abc transporter, maker-scaffold1_size3401120-snap-gene-6.39 (gene) Tigriopus kingsejongensis

Overview


Name	abc transporter
Unique Name	maker-scaffold1_size3401120-snap-gene-6.39
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000736 (supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 gene:EMLSAG00000000736 transcript:EMLSAT00000000736 description:"augustus_masked-LSalAtl2s1118-processed-gene-0.6")

HSP 1 Score: 92.0485 bits (227), Expect = 4.866e-23
Identity = 64/176 (36.36%), Postives = 92/176 (52.27%), Query Frame = 0

Query:    2 PLHLMSLADLSKTYSTGH---TALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTR------SAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLE-KLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            P   +S+    K++  G      L  +++ I KG I  LLGP+G+GKTTL+  + G  +  SGS++V G      Y  T+        +G +PQ+L +    T+  T+ F   +F MPK       K L +L    KK  ++  LSGG +RR  +A AL HEP +L LDEPT GVD
Sbjct:   23 PRAAISVKGAYKSFGWGKKKVNVLVNLSIRITKGHIYGLLGPSGSGKTTLLQCVIGKQSLDSGSILVFGE-----YPGTKDLGVPGKRVGYMPQDLAMYMELTIMETLEFYGRIFNMPKAKIKKRAKFLVELLELPKKKILIQKLSGGHQRRASLAVALLHEPDLLILDEPTVGVD 193

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001342 (supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 gene:EMLSAG00000001342 transcript:EMLSAT00000001342 description:"snap_masked-LSalAtl2s1226-processed-gene-0.1")

HSP 1 Score: 90.8929 bits (224), Expect = 1.129e-21
Identity = 67/177 (37.85%), Postives = 92/177 (51.98%), Query Frame = 0

Query:    2 PLHLMSLADLSKTYSTG---HTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITD-GYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDP--AYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            P  +++L D  K Y      +  L  + L I +G I  LLG +G GKTT++S I G    + G V V G S  D G     + IG +PQE+ L    TV  T+ +   L+ M  D     ++ +LK L +   +D ++  LSGG KRRV  A AL H+P +  LDEPT GVD  L K
Sbjct:   23 PRIVVALRDACKYYGKNAMENRVLNNLNLTITEGSIYGLLGASGCGKTTVLSCIVGRKKLNKGQVTVFGGSPGDKGIGIPGNRIGYMPQEIALYKEFTVRETLKYFGRLYEMETDQIDQRIDFILKFLQITRDRD-MVGKLSGGQKRRVSFAAALLHDPELYILDEPTVGVDPRLRK 198

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000074 (supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 gene:EMLSAG00000000074 transcript:EMLSAT00000000074 description:"augustus_masked-LSalAtl2s100-processed-gene-0.5")

HSP 1 Score: 82.0333 bits (201), Expect = 1.296e-18
Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 0

Query:   24 GVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSI-TDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMP--KDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAKF 173
            G+ + + KG I  LLGP+G GKTTL+ +I G    +SG   + G    T G       IG +PQ+L L    T+  T+ F   L  M   K  +  E L++ L L      ++ ++SGG +RR+ +A AL HEP +L LDEPT GVD  L ++
Sbjct:   44 GLNMSVPKGVIYGLLGPSGCGKTTLLRVITGREKLNSGEFKIFGEDPGTVGLEVPGRRIGYMPQDLALYMELTILETLFFYGRLNKMQTSKIRSRAETLIEILEL-PHSGRLVQNMSGGQRRRISLAVALLHEPELLVLDEPTVGVDPVLRQY 195

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 72.7886 bits (177), Expect = 1.916e-15
Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 0

Query:   22 LQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRH-TRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWD-------KKDNILMH----LSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            L G++ + + G+ LAL+GP+G GK+T+I +I    + S G V +DG  IT    H  RS IG+V QE  L  +    N    + GL G   +   ++   K  + +D       K D I+      LSGG K+R+ IA+AL   P +L LDE ++ +D
Sbjct:  263 LSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKEN---ITMGLQGEISEKM-IDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALD 416

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 67.0106 bits (162), Expect = 2.187e-13
Identity = 57/180 (31.67%), Postives = 87/180 (48.33%), Query Frame = 0

