cappuccino homolog, maker-scaffold188_size271682-snap-gene-1.37 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cappuccino homolog vs. SwissProt
Match: gi|33301030|sp|Q8TDM0.1|BCAS4_HUMAN (RecName: Full=Breast carcinoma-amplified sequence 4) HSP 1 Score: 56.6102 bits (135), Expect = 5.414e-9 Identity = 36/131 (27.48%), Postives = 67/131 (51.15%), Query Frame = 0 Query: 23 DPETAEPSREALDRFTRDLAHYAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEGSGIRTYMPKFFGAAGRP 153 D + EP R R+LA + + ++A + E + + +RL+EF L DL ++DTS L N+P + K M ++ ++DRLE V V ++ ++ + +AE+ + + ++ G+AG P Sbjct: 35 DADQPEPMRSG----ARELALFLTPEPGAEAKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPVLKAKLTEMRGIYAKVDRLEAFVKMVGHHVAFLEADVLQAER--DHGAFPQALRRWLGSAGLP 159
BLAST of cappuccino homolog vs. SwissProt
Match: gi|34395560|sp|Q9NUP1.1|BL1S4_HUMAN (RecName: Full=Biogenesis of lysosome-related organelles complex 1 subunit 4; Short=BLOC-1 subunit 4; AltName: Full=Protein cappuccino homolog) HSP 1 Score: 53.5286 bits (127), Expect = 7.541e-8 Identity = 46/167 (27.54%), Postives = 75/167 (44.91%), Query Frame = 0 Query: 25 ETAEPSREALDRFTRDLAHYAQVDWTSQASR-----LNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEGSGIRTY--------MPKFF--GAAGRPMSVVAQLTEQPEAVQVFSTSDFF 176 E P R+ L R A YA +R L+ ++ DL R+DEF +LD+ + D+S + +P++ K M ++ +IDRLE V V + M++ +++AE + G+ R + +P F A RP EA +F T D+F Sbjct: 50 EDGAPGRD-LPLLRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPRIHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAEL-GTFPRAFKKLLHTMNVPSLFSKSAPSRPQQAGY------EAPVLFRTEDYF 208
BLAST of cappuccino homolog vs. nr
Match: gi|1009546572|ref|XP_015909232.1| (biogenesis of lysosome-related organelles complex 1 subunit 4-like [Parasteatoda tepidariorum]) HSP 1 Score: 98.2117 bits (243), Expect = 1.737e-22 Identity = 51/151 (33.77%), Postives = 88/151 (58.28%), Query Frame = 0 Query: 36 RFTRDLAHYAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEGSGIRTYMPKFFGAAGRPMSVVAQLTEQP------EAVQVFSTSDFFSKKT 180 + T D + Y QV+ S+ + LN+ + D+ RLDEF L+D+ + D + CL + +P++ +KYE ME F +IDRLE M+ VK+N+D +++ ++ AE+ +E S ++ K F +P+ ++ T +P E ++F FFS T Sbjct: 31 QLTEDYSKYLQVNAASEKAVLNDEVEDILTRLDEFTSLVDMVRGDNALCLNQTLPEIYKKYEEMETTFHKIDRLEEMLKVVKQNLDVLEEKVNVAEEQLESSSVK----KLFNTLQKPL--FSKKTNEPKKNIKYEPPEIFKAEVFFSDST 175
BLAST of cappuccino homolog vs. nr
Match: gi|675364507|gb|KFM57409.1| (Protein cappuccino-like protein, partial [Stegodyphus mimosarum]) HSP 1 Score: 97.4413 bits (241), Expect = 2.308e-22 Identity = 47/125 (37.60%), Postives = 78/125 (62.40%), Query Frame = 0 Query: 34 LDRFTRDLAH----YAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEGSGIRTYMPKFFGAAGRPM 154 LD +LAH Y +VD T++ + L +A+ D+ RLDEF L+D+ + D++ CL +P + +KYE ME +F +IDRLE MV VK N+D M++ ++ AE+ ++ S ++ K F + +P+ Sbjct: 25 LDNLVTNLAHDYSKYLKVDVTAEKAVLEDAIEDVLTRLDEFTSLVDMVRDDSTLCLNSTLPAIHKKYEEMEKIFQRIDRLEEMVNAVKHNLDVMEEKVTEAEEQLDTSSVK----KLFNSLQKPL 145
BLAST of cappuccino homolog vs. nr
