTAKLWARKTWQPLASLKGHDLRLMDCAISPDRSYIATCSYDRTFKLW 490 HSP 2 Score: 98.5969 bits (244), Expect = 1.592e-22 Identity = 67/261 (25.67%), Postives = 114/261 (43.68%), Query Frame = 0 Query: 171 FDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDH---------IISCSRDKSIKMWEVATGYCVKTYKGHREWV-RMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIW 421 F + L++ S K+W I+TL+GH N+ S+ F P + SCS+D S+K+W + + + +GH V R +++ATC D + R+W L+ L H V C+A+ + G +G D +IWD+ +G C+ L GH I G+ + G + + S D +IWDL ++ + + AHT+ +++ F +++T S D T K+W Sbjct: 212 FSPNSQYLLTGSWSGLCKLWSVPDCKEIRTLRGHSSNIGSIVFNPHATLEGHSNKDPCMASCSQDGSVKLWNLESDEPIADIEGHDSRVSRCAYHPSGRFLATCVYDNSWRLWDLEQLQEVLHQEGHSKPVHCIAFQND----------------------GSLALTGGLDSFGRIWDLRTGQCIMFLEGHLKGIIGVDWSRDGYHCATGSSDNACKIWDLRKRKIEYTIPAHTNVVSNVVFDED--YLLTASYDGTAKLW 448 HSP 3 Score: 79.337 bits (194), Expect = 2.760e-16 Identity = 49/161 (30.43%), Postives = 80/161 (49.69%), Query Frame = 0 Query: 119 GHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQ-YIATCSNDQTVRVWALQTK 278 GH PV + F SL ++ DS ++WD TG L+GH + + + G + S+D + KIWD + T+ H + VS+V F D++++ S D + K+W T + + KGH + + D+ YIATCS D+T ++W+ K Sbjct: 337 GHSKPVHCIAFQNDGSLALTGGLDSFGRIWDLRTGQCIMFLEGHLKGIIGVDWSRDGYHCATGSSDNACKIWDLRKRKIEYTIPAHTNVVSNVVF--DEDYLLTASYDGTAKLWARKTWQPLASLKGHDLRLMDCAISPDRSYIATCSYDRTFKLWSXDIK 495 HSP 4 Score: 68.9366 bits (167), Expect = 6.827e-13 Identity = 42/168 (25.00%), Postives = 77/168 (45.83%), Query Frame = 0 Query: 259 QYIATCSNDQTVRVWALQTKDCK--LELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 QY+ T S ++W++ DCK LR H + + + P + +G P +AS S+D ++K+W++ S + + GHD+ + +HP G++L + D + R+WDL + + H+ + F G +TG +D +IW+ R Sbjct: 217 QYLLTGSWSGLCKLWSV--PDCKEIRTLRGHSSNIGSIVFNPHATL-------------EGHSNKDPCMASCSQDGSVKLWNLESDEPIADIEGHDSRVSRCAYHPSGRFLATCVYDNSWRLWDLEQLQEVLHQEGHSKPVHCIAFQNDGSLALTGGLDSFGRIWDLR 369
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Match: EMLSAG00000011537 (supercontig:LSalAtl2s:LSalAtl2s799:381305:384324:1 gene:EMLSAG00000011537 transcript:EMLSAT00000011537 description:"maker-LSalAtl2s799-snap-gene-3.77") HSP 1 Score: 103.605 bits (257), Expect = 2.262e-24 Identity = 70/257 (27.24%), Postives = 122/257 (47.47%), Query Frame = 0 Query: 124 VTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVR-VYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIW 379 VT + ++ SL+ + S D ++W TG E+TL H + + ++ G ++S D + IWD Q+ + + H V + + + SCS DK I + ++ +K++ GH V ++ +++A+CS+D T++VW + + +L+ H + + W+ P N ++ LAS S D T+++WDV GSCL L H + + F P GK+L S S DK + IW Sbjct: 195 