short transient receptor potential channel 6-like isoform x1, maker-scaffold18_size714446-snap-gene-4.15 (gene) Tigriopus kingsejongensis

Overview
Nameshort transient receptor potential channel 6-like isoform x1
Unique Namemaker-scaffold18_size714446-snap-gene-4.15
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of short transient receptor potential channel 6-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000004653 (supercontig:LSalAtl2s:LSalAtl2s242:708059:728091:1 gene:EMLSAG00000004653 transcript:EMLSAT00000004653 description:"maker-LSalAtl2s242-snap-gene-7.33")

HSP 1 Score: 56.9954 bits (136), Expect = 2.980e-10
Identity = 31/103 (30.10%), Postives = 54/103 (52.43%), Query Frame = 0 
Query:   42 AVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFLSIIVLLFQLCTDRWNR-RPGKNVDNSIQDTGSNQTYATL 143
            A+ M+  Y     +VLL +LI MM+ +Y  I +  D +WK+AR+   I +FD  S +PPPF  +     + +L T  + + +  + VD+  +    N+ Y  +
Sbjct:  113 ALLMFGSYSVCNIIVLLNMLIAMMSNSYTAIAERSDTEWKFARSRLWISYFDEGSTVPPPFNIIPTAKSMKKLFTCLYCKGKQAEKVDSRQRKAADNRYYGVV 215
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000007464 (supercontig:LSalAtl2s:LSalAtl2s427:272618:406888:1 gene:EMLSAG00000007464 transcript:EMLSAT00000007464 description:"maker-LSalAtl2s427-augustus-gene-3.12")

HSP 1 Score: 50.0618 bits (118), Expect = 8.566e-8
Identity = 23/64 (35.94%), Postives = 37/64 (57.81%), Query Frame = 0 
Query:   42 AVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL 105
            A+ M+  Y     +VLL +LI MM+ +Y+ I    D +WK+AR    I +F+  + +PPPF  +
Sbjct:  577 ALLMFGSYSICNIIVLLNMLIAMMSNSYQIISAKSDVEWKFARTKLWISYFETGATVPPPFNII 640
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|18202960|sp|Q9HCX4.1|TRPC7_HUMAN (RecName: Full=Short transient receptor potential channel 7; Short=TrpC7; AltName: Full=Transient receptor protein 7; Short=TRP-7; Short=hTRP7)

HSP 1 Score: 58.5362 bits (140), Expect = 2.661e-9
Identity = 29/116 (25.00%), Postives = 59/116 (50.86%), Query Frame = 0 
Query:   37 YLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFLS------IIVLLFQLCTDRWNRRPGKNVDNSIQDTGSNQTYATLIFQ 146
            ++++    ++ VY   + VVLL +LI M+  +Y+ I +D D +WK+ARA   + +FD    LP PF  +        +++  ++C  +  +   K+ +N ++    N  +    +Q
Sbjct:  644 FIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLIMRIKMCLIKLCKSKAKSCENDLEMGMLNSKFKKTRYQ 759
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|10720320|sp|Q9QZC1.1|TRPC3_MOUSE (RecName: Full=Short transient receptor potential channel 3; Short=TrpC3; AltName: Full=Receptor-activated cation channel TRP3; AltName: Full=Transient receptor protein 3; Short=TRP-3; Short=mTrp3; AltName: Full=Trp-related protein 3)

HSP 1 Score: 58.151 bits (139), Expect = 4.104e-9
Identity = 24/69 (34.78%), Postives = 43/69 (62.32%), Query Frame = 0 
Query:   37 YLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL 105
            ++++    ++ +Y   + VVLL +LI M+  +Y+ I DD D +WK+AR+   + +FD    LPPPF+ +
Sbjct:  630 FIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLV 698
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|332278239|sp|Q13507.3|TRPC3_HUMAN (RecName: Full=Short transient receptor potential channel 3; Short=TrpC3; AltName: Full=Transient receptor protein 3; Short=TRP-3; Short=hTrp-3; Short=hTrp3)

