bacterial regulatory helix-turn-helix family protein, maker-scaffold1892_size25411-snap-gene-0.5 (gene) Tigriopus kingsejongensis

Overview
Namebacterial regulatory helix-turn-helix family protein
Unique Namemaker-scaffold1892_size25411-snap-gene-0.5
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
The following BLAST results are available for this feature:
BLAST of bacterial regulatory helix-turn-helix family protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of bacterial regulatory helix-turn-helix family protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of bacterial regulatory helix-turn-helix family protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1892_size25411supercontigscaffold1892_size25411:15747..16364 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:regulation of transcription
Note DNA-dependent
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1892_size25411-snap-gene-0.5-mRNA-1maker-scaffold1892_size25411-snap-gene-0.5-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1892_size25411:15747..16364+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1892_size25411-snap-gene-0.5 ID=maker-scaffold1892_size25411-snap-gene-0.5|Name=bacterial regulatory helix-turn-helix family protein|organism=Tigriopus kingsejongensis|type=gene|length=618bp|location=Sequence derived from alignment at scaffold1892_size25411:15747..16364+ (Tigriopus kingsejongensis)
CCCAAACATTGATGATGATGAGCAGAACACTAACAGTTGTCAAAGTCGTG
TGCCTCACATTGTTGGCCTTAGGCTTGTGCGATGTATCCAGTGCCAGGCA
ACGTGGGCCCAACTGTGGCCTCAAGTGCTTCAGGTTAGTACAGGATTCCC
CCCTGATCTGTACTCATCAGCCGGACTCTAATTTTCCCCTCCTCCCTCCC
CCCACCCACACCCCCTGGCAGATGGAAGAAATGCATGAATCAGTTGTCAG
GCAATGAGAACCGCCCACATCAACTAGGGAACACGGGTCAGATCGTGCTC
AACACTTGCAGTGCCGGCCCTTGCGATTGCCTGGCCGAAGAGCAAAAGAA
ATTGGACGCCGCCACCACAACCACCACAGCCACACCCCCAGCCACGAGGG
AGATCGAGGCAGGGTCCCCTAGTTCCAGTCGATTCGTTCGAAAGGGTCTG
ACGAGCCGCTCACGGAACCTCAATCGACCCAAGAAGTTGGCGAGTGATTT
GCCACTCGCAACGCCCGAATTAGTCGAGGAAGAAACTGCGACAGACCCCA
CCTTGACACAGACCTTGGCCAATCGATTTCAGCCGAGTCGACGAAGACTG
TTCCGCCAAAGATATTGA
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Synonyms
The feature 'bacterial regulatory helix-turn-helix family protein' has the following synonyms
Synonym
Tk04411
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