VTSLDWNSSGSLLATGSYDGFARIWS-TTGKLEKTLGQHKGPIFALKWNKSGNYILSAGVDRTTIIWDSQTGNHKQQFAFHSAPALDVDW-QTDESFASCSTDKCIHVCKLGVEKPIKSFYGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKESHVHDLQAHSKEIYTIKWS--CTGPGTNNPNAD-----------LVLASASFDSTVRLWDVERGSCLHXLXRHKEPVYSVAFSPDGKFLASGSFDKCVHIW 436 HSP 2 Score: 100.138 bits (248), Expect = 3.405e-23 Identity = 89/335 (26.57%), Postives = 138/335 (41.19%), Query Frame = 0 Query: 108 IPRPPEKYT-LSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGH-----------TDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFH---PGGK------YLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIW 421 I P EK + L GH + V ++P+ L+ S S DST ++W E + H V + ++ G LL + S D +IW + KTL H + ++ + SG++I+S D++ +W+ TG + + H V D+ A+CS D+ + V L + H + V + W P+ G FLAS S D T+K+W + S + L H I + + PG L SAS D T+R+WD+ C L H S+ F G F+ +GS D+ V IW Sbjct: 125 IEIPAEKASVLKGHDSEVFICAWNPMQDLLASGSGDSTARIWHMEDSQQREIILKHCIHRGGQEVPSNKDVTSLDWNSSGSLLATGSYDGFARIWS-TTGKLEKTLGQHKGPIFALKWNKSGNYILSAGVDRTTIIWDSQTGNHKQQFAFHSAPALDVDWQTDESFASCSTDKCIHVCKLGVEKPIKSFYGHTNEVNAIKWDPQ----------------------GKFLASCSDDMTLKVWCMDKESHVHDLQAHSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWDVERGSCLHXLXRHKEPVYSVAFSPDGKFLASGSFDKCVHIW 436 HSP 3 Score: 91.6633 bits (226), Expect = 2.309e-20 Identity = 68/276 (24.64%), Postives = 123/276 (44.57%), Query Frame = 0 Query: 116 TLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVR----------VYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDL 381 TL H+ P+ + ++ + ++SA D T +WD +TG+ ++ H+ D+ + + SCS D I + IK+ GH + V+++ + P G + SCS D ++K+W + V + H + + ++ D +A+ S D TVR+W ++ C L H V VA++P+ G FLASGS DK + IW +G + + G I + ++ G + +++ D T+ + DL Sbjct: 228 TLGQHKGPIFALKWNKSGNYILSAGVDRTTIIWDSQTGNHKQQFAFHSAPALDVDWQTD-ESFASCSTDKCIHVCKLGVEKPIKSFYGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKESHVHDLQAHSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWDVERGSCLHXLXRHKEPVYSVAFSPD----------------------GKFLASGSFDKCVHIWSTVTGKLVHSYKGTGG-IFEVCWNSRGDKVGASASDGTVFVLDL 479 HSP 4 Score: 68.1662 bits (165), Expect = 1.155e-12 Identity = 67/285 (23.51%), Postives = 116/285 (40.70%), Query Frame = 0 Query: 159 LKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGH-----------DHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVR-VYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGP---------FVVTGSVDQTVKIWE 422 LKGH V A++ LL S S D + +IW + + + H + +V+S+ + SG + + S D ++W TG KT H+ + ++ YI + D+T +W QT + K + H V W + + AS S DK I + + + + GH N + + + P GK+L S SDD TL++W + + L AH+ ++ + +GP + + S D TV++W+ Sbjct: 135 LKGHDSEVFICAWNPMQDLLASGSGDSTARIWHMEDSQQREIILKHCIHRGGQEVPSNKDVTSLDWNSSGSLLATGSYDGFARIWST-TGKLEKTLGQHKGPIFALKWNKSGNYILSAGVDRTTIIWDSQTGNHKQQFAFHSAPALDVDWQTDES-----------------------FASCSTDKCIHVCKLGVEKPIKSFYGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKESHVHDLQAHSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWD 395