HSP 1 Score: 58.151 bits (139), Expect = 4.143e-9
Identity = 24/69 (34.78%), Postives = 43/69 (62.32%), Query Frame = 0 
Query:   37 YLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL 105
            ++++    ++ +Y   + VVLL +LI M+  +Y+ I DD D +WK+AR+   + +FD    LPPPF+ +
Sbjct:  630 FIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLV 698
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|238054360|sp|Q9JMI9.3|TRPC3_RAT (RecName: Full=Short transient receptor potential channel 3; Short=TrpC3; AltName: Full=Trp-related protein 3)

HSP 1 Score: 58.151 bits (139), Expect = 4.263e-9
Identity = 24/69 (34.78%), Postives = 43/69 (62.32%), Query Frame = 0 
Query:   37 YLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL 105
            ++++    ++ +Y   + VVLL +LI M+  +Y+ I DD D +WK+AR+   + +FD    LPPPF+ +
Sbjct:  630 FIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLV 698
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|10720321|sp|Q9UL62.1|TRPC5_HUMAN (RecName: Full=Short transient receptor potential channel 5; Short=TrpC5; AltName: Full=Transient receptor protein 5; Short=TRP-5; Short=hTRP-5; Short=hTRP5)

HSP 1 Score: 57.7658 bits (138), Expect = 5.417e-9
Identity = 26/76 (34.21%), Postives = 41/76 (53.95%), Query Frame = 0 
Query:   30 DIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL 105
            +++A   + +     M+  Y  +  VVLL +LI MM  +Y+ I D  D +WK+AR    + +FD    LPPPF  +
Sbjct:  589 NVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNII 664
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|14548292|sp|Q9QX29.2|TRPC5_MOUSE (RecName: Full=Short transient receptor potential channel 5; Short=TrpC5; AltName: Full=Capacitative calcium entry channel 2; Short=CCE2; AltName: Full=Transient receptor protein 5; Short=TRP-5; Short=mTRP5; AltName: Full=Trp-related protein 5)

HSP 1 Score: 57.3806 bits (137), Expect = 6.369e-9
Identity = 26/76 (34.21%), Postives = 41/76 (53.95%), Query Frame = 0 
Query:   30 DIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL 105
            +++A   + +     M+  Y  +  VVLL +LI MM  +Y+ I D  D +WK+AR    + +FD    LPPPF  +
Sbjct:  589 NVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNII 664
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|14548283|sp|O62852.1|TRPC5_RABIT (RecName: Full=Short transient receptor potential channel 5; Short=Rtrp5; Short=TrpC5; AltName: Full=Capacitative calcium entry channel 2; Short=CCE2)

HSP 1 Score: 57.3806 bits (137), Expect = 6.807e-9
Identity = 26/76 (34.21%), Postives = 41/76 (53.95%), Query Frame = 0 
Query:   30 DIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL 105
            +++A   + +     M+  Y  +  VVLL +LI MM  +Y+ I D  D +WK+AR    + +FD    LPPPF  +
Sbjct:  589 NVKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNII 664
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|14548296|sp|Q9WVC5.1|TRPC7_MOUSE (RecName: Full=Short transient receptor potential channel 7; Short=TrpC7; AltName: Full=Transient receptor protein 7; Short=TRP-7; Short=mTRP7)

HSP 1 Score: 56.9954 bits (136), Expect = 1.119e-8
Identity = 27/102 (26.47%), Postives = 53/102 (51.96%), Query Frame = 0 
Query:   37 YLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFLS------IIVLLFQLCTDRWNRRPGKNVDNSIQ 132
            ++++    ++ VY   + VVLL +LI M+  +Y+ I +D D +WK+ARA   + +FD    LP PF  +        +++  ++C     +   K  +N ++
Sbjct:  644 FIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLIMRIKMCLIELCQSKAKRCENDLE 745
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|1316032203|sp|Q9MYW0.2|TRPC6_BOVIN (RecName: Full=Short transient receptor potential channel 6; Short=TrpC6)

