antigen ki-67-like isoform x1, maker-scaffold199_size265817-snap-gene-1.37 (gene) Tigriopus kingsejongensis

Overview
Nameantigen ki-67-like isoform x1
Unique Namemaker-scaffold199_size265817-snap-gene-1.37
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of antigen ki-67-like isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005206 (supercontig:LSalAtl2s:LSalAtl2s274:45362:51525:1 gene:EMLSAG00000005206 transcript:EMLSAT00000005206 description:"maker-LSalAtl2s274-snap-gene-0.24")

HSP 1 Score: 121.324 bits (303), Expect = 3.073e-28
Identity = 107/325 (32.92%), Postives = 146/325 (44.92%), Query Frame = 0 
Query:   30 SCFSIGGSNWTVG----CSARPRIRR-SALHFH-QMGSALQVILTSLSLNPTLINHRQTLRKGEVAVLNHRDVFTVADRSFRWEYPKDSASVLKLAQSPKRGGVLTPKRSANNRDKLEGTPKNSVQAKALAAVGSRSVDALAHRRQALASPRKRVSFGPYISPELIDKTLPPSTPVRKGAMPQLAEPDTSNARQLATPSSLLKKRA--------QKLALASAEDEPKSALVRSKNDTPRLKNSSGFRTSPRQSPGGDNATPPHKRAKTAKSPQSSKRSPKQGPATPKGTPKASPRTASSAKKSLKKNSTPKSATQARA--RPKGA 338
            S F +      +G    C  R ++   SA H    +    +V + SL  N   +N  + + +G V +L H+DVF ++DRSFR+EYP D +S                           G+P            G+             + PRKRVSFGP ISPE IDK+LPPSTP++KGA+P +            TP S +K+R         Q  ++    +EP   LVR  NDTP +K SSGFRTSPR S     +   +     A SPQ   +  K   AT K TP+ +PR     KKSL  +  P +   A A   P+GA
Sbjct:   23 SIFPLWNKECLIGRHEDCDIRIQLADVSAQHARVSVAEDSKVYIESLGRNGVGVNGTRVI-EGAV-LLKHKDVFEISDRSFRFEYPADHSS---------------------------GSP----------GAGA-------------SEPRKRVSFGPMISPEYIDKSLPPSTPIKKGALPDVVP---------GTPVSHMKRRFRRKVAATPQHDSILETNEEPVGVLVRHDNDTPLVKESSGFRTSPRTSNEEKKSDVENFITSPAPSPQKKPKYSKDTVATRKKTPEKTPR-----KKSLTLSKKPSNFYGASAAKTPRGA 281
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BLAST of antigen ki-67-like isoform x1 vs. nr
Match: gi|1158922874|ref|XP_020309240.1| (proliferation marker protein Ki-67-like isoform X1 [Oncorhynchus kisutch])

HSP 1 Score: 64.6994 bits (156), Expect = 9.082e-7
Identity = 95/275 (34.55%), Postives = 132/275 (48.00%), Query Frame = 0 
Query:  175 RKRVSFGPYISPELIDKTLPPSTPVRKGAMPQLAEPDTSNARQLATP---SSLLKKRAQKLALASAEDEPKSALVRSKNDTPRLKNSSGFRTSPRQSPGGDNATPPHKRAKTAKSPQSSKRSPKQGPATP---KGTPKASPRTASSAKKSLKKNSTPKSATQARARPKGAKLAVSPRKTPKSVFQ----ASSPKSMPATPKSGVRPLKEARRSLKTPKSQHKTVSPSHLSSAKTPKSASKRPSPAKVLAPLFEEQAEKGASPTKRVSPATPKTLP 439