BLAST of lissencephaly-1-like protein vs. SwissProt
Match: gi|82248139|sp|Q9PTR5.3|LIS1_CHICK (RecName: Full=Lissencephaly-1 homolog) HSP 1 Score: 626.32 bits (1614), Expect = 0.000e+0 Identity = 287/412 (69.66%), Postives = 350/412 (84.95%), Query Frame = 0 Query: 16 MVLSQRQREELNKAIAEYMQSNGYTDALENFKRET--DMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MVLSQRQR+ELN+AIA+Y++SNGY +A FK+E D+ ++DKK+AGLLEKKWTSVIRLQKKV ELE+KL EA++EF SG P +KR P EWIPRPPEKY LSGHR+PVT+V+FHP+FS+++SASED+T+KVWD+ETGDFERTLKGHTDSVQDI+FD GKLL SCSADM+IK+WDFQ ++CI+T+ GHDHNVSSV +P+GDHI+S SRDK+IKMWEV TGYCVKT+ GHREWVRMVR D IA+CSNDQTVRVW + TK+CK ELREH+HVVEC++WAPES+ I+EA + K G GPFL SGSRDKTIK+WD+++G CL TLVGHDNW+RG++FH GGK++LS +DDKTLR+WD +KRC K L+AH HF TSLDFH++ P+VVTGSVDQTVK+WECR Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKP--GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
BLAST of lissencephaly-1-like protein vs. SwissProt
Match: gi|82253513|sp|Q4RJN5.1|LIS1_TETNG (RecName: Full=Lissencephaly-1 homolog) HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0 Identity = 287/412 (69.66%), Postives = 352/412 (85.44%), Query Frame = 0 Query: 16 MVLSQRQREELNKAIAEYMQSNGYTDALENFKRETDMPGD--IDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MVLSQRQR+ELN+AIA+Y++SNGY +A FK+E ++ + +DKK+AGLLEKKWTSVIRLQKKV ELE+KL EA++E G P +KR P EWIPRPPE+Y LSGHR+PVT+V+FHP+FS+++SASED+T+KVWD+ETGDFERTLKGHTDSVQDI+FD GKLL SCSADM+IK+WDFQS++CI+T+ GHDHNVSSV +P+GDHIIS SRDK++KMWEVATGYCVKT+ GHREWVRMVR D IA+CSNDQTVRVW + +K+CK ELREH+HVVEC++WAPESA P I +A S ++K G GPFL SGSRDKTIK+WDV++G CL TLVGHDNW+RG++FHPGGK++++ +DDKTLRIWD +KRC K L AH HF TSLDFH++ P+VVTGSVDQTVK+WECR Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILDATSSESKKSGKP--GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGKFIVTCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR 410
BLAST of lissencephaly-1-like protein vs. SwissProt
