putative uncharacterized protein, maker-scaffold18_size714446-snap-gene-2.9 (gene) Tigriopus kingsejongensis

Overview
Nameputative uncharacterized protein
Unique Namemaker-scaffold18_size714446-snap-gene-2.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of putative uncharacterized protein vs. L. salmonis genes
Match: EMLSAG00000005491 (supercontig:LSalAtl2s:LSalAtl2s2969:7294:8834:1 gene:EMLSAG00000005491 transcript:EMLSAT00000005491 description:"maker-LSalAtl2s2969-augustus-gene-0.4")

HSP 1 Score: 114.005 bits (284), Expect = 5.694e-28
Identity = 85/352 (24.15%), Postives = 173/352 (49.15%), Query Frame = 0 
Query:   84 REDQSVQNFLTQSSLEMLRSVSTQVLTDYSKNEAILEVLPNITLAKLELLLDRIPAEVSASIAAREGLLMRMSDERVVLFANNLKVLYATDSKILLQLANERPRIVPQLPNPALRHIVDRPGFVKSLKTDTIKTLVDSDAMAQKLKELPNDIIAMIVTYHPRVLTYF--PPGHYPLKPIVTQLMMNETFLAMVPIQAHAYLAQTNFRHELTA---QAVLKILGIYPSLPTRLSLKGLALNRVYL-HNQEFLTHVKCSVFLTCANDIAFVNRLGPEDIRALAQNRHMWECLPVSVIRKIMKESRLGDTLDLKEVLTAATTMS-----ALKSLDWKVVSNLARFQVPDMFKQLL 424
            +ED    NFL +S     R+V  Q   ++ +   I ++L +++  +++  + +   +     A++ G++  +  ++V + +    +L   DS++LL+   +RP ++  +P   L +   +   +K L    + ++VD   +  K   +  D I  I+   P ++ +     G  PLK  V  L+ NE FL  V    H  LA+     +  +    A+L +L ++P LPT+LS   L     +L  N+ F+  + C VF++ A +  F++ L  + + +L  N HM +CLP  ++ +I++++ +G  ++++++ T    +S       K++ WK++     FQVP + K  L
Sbjct:   94 QEDIPDFNFLKES-----RNVP-QFNLEFKEGHEIAKLLNSLSATQIKHYIQQYSLDKLIMFASKPGMIENLDPQKVKILSAQSDILTKIDSEVLLKALEKRPTLLRHVPAHILDNFGKQKNIIKGLDMGQLISIVDDVEIRNKFVNISQDAILNILNSKPMIVVHIIRVNGTNPLKTKVNDLLQNEKFLRRVLPHVHLQLAEDEIFMQFISSYPNALLNVLRVFPKLPTQLSNATLHFYSNHLLQNKTFIDSIPCPVFISGATNFTFIDGLSTKILSSLIHNSHMIDCLPEPILGQIIEKTNVGRKINVRDLYTLIRKVSYAPRLRAKNVIWKILC----FQVPKLKKYYL 435
The following BLAST results are available for this feature:
BLAST of putative uncharacterized protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000054915.694e-2824.15supercontig:LSalAtl2s:LSalAtl2s2969:7294:8834:1 ge... [more]
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BLAST of putative uncharacterized protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of putative uncharacterized protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold18_size714446supercontigscaffold18_size714446:274796..276660 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold18_size714446-snap-gene-2.9-mRNA-1maker-scaffold18_size714446-snap-gene-2.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold18_size714446:274796..276660+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold18_size714446-snap-gene-2.9 ID=maker-scaffold18_size714446-snap-gene-2.9|Name=putative uncharacterized protein|organism=Tigriopus kingsejongensis|type=gene|length=1865bp|location=Sequence derived from alignment at scaffold18_size714446:274796..276660+ (Tigriopus kingsejongensis)