Query:    6 MSLADLSKTYSTG-HTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITD-GYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLS-------LWDKKDNILMH-------LSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVE 169
            +S  + S  Y  G    L+ V+LDI  GE + ++G  GAGK++    +  I+   +G++I+DG  IT  G    RS I ++PQ       D V  + S  R L   P D      +++ +S       +   KD +  H       LS G ++ + +A+AL    RVL LDE TA VD+E
Sbjct: 1320 ISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQ-------DPVLFSGSLRRNL--DPLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLE 1490

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 65.4698 bits (158), Expect = 7.030e-13
Identity = 49/165 (29.70%), Postives = 87/165 (52.73%), Query Frame = 0

Query:   21 ALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHT-RSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKD--------PAYLEKLLKQLSLWDKKDNILM----HLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
             L+ + + I+ G+ + ++G  G+GK+TL   +  ++  +SG + +DG  I     HT RS + ++PQ+ TL +      T+  +   FG+ KD         AYL+  LK+    D  D ++     ++S G ++ + +A+AL  + +VL +DE TA VD E  K
Sbjct: 1767 VLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFS-----GTLRLNLDPFGLFKDMELIESLKHAYLQDFLKE----DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDK 1922

HSP 2 Score: 60.4622 bits (145), Expect = 4.321e-11
Identity = 43/166 (25.90%), Postives = 82/166 (49.40%), Query Frame = 0

Query:   19 HTALQGVTLDIAKGEILALLGPNGAGKTTLISIICG-IVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNIL-----------MHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
             +  + +++D+ +G ++A++GP G+GK++LIS + G ++  S G+  V+ H           ++   PQ   +       N       LFG   +  + +++LK  SL    +              ++LSGG K+R+ +A+A+  +  + FLD+P A VD  +AK
Sbjct: 1161 ESLFKDISMDVNRGNLIAIIGPVGSGKSSLISALLGEMLFTSKGTNPVEIHG----------SVAYTPQNAWMQNVSVKDNI------LFGRKFNKNWYDEVLKACSLESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAK 1310

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25")

HSP 1 Score: 61.2326 bits (147), Expect = 2.025e-11
Identity = 51/177 (28.81%), Postives = 88/177 (49.72%), Query Frame = 0

Query:    4 HLMSLADLSKTYST--GHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTV----SFSRGLFGMPKDPAYLEKLLKQLSLWDKKD--NILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            H + + ++S ++ T  G   L+ + LDI KG ++A++G  G+GK++L+S I G +    GS+ VDG +I              PQ+  L   +T+ N +     F++ L+    D   L   L  L   D  +     ++LSGG K RV +A+   +   +  LD+P + VDV + +
Sbjct:  615 HAVKMCNVSLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTI------------YAPQQPWLQN-ETLRNNILFGKRFNKKLYRRVIDACALSPDLDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGR 778

HSP 2 Score: 59.6918 bits (143), Expect = 6.662e-11
Identity = 46/171 (26.90%), Postives = 81/171 (47.37%), Query Frame = 0

Query:   21 ALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITD-GYRHTRSAIGLVPQE---------LTLGAFDT-----VWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILM-------HLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVE 169
             L+G+   I KGE + ++G  GAGK++L   +  I+  S GS+ +DG +I   G    RS I ++PQ+         + L  F+      +W  + +S                LK   +W+  D +         +LS G ++ + +A+A+  + ++L LDE TA +D+E
Sbjct: 1296 VLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNLDPFEAFADRDIWIALEYSH---------------LKSF-VWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLE 1450

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4")

HSP 1 Score: 59.6918 bits (143), Expect = 5.795e-11
Identity = 52/184 (28.26%), Postives = 87/184 (47.28%), Query Frame = 0

Query:   13 KTYSTGHTA-----LQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSI-TDGYRHTRSAIGLVPQELTL------------GAFD--TVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNIL-------MHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVE 169
            K YS  + A     L+ +   I  GE + ++G  GAGK++L   +  IV A++G +++DG  I T G    R ++ ++PQE  L             AF    +WNT+              +L++ ++     D KD +        ++LS G ++ + +A+AL    ++L LDE TA VD E
Sbjct: 1162 KNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNLDPENAFSDHDIWNTLG-----------SVHLKEYIR-----DLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWE 1329