Match: gi|82237363|sp|Q6NZH4.3|LIS1_XENTR (RecName: Full=Lissencephaly-1 homolog) HSP 1 Score: 624.78 bits (1610), Expect = 0.000e+0 Identity = 287/412 (69.66%), Postives = 349/412 (84.71%), Query Frame = 0 Query: 16 MVLSQRQREELNKAIAEYMQSNGYTDALENFKRET--DMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MVLSQRQR+ELN+AIA+Y++SNGY +A FK+E DM ++DKK+AGLLEKKWTSVIRLQKKV ELE+KL EA++EF SG P +KR P EWIPRPPEKY LSGHR+PVT+V+FHP+FS++++ASED+T+KVWD+ETGDFERTLKGHTDSVQDI+FD GKLL SCSADM+IK+WDFQ ++CI+T+ GHDHNVSSV +P+GDHI+S SRDK+IKMWEV TGYCVKT+ GHREWVRMVR D IA+CSNDQTVRVW + TK+CK ELREH+HVVEC++WAPES+ I++A + K G GPFL SGSRDKTIK+WD++ G CL TLVGHDNW+RG+ FHPGGK++LS +DDKT+RIWD +KRC K L+AH HF TSLDFH++ P+VVTGSVDQTVK+WECR Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKP--GPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
BLAST of lissencephaly-1-like protein vs. SwissProt
Match: gi|82240514|sp|Q7T394.3|LIS1A_DANRE (RecName: Full=Lissencephaly-1 homolog A; AltName: Full=Platelet-activating factor acetylhydrolase IB subunit alpha a) HSP 1 Score: 621.698 bits (1602), Expect = 0.000e+0 Identity = 290/412 (70.39%), Postives = 345/412 (83.74%), Query Frame = 0 Query: 16 MVLSQRQREELNKAIAEYMQSNGYTDALENFKRET--DMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MVLSQRQR+ELN+AIA+Y++SNGY +A FK+E DM ++DKK+AGLLEKKWTSVIRLQKKV ELE+KL EA++E G P +KR P EWIPRPPEKY LSGHR+PVT+V+FHP+FS+++SASED+T+KVWD ETGDFERTLKGHTDSVQDI+FD GKLL SCSADM+IK+WDFQ ++CI+T+ GHDHNVSSV +P+GDHI+S SRDK+IKMWEVATGYCVKT+ GHREWVRMVR D IA+ SNDQTVRVW + TK+CK ELREH+HVVEC++WAPESA P I EA + K G GPFL SGSRDKTIK+WDV+ G CL TLVGHDNW+RG++ HPGGKY++S +DDKTLRIWD +KRC K L AH HF TSLDFH++ P+VVTGSVDQTVK+WECR Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEINIGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKP--GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
BLAST of lissencephaly-1-like protein vs. SwissProt
Match: gi|82245568|sp|Q90ZL4.3|LIS1_XENLA (RecName: Full=Lissencephaly-1 homolog) HSP 1 Score: 620.928 bits (1600), Expect = 0.000e+0 Identity = 285/412 (69.17%), Postives = 348/412 (84.47%), Query Frame = 0 Query: 16 MVLSQRQREELNKAIAEYMQSNGYTDALENFKRET--DMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MVLSQRQR+ELN+AIA+Y++SNGY +A FK+E DM ++D K+AGLLEKKWTSVIRLQKKV ELE+KL EA++EF SG P +KR P EWIPRPPEKY LSGHR+PVT+V+FHP+FS++++ASED+T+KVWD+ETGDFERTLKGHTDSVQDI+FD GKLL SCSADM+IK+WDFQ ++C++T+ GHDHNVSSV +P+GDHI+S SRDK+IKMWEV TGYCVKT+ GHREWVRMVR D IA+CSNDQTVRVW + TK+CK ELREH+HVVEC++WAPES+ I++A + K G GPFL SGSRDKTIK+WD++ G CL TLVGHDNW+RG+ FHPGGK++LS +DDKT+RIWD +KRC K L+AH HF TSLDFH++ P+VVTGSVDQTVK+WECR Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDIKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKP--GPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
BLAST of lissencephaly-1-like protein vs. nr
