atp-dependent dna helicase, maker-scaffold1_size3401120-snap-gene-26.42 (gene) Tigriopus kingsejongensis

Overview


Name	atp-dependent dna helicase
Unique Name	maker-scaffold1_size3401120-snap-gene-26.42
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000003002 (supercontig:LSalAtl2s:LSalAtl2s170:674355:677674:-1 gene:EMLSAG00000003002 transcript:EMLSAT00000003002 description:"maker-LSalAtl2s170-snap-gene-6.11")

HSP 1 Score: 205.297 bits (521), Expect = 2.878e-60
Identity = 122/372 (32.80%), Postives = 182/372 (48.92%), Query Frame = 0

Query:    9 KVLEETFGYQSFRGLQGEVVQHI-CDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPA-TLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYHIQTR--------------------------------HKGIEQLLNFINENHAD--------RPDVRFVAHFDL-------------------------------PKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQM---MENGSNNDQRRVEHHKLEAMLGL 304
            K+L  +FGY +FR +Q  ++  + CD G +LV+M TG GKSLCYQ PA+    +T+V+SPLI+LM+DQV  L+ + + + FL S   Q      + ++++   R++Y+ PE +     TL+ L   ++ L A+DEAHCVSQWGHDFR  Y +L  L + FP+VP + LTATA  + + DI   L L +   ++ SFDRPN+   ++++                                 K +E++ + +  N  +         P VR   H D                                P+ +E+YYQE GRAGRDG+ S V + Y   D    R     MENG   + RR   H++E  L L
Sbjct:   47 KILSSSFGYSAFRPVQWNIISRVLCDAGDSLVVMATGYGKSLCYQFPAVYSGKVTLVISPLISLMEDQVAKLRVSNIPSTFLGSG--QTMMPDTMSNIKENKYRVVYVTPEYVDTSLDTLSKLLKDRLVLVAVDEAHCVSQWGHDFRSSYRKLGILKQTFPNVPIMGLTATATPEVQKDISKSLSLINPSYFVTSFDRPNLFIEVKSKVAIWRDLSLLMTKENGEDWVFPHGSTIIYCPTRKEVEKVGDVLTSNSVNHLLYHAGLSPKVRKKNHEDFIFDRCSLVVCTVAFGMGIDKSDVRLVVHYGAPRDMESYYQEIGRAGRDGMSSRVRVYYSTTDFSVHRFFLSDMENGKWKEYRRKMMHEMEIYLSL 416

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BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001573 (supercontig:LSalAtl2s:LSalAtl2s1271:90201:96916:-1 gene:EMLSAG00000001573 transcript:EMLSAT00000001573 description:"maker-LSalAtl2s1271-augustus-gene-0.23")

HSP 1 Score: 156.762 bits (395), Expect = 4.175e-43
Identity = 88/213 (41.31%), Postives = 126/213 (59.15%), Query Frame = 0

Query:    9 KVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVR--QGGLRLLYMAPERLLMPATLN----LLHTLKIA-LFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYHIQTR 214
            K L+  FG + FR  Q   V          VLMPTGGGKSLCYQ+PA ++ G+T+V+SPL++L+ DQV  L   G+ A  L+        + + + +R    GL LLY+ PE++     LN     L++ K+   F IDEAHCVSQWGHDFRP+Y  L +L   +P+VP +ALTATA  + R DI  +L +     ++ SF+R N+ Y ++ +
Sbjct:  562 KKLKSKFGIRDFRPNQLPAVNAALLNHDTFVLMPTGGGKSLCYQLPASIQGGVTVVISPLVSLIYDQVSKLNGLGIPADHLSGD-DYGRQRKIYDKLRLLTPGLTLLYVTPEKISASNELNGVFSSLYSRKLLNRFVIDEAHCVSQWGHDFRPDYKLLHKLRSVYPEVPFMALTATATPRVRTDILHQLNMKSPKWFLSSFNRQNLIYEVKPK 773

HSP 2 Score: 80.1073 bits (196), Expect = 6.547e-17
Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 0

Query:  177 TADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH-IQTRHKGIEQLLNFINENHADRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSN-NDQRRVEHHK-LEAML 302
            TA+D T + IKA   L  H    DS +R  +Q   I+ + K +   + F      D+PDVR+V H+ LPKSIE YYQE+GRAGRDG PS   + Y   D   LR+++E  SN N Q +  HH+ L AM+
Sbjct:  808 TAEDLTASGIKA---LSYHAGLKDS-ERSRVQDQWIKDKVKVVCATIAF--GMGIDKPDVRYVMHYSLPKSIEGYYQESGRAGRDGRPSNCILFYSYGDMHRLRKLIEMDSNANYQAQKTHHENLHAMV 930

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BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001248 (supercontig:LSalAtl2s:LSalAtl2s1202:153682:156705:1 gene:EMLSAG00000001248 transcript:EMLSAT00000001248 description:"snap_masked-LSalAtl2s1202-processed-gene-0.15")

HSP 1 Score: 123.25 bits (308), Expect = 1.254e-31
Identity = 76/189 (40.21%), Postives = 106/189 (56.08%), Query Frame = 0

Query:   14 TFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPA--LVREG--LTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLK-----IALFAIDEAHCVSQWGHDFRPEYAQL-SQLAEQFPDVPRLALTATADDQTRADIKARLQL 192
            +FG+  FR  Q E +  I  G   LV++ TG GKSL YQ+PA  L +E   LTIVVSPL++LM+DQ++N+    + A   +S L +     + + +R+  L +L+M PE L      + L TLK     +    IDEAHC+SQW H+FRP Y QL   + E       L L ATA ++T   I  RLQ+
Sbjct:  267 SFGHSEFRRGQKEAIFRILRGEXTLVVLSTGSGKSLIYQIPAYLLAKEDSRLTIVVSPLVSLMEDQLRNMP-TLIQADLFHSDLGRTQLVKIKDGLRENKLAILFMTPETLF-----SQLKTLKEFIPRLGFVCIDEAHCMSQWSHNFRPAYFQLGGAIRESLKATTILGLXATATEKTITTIAERLQV 449