HSP 2 Score: 58.151 bits (139), Expect = 2.152e-10
Identity = 47/165 (28.48%), Postives = 75/165 (45.45%), Query Frame = 0

Query:   19 HTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLK------QLSLWDKKDNIL-----MHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
               L  + L I  G + A++G  G+GK++LIS I G +   SG V + G             I  VPQE  +       NT   +  LFG P D  +  ++L+       LSL    D        ++LSGG ++R+ +A+A+  +  V   D P + +D ++ K
Sbjct:  568 ENTLSNINLRIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRIKGQ------------IAYVPQESWMQ------NTSLKNNILFGKPYDEEWYNQVLEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGK 714

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001122 (supercontig:LSalAtl2s:LSalAtl2s118:125434:135666:1 gene:EMLSAG00000001122 transcript:EMLSAT00000001122 description:"maker-LSalAtl2s118-snap-gene-1.28")

HSP 1 Score: 59.3066 bits (142), Expect = 7.454e-11
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 0

Query:   10 DLSKTY-STGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTL 90
            +LSK Y    ++A+  ++  + +GE   LLG NGAGKTT   ++ G +N +SG   ++G+SI +     R ++G  PQE  L
Sbjct:  431 ELSKRYWRQKNSAVDKLSFGVRRGECFGLLGINGAGKTTTFKMLTGDINPTSGDAFINGYSIFNEMGRCRQSLGYCPQEDAL 512

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 56.6102 bits (135), Expect = 6.849e-10
Identity = 41/178 (23.03%), Postives = 83/178 (46.63%), Query Frame = 0

Query:    6 MSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHT-RSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNIL---------------MHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            ++  D+   Y+       G++  +  G+ +A++G +G+GK+TL+ ++        GS+ +  ++I +    + R  I +VPQ+  L   DT+++ + +  G      +  Y    L ++      DN +               + LSGG K+RV IA+A   +  ++  DE T+ +D
Sbjct:  364 ITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFN-DTIFHNIKY--GNLNCSDEDVYKVAKLAEI------DNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLD 532

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BLAST of abc transporter vs. SwissProt
Match: gi|123724457|sp|Q2JLH7.1|PHNC2_SYNJB (RecName: Full=Phosphonates import ATP-binding protein PhnC 2)

HSP 1 Score: 103.219 bits (256), Expect = 8.356e-26
Identity = 68/179 (37.99%), Postives = 102/179 (56.98%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSI----TDGYRHTRSAIGLVPQELTLGAFDTVWNT--------VSFSRGLF-GMPK---DPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            ++ +  LSK Y TG  AL+GVTL++  G+++AL+GP+GAGK+TL+  I  +V  +SGS+ ++G  +    T   R  R  IG++ QE  L    TV           V+F +  F   P+   D A+  +LL ++ L D  D     LSGG ++RV IA+AL   P +L +DEPTA +D
Sbjct:    1 MLRIDSLSKRYPTGDMALKGVTLEVPDGQVMALIGPSGAGKSTLLRCINRLVEPTSGSIWLNGIDLTRLNTRELRQARRKIGMIFQEYALVERLTVMENVLSGQLGYVNFWQSWFRKFPQATIDEAF--RLLDRVGLSDFPDKRADALSGGQRQRVGIARALLQNPELLLVDEPTASLD 177

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BLAST of abc transporter vs. SwissProt
Match: gi|81836221|sp|Q7VV72.1|METN_BORPE (RecName: Full=Methionine import ATP-binding protein MetN >gi|81836507|sp|Q7W4E1.1|METN_BORPA RecName: Full=Methionine import ATP-binding protein MetN >gi|81836868|sp|Q7WFU9.1|METN_BORBR RecName: Full=Methionine import ATP-binding protein MetN)