HSP 1 Score: 53.9138 bits (128), Expect = 1.014e-7
Identity = 26/82 (31.71%), Postives = 46/82 (56.10%), Query Frame = 0 
Query:   37 YLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL----SIIVLLFQL 114
            ++++    ++ VY   + +VLL +LI M+  +++ I DD D +WK+ARA     +F+    LP PF  +    S+  LL +L
Sbjct:  699 FIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLRL 780
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Match: gi|332278126|sp|P79100.2|TRPC4_BOVIN (RecName: Full=Short transient receptor potential channel 4; Short=TrpC4; AltName: Full=Capacitative calcium entry channel 1; Short=CCE1)

HSP 1 Score: 53.9138 bits (128), Expect = 1.040e-7
Identity = 29/104 (27.88%), Postives = 49/104 (47.12%), Query Frame = 0 
Query:   28 LMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFLS--------IIVLLFQLCTDRWNRRP 123
            + +++A   + +     M+  Y  +  VVLL +LI MM  +Y+ I D  D +WK+AR    + +F+    LP PF  +         I  +   LC  +  R+P
Sbjct:  583 VTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKP 686
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|1325316212|ref|XP_023339818.1| (short transient receptor potential channel 1-like [Eurytemora affinis])

HSP 1 Score: 149.058 bits (375), Expect = 2.989e-38
Identity = 70/126 (55.56%), Postives = 91/126 (72.22%), Query Frame = 0 
Query:    1 MYNTSCILNKLDGKGGSQITHADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFLSIIVLLFQLCTDRWNRRPGKN 126
            MYNTSC+   +      +++ AD+S C++    G  +L++A VPMW +YQFLVSVVLLRILIVMMT+TY++IYD+LD+QWKYAR Y  IQFFD DSLLPPPFTFL+II+   +        + GKN
Sbjct:  862 MYNTSCMTASIAALYPGRVSKADMSQCVISRRQGAEHLETAVVPMWVIYQFLVSVVLLRILIVMMTLTYKKIYDNLDKQWKYARLYNVIQFFDQDSLLPPPFTFLTIIMYCVRGINSYRCLKKGKN 987
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|1110897646|ref|XP_019200647.1| (PREDICTED: short transient receptor potential channel 6 isoform X2 [Oreochromis niloticus])

HSP 1 Score: 71.2478 bits (173), Expect = 4.046e-11
Identity = 38/120 (31.67%), Postives = 63/120 (52.50%), Query Frame = 0 
Query:   22 ADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL----SIIVLLFQLCTDRWNRRPGKNVDNSIQDTGSN 137
            +++   ++DI   F  +++    ++ VY  ++ VVLL +LI M   +++ I DD D +WK+ARA     +FDH   LP PF  +    S+  LL  +    WN  PG++  NS  +   N
Sbjct:  563 SEVKSVVIDINHKF--IENVGYVLYGVYNIIMVVVLLNMLIAMFNSSFQEIEDDADVEWKFARAKLWFSYFDHSGTLPVPFNLVPSPKSVSCLLLSIKDFIWNVPPGRHKRNSRNEMELN 680
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|908512992|ref|XP_013129805.1| (PREDICTED: short transient receptor potential channel 6 isoform X1 [Oreochromis niloticus])

HSP 1 Score: 71.2478 bits (173), Expect = 4.090e-11
Identity = 38/120 (31.67%), Postives = 63/120 (52.50%), Query Frame = 0 
Query:   22 ADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL----SIIVLLFQLCTDRWNRRPGKNVDNSIQDTGSN 137
            +++   ++DI   F  +++    ++ VY  ++ VVLL +LI M   +++ I DD D +WK+ARA     +FDH   LP PF  +    S+  LL  +    WN  PG++  NS  +   N
Sbjct:  618 SEVKSVVIDINHKF--IENVGYVLYGVYNIIMVVVLLNMLIAMFNSSFQEIEDDADVEWKFARAKLWFSYFDHSGTLPVPFNLVPSPKSVSCLLLSIKDFIWNVPPGRHKRNSRNEMELN 735
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|930740579|ref|XP_014190418.1| (PREDICTED: short transient receptor potential channel 6 isoform X1 [Haplochromis burtoni])