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BLAST of atp-dependent dna helicase vs. L. salmonis genes
Match: EMLSAG00000001574 (supercontig:LSalAtl2s:LSalAtl2s1271:98605:106214:1 gene:EMLSAG00000001574 transcript:EMLSAT00000001574 description:"maker-LSalAtl2s1271-augustus-gene-0.21")

HSP 1 Score: 89.3521 bits (220), Expect = 6.025e-20
Identity = 65/202 (32.18%), Postives = 90/202 (44.55%), Query Frame = 0

Query:    8 QKVLEETFGYQSFRGLQGE------VVQHICDGGSALVLMPTGGGKSLCYQVPA-LVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQG--GLRLLYMAPERLLMPATLNLLHTLK----IALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHP 196
            ++ L   FG+ SFR  + E      V +  C+     V MPTG GKSL Y +P  L+ +G   +V                                 + VL D+       R LY+ PE+       ++L  L     +  F IDEAHCVSQWGHDFRP+Y +L QL +       LALTATA  +  AD+  +L++   P
Sbjct:   13 EQALNSFFGHPSFRSKEQEAAIRAIVEEEDCER-DVFVSMPTGSGKSLVYXLPGVLLPKGRITIVE-------------------------------RKRVLRDIHAKCPDTRFLYVTPEQCATNTFKSILEKLVKFNVLGYFVIDEAHCVSQWGHDFRPDYLKLGQLRKIINKTRVLALTATASKEVAADVFKQLKMKKEP 182

HSP 2 Score: 60.4622 bits (145), Expect = 2.070e-10
Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 0

Query:  231 DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSN--NDQRRVE 294
            D+  VRFVAH+ +P++I  YYQE+GRAGRDG PS   + +  ++   +  +++ GSN    +RR E
Sbjct:  298 DKATVRFVAHWSVPQTIAGYYQESGRAGRDGKPSFCRIYHSREEKGAIAFLLQQGSNKAKSERRKE 363

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|19859341|sp|P40724.3|RECQ_SALTY (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 266.159 bits (679), Expect = 1.393e-83
Identity = 156/358 (43.58%), Postives = 202/358 (56.42%), Query Frame = 0

Query:    8 QKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQL---------FDHP-------EYIDSFD-----------RPNIQY------------HIQTR-------HKGIEQLLNF-INENH-----------------ADRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQRRVEHHKLEAM 301
            ++VL+ETFGYQ FR  Q  ++     G   LV+MPTGGGKSLCYQ+PAL+ +GLT+VVSPLI+LM+DQV  L  NGVAAA LNS+ S++    V+   R G +RLLY+APERL++   L+ L      L A+DEAHC+SQWGHDFRPEYA L QL ++FP +P +ALTATADD TR DI   L L         FD P       E     D           +  I Y             +Q+R       H G+E  +   + E                    ++P+VRFV HFD+P++IE+YYQETGRAGRDGLP+   + Y   D   LR+ +E       + +E HKL AM
Sbjct:   14 KQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLYIAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQLQDIERHKLNAM 371

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|54041622|sp|P15043.5|RECQ_ECOLI (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 247.284 bits (630), Expect = 2.759e-76
Identity = 122/220 (55.45%), Postives = 157/220 (71.36%), Query Frame = 0

Query:    8 QKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYHIQTRHKGIEQLLNFINE 227
            ++VL+ETFGYQ FR  Q E++  +  G   LV+MPTGGGKSLCYQ+PAL+  GLT+VVSPLI+LM+DQV  LQ NGVAAA LNS+ +++    V+   R G +RLLY+APERL++   L  L      L A+DEAHC+SQWGHDFRPEYA L QL ++FP +P +ALTATADD TR DI   L L D    I SFDRPNI+Y +  + K ++QL+ ++ E
Sbjct:   14 KQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQE 233

HSP 2 Score: 82.0333 bits (201), Expect = 3.732e-16
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0

Query:  231 DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQRRVEHHKLEAM 301
            ++P+VRFV HFD+P++IE+YYQETGRAGRDGLP+   + Y   D   LR+ +E       + +E HKL AM
Sbjct:  301 NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAM 371

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|2500112|sp|P71359.1|RECQ_HAEIN (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 234.572 bits (597), Expect = 2.821e-71
Identity = 115/216 (53.24%), Postives = 150/216 (69.44%), Query Frame = 0

Query:   10 VLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYHIQTRHKGIEQLLNFI 225
            VL+  FGYQSFR  Q EV+    +G  ALV+M TG GKSLCYQ+PAL  +GLT+V+SPLI+LM+DQV  LQ NG+ A FLNSS + +  Q V   +  G L+LLY++PE+++  +   L+   K+   AIDEAHC+SQWGHDFRPEY QL  L   FPD P +ALTATAD  T+ DI   L L +  +YI SFDRPNI+Y ++ ++K +EQL  F+
Sbjct:   19 VLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLKLLYVSPEKVMTNSFFQLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQDILRHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFV 234

HSP 2 Score: 82.0333 bits (201), Expect = 3.764e-16
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 0

Query:  202 FDRPNIQYHIQTRHKGIEQLLNFINENHADRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQRRVEHHKLEAM 301
            F R N+Q  + T   G+            ++ +VRFVAHFDLP+SIE+YYQETGRAGRD LP+   + Y   D   L++++       QR++E HKLEA+
Sbjct:  285 FQRDNVQVVVATIAFGM----------GINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILLEKPETPQRQIEQHKLEAI 374

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|18202817|sp|Q9CL21.1|RECQ_PASMU (RecName: Full=ATP-dependent DNA helicase RecQ)

HSP 1 Score: 226.868 bits (577), Expect = 2.793e-68
Identity = 113/216 (52.31%), Postives = 143/216 (66.20%), Query Frame = 0