HSP 1 Score: 104.76 bits (260), Expect = 1.175e-25
Identity = 63/174 (36.21%), Postives = 101/174 (58.05%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGH---TALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITD----GYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKD--PAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVE 169
            ++ + +LSKTY+T H    AL+G+ L I +GE+  ++GP+GAGK+TL+  I  +     GS+ + G ++        R+ R  IG+V Q   L A  TV+  V+    + G+ +   PA +E+LL  + L   +D     +SGG K+RV IA+AL+++P VL  DE T+ +D E
Sbjct:    1 MIHIENLSKTYATPHGRFEALRGINLHIQQGEVFGIIGPSGAGKSTLVQCINLLERPDQGSIAIGGQALVGLGEAQLRNQRRRIGMVFQGFNLLARRTVYGNVALPLEIAGVARAEIPARVERLLALVGLEHLRDRYPSQISGGQKQRVGIARALANDPDVLLSDEATSALDPE 174

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BLAST of abc transporter vs. SwissProt
Match: gi|122973014|sp|Q16BJ3.1|TAUB_ROSDO (RecName: Full=Taurine import ATP-binding protein TauB)

HSP 1 Score: 102.834 bits (255), Expect = 1.223e-25
Identity = 59/151 (39.07%), Postives = 94/151 (62.25%), Query Frame = 0

Query:   21 ALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSIT--DGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPK--DPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            ALQ V+LD+  GE+L++LGP+G GKTTL++I+ G +  +SG +I++GH IT  D  R      G+V Q+  L  + +V   V+F   + G PK      ++ LL  + L D K+  +  LSGGM++RV +A+ L+++P V+ +DEP   +D
Sbjct:   23 ALQDVSLDLKAGELLSVLGPSGCGKTTLLNIVAGFLAPTSGELILNGHRITGPDAER------GMVFQQGALFEWMSVRENVAFGPSMKGTPKVDKDKTVDHLLDVVGLQDFKEKAVYELSGGMQQRVALARCLANDPDVILMDEPLGALD 167

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BLAST of abc transporter vs. SwissProt
Match: gi|152031909|sp|A3CVD3.1|ECFA_METMJ (RecName: Full=Energy-coupling factor transporter ATP-binding protein EcfA; Short=ECF transporter A component EcfA)

HSP 1 Score: 102.834 bits (255), Expect = 1.379e-25
Identity = 64/169 (37.87%), Postives = 94/169 (55.62%), Query Frame = 0

Query:    3 LHLMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSIT-DGYRHTRSAIGLVPQELTLGAFD-TVWNTVSFSRGLFGMPKDPA--YLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            +HL+   DL+  Y     AL+GV     +   +A++GPNGAGK+TL     GI+  +SG V+V G  IT +  R  R  +G+V Q      F  TV   ++F     G+ +      +E+ L  L + + ++ +  HLSGG K+RV IA  L+ EP+VL LDEPTAG+D
Sbjct:    1 MHLLETRDLTHIYRGDVHALEGVNFTAERKSRIAVIGPNGAGKSTLFKHFNGILKPTSGEVLVRGEPITKENVREVRKFVGIVFQNPDDQIFSPTVEQDIAFGPINLGLDEATVAHRVEEALHLLGIEELRERVPHHLSGGEKKRVAIAGILAMEPQVLVLDEPTAGLD 169

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BLAST of abc transporter vs. SwissProt
Match: gi|81766800|sp|Q8XIZ5.1|POTA_CLOPE (RecName: Full=Spermidine/putrescine import ATP-binding protein PotA >gi|123049692|sp|Q0TNZ3.1|POTA_CLOP1 RecName: Full=Spermidine/putrescine import ATP-binding protein PotA)

HSP 1 Score: 103.99 bits (258), Expect = 1.737e-25
Identity = 63/171 (36.84%), Postives = 100/171 (58.48%), Query Frame = 0

Query:    4 HLMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKD--PAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            +++ L  ++K+Y    T L  ++L+I K E L LLGP+G GKTT + II G   A SG V+ + + I D   + R  +  V Q+  L     V+  ++F   L  MPKD     ++++LK ++L   ++  +  LSGG ++RV IA+AL +EP+VL LDEP   +D++L K
Sbjct:    5 NIIELKGITKSYGK-DTILDNLSLNIKKNEFLTLLGPSGCGKTTTLKIIAGFETADSGQVVFENNIINDIPPYERQ-LNTVFQKYALFPHMNVYENIAFGLKLKKMPKDVIDQKVKEMLKLVALEGYENRDIEALSGGQQQRVAIARALVNEPKVLLLDEPLGALDMKLRK 173