HSP 1 Score: 70.0922 bits (170), Expect = 1.029e-10
Identity = 37/120 (30.83%), Postives = 62/120 (51.67%), Query Frame = 0 
Query:   22 ADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL----SIIVLLFQLCTDRWNRRPGKNVDNSIQDTGSN 137
            +++   ++DI   F  +++    ++ VY  ++ VVLL +LI M   +++ I DD D +WK+ARA     +FDH   LP PF  +    S+  LL  +    WN  PG++   S  +   N
Sbjct:  633 SEVKSVVIDINHKF--IENVGYVLYGVYNIIMVVVLLNMLIAMFNSSFQEIEDDADVEWKFARAKLWFSYFDHSGTLPVPFNLVPCPKSVSCLLLSIKDFIWNVPPGRHTKKSRNEMELN 750
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|548389079|ref|XP_005735998.1| (PREDICTED: short transient receptor potential channel 6 [Pundamilia nyererei])

HSP 1 Score: 70.0922 bits (170), Expect = 1.039e-10
Identity = 37/120 (30.83%), Postives = 62/120 (51.67%), Query Frame = 0 
Query:   22 ADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL----SIIVLLFQLCTDRWNRRPGKNVDNSIQDTGSN 137
            +++   ++DI   F  +++    ++ VY  ++ VVLL +LI M   +++ I DD D +WK+ARA     +FDH   LP PF  +    S+  LL  +    WN  PG++   S  +   N
Sbjct:  633 SEVKSVVIDINHKF--IENVGYVLYGVYNIIMVVVLLNMLIAMFNSSFQEIEDDADVEWKFARAKLWFSYFDHSGTLPVPFNLVPCPKSVSCLLLSIKDFIWNVPPGRHTKKSRNEMELN 750
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|930740581|ref|XP_014190419.1| (PREDICTED: short transient receptor potential channel 6 isoform X2 [Haplochromis burtoni])

HSP 1 Score: 69.707 bits (169), Expect = 1.140e-10
Identity = 37/120 (30.83%), Postives = 62/120 (51.67%), Query Frame = 0 
Query:   22 ADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL----SIIVLLFQLCTDRWNRRPGKNVDNSIQDTGSN 137
            +++   ++DI   F  +++    ++ VY  ++ VVLL +LI M   +++ I DD D +WK+ARA     +FDH   LP PF  +    S+  LL  +    WN  PG++   S  +   N
Sbjct:  618 SEVKSVVIDINHKF--IENVGYVLYGVYNIIMVVVLLNMLIAMFNSSFQEIEDDADVEWKFARAKLWFSYFDHSGTLPVPFNLVPCPKSVSCLLLSIKDFIWNVPPGRHTKKSRNEMELN 735
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|657744051|ref|XP_008307196.1| (PREDICTED: short transient receptor potential channel 6-like [Cynoglossus semilaevis])

HSP 1 Score: 69.3218 bits (168), Expect = 1.839e-10
Identity = 36/121 (29.75%), Postives = 66/121 (54.55%), Query Frame = 0 
Query:   22 ADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL----SIIVLLFQLCTDRWNRRPGKNVDNSIQDTGSNQ 138
            +++   +++I+  F  +++    ++ VY  ++ +VLL +LI M   +++ I DD D +WK+ARA     +F+H   LP PF  +    S++ LL+ +    W   PGKN  NS  +   N+
Sbjct:  619 SEVKSVVINIDHKF--IENTGYVLYGVYNIIMVIVLLNMLIAMFNSSFQEIQDDADVEWKFARAKLWFSYFEHSGALPVPFNLVPSPTSVVSLLWGIREFLWAVPPGKNKANSNDEMELNK 737
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|1238895579|ref|XP_013791171.2| (short transient receptor potential channel 5-like, partial [Limulus polyphemus])