Match: gi|1355992728|gb|PRD33901.1| (Biogenesis of lysosome-related organelles complex 1 subunit 4 [Nephila clavipes]) HSP 1 Score: 89.7373 bits (221), Expect = 1.871e-19 Identity = 45/128 (35.16%), Postives = 75/128 (58.59%), Query Frame = 0 Query: 31 REALDRFTRDLAH----YAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEGSGIRTYMPKFFGAAGRPM 154 R LD DLA Y +VD S+ + L + + D+ RLDEF L+D+ + D + CL + +P++ +K ME +F QIDRLE MV +K+N+D M++ ++ AE+ ++ S ++ K F +P+ Sbjct: 35 RAKLDNLVTDLAQEYSKYLKVDIASEKTVLEDEVEDVLTRLDEFTSLVDMVRGDNALCLNQTLPEIHKKCAEMEKIFVQIDRLEDMVKTIKQNLDVMEEKVNEAEEHLDSSSVK----KLFNTLQKPL 158
BLAST of cappuccino homolog vs. nr
Match: gi|919016518|ref|XP_013392628.1| (biogenesis of lysosome-related organelles complex 1 subunit 4 [Lingula anatina]) HSP 1 Score: 89.7373 bits (221), Expect = 7.450e-19 Identity = 52/162 (32.10%), Postives = 92/162 (56.79%), Query Frame = 0 Query: 21 RNDPETAEPS-REALDRFTRDLAHYAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEG-SGIRTYMPKF----FGAAGRPMSVVAQLTEQPEAVQVFSTSDFF 176 N+ T P+ E LD F +D A Y QVD + + + E++ D+ RLDEF L+DL ++D++ CL +PK+ K ME +F++ID+LE V+ VK+N+++ ++ +S+AE + S + + F F ++ +P + V E ++V ++FF Sbjct: 14 NNEEATRSPALDEMLDEFGKDYASYLQVDSSREKHQFEESVEDMLTRLDEFCGLVDLIRSDSTLCLKTTLPKIQAKSAEMEKMFERIDKLESFVSLVKQNLNATEEQVSKAEDELGSFSSFKKMLNSFSVPSFLSSKKPSTPVKAAKETYSPLEVIDCNNFF 175
BLAST of cappuccino homolog vs. nr
Match: gi|225710530|gb|ACO11111.1| (cappuccino homolog [Caligus rogercresseyi]) HSP 1 Score: 83.1889 bits (204), Expect = 8.196e-17 Identity = 48/130 (36.92%), Postives = 80/130 (61.54%), Query Frame = 0 Query: 51 SQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEGSGIRTYMPKF----FGAAGRPMSVVAQLTEQPEAVQVFSTSDFF 176 SQ + + + DL I++ EF+ L+DL +++++ +N + KY+ +E VF++IDRLE+MV+ V+E++ DK L++AE T+EG G+R+++P F F P A E P ++FST DFF Sbjct: 43 SQFHAIEDGIDDLEIKITEFERLMDLMESESNLYFQQNFSDMRNKYKELEKVFERIDRLEMMVSIVREDLQRTDKQLTQAESTMEG-GLRSFVPAFISSKFPLQESPDPQEANYDEPP---KLFSTEDFF 168
BLAST of cappuccino homolog vs. nr
Match: gi|1205906794|gb|OWF53542.1| (Biogenesis of lysosome-related organelles complex 1 subunit 4 [Mizuhopecten yessoensis]) HSP 1 Score: 83.1889 bits (204), Expect = 1.830e-16 Identity = 46/171 (26.90%), Postives = 92/171 (53.80%), Query Frame = 0 Query: 15 DRGLKARNDPETAEPSREA----LDRFTRDLAHYAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEG-SGIRTYMPKFFGAAGRPMSVVAQLTEQPEAVQVFSTSDFFSKKT 180 D +K + E + +E L+ ++D + Y ++D + + ++ E + D+ +LDEF L+D+ ++D++ CL +PK+ K ++ +FD+IDRLE V+ V+EN M++ ++RAE + SG++ + F L+ P Q+F T ++F +++ Sbjct: 4 DETMKENEETEKGDQEKEEAVDMLESLSKDYSTYLEIDASKEKNKFGETIEDMLTKLDEFGSLVDMIRSDSTLCLTSTLPKIQRKQAEIQDMFDKIDRLEAFVSVVRENTAMMEECVNRAEDEMGSFSGLKKMLSSFVSPKRSQTKDNQTLSFTP--PQIFKTEEYFPRQS 172
BLAST of cappuccino homolog vs. nr
Match: gi|1207916543|ref|XP_021347066.1| (biogenesis of lysosome-related organelles complex 1 subunit 4-like [Mizuhopecten yessoensis]) HSP 1 Score: 82.8037 bits (203), Expect = 2.246e-16 Identity = 46/171 (26.90%), Postives = 92/171 (53.80%), Query Frame = 0 Query: 15 DRGLKARNDPETAEPSREA----LDRFTRDLAHYAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEG-SGIRTYMPKFFGAAGRPMSVVAQLTEQPEAVQVFSTSDFFSKKT 180 D +K + E + +E L+ ++D + Y ++D + + ++ E + D+ +LDEF L+D+ ++D++ CL +PK+ K ++ +FD+IDRLE V+ V+EN M++ ++RAE + SG++ + F L+ P Q+F T ++F +++ Sbjct: 12 DETMKENEETEKGDQEKEEAVDMLESLSKDYSTYLEIDASKEKNKFGETIEDMLTKLDEFGSLVDMIRSDSTLCLTSTLPKIQRKQAEIQDMFDKIDRLEAFVSVVRENTAMMEECVNRAEDEMGSFSGLKKMLSSFVSPKRSQTKDNQTLSFTP--PQIFKTEEYFPRQS 180