Query:   10 VLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYHIQTRHKGIEQLLNFI 225
            VL   FGYQSFR  Q EV+     G  +LV+M TG GKSLCYQ+PAL  EGLT+V+SPLI+LM+DQV  L  NG+ A +LNSS +    Q V   +  G L+LLY++PE+++  +  +L+   K++  AIDEAHC+SQWGHDFRPEY QL  L   FP  P +ALTATAD  TR DI   L L     YI SFDRPNI+Y +  + K +EQL  F+
Sbjct:   29 VLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPLISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSGTLKLLYVSPEKVMTTSFFHLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLGGLKSCFPHAPIMALTATADHATRQDILRHLNLQSPHVYIGSFDRPNIRYTLVEKFKPMEQLCRFV 244

HSP 2 Score: 74.3294 bits (181), Expect = 1.230e-13
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 0

Query:  201 SFDRPNIQYHIQTRHKGIEQLLNFINENHADRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQRRVEHHKLEAM 301
            +F R N+Q  + T   G+            ++ +VRFV HFDLP+SIE+YYQETGRAGRD LP+   + Y   D   L +++     + QR++E  KL+A+
Sbjct:  294 AFQRDNVQVVVATIAFGMG----------INKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILLEKPESPQRQIEALKLQAI 384

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|75334309|sp|Q9FT74.1|RQL1_ARATH (RecName: Full=ATP-dependent DNA helicase Q-like 1; AltName: Full=RecQ-like protein 1; Short=AtRecQ1; Short=AtRecQl1)

HSP 1 Score: 196.823 bits (499), Expect = 4.315e-57
Identity = 128/363 (35.26%), Postives = 183/363 (50.41%), Query Frame = 0

Query:   15 FGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQ-QNGVAAAFLNSSLSQQAAQAVLEDVRQG--GLRLLYMAPERLLMPATLNLLHTLK-------IALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYHIQTRHK------------------GIEQLLN---------FINEN--------HADRP--------------DVRFVA------------------HFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQRRVEHHKLEA 300
            FG + FR LQ +  +   +     VLMPTGGGKSLCYQ+PA ++ G+TIV+SPL++L+QDQ+  L  + G+ A FLNS  +   A AVL+++R+     +LLY+ PE++    + + L TL+       +A F +DEAHCVSQWGHDFRP+Y +L  L + FP VP +ALTATA +    D+   L++   P    SFDR N++Y +  + K                  GI   L+         F+NE         HA  P              +VR V                   H  L K++E+YYQE+GRAGRDGL +     Y  +D   +  M+ NG   +  R +    +A
Sbjct:  202 FGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAGVTIVISPLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTPEKI--AGSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTATATESVCQDVLKSLRIPRAPVLKMSFDRINLKYEVIVKTKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQA 562

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|75329797|sp|Q8L840.1|RQL4A_ARATH (RecName: Full=ATP-dependent DNA helicase Q-like 4A; AltName: Full=RecQ-like protein 4A; Short=AtRecQ4A; Short=AtRecQl4A; AltName: Full=SGS1-like protein; Short=AtSGS1)

HSP 1 Score: 201.06 bits (510), Expect = 6.594e-57
Identity = 129/349 (36.96%), Postives = 176/349 (50.43%), Query Frame = 0

Query:   12 EETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDV--RQGGLRLLYMAPERLLMPATL-----NLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARL---------QLFDHP--------------EYIDSFDRPN----------------------IQ--------YH----------IQTRHKGIEQLLNFINENHA-----DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENG 285
            ++ FG  SFR  Q E++     G    VLMPTGGGKSL YQ+PAL+  G+T+V+SPL++L+QDQ+ NL Q  + AA L++ +       + +++       +LLY+ PE++    +L     NL     +A F IDEAHCVSQWGHDFRP+Y  L  L ++FP++P LALTATA    + D+   L         Q F+ P              E ID F + N                      +Q        YH          IQT+    E  +N I    A     ++PDVRFV H  LPKSIE Y+QE GRAGRDG  S+  + YG  D I ++ M+  G
Sbjct:  446 KKVFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDE--INIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQG 792

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|75334305|sp|Q9FT70.1|RQL4B_ARATH (RecName: Full=ATP-dependent DNA helicase Q-like 4B; AltName: Full=RecQ-like protein 4B; Short=AtRecQ4B; Short=AtRecQl4B)

HSP 1 Score: 200.29 bits (508), Expect = 9.406e-57
Identity = 129/346 (37.28%), Postives = 175/346 (50.58%), Query Frame = 0

Query:   15 FGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDV--RQGGLRLLYMAPERLLMPATLNLLHTLKI-------ALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARL---------QLFDHP--------------EYIDSFDRPN------IQYHIQTR--HKGIEQL------------------------------LNFINENHA-----DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENG 285
            FG  SFR  Q E++     G    VLMPTGGGKSL YQ+PAL+  G+T+V+SPL++L+QDQ+ NL Q  ++AA L++ +       +L+++   +   +LLY+ PE++    + +LL  L+I       A F IDEAHCVSQWGHDFRP+Y  L  L ++FP++P LALTATA    + D+   L         Q F+ P              E ID F R N      I Y +      K  E L                              +N I    A     ++PDVRFV H  LPKSIE Y+QE GRAGRDG  S+  + Y   D I ++ M+  G
Sbjct:  465 FGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVISPLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKV--AKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQG 808

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|1710074|sp|P50729.1|RECS_BACSU (RecName: Full=Probable ATP-dependent DNA helicase RecS; AltName: Full=Recombination protein S)

HSP 1 Score: 189.889 bits (481), Expect = 1.837e-55
Identity = 120/326 (36.81%), Postives = 175/326 (53.68%), Query Frame = 0