HSP 1 Score: 68.9366 bits (167), Expect = 2.384e-10
Identity = 30/91 (32.97%), Postives = 50/91 (54.95%), Query Frame = 0 
Query:   15 GGSQITHADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL 105
            G ++ T ADI        A   + +     +W  Y  ++ ++LL +LI MM  +++RI ++ D +WK+AR+   + FFDH S +PPP   L
Sbjct:  559 GNAESTAADIVISGNHTSANHSFTEGVGYILWGFYHVIIVIILLNMLIAMMANSFQRIQNNSDMEWKFARSALWLNFFDHRSYVPPPLNLL 649
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|499019572|ref|XP_004560572.1| (short transient receptor potential channel 6 isoform X1 [Maylandia zebra])

HSP 1 Score: 68.1662 bits (165), Expect = 3.931e-10
Identity = 36/120 (30.00%), Postives = 62/120 (51.67%), Query Frame = 0 
Query:   22 ADISGCLMDIEAGFGYLKSAAVPMWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFL----SIIVLLFQLCTDRWNRRPGKNVDNSIQDTGSN 137
            +++   ++DI   F  +++    ++ VY  ++ VVLL +LI M   +++ I DD D +WK+ARA     +F+H   LP PF  +    S+  LL  +    WN  PG++   S  +   N
Sbjct:  633 SEVKSVVIDINHKF--IENVGYVLYGVYNIIMVVVLLNMLIAMFNSSFQEIEDDADVEWKFARAKLWFSYFNHSGTLPVPFNLVPCPKSVSCLLLSIKDFIWNVPPGRHTKKSRNEMELN 750
[Close]
BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Match: gi|291240381|ref|XP_002740098.1| (PREDICTED: short transient receptor potential channel 4-like [Saccoglossus kowalevskii])

HSP 1 Score: 68.1662 bits (165), Expect = 4.211e-10
Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 0 
Query:   45 MWAVYQFLVSVVLLRILIVMMTITYRRIYDDLDRQWKYARAYTGIQFFDHDSLLPPPFTFLSIIVLLFQLCTDRWNRRPGKNVDNSIQDTGSNQTYATLIFQL 147
            ++A+Y  +  +VLL ILI MM+ TY RI +D D  WKY+R+   I F+D  + L PPF  L  I  L      R   +  KN   ++   G   TYATL+ +L
Sbjct:  705 LFALYNSVAIIVLLNILIAMMSNTYTRIEEDADTHWKYSRSTLWISFYDSSAALAPPFNILPSIESLRNCKRKRAFAKAKKNGIKTVDSKGV--TYATLMKEL 805
The following BLAST results are available for this feature:
BLAST of short transient receptor potential channel 6-like isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000046532.980e-1030.10supercontig:LSalAtl2s:LSalAtl2s242:708059:728091:1... [more]
EMLSAG000000074648.566e-835.94supercontig:LSalAtl2s:LSalAtl2s427:272618:406888:1... [more]
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BLAST of short transient receptor potential channel 6-like isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
gi|18202960|sp|Q9HCX4.1|TRPC7_HUMAN2.661e-925.00RecName: Full=Short transient receptor potential c... [more]
gi|10720320|sp|Q9QZC1.1|TRPC3_MOUSE4.104e-934.78RecName: Full=Short transient receptor potential c... [more]
gi|332278239|sp|Q13507.3|TRPC3_HUMAN4.143e-934.78RecName: Full=Short transient receptor potential c... [more]
gi|238054360|sp|Q9JMI9.3|TRPC3_RAT4.263e-934.78RecName: Full=Short transient receptor potential c... [more]
gi|10720321|sp|Q9UL62.1|TRPC5_HUMAN5.417e-934.21RecName: Full=Short transient receptor potential c... [more]
gi|14548292|sp|Q9QX29.2|TRPC5_MOUSE6.369e-934.21RecName: Full=Short transient receptor potential c... [more]
gi|14548283|sp|O62852.1|TRPC5_RABIT6.807e-934.21RecName: Full=Short transient receptor potential c... [more]
gi|14548296|sp|Q9WVC5.1|TRPC7_MOUSE1.119e-826.47RecName: Full=Short transient receptor potential c... [more]
gi|1316032203|sp|Q9MYW0.2|TRPC6_BOVIN1.014e-731.71RecName: Full=Short transient receptor potential c... [more]
gi|332278126|sp|P79100.2|TRPC4_BOVIN1.040e-727.88RecName: Full=Short transient receptor potential c... [more]