BLAST of cappuccino homolog vs. nr
Match: gi|957839862|ref|XP_014670213.1| (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 4-like [Priapulus caudatus]) HSP 1 Score: 82.8037 bits (203), Expect = 3.901e-16 Identity = 46/150 (30.67%), Postives = 82/150 (54.67%), Query Frame = 0 Query: 41 LAHYAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAE---------QTVEGSGIRTYMPKFFGAAGRPMSVVAQLTEQPEAVQVFSTSDFFSKKTD 181 L QVD T++ +RL++ + ++ RL+EF LLD+ +AD++ CL MP++ K ME VF +D+LE VA V+ N+ +++++ +AE + V S + +++ + AG + Q + A VFST +F K ++ Sbjct: 39 LQRCVQVDCTTEKARLDDTVDEMLTRLEEFSSLLDIVRADSALCLEETMPRILAKRREMEQVFASVDQLEAFVATVRLNLQQLEEAVEKAESERSSLGSIKKVLSSTLPSFLSRIPSGAGAASTTRVQRARRYVAPPVFSTDSYFQKDSE 188
BLAST of cappuccino homolog vs. nr
Match: gi|1270077066|ref|XP_022801646.1| (biogenesis of lysosome-related organelles complex 1 subunit 4-like [Stylophora pistillata] >gi|1263122087|gb|PFX18611.1| Biogenesis of lysosome-related organelles complex 1 subunit 4 [Stylophora pistillata]) HSP 1 Score: 81.2629 bits (199), Expect = 1.091e-15 Identity = 53/177 (29.94%), Postives = 94/177 (53.11%), Query Frame = 0 Query: 13 MSDRGLKARNDPETAEPSREA-LDRFTRDLAHYAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEGSGIRTYMPKFFGAAGRPMSVVAQLTEQP----------EAVQVFSTSDFFSK 178 M+D +A ++ ET E E L++ + A Y QVD +++ + + + D+ +RLDEF HL D + D+S L +P++ E+ + + +F +ID+LE V VK+N+D M++S+S AE+ + I+ + G + Q+T+ P +A VF T+DF + Sbjct: 1 MADSEGQAFSETETKEDEVELDLEKCAAEFAEYCQVDVKNESKVMEDTIEDMLVRLDEFSHLADSIRNDSSQSLIEIIPQLHERSQELPTIFRKIDQLEAFVNAVKKNVDEMEESVSTAERELGSHKIQKVLKSIPG--------LRQMTQGPTKQDKNFSDWKAPAVFKTTDFLGQ 169
BLAST of cappuccino homolog vs. nr
Match: gi|961106528|ref|XP_014777351.1| (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 4-like [Octopus bimaculoides] >gi|918310946|gb|KOF81505.1| hypothetical protein OCBIM_22026412mg [Octopus bimaculoides]) HSP 1 Score: 79.7221 bits (195), Expect = 1.894e-15 Identity = 45/153 (29.41%), Postives = 84/153 (54.90%), Query Frame = 0 Query: 29 PSREALDRFTRDLAHYAQVDWTSQASRLNEAMGDLFIRLDEFQHLLDLSQADTSTCLFRNMPKVAEKYEAMEPVFDQIDRLEIMVAKVKENMDSMDKSLSRAEQTVEG-SGIRTYMPKFFGAAGRPMSVVAQLTEQPEAVQVFSTSDFFSKKT 180 PS ++ D Y +VD + + + E++ ++ +LDEF L+D+ + DT+ CL++ MP++ K M+ +F +ID+LE +V V +N+ M++ ++ AE + SGI+ + +Q EQ ++F+TSDFF K++ Sbjct: 30 PSTVFTEQLISDYVEYLKVDCSLEKTHFAESIEEMLTKLDEFCGLVDMIRGDTTLCLYKTMPEIEVKASEMQRLFVKIDQLEELVTIVSKNVSLMEEQVNNAEAKMGSFSGIKKMITSLVSPKHSATRNKSQ--EQYHPPEIFNTSDFFPKQS 180 The following BLAST results are available for this feature:
BLAST of cappuccino homolog vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of cappuccino homolog vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of cappuccino homolog vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold188_size271682:193921..196498- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold188_size271682-snap-gene-1.37 ID=maker-scaffold188_size271682-snap-gene-1.37|Name=cappuccino homolog|organism=Tigriopus kingsejongensis|type=gene|length=2578bp|location=Sequence derived from alignment at scaffold188_size271682:193921..196498- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cappuccino homolog' has the following synonyms
Add to Basket
|