Query:    8 QKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVA-AAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLAL--TATA-------------------DDQTRADIKARLQ-LFDHPEYID-------SFDRPNIQY------------HIQTR--------HKGIE-------------QLLNFINENHA-----DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPST 265
            Q+ L + FG+ SF+  Q ++++ I  G   + ++PTGGGKSLCYQ+P  + +G+ ++VSPL++LM+DQVQ L+  G   AA LNS L++Q  Q VLE + +   + LY++PE L  P  L  L ++ I+LF IDEAHC+S+WGHDFRP+Y++L QL ++    P LAL  TAT                    +   R +I  R++   D  E ID       +   P I Y             I+++        H G+E               L+ I   +A     D+PD+R+V HF LP++ EA+ QE GRAGRDG PS 
Sbjct:    5 QQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVLIVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVLEHIHR--YKFLYLSPEALQSPYVLEKLKSVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKKLGHPPVLALTATATKETLQDVMNLLELQHAVRHLNSVNRPNIALRVENAADTAEKIDRVIQLVENLQGPGIVYCPTRKWAKELAGEIKSKTSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRYVIHFHLPQTAEAFMQEIGRAGRDGKPSV 328

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|81910891|sp|Q6AYJ1.1|RECQ1_RAT (RecName: Full=ATP-dependent DNA helicase Q1; AltName: Full=DNA-dependent ATPase Q1; AltName: Full=RecQ protein-like 1)

HSP 1 Score: 187.578 bits (475), Expect = 1.292e-53
Identity = 119/353 (33.71%), Postives = 167/353 (47.31%), Query Frame = 0

Query:   10 VLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDV--RQGGLRLLYMAPER-----LLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQL---------FDHPE-YIDSFDRP--------NIQYHIQTRHKGIEQLLNFINEN-------------------HA--------------------------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQM--MEN 284
            VL + F  Q FR LQ E V          ++MPTGGGKSLCYQ+PAL  +G T+V+ PLI+LM+DQ+  LQQ G++A  LNSS S++  + V  ++  +   L+L+Y+ PE+     + M          ++   A+DE HC SQWGHDFRP+Y  L  L  QFP++  + LTATA +    D +  L +         F+ P  Y +   +P        NI   I  R+KG   ++   ++                    HA                                D+PDVRFV H  + KS+E YYQE+GRAGRD   +   + YG  D   +  M  MEN
Sbjct:   82 VLRDVFKLQKFRPLQLETVNATMARKDIFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLQQLGISATMLNSSSSKEHVKCVHTEMMNKNSHLKLIYVTPEKIAKSKMFMSRLEKAYEAGRLTGVAVDEVHCCSQWGHDFRPDYKALGILKRQFPNISLIGLTATATNHVLKDAQKILCVEKCLTFTASFNRPNLYYEVRQKPSSAEDFIENIANLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHANMEPEDRTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGFGDIFRISSMVVMEN 434

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BLAST of atp-dependent dna helicase vs. SwissProt
Match: gi|75334307|sp|Q9FT72.1|RQL3_ARATH (RecName: Full=ATP-dependent DNA helicase Q-like 3; AltName: Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3)

HSP 1 Score: 188.734 bits (478), Expect = 1.696e-53
Identity = 96/212 (45.28%), Postives = 131/212 (61.79%), Query Frame = 0

Query:    9 KVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQG--GLRLLYMAPERLLMPATLNLLHTLK----IALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYHIQTR 214
            K+L   FG+  FRG Q E +Q +  G     LMPTGGGKS+CYQ+PAL + G+ +VVSPLIALM++QV  L++ G+AA +L+S+ +      + ED+  G   +RLLY+ PE +     +  L  L     + L AIDEAHC+S WGHDFRP Y QLS L +   DVP LALTATA  + + D+   L L +      SF+RPNI Y ++ +
Sbjct:   26 KLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYK 237

HSP 2 Score: 69.3218 bits (168), Expect = 6.277e-12
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0

Query:  231 DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSN 287
            D+ DVR V HF++PKS+E++YQE+GRAGRD LPS   + YG+ D   +  ++ N  N
Sbjct:  321 DKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSEN 377

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BLAST of atp-dependent dna helicase vs. nr
Match: gi|648532199|ref|WP_026223950.1| (DNA helicase RecQ [Marinobacter lipolyticus])

HSP 1 Score: 363.999 bits (933), Expect = 5.985e-119
Identity = 196/365 (53.70%), Postives = 230/365 (63.01%), Query Frame = 0

Query:    6 SPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKG---------------IEQLL------------------------NFINENHA------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            +P++VL E FGY SFR LQ ++V+ +C GG ALVLMPTGGGKSLCYQVPALVR G  IVVSPLIALMQDQV  L++ GV AAFLNS++  + A+A    +  G L LLY APERL+ P T+ LLH   IALFAIDEAHCVSQWGHDFR +Y QLS LA+ FPD+PR+ALTATAD++TR +I  RL L     +I  FDRPNIQY               I+T H+G                 +LL                         F+ E+              D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E    ND  +RVE  KL+AMLGL
Sbjct:   20 TPEQVLHEVFGYDSFRPLQEDIVKELCAGGDALVLMPTGGGKSLCYQVPALVRPGTGIVVSPLIALMQDQVNALKELGVRAAFLNSTMDFEQARATEYALMSGELDLLYCAPERLIQPRTIELLHNTSIALFAIDEAHCVSQWGHDFRSDYLQLSMLAQTFPDIPRIALTATADERTRKEIAERLSLTQARHFISGFDRPNIQYRITPKINANKQLLDFIKTEHEGDCGIVYCLSRKKVDATAKLLQSKGYNALPYHAGLAADERASNQDRFLREDSVIIVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLETSQGNDHFKRVERQKLDAMLGL 384

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BLAST of atp-dependent dna helicase vs. nr
Match: gi|753899603|ref|WP_041635222.1| (MULTISPECIES: DNA helicase RecQ [Marinobacter] >gi|857135752|gb|AKO52603.1| ATP-dependent DNA helicase RecQ [Marinobacter psychrophilus])