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BLAST of short transient receptor potential channel 6-like isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325316212|ref|XP_023339818.1|2.989e-3855.56short transient receptor potential channel 1-like ... [more]
gi|1110897646|ref|XP_019200647.1|4.046e-1131.67PREDICTED: short transient receptor potential chan... [more]
gi|908512992|ref|XP_013129805.1|4.090e-1131.67PREDICTED: short transient receptor potential chan... [more]
gi|930740579|ref|XP_014190418.1|1.029e-1030.83PREDICTED: short transient receptor potential chan... [more]
gi|548389079|ref|XP_005735998.1|1.039e-1030.83PREDICTED: short transient receptor potential chan... [more]
gi|930740581|ref|XP_014190419.1|1.140e-1030.83PREDICTED: short transient receptor potential chan... [more]
gi|657744051|ref|XP_008307196.1|1.839e-1029.75PREDICTED: short transient receptor potential chan... [more]
gi|1238895579|ref|XP_013791171.2|2.384e-1032.97short transient receptor potential channel 5-like,... [more]
gi|499019572|ref|XP_004560572.1|3.931e-1030.00short transient receptor potential channel 6 isofo... [more]
gi|291240381|ref|XP_002740098.1|4.211e-1038.83PREDICTED: short transient receptor potential chan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold18_size714446supercontigscaffold18_size714446:386192..388577 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold18_size714446-snap-gene-4.15-mRNA-1maker-scaffold18_size714446-snap-gene-4.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold18_size714446:386192..388577-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold18_size714446-snap-gene-4.15 ID=maker-scaffold18_size714446-snap-gene-4.15|Name=short transient receptor potential channel 6-like isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=2386bp|location=Sequence derived from alignment at scaffold18_size714446:386192..388577- (Tigriopus kingsejongensis)
CGAGATGTATCGTGGAGACAATGTACAACACCTCCTGCATTTTGAACAAG
CTCGATGGGAAAGGCGGATCTCAAATCACGCATGCTGACATTTCCGGTTG
CCTCATGGACATTGAGGCCGGATTCGGGTGAGTTATCCAAAATCCAAATA
ATAACTTGCGTTGGATCGTTTTCTAAAAGTGTTTCTCGCCGTTTCTTGTA
AGTAGACACATTAGGAAGACAGGTTGTTTTTTGCCTTTTTCGTTTAATGG
ATGTGACATTTTCACTCTTCAGGCCCAGTCAATGGGAAGAATATAAGAGG
AACGAAAGGTTAGAATTGTTAAGTCTTTTGAATATTAACAATCGCCAGCG
ATCTGTTAATCCAAATGAGTGACCAAATGCTAATCCCATTTACAGTAAAG