Match: gi|861651349|gb|KMQ97734.1| (lissencephaly-1-like protein [Lasius niger]) HSP 1 Score: 660.218 bits (1702), Expect = 0.000e+0 Identity = 304/413 (73.61%), Postives = 360/413 (87.17%), Query Frame = 0 Query: 14 MKMVLSQRQREELNKAIAEYMQSNGYTDALENFKRETDMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDF-QSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYG-DQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MKMVLSQRQREELNKAIA+Y+ +NGY DALE FK+E DMPG++++K+ GLLEKKWTSVIRLQKKV ELE+KL+EAEKEFI GAPTR KR+P EWIPRPPEK++L+GHRAP+ +V+FHP+FSLV+SASED+T+KVWDFE+GDFERTLKGHTDSVQDIAFD GKLL SCSADMSIK+WDF QS+ C+KT+ GHDHNV+SV FVP GD ++S SRDK+IK+WEVATGYCVKT GHREWVRM RV + IA+CSNDQTVRVW + TK+ K+E REH+HVVEC+AWAPESA +IN AA DNK G GPFLASGSRDKTI++WDV +G CLFTL+GHDNW+R +VFHPGGK+++SASDDKTLR+WD +KR K L+AH HFCTS+DFH++ P+VVTGSVDQTVKIWECR Sbjct: 1 MKMVLSQRQREELNKAIADYLSTNGYQDALEAFKKEADMPGEVERKYGGLLEKKWTSVIRLQKKVMELESKLSEAEKEFIEGAPTRGKRSPSEWIPRPPEKFSLTGHRAPINRVIFHPVFSLVVSASEDATIKVWDFESGDFERTLKGHTDSVQDIAFDASGKLLASCSADMSIKLWDFHQSFACVKTMHGHDHNVNSVAFVPQGDFVVSASRDKTIKIWEVATGYCVKTLTGHREWVRMARVSPCGELIASCSNDQTVRVWHVATKETKVEFREHEHVVECIAWAPESARASINAAAGADNK---GAHEGPFLASGSRDKTIRVWDVAAGVCLFTLIGHDNWVRCIVFHPGGKFIVSASDDKTLRVWDTRNKRVMKTLEAHVHFCTSVDFHKNHPYVVTGSVDQTVKIWECR 410
BLAST of lissencephaly-1-like protein vs. nr
Match: gi|1101363598|ref|XP_018907507.1| (PREDICTED: lissencephaly-1 homolog [Bemisia tabaci] >gi|1101363600|ref|XP_018907508.1| PREDICTED: lissencephaly-1 homolog [Bemisia tabaci]) HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0 Identity = 302/413 (73.12%), Postives = 362/413 (87.65%), Query Frame = 0 Query: 14 MKMVLSQRQREELNKAIAEYMQSNGYTDALENFKRETDMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDF-QSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MKMVLSQRQ+EELNKAIA+Y+ SNGYT ALE KR+ D+ G+++KK+ GLLEKKWTSVIRLQKKV ELE+KL+EAEKEFI GAPTR KR+P EWIPR PEK+ LSGHRAPVTKV+FHP+F L++SASED++++VWD+ETG++ER+LKGHTDS+QDIAFD GK+LVSCSADMSIKIWDF Q Y CIKT+ GHDHNVS V F+P+GD I+S SRDK+IK+WEVATGYCVKT+ GHREWVR V+V D YIA+CSND TVRVW TK+CK+ELR+H+HVVEC+AWA ESA AINEAA DNK G F GPFL SGSRDKT+++WDV+SG CLFTL+GHDNW+RG+VFHPGGKY++SASDDKTLR+WD+ +KR K LDAH+HFCTSLDFHR+ P+V+TGSVD+T+K+WECR Sbjct: 1 MKMVLSQRQKEELNKAIADYLSSNGYTTALEGLKRDADISGEVEKKYGGLLEKKWTSVIRLQKKVMELESKLSEAEKEFIEGAPTRAKRSPTEWIPRGPEKFCLSGHRAPVTKVIFHPVFGLIVSASEDASIRVWDYETGEYERSLKGHTDSIQDIAFDHTGKILVSCSADMSIKIWDFTQGYQCIKTMHGHDHNVSGVAFMPNGDFIVSASRDKTIKIWEVATGYCVKTFSGHREWVRQVKVSPDGSYIASCSNDHTVRVWVAATKECKVELRDHEHVVECIAWANESANSAINEAAGGDNKK--GAFEGPFLVSGSRDKTLRVWDVSSGLCLFTLIGHDNWVRGVVFHPGGKYIISASDDKTLRVWDIRNKRNMKTLDAHSHFCTSLDFHRTQPYVITGSVDKTIKVWECR 411