HSP 1 Score: 362.844 bits (930), Expect = 1.946e-118
Identity = 195/365 (53.42%), Postives = 230/365 (63.01%), Query Frame = 0

Query:    6 SPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKG---------------IEQLL------------------------NFINENHA------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            +P++VL E FGY SFR LQ ++V+ +C GG ALVLMPTGGGKSLCYQVPALVR G  IVVSPLIALMQDQV  L++ GV AAFLNS++  + A+A    +  G L LLY APERL+ P T+ LLH   IALFAIDEAHCVSQWGHDFR +Y QLS LA+ FPD+PR+ALTATAD++TR +I  RL L     +I  FDRPNIQY               I+T H+G                 +LL                         F+ E+              D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E    ND  +R+E  KL+AMLGL
Sbjct:   20 TPEQVLHEVFGYDSFRPLQEDIVKELCAGGDALVLMPTGGGKSLCYQVPALVRPGTGIVVSPLIALMQDQVNALKELGVRAAFLNSTMDFEQARATEYALMSGELDLLYCAPERLIQPRTIELLHNTSIALFAIDEAHCVSQWGHDFRSDYLQLSMLAQTFPDIPRIALTATADERTRKEIAERLSLTQARHFISGFDRPNIQYRITPKINANKQLLDFIKTEHEGDCGIVYCLSRKKVDATAKLLQSKGYNALPYHAGLAADERASNQNRFLREDSIIIVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLETSQGNDHFKRIERQKLDAMLGL 384

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BLAST of atp-dependent dna helicase vs. nr
Match: gi|550783702|gb|ERS81674.1| (ATP-dependent DNA helicase RecQ [Marinobacter sp. EVN1])

HSP 1 Score: 361.688 bits (927), Expect = 4.954e-118
Identity = 193/365 (52.88%), Postives = 234/365 (64.11%), Query Frame = 0

Query:    6 SPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKG---------------IEQLLN------------------------FINENHA------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            +P++VL E FGY+SFR LQG++V+ + +GG ALVLMPTGGGKSLCYQVPALVR G  IV+SPLIALMQDQV  L++ GV AAFLNS++  + A+A    +  G L LLY APERL+ P T+ LLH   ++LFAIDEAHCVSQWGHDFR +Y QLS LA++FP +PR+ALTATAD++TR +I  RL L +   +I  FDRPNIQY               I+  H+G                 QLL+                        F+ E+              D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E    NDQ +RVE  KL+AMLGL
Sbjct:   19 NPEQVLHEVFGYESFRPLQGDIVREVVNGGDALVLMPTGGGKSLCYQVPALVRPGTAIVISPLIALMQDQVAALRELGVKAAFLNSTMDFEQARATEYALATGELDLLYCAPERLIQPRTIELLHNASLSLFAIDEAHCVSQWGHDFRSDYLQLSMLAQEFPGIPRIALTATADERTRKEIAERLSLTNARHFISGFDRPNIQYRITPKTNANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAQLLSSKGYTALPYHAGLSAEDRARNQERFLREDGVIVVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLEASQGNDQFKRVERQKLDAMLGL 383

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BLAST of atp-dependent dna helicase vs. nr
Match: gi|1274486522|ref|WP_099616266.1| (DNA helicase RecQ [Marinobacter guineae] >gi|1270221267|gb|PHQ26182.1| DNA helicase RecQ [Marinobacter guineae])

HSP 1 Score: 361.688 bits (927), Expect = 6.662e-118
Identity = 191/369 (51.76%), Postives = 232/369 (62.87%), Query Frame = 0

Query:    2 TTPLSPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKGIEQLLNFINEN-------------------HA--------------------------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            T+   P++VL E FGY++FR LQG++++ + +G  ALVLMPTGGGKSLCYQVPALVR G  IV+SPLIALMQDQV  L++ GV AAFLNS++  + A+A    +  G L LLY APERL+ P T+ LLH+  IALFAIDEAHCVSQWGHDFR +Y QLS LAE FP +PR+ALTATAD++TR +I  RL L     ++  FDRPNIQY               I+  H+G   ++  ++ N                   HA                                D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E    NDQ +RVE  KL+AMLGL
Sbjct:   17 TSGRDPEQVLHEVFGYETFRPLQGDIIREVSEGRDALVLMPTGGGKSLCYQVPALVRSGTAIVISPLIALMQDQVAALKELGVKAAFLNSTMDFEQARATEYALMTGELDLLYCAPERLIQPRTIELLHSASIALFAIDEAHCVSQWGHDFRSDYLQLSMLAEAFPGIPRIALTATADERTRKEIAERLSLTKAKHFVSGFDRPNIQYRIAPKTNANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAKTLAQKGYTALPYHAGLPAEQRSHHQERFLREDGVIIVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLEGSQGNDQFKRVERQKLDAMLGL 385

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BLAST of atp-dependent dna helicase vs. nr
Match: gi|665842445|ref|WP_031210562.1| (DNA helicase RecQ [Marinobacter sp. EVN1])

HSP 1 Score: 361.688 bits (927), Expect = 6.866e-118
Identity = 193/365 (52.88%), Postives = 234/365 (64.11%), Query Frame = 0

Query:    6 SPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKG---------------IEQLLN------------------------FINENHA------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            +P++VL E FGY+SFR LQG++V+ + +GG ALVLMPTGGGKSLCYQVPALVR G  IV+SPLIALMQDQV  L++ GV AAFLNS++  + A+A    +  G L LLY APERL+ P T+ LLH   ++LFAIDEAHCVSQWGHDFR +Y QLS LA++FP +PR+ALTATAD++TR +I  RL L +   +I  FDRPNIQY               I+  H+G                 QLL+                        F+ E+              D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E    NDQ +RVE  KL+AMLGL
Sbjct:   21 NPEQVLHEVFGYESFRPLQGDIVREVVNGGDALVLMPTGGGKSLCYQVPALVRPGTAIVISPLIALMQDQVAALRELGVKAAFLNSTMDFEQARATEYALATGELDLLYCAPERLIQPRTIELLHNASLSLFAIDEAHCVSQWGHDFRSDYLQLSMLAQEFPGIPRIALTATADERTRKEIAERLSLTNARHFISGFDRPNIQYRITPKTNANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAQLLSSKGYTALPYHAGLSAEDRARNQERFLREDGVIVVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLEASQGNDQFKRVERQKLDAMLGL 385