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BLAST of abc transporter vs. SwissProt
Match: gi|81837521|sp|Q81IZ6.1|METN1_BACCR (RecName: Full=Methionine import ATP-binding protein MetN 1)

HSP 1 Score: 103.605 bits (257), Expect = 2.318e-25
Identity = 61/174 (35.06%), Postives = 99/174 (56.90%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHT---ALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSIT----DGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDP--AYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVE 169
            ++ L ++SK ++T      AL+  +L + KGE+  ++G +GAGK+TLI  +  +   ++G++IV+   +T          R  IG++ Q   L    TV+  ++    L G+PK      +EK L+ + L+++KD     LSGG K+RV IA+ALSHEP VL  DE T+ +D E
Sbjct:    1 MIELKNVSKVFTTKKVNVEALKSTSLQVKKGEVFGIIGYSGAGKSTLIRCVNLLEKPTTGNIIVNNQDLTTLSAKELAKARQKIGMIFQGFNLLKTVTVYENIALPLRLAGIPKTEIEKRVEKYLRIVDLFNRKDAYPSELSGGQKQRVAIARALSHEPEVLLSDEATSALDPE 174

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|122978951|sp|Q1BWI2.1|NODI_BURCA (RecName: Full=Nod factor export ATP-binding protein I; AltName: Full=Nodulation ATP-binding protein I)

HSP 1 Score: 102.834 bits (255), Expect = 2.330e-25
Identity = 62/165 (37.58%), Postives = 92/165 (55.76%), Query Frame = 0

Query:    6 MSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGA-FDTVWNTVSFSRGLFGMPKDP--AYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            +   ++ K Y      + G++  +  GE   LLGPNGAGKTT + ++ G+ +  +G++ + G  +    RH R  +G+VPQ   L   F    N + FSR  FGM      A +  LL+   L +K D  +  LSGGMKRR+ +A+AL ++P VL LDEPT G+D
Sbjct:    6 IDFRNVEKRYGD-KLVVNGLSFSVKVGECYGLLGPNGAGKTTTLKMLLGLAHPDAGTISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFSR-YFGMSAQAARALVAPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLD 168

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|23396743|sp|Q9CK97.1|METN_PASMU (RecName: Full=Methionine import ATP-binding protein MetN)

HSP 1 Score: 103.605 bits (257), Expect = 2.524e-25
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGH---TALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITD----GYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAY--LEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            ++ L  +SK +       TAL  V+L + KG+I  ++G +GAGK+TLI  +  +   SSG+VIVDG  +T        H R  IG++ Q   L    TV+  ++    L   PK+  +  + +LL  + L DKKD    +LSGG K+RV IA+AL+ EP+VL  DE T+ +D
Sbjct:    1 MIKLEKISKIFDVSGKKLTALDNVSLHVPKGQICGVIGASGAGKSTLIRCVNLLETPSSGAVIVDGKDLTQLKNADLVHERRHIGMIFQHFNLLTSRTVFGNIALPLELENTPKEKIHQKVNELLALVGLTDKKDAYPSNLSGGQKQRVAIARALASEPKVLLCDEATSALD 172

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|122956905|sp|Q0SWH9.1|ECFA2_CLOPS (RecName: Full=Energy-coupling factor transporter ATP-binding protein EcfA2; Short=ECF transporter A component EcfA2)

HSP 1 Score: 102.064 bits (253), Expect = 3.129e-25
Identity = 64/173 (36.99%), Postives = 96/173 (55.49%), Query Frame = 0

Query:    1 MPLHLMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSIT---DGYRHTRSAIGLVPQELTLGAFD-TVWNTVSFSRGLFGMPKDP--AYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVD 167
            M  +++ + +L+  YS G  AL+G+ ++I +GE+ A+LG NG GK+TL     GI+  SSG ++ D   I     G    R +IG+V Q+     F  +V+  VSF      +P+D     ++  LK+  +   K+     LS G K+RV IA  L  EP+VL LDEPTAG+D
Sbjct:    1 MEDYILKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHLKNKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLD 173