            RKRVSFG ++ PEL DK LPP +P+ KGA P          R L  P    SLL +RA  + L    ++       S  ++  +K S G + SP                   K+P  +K+SPK  P TP   K +PKAS +T S AKKS K ++  K+ +  +  PK +    SP K+PK+  +    A SPK+   TP S          + K+PK+  KT SP      KT K+A K PSPA+  + L +E      +P    +P TP +LP
Sbjct:  411 RKRVSFGGHLEPELFDKRLPPDSPLCKGATP--------GRRSLCAPKMKQSLL-RRASAIGLIKEHEQ-------SAPESLSVKGSPGKKASP-------------------KTPSPAKKSPKASPKTPSPAKKSPKASAKTPSPAKKSPKASA--KTPSPVKKSPKASAKTPSPTKSPKASAKTPSPAKSPKASAKTPSS----------AKKSPKA--KTPSPGK---EKTLKTAVKTPSPARRKSTLKDE----SQTPKAGKTPKTPASLP 629
The following BLAST results are available for this feature:
BLAST of antigen ki-67-like isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000052063.073e-2832.92supercontig:LSalAtl2s:LSalAtl2s274:45362:51525:1 g... [more]
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BLAST of antigen ki-67-like isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of antigen ki-67-like isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 11
Match NameE-valueIdentityDescription
gi|1158922874|ref|XP_020309240.1|9.082e-734.55proliferation marker protein Ki-67-like isoform X1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold199_size265817supercontigscaffold199_size265817:97247..99911 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold199_size265817-snap-gene-1.37-mRNA-1maker-scaffold199_size265817-snap-gene-1.37-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold199_size265817:97247..99911+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold199_size265817-snap-gene-1.37 ID=maker-scaffold199_size265817-snap-gene-1.37|Name=antigen ki-67-like isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=2665bp|location=Sequence derived from alignment at scaffold199_size265817:97247..99911+ (Tigriopus kingsejongensis)
GCTCGACCCCACGCGCAAACCCCCGGCAGGATTTCCGGCCAACGACCTGA
CTCTGATGCCCAGCCCCAGGGGCAGATCAGTCGCCAATCGTGCTTTTCGA
TTGGGGGTTCGAATTGGACCGTGGGGTGCAGTGCCAGGCCTAGAATCCGA
CGGTCAGCTCTGCATTTTCACCAGATGGGATCTGCGTTGCAGGTCATTTT
GACGTCGCTCTCGTTGAATCCCACGCTCATCAACCATCGTCAAACCCTGC
GGAAGGGGGAGGTGGCCGTCTTGAACCACCGAGATGTATTCACGGTGGCC
GATCGCTCCTTCCGGTGGGAGTATCCCAAGGATTCGGCTTCGGTCCTAAA
GTTGGCTCAGAGTCCCAAACGGGGCGGCGTGCTCACCCCCAAACGCTCGG
CCAACAACCGCGACAAACTCGAGGGCACGCCCAAGAACTCGGTTCAGGCC
AAAGCCCTGGCTGCTGTGGGCTCGCGCTCGGTCGATGCTCTGGGTAAGTC
GATTGCGTTTCGACCCCCTGTCATGATCCATGGGATTGACCTCACTTTTC