[Close]

BLAST of atp-dependent dna helicase vs. nr
Match: gi|496224307|ref|WP_008938342.1| (DNA helicase RecQ [Marinobacter santoriniensis] >gi|469612259|gb|EMP55394.1| ATP-dependent DNA helicase RecQ [Marinobacter santoriniensis NKSG1])

HSP 1 Score: 361.303 bits (926), Expect = 9.018e-118
Identity = 195/365 (53.42%), Postives = 234/365 (64.11%), Query Frame = 0

Query:    6 SPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKG------------IEQLLNFINEN-------HA--------------------------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            SP +VL+E FGY+SFR LQGE+V+ + +GG ALVLMPTGGGKSLCYQVPALVR G  IV+SPLIALMQDQV  L++ GV AAFLNS++  + A++    +  G L LLY APERL+ P TL+LL    IALFAIDEAHCVSQWGHDFR +Y QLS LAE FP+VPR+ALTATAD++TRA+I  RL L +   ++  FDRPNIQY               I++ H G            +E     +++N       HA                                D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E    +D  +RVE  KL+AMLGL
Sbjct:   21 SPHQVLQEVFGYESFRPLQGEIVEEVINGGDALVLMPTGGGKSLCYQVPALVRPGTAIVISPLIALMQDQVAALRELGVRAAFLNSTMDFEQARSTEYALTTGELDLLYCAPERLIQPRTLDLLQGAPIALFAIDEAHCVSQWGHDFRSDYLQLSMLAEAFPNVPRIALTATADERTRAEIADRLSLNNARHFVSGFDRPNIQYRIAPKTNANKQLLDFIKSEHDGDCGIVYCLSRNKVEATARMLSQNGLTALPYHAGLDAAQRAEHQERFLREDGVIIVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGNPSTAWMVYGLQDVIKLRQMLEGSQGSDHFKRVERQKLDAMLGL 385

[Close]

BLAST of atp-dependent dna helicase vs. nr
Match: gi|399160374|gb|AFP30937.1| (ATP-dependent DNA helicase recQ [Marinobacter sp. BSs20148])

HSP 1 Score: 362.844 bits (930), Expect = 1.075e-117
Identity = 195/365 (53.42%), Postives = 230/365 (63.01%), Query Frame = 0

Query:    6 SPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKG---------------IEQLL------------------------NFINENHA------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            +P++VL E FGY SFR LQ ++V+ +C GG ALVLMPTGGGKSLCYQVPALVR G  IVVSPLIALMQDQV  L++ GV AAFLNS++  + A+A    +  G L LLY APERL+ P T+ LLH   IALFAIDEAHCVSQWGHDFR +Y QLS LA+ FPD+PR+ALTATAD++TR +I  RL L     +I  FDRPNIQY               I+T H+G                 +LL                         F+ E+              D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E    ND  +R+E  KL+AMLGL
Sbjct:   87 TPEQVLHEVFGYDSFRPLQEDIVKELCAGGDALVLMPTGGGKSLCYQVPALVRPGTGIVVSPLIALMQDQVNALKELGVRAAFLNSTMDFEQARATEYALMSGELDLLYCAPERLIQPRTIELLHNTSIALFAIDEAHCVSQWGHDFRSDYLQLSMLAQTFPDIPRIALTATADERTRKEIAERLSLTQARHFISGFDRPNIQYRITPKINANKQLLDFIKTEHEGDCGIVYCLSRKKVDATAKLLQSKGYNALPYHAGLAADERASNQNRFLREDSIIIVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLETSQGNDHFKRIERQKLDAMLGL 451

[Close]

BLAST of atp-dependent dna helicase vs. nr
Match: gi|500108921|ref|WP_011784926.1| (DNA helicase RecQ [Marinobacter hydrocarbonoclasticus] >gi|120324209|gb|ABM18524.1| ATP-dependent DNA helicase RecQ [Marinobacter hydrocarbonoclasticus VT8])

HSP 1 Score: 360.918 bits (925), Expect = 1.141e-117
Identity = 193/365 (52.88%), Postives = 234/365 (64.11%), Query Frame = 0

Query:    6 SPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKG---------------IEQLLN------------------------FINENHA------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            +P++VL E FGY+SFR LQG++V+ + +GG ALVLMPTGGGKSLCYQVPALVR G  IV+SPLIALMQDQV  L++ GV AAFLNS++  + A+A    +  G L LLY APERL+ P T+ LLH   ++LFAIDEAHCVSQWGHDFR +Y QLS LA++FP +PR+ALTATAD++TR +I  RL L +   +I  FDRPNIQY               I+  H+G                 QLL+                        F+ E+              D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E    NDQ +RVE  KL+AMLGL
Sbjct:   21 NPEQVLHEVFGYESFRPLQGDIVREVVNGGDALVLMPTGGGKSLCYQVPALVRPGTAIVISPLIALMQDQVAALRELGVKAAFLNSTMDFEQARATEYALATGELDLLYCAPERLIQPRTIELLHNASLSLFAIDEAHCVSQWGHDFRSDYLQLSMLAQEFPGIPRIALTATADERTRKEIAERLSLTNARHFISGFDRPNIQYRITPKTNANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAQLLSSKGYTALPYHAGLSAEDRARNQERFLREDGVIVVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLEASQGNDQFKRVERQKLDAMLGL 385

[Close]

BLAST of atp-dependent dna helicase vs. nr
Match: gi|1223953987|ref|WP_091985287.1| (DNA helicase RecQ [Marinobacter gudaonensis] >gi|1097525922|emb|SFR39263.1| ATP-dependent DNA helicase RecQ [Marinobacter gudaonensis])