TAAGTGCTTTGCACCAAAGACGACGGAAAAAAAATCCGGAGCAATGTCCC
CATGTTTATATTTACAGCTGGGCCAAAATGCTAAAACTCTAGAAATGTAA
AACTAAATTTGATTAACTGTATATAATAGATCAGTGAACGCAGGAAACTA
ATCGCTTTAAAGCTTAACGCTTTAGAGACACTTACTTACACCTTGGCTAT
GTTAGCAATTTGCTACCCTAACTCAGATTCATTTTACAAATTACCTCCAA
GTTTTACGTGAACTAACGCCATCCCATTTTGATCTCTGTCTACAGCTCTA
CCATGTATCGTATTAAGTAAGTTGGATACTGCGTTTTTACTACCACATTC
TAGGCACCAGAGAACGTGTGCATGCATGATGAAAGCTTGGGTTAAGCTTG
TGATTTTCCCCTTGGCTTTTCTAAAAGTTTGGACCCGCTCCGCTTGGTCA
TAACTTTAAATCTTACACTCACGCTTGATGATTTAAGCAGTTCCGAGTTG
CCTAGTGCTAATGCTATACTACTTCTTATTTCAGCTACCTGAAGTCTGCA
GCCGTGCCCATGTGGGCTGTGTACCAGTTCTTAGTCAGTGTGGTCTTGCT
TCGCATTCTCATTGTCATGATGACCATCACGTATCGAAGGATCTACGACG
ACCTCGATAGGCAGTGGAAGTAAGTCCGCCGGTATCAGTTAGTGCCCAAT
CCGGTTGAAATGTTTTTCAACAATTACGTATGACAAAGGTGCTTTGCTTT
CAAAGCTCCCACTAAAGTCACAAACTCACGAACACCTTTGACATGCATCC
GGTTCAATAGCAACAATGACACACTTGAGAGCCAGATATCGTACAAAATG
TTCAAATTATAGGTTTGAAAAAAAAAAATATTTTCGCAAATCCTTGGTGG
GTTGACTCAAATTTGGACAAGCCAACAATTTCTGAACGACAGAGGGTCGC
GATTGAAGGTGTGGTTACCCATCAGGCAGTGCATTTTTCGGGTCAGGGCG
AGACATTTGGATACATGAAGGGAGAAAGCTAAACTCAGCTCGAACTTCCT
CTTTTCCTTTTGCAAAATATGTTTTAATCGCCTTGCAAAAAATGTTTTTA
ACCTGCCTGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGG
CAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCA
GGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCACT
TGAGGCAGGCAGGCACTTGAATACAGAGAATCCCAACATTTCACCGTGAT
GGACGTTAGCTTTAAAACTTGTTGAAAAAACAATCATTTCAATGAAGGAG
TTTGAAATACCTACGTACGTTCCAGAAATCTGACATGTCTTGACAGCTTG
TGCGTTGATTTATTTGCAGGTACGCCCGAGCCTACACTGGGATTCAATTC
TTTGACCACGACTCCTTACTTCCGCCTCCATTCACGTTCTTGTCCATCAT
TGTCCTCTTGTTCCAATTGTGCACTGACAGATGGAATCGACGACCGGGAA
AAAACGTCGACAATTCCATCCAGGATACTGGATCCAATCAGACTTATGCA
ACGCTCATCTTTCAGCTCTTGGATGGGGCAAAACCTAGCTTGAAGGCTGT
AGATAAGGATTGGCGAAGAAAATCCCGAAAAGTTAGTTGCAATGCGCCCG
AAAAGCCGGGGGCCTAGCCTCAGAGTCATCTAGATTGATGAGACGAATTA
ATTTGTTTTTGAAACTACACCTGACCGTGCTTATTCTCTGATCTGACAGT
CTATTTTACCTGTAGACTTTATCTCCCGATGACTGAGAGCGGCTTTGGTA
ATTGACTAATTTGAACGCGATCCGAGGACGGGAAACAAAGGTCTCAAGTC
TTTGAAGTGCGTAAGCCGTTATTATCGGCGCTCTAATCGTGTGTCACTCT
CAACATTTGCTTCCAGCAAAGCCAATGTAGTCCAGG
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Synonyms
The feature 'short transient receptor potential channel 6-like isoform x1' has the following synonyms
Synonym
Tk08479
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