AATCAAAGGACCATCAGGAGCAGACCTTTCAGCAGAATTATTTCTGAGTC
AGCCAGGCCACACCCCTCCGTCGAAAACGAGCCAGTCCTCGCTGTTTCAT
TTGACGAAGTGGGAATCCCGCGGATACCATGGTCATCCCCGGGTGGTTTC
AATTGATGGGCATCGTTATCGTTTCCCAGAACGCCGGAGCCAAATCCCCA
GACTTTCAGGTGAGCCTCAGAGATAGAGAATTTCCTTGCATTGATTATAA
CTTTCAAGGGTTGTTTTAGGATGCTTTGGACTACTACAACGATCTCGACT
ACGTGACGGATGTTGAGAATAAAACCCGTTTGGATGATGCTCGTGGACCG
GACATGGATCCAGAAGATGAGGTGTTCGACTACGAGGACTACGCTGTTAG
CACCTTTGACGTTCAGTACGAGTTGGATGATCGTCCGCGCGAAGATCAGA
GCGTGCAGAACTTCCTCACTCAATCCTCTTTGGAAATGCTGCGGAGTGTC
TCAACCCAAGTTCTCACAGACTATTCGAAGAACGAGGCCATCTTGGAAGT
GCTGCCCAATATCACTCTAGCCAAGCTTGAGCTCCTCCTTGATCGCATCC
CGGCCGAGGTGAGCGCATCCATCGCTGCGCGTGAGGGCTTGCTCATGCGC
ATGTCCGACGAGCGGGTCGTCCTATTCGCCAACAACCTCAAGGTCCTCTA
CGCCACGGATTCCAAAATATTGCTCCAGTTAGCCAATGAGCGACCTCGGA
TCGTGCCCCAGTTGCCCAACCCTGCTCTGCGACACATCGTTGACCGCCCA
GGTTTTGTCAAGTCCCTCAAGACTGATACCATCAAAACCCTCGTCGATTC
AGACGCCATGGCGCAGAAGCTCAAGGAGCTGCCCAACGATATCATTGCCA
TGATCGTCACTTACCATCCCCGTGTCCTGACCTACTTCCCTCCAGGCCAC
TATCCACTCAAGCCGATCGTAACTCAGCTGATGATGAACGAGACTTTCCT
GGCCATGGTGCCCATCCAGGCGCACGCCTACCTGGCCCAAACCAACTTCC
GACACGAGCTGACGGCCCAGGCCGTCCTCAAGATTCTGGGGATCTATCCT
TCCCTCCCGACTAGACTCAGTCTCAAAGGCTTGGCGCTGAACCGGGTCTA
CTTACACAATCAGGAGTTTCTTACGCACGTTAAGTGCTCTGTGTTTCTGA
CGTGTGCCAATGATATAGCCTTCGTCAATCGCTTGGGACCAGAGGATATC
AGGGCCCTAGCCCAGAACCGGCACATGTGGGAGTGTCTGCCGGTGAGTGT
CATTCGCAAGATCATGAAGGAAAGCCGGCTGGGAGACACGCTGGACCTTA
AGGAGGTTTTGACAGCTGCCACAACAATGTCGGCCCTGAAGAGCCTGGAT
TGGAAAGTTGTTTCCAACCTAGCCAGGTTTCAAGTGCCCGACATGTTCAA
GCAACTCCTCTTCAAGGCGTCTTAGAGCCACGGGGAGGGAAGGTCACTTT
AATATTTATATATTACGGCATCATCTTAACTTGGGCGACGATTGCTGCTT
ACAAAAGAAGTACATAGGTGCTGTGGCGGGGCTTAGCCACGATAGCAGAT
GTGGCGATGGTGTCTTGTGGTTATCAATTCTCATAAACTGTCTCTTGTTG
AATTTTTACTTTTCTTGTTGCCAGAATATCAGCATGCATGCAAATCTCAC
TCATTCTTGACTCCCAACGATCTCGAGAGAGATTGTTCATTAAAATTTGA
AATATATAGAAATGGAAATGAGCACGTTGTTTTGGGGGGATTTGGGATGG
GGGTCTTTTGTTTGTTTTTGGTTCAAGCTCTCTGGTGGCATGTGATATGT
TGCAAGTGTTCGTGG
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Synonyms
The feature 'putative uncharacterized protein' has the following synonyms
Synonym
Tk08457
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