BLAST of lissencephaly-1-like protein vs. nr
Match: gi|752859820|ref|XP_011267715.1| (PREDICTED: lissencephaly-1 homolog [Camponotus floridanus]) HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0 Identity = 303/413 (73.37%), Postives = 360/413 (87.17%), Query Frame = 0 Query: 14 MKMVLSQRQREELNKAIAEYMQSNGYTDALENFKRETDMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDF-QSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYG-DQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MKMVLSQRQREELNKAIA+Y+ +NGY DALE FK+E DMPG++++K+ GLLEKKWTSVIRLQKKV ELE+KL+EAEKEFI GAPTR KR+P EWIPRPPEK++L+GHRAP+ +V+FHP+FSL++SASED+T+KVWDFE+GDFERTLKGHTDSVQDIAFD GKLL SCSADMSIK+WDF QS+ C+KT+ GHDHNV+SV FVP GD ++S SRDK+IK+WEVATGYCVKT GHREWVRM RV + IA+CSNDQTVRVW + TK+ K+E REH+HVVEC+AWAPESA +IN AA DNK G GPFLASGSRDKTI++WDV +G CLFTL+GHDNW+R +VFHPGGK+++SASDDKTLR+WD +KR K L+AH HFCTS+DFH++ P+VVTGSVDQTVKIWECR Sbjct: 1 MKMVLSQRQREELNKAIADYLSTNGYQDALEAFKKEADMPGEVERKYGGLLEKKWTSVIRLQKKVMELESKLSEAEKEFIEGAPTRGKRSPSEWIPRPPEKFSLTGHRAPINRVIFHPVFSLIVSASEDATIKVWDFESGDFERTLKGHTDSVQDIAFDASGKLLASCSADMSIKLWDFHQSFACVKTMHGHDHNVNSVAFVPQGDFVVSASRDKTIKIWEVATGYCVKTLTGHREWVRMARVSPCGELIASCSNDQTVRVWHVATKETKVEFREHEHVVECIAWAPESARASINAAAGADNK---GAHEGPFLASGSRDKTIRVWDVAAGVCLFTLIGHDNWVRCIVFHPGGKFIVSASDDKTLRVWDTRNKRVMKTLEAHVHFCTSVDFHKNHPYVVTGSVDQTVKIWECR 410
BLAST of lissencephaly-1-like protein vs. nr
Match: gi|1022761704|gb|KZS07625.1| (Lissencephaly-1 [Daphnia magna]) HSP 1 Score: 659.062 bits (1699), Expect = 0.000e+0 Identity = 304/423 (71.87%), Postives = 362/423 (85.58%), Query Frame = 0 Query: 14 MKMVLSQRQREELNKAIAEYMQSNGYTDALENFKRETDMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYGD-QYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAA-----------SEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 M+MVLSQRQ+EELN+AIA+Y+ S+G+ D+LE FKRE D+ GD+DKK+ GLLEKKWTSV+RLQK+V ELEAKLAEAEKEFI+GAPTREKR+P EWIPR PEKY LSGHRAPVTKV+FHP+FS+ +SASED+T+K+WDFETGDFERTLKGHTDSVQD+ FD GK+L SCSADMS+K+WDF +++C KTLQGHDHNVSSV F+P+GD ++S SRDK+IK+WEVATGYCVKT GHREWVR +RV D +A+CSNDQTVR+W L +K+CK+E+REH+HVVECVAWAPESAT AI EA +E++K GPFLASGSRDKTIKIWDV++G C+ TL GHDNW+RGLVFH GGKYLLSA+DDKTLR+WDL H+RC K L+AH HFCTSLD HR+ P+VVTGSVDQTVK+WECR Sbjct: 1 MRMVLSQRQKEELNRAIADYLLSSGHVDSLEAFKREADINGDVDKKYTGLLEKKWTSVVRLQKRVMELEAKLAEAEKEFIAGAPTREKRSPTEWIPRAPEKYILSGHRAPVTKVVFHPVFSVFVSASEDATIKLWDFETGDFERTLKGHTDSVQDVTFDSNGKMLASCSADMSVKLWDFNTFECTKTLQGHDHNVSSVTFLPTGDFLVSSSRDKTIKIWEVATGYCVKTLSGHREWVRQIRVSPDGLLLASCSNDQTVRIWLLSSKECKMEMREHEHVVECVAWAPESATAAIQEATALAASSSNSAPTENHKK--SNLTGPFLASGSRDKTIKIWDVSTGLCVLTLTGHDNWVRGLVFHTGGKYLLSAADDKTLRVWDLRHRRCLKTLEAHQHFCTSLDLHRTAPYVVTGSVDQTVKVWECR 421