HSP 1 Score: 358.992 bits (920), Expect = 7.951e-117
Identity = 194/364 (53.30%), Postives = 229/364 (62.91%), Query Frame = 0

Query:    7 PQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKGIEQLLNFINEN-------------------HA--------------------------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            P++VL E FGY++FR LQG++V+ +  G  ALVLMPTGGGKSLCYQVPALVR G  IV+SPLIALMQDQV  L + GV AAFLNS++  + A+A    +  G L LLY APERL+ P TL LLH   IALFAIDEAHCVSQWGHDFR +Y QLS LA+ FPDVPR+ALTATAD++TR +I  RL L     +I  FDRPNIQY               I+  H+G   ++  ++ N                   HA                                D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E+   NDQ +RVE  KL+AMLGL
Sbjct:   26 PEQVLHEIFGYETFRPLQGDIVREVVAGRDALVLMPTGGGKSLCYQVPALVRPGTAIVISPLIALMQDQVAALNELGVRAAFLNSTMDFEQARATEYALMTGELDLLYCAPERLIQPRTLELLHNASIALFAIDEAHCVSQWGHDFRSDYLQLSLLADAFPDVPRIALTATADERTRKEIAERLSLTSARHFISGFDRPNIQYRISPKTNANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAKALAQKGYTALPYHAGLSADERARHQERFLREDGVIIVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLESSQGNDQFKRVERQKLDAMLGL 389

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BLAST of atp-dependent dna helicase vs. nr
Match: gi|1061380231|ref|WP_069183631.1| (DNA helicase RecQ [Marinobacter adhaerens] >gi|1061079247|gb|ODM32437.1| ATP-dependent DNA helicase RecQ [Marinobacter adhaerens])

HSP 1 Score: 358.607 bits (919), Expect = 9.418e-117
Identity = 191/369 (51.76%), Postives = 232/369 (62.87%), Query Frame = 0

Query:    2 TTPLSPQKVLEETFGYQSFRGLQGEVVQHICDGGSALVLMPTGGGKSLCYQVPALVREGLTIVVSPLIALMQDQVQNLQQNGVAAAFLNSSLSQQAAQAVLEDVRQGGLRLLYMAPERLLMPATLNLLHTLKIALFAIDEAHCVSQWGHDFRPEYAQLSQLAEQFPDVPRLALTATADDQTRADIKARLQLFDHPEYIDSFDRPNIQYH--------------IQTRHKGIEQLLNFINEN-------------------HA--------------------------------DRPDVRFVAHFDLPKSIEAYYQETGRAGRDGLPSTVWMGYGLQDAITLRQMMENGSNNDQ-RRVEHHKLEAMLGL 304
            T+   P++VL E FGY+SFR LQG++++ + +G  ALVLMPTGGGKSLCYQVPALVR G  IV+SPLIALMQDQV  L++ GV AAFLNS++  + A+A    +  G L LLY APERL+ P T+ LLH   I+LFAIDEAHCVSQWGHDFR +Y QLS L+EQFP VPR+ALTATAD++TR +I  RL L     ++  FDRPNIQY               I+  H+G   ++  ++ N                   HA                                D+PDVRFVAH DLPKS+EAYYQETGRAGRDG PST WM YGLQD I LRQM+E+   ND  +RVE  KL+AMLGL
Sbjct:   17 TSGRDPEQVLHEVFGYESFRPLQGDIIREVSEGRDALVLMPTGGGKSLCYQVPALVRSGTAIVISPLIALMQDQVAALKELGVRAAFLNSTMDFEQARATEYALMTGELDLLYCAPERLIQPRTIELLHDASISLFAIDEAHCVSQWGHDFRSDYLQLSMLSEQFPGVPRIALTATADERTRKEIAERLSLTGARHFVSGFDRPNIQYRIAPKTNANKQLLDFIKAEHEGDCGIVYCLSRNKVDATAKTLAQKGYTALPYHAGLSSEQRAHHQERFLREDGVIIVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLESSQGNDHFKRVERQKLDAMLGL 385

The following BLAST results are available for this feature:

BLAST of atp-dependent dna helicase vs. L. salmonis genes
BLAST of atp-dependent dna helicase vs. SwissProt
BLAST of atp-dependent dna helicase vs. nr

BLAST of atp-dependent dna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 4


Match Name	E-value	Identity	Description
EMLSAG00000003002	2.878e-60	32.80	supercontig:LSalAtl2s:LSalAtl2s170:674355:677674:-...	[more]
EMLSAG00000001573	4.175e-43	41.31	supercontig:LSalAtl2s:LSalAtl2s1271:90201:96916:-1...	[more]
EMLSAG00000001248	1.254e-31	40.21	supercontig:LSalAtl2s:LSalAtl2s1202:153682:156705:...	[more]
EMLSAG00000001574	6.025e-20	32.18	supercontig:LSalAtl2s:LSalAtl2s1271:98605:106214:1...	[more]

BLAST of atp-dependent dna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|19859341\|sp\|P40724.3\|RECQ_SALTY	1.393e-83	43.58	RecName: Full=ATP-dependent DNA helicase RecQ	[more]
gi\|54041622\|sp\|P15043.5\|RECQ_ECOLI	2.759e-76	55.45	RecName: Full=ATP-dependent DNA helicase RecQ	[more]
gi\|2500112\|sp\|P71359.1\|RECQ_HAEIN	2.821e-71	53.24	RecName: Full=ATP-dependent DNA helicase RecQ	[more]
gi\|18202817\|sp\|Q9CL21.1\|RECQ_PASMU	2.793e-68	52.31	RecName: Full=ATP-dependent DNA helicase RecQ	[more]
gi\|75334309\|sp\|Q9FT74.1\|RQL1_ARATH	4.315e-57	35.26	RecName: Full=ATP-dependent DNA helicase Q-like 1;...	[more]
gi\|75329797\|sp\|Q8L840.1\|RQL4A_ARATH	6.594e-57	36.96	RecName: Full=ATP-dependent DNA helicase Q-like 4A...	[more]
gi\|75334305\|sp\|Q9FT70.1\|RQL4B_ARATH	9.406e-57	37.28	RecName: Full=ATP-dependent DNA helicase Q-like 4B...	[more]
gi\|1710074\|sp\|P50729.1\|RECS_BACSU	1.837e-55	36.81	RecName: Full=Probable ATP-dependent DNA helicase ...	[more]
gi\|81910891\|sp\|Q6AYJ1.1\|RECQ1_RAT	1.292e-53	33.71	RecName: Full=ATP-dependent DNA helicase Q1; AltNa...	[more]
gi\|75334307\|sp\|Q9FT72.1\|RQL3_ARATH	1.696e-53	45.28	RecName: Full=ATP-dependent DNA helicase Q-like 3;...	[more]