GCATATCCGGATAGCACACCGGCGACAGGCTCTAGCCTCGCCCAGAAAGC
GGGTATCTTTTGGACCCTACATCTCGCCTGAGCTCATCGACAAGACTCTA
CCACCCAGCACACCCGTGCGCAAGGGTGCTATGCCTCAGCTAGCCGAACC
GGACACATCCAACGCTCGGCAGTTGGCCACGCCCTCATCGCTCTTGAAGA
AACGTGCTCAGAAACTGGCTCTGGCGGTAAGTGGGGTGCCATGTTGAGCG
TTCTGTCGGTTCGAATAGATCAATTGAAGACGTCACATTTTATATTTCAG
TCCGCCGAAGATGAGCCTAAGAGTGCTCTAGTGCGGTCCAAAAACGATAC
CCCCCGTTTGAAGAACTCGTCGGGTTTCAGAACCTCGCCCAGACAATCTC
CCGGCGGAGATAATGCCACTCCGCCCCACAAGCGCGCCAAGACTGCAAAA
TCCCCGCAAAGTTCCAAACGATCGCCCAAGCAGGGGCCAGCAACGCCCAA
AGGGACTCCCAAAGCGAGCCCCAGAACTGCCAGTAGTGCAAAGAAGTCGC
TCAAAAAGAACAGCACCCCAAAATCTGCAACCCAGGCTAGAGCTAGGCCC
AAGGGCGCCAAGTTGGCCGTATCTCCGCGGAAAACCCCAAAGTCGGTCTT
CCAAGCCTCCTCGCCCAAGTCGATGCCGGCTACCCCCAAATCCGGAGTGA
GGCCTCTGAAAGAAGCACGTCGAAGCCTCAAAACACCCAAGAGCCAGCAT
AAGACGGTGTCTCCCAGCCATTTATCTTCGGCTAAAACGCCCAAGTCTGC
ATCCAAGCGCCCATCCCCCGCCAAAGTGTTGGCTCCCCTCTTCGAAGAAC
AAGCAGAGAAGGGTGCATCGCCCACTAAACGGGTATCGCCTGCAACTCCA
AAAACCTTGCCGCTCCAGAAGCGAGCCCTGGGGACTCCAAAATCGGCTAT
GGTGGCTAAGACGCCCAAATCCAGACTTCCTGCCATGACCCCTAGGTCGG
TTAGGATCGCACCGTCGACCAAGAAGGATCCTTTAAAGTCCGTGAAAAAG
TCTGGAAAGATCACTAAGACGCCCAAGACACTTAAAGCTAAGACGCCAGC
TAAATTAGGGAAGAAGAATTGGGCCGACGTTGTCAAGAAGACTCCTGCCC
CTAGTGCCCTCAGGATTATGAAAGCCAACCGAGCCTTGAGAATGATACCC
AAAAGAGGCAAGAAGGTCAAAAAGCCCACAACTATTGCCGGAAGGAAGAG
TGTAAGGACCTTCAGATTAACAATGTTTTTCATTTCGGCATGGAAACTCA
TGAACCACATTTCCATATTTCAGAGCACCAAGCTGGCTGAGAGTGGACAT
GCCCTATCACCAGAGGACATAGTCATTGGGAAGAGGTCGCCTTTGACCAA
ACCCAGAATAGAAGTTACCAAGGTAACCAGCAACCGAATGCAATCCCTAT
TGTGTCGTAATGATTTAATTCTTCATCAGGCATCCCCATTGGCCAAAACA
AATCCTAAAAAATCGGCTACTCCCAGAAAAGAAGCATCCCCTCGGCAAAA
GAGAAATCTCTCTCCCCAAAAGACGCCTCTATCTGTGCAAAGAAGCATTG
GAAAATTTACAAGGTCGCCGCGATCAAGTGGAAATCTATCCTTTTCCCTT
GCCCTCACCCCTGGTTTCGATTTCTCGTCCATTCAAACACCGAATATTCC
CCTCGAGACCTTCGTTTCGCCTTTGACAGTTTCTGCCAAGAATACTCCAA
GAAAGAGGTTGTCTCTAACTTCTCCACTTGCAACACCCAAACTAAGCAAA
CTCCATCTCCTGAATCCAAAATCCAAGACTCCCGCCAAAAGCCCAAACCG
TATGGTTGCAGAGAGCCCCAAAGCCAAGACTCCGGTTAAGAACCTTGAGT
CAAAAACTCCTTCCAAAAGCCCCAAAACTCTGGCGGTCAAGAGCCCAAAG
AGTGACACTCCCGCCAAGAGCCCAAAGAGTGACACTCCCGCCAAGAGCCC
CCGGATAAAGACACCGGCTAAATCTCCTGTGGTCAATGGCACCAAAGCCA
AGACTCCGGCTAAATCTCCTGTGGTCAATAGCACCAAAGCCAAGACTCCG
GCTAAATCTCCTGTG
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Synonyms
The feature 'antigen ki-67-like isoform x1' has the following synonyms
Synonym
Tk08933
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