BLAST of lissencephaly-1-like protein vs. nr
Match: gi|826443209|ref|XP_012530739.1| (PREDICTED: lissencephaly-1 homolog [Monomorium pharaonis]) HSP 1 Score: 659.062 bits (1699), Expect = 0.000e+0 Identity = 305/413 (73.85%), Postives = 360/413 (87.17%), Query Frame = 0 Query: 14 MKMVLSQRQREELNKAIAEYMQSNGYTDALENFKRETDMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTREKRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDFETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDF-QSYDCIKTLQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWVRMVRVYG-DQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPESATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVGHDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSLDFHRSGPFVVTGSVDQTVKIWECR 424 MKMVLSQRQREELNKAIA+Y+ +NGY DALE FK+E DMPG++++K+ GLLEKKWTSVIRLQKKV ELE+KL+EAEKEFI GAPTR KR+P EWIPRPPEK+ LSGHRAP+ +V+FHP+FSL++SASED+T+KVWDFE+GDFERTLKGHTDSVQDIAFD GKLL SCSADMSIK+WDF QS+ C+KT+ GHDHNV+SV FVP GD ++S SRDK+IK+WEVATGYCVKT GHREWVRMVRV + IA+CSNDQTVRVW + TK+ K+E REHDHVVEC+AWAPE+A +IN AA DNK G GPFLASGSRDKTI++WDV +G CLFTL+GHDNW+R +VFHPGGK+++SASDDKTLR+WD +KR K L+AH HFCTS+DFH++ P+VVTGSVDQTVKIWECR Sbjct: 1 MKMVLSQRQREELNKAIADYLSTNGYQDALEAFKKEADMPGEVERKYGGLLEKKWTSVIRLQKKVMELESKLSEAEKEFIEGAPTRGKRSPSEWIPRPPEKFCLSGHRAPINRVIFHPVFSLIVSASEDATIKVWDFESGDFERTLKGHTDSVQDIAFDTSGKLLASCSADMSIKLWDFHQSFACVKTMHGHDHNVNSVAFVPQGDFVVSASRDKTIKIWEVATGYCVKTLTGHREWVRMVRVSPCGELIASCSNDQTVRVWHIATKETKVEFREHDHVVECIAWAPENARASINAAAGADNK---GAHEGPFLASGSRDKTIRVWDVGAGVCLFTLIGHDNWVRCIVFHPGGKFIVSASDDKTLRVWDTRNKRVMKTLEAHLHFCTSVDFHKNHPYVVTGSVDQTVKIWECR 410 The following BLAST results are available for this feature:
BLAST of lissencephaly-1-like protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of lissencephaly-1-like protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of lissencephaly-1-like protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold188_size271682:187993..190711+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold188_size271682-snap-gene-1.28 ID=maker-scaffold188_size271682-snap-gene-1.28|Name=lissencephaly-1-like protein|organism=Tigriopus kingsejongensis|type=gene|length=2719bp|location=Sequence derived from alignment at scaffold188_size271682:187993..190711+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'lissencephaly-1-like protein' has the following synonyms
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