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BLAST of atp-dependent dna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|648532199\|ref\|WP_026223950.1\|	5.985e-119	53.70	DNA helicase RecQ [Marinobacter lipolyticus]	[more]
gi\|753899603\|ref\|WP_041635222.1\|	1.946e-118	53.42	MULTISPECIES: DNA helicase RecQ [Marinobacter] >gi...	[more]
gi\|550783702\|gb\|ERS81674.1\|	4.954e-118	52.88	ATP-dependent DNA helicase RecQ [Marinobacter sp. ...	[more]
gi\|1274486522\|ref\|WP_099616266.1\|	6.662e-118	51.76	DNA helicase RecQ [Marinobacter guineae] >gi\|12702...	[more]
gi\|665842445\|ref\|WP_031210562.1\|	6.866e-118	52.88	DNA helicase RecQ [Marinobacter sp. EVN1]	[more]
gi\|496224307\|ref\|WP_008938342.1\|	9.018e-118	53.42	DNA helicase RecQ [Marinobacter santoriniensis] >g...	[more]
gi\|399160374\|gb\|AFP30937.1\|	1.075e-117	53.42	ATP-dependent DNA helicase recQ [Marinobacter sp. ...	[more]
gi\|500108921\|ref\|WP_011784926.1\|	1.141e-117	52.88	DNA helicase RecQ [Marinobacter hydrocarbonoclasti...	[more]
gi\|1223953987\|ref\|WP_091985287.1\|	7.951e-117	53.30	DNA helicase RecQ [Marinobacter gudaonensis] >gi\|1...	[more]
gi\|1061380231\|ref\|WP_069183631.1\|	9.418e-117	51.76	DNA helicase RecQ [Marinobacter adhaerens] >gi\|106...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1_size3401120	supercontig	scaffold1_size3401120:2660947..2662053 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:DNA metabolic process

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold1_size3401120-snap-gene-26.42-mRNA-1	maker-scaffold1_size3401120-snap-gene-26.42-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1_size3401120:2660947..2662053-

gene from alignment at scaffold1_size3401120:2660947..2662053-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1_size3401120-snap-gene-26.42 ID=maker-scaffold1_size3401120-snap-gene-26.42|Name=atp-dependent dna helicase|organism=Tigriopus kingsejongensis|type=gene|length=1107bp|location=Sequence derived from alignment at scaffold1_size3401120:2660947..2662053- (Tigriopus kingsejongensis)
ATGACTACACCCCTCAGTCCGCAAAAAGTACTGGAAGAAACGTTCGGCTA
TCAGTCCTTTCGCGGGTTGCAAGGCGAAGTTGTGCAACATATCTGCGACG
GCGGGAGCGCCTTAGTTTTAATGCCAACGGGTGGCGGTAAGAGCTTGTGT
TATCAGGTACCAGCGTTAGTGCGCGAGGGCTTGACGATAGTGGTGTCTCC
CTTGATCGCGCTAATGCAAGATCAGGTGCAAAACCTCCAGCAAAATGGCG
TGGCTGCGGCTTTTCTCAACTCCAGCCTATCGCAACAAGCCGCACAAGCC
GTTTTAGAAGACGTGCGCCAAGGCGGACTGAGATTGCTGTATATGGCGCC
GGAGCGGCTGCTTATGCCAGCAACACTGAATCTTTTACACACTTTAAAAA
TCGCGCTCTTTGCAATAGACGAAGCGCATTGTGTCTCTCAATGGGGACAC
GACTTTCGACCCGAGTACGCGCAGCTGAGCCAGCTCGCCGAACAGTTCCC
CGACGTGCCACGACTCGCCTTGACCGCTACGGCAGACGATCAAACACGAG
CTGATATCAAAGCACGCCTGCAGTTGTTTGATCACCCGGAGTACATCGAC
AGCTTTGATCGACCGAATATTCAATACCACATCCAGACCCGCCACAAAGG
TATTGAGCAACTGCTGAATTTCATCAATGAAAATCATGCGGGTGATACAG
GCATTGTGTATTGCTTGAGCCGTCGCAAAGTAGAGGATACCGCCGTCAAG
CTGGCCAAAGCCGGATTCAATGCACTGCCTTATCACGCAGGCATGGAATC
AGAAATTCGCGCGATCTACCTGCGCCGATTTCTGCACGAAGACCCGATTA
TCATCGTCGCCACCGTGGCCTTTGGCATGGGCATAGACAGGCCAGATGTA
CGTTTTGTCGCACATTTTGACCTACCCAAAAGCATCGAGGCCTATTACCA
AGAGACCGGTCGTGCCGGACGCGACGGACTGCCCTCCACTGTCTGGATGG
GCTACGGACTACAAGACGCGATCACCCTGCGCCAAATGATGGAAAACGGC
AGCAACAACGATCAGCGTCGTGTGGAACACCACAAGTTAGAGGCCATGCT
AGGCCTG

Synonyms

The feature 'atp-dependent dna helicase' has the following synonyms


Synonym
Tk04933

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