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|122064379|sp|Q2KVK2.1|METN_BORA1 (RecName: Full=Methionine import ATP-binding protein MetN)

HSP 1 Score: 103.219 bits (256), Expect = 3.389e-25
Identity = 63/174 (36.21%), Postives = 100/174 (57.47%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGH---TALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITD----GYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKD--PAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVE 169
            ++ + +LSKTY+T H    AL+G+ L I +GE+  ++GP+GAGK+TL+  I  +     GS+ + G  +T       R  R  IG+V Q   L +  TV+  V+    + G+P+   P  +E+LL  + L   +D     +SGG K+RV IA+AL+++P VL  DE T+ +D E
Sbjct:    1 MIHIKNLSKTYATPHGRFEALRGIDLLIEQGEVFGIIGPSGAGKSTLVQCINLLERPDQGSISIGGQELTGLSEAQLRGQRRRIGMVFQGFNLLSRRTVYGNVALPLEIAGVPRQEIPGKVERLLALVGLEHLRDRYPSQISGGQKQRVGIARALANDPDVLLSDEATSALDPE 174

[Close]

BLAST of abc transporter vs. nr
Match: gi|931402809|gb|KPJ91173.1| (multidrug ABC transporter ATP-binding protein [Gammaproteobacteria bacterium SG8_11])

HSP 1 Score: 259.996 bits (663), Expect = 7.500e-84
Identity = 129/168 (76.79%), Postives = 143/168 (85.12%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S+A+LSKTY+ G+ AL+ V LDI  GEILALLGPNGAGKTTLISIICGIVNAS+GSV V G  I   YR TRS IGLVPQELTLGAFD VWNT+ FSRGLFG   DP+YLE+LLK LSLWDKK+N+LM LSGGMKRRVLI KAL+HEP VLFLDEPTAGVDVEL K
Sbjct:    4 IVSIANLSKTYAGGYQALKNVNLDIQPGEILALLGPNGAGKTTLISIICGIVNASAGSVTVGGRDIVSDYRVTRSMIGLVPQELTLGAFDRVWNTLCFSRGLFGKKPDPSYLEQLLKDLSLWDKKNNMLMALSGGMKRRVLIGKALAHEPSVLFLDEPTAGVDVELRK 171

[Close]

BLAST of abc transporter vs. nr
Match: gi|1134196116|ref|WP_076438415.1| (ABC transporter ATP-binding protein [Bosea sp. TND4EK4] >gi|1131963730|emb|SIQ57284.1| ABC-2 type transport system ATP-binding protein [Bosea sp. TND4EK4])

HSP 1 Score: 259.61 bits (662), Expect = 9.617e-84
Identity = 122/166 (73.49%), Postives = 145/166 (87.35%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVEL 170
            ++S+++LSKTY+TG +AL+ V L+I +GEI ALLGPNGAGKTTLISIICG+V  S+G+V+ DGH I D YR  RSAIGLVPQELT  AF+TVW+TVSFSRGLFG PK+PAY+E++LK LSLWDKKD  +  LSGGMKRRVLIAKAL+HEPR+LFLDEPTAGVDVEL
Sbjct:    6 IISVSNLSKTYATGFSALKAVDLEIRQGEIFALLGPNGAGKTTLISIICGLVTPSTGTVLADGHDIRDDYRAARSAIGLVPQELTTDAFETVWSTVSFSRGLFGKPKNPAYIEQVLKDLSLWDKKDTQIRRLSGGMKRRVLIAKALAHEPRILFLDEPTAGVDVEL 171

[Close]

BLAST of abc transporter vs. nr
Match: gi|1235666456|ref|WP_094816647.1| (ABC transporter ATP-binding protein [Bordetella genomosp. 12] >gi|1234248240|gb|OZI72287.1| multidrug ABC transporter ATP-binding protein [Bordetella genomosp. 12])

HSP 1 Score: 259.61 bits (662), Expect = 1.027e-83
Identity = 121/168 (72.02%), Postives = 142/168 (84.52%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S+ DLSK Y++GH AL+ + LDI +GEI ALLGPNGAGKTTLISIICGIVNA+SG V+ DGH     YR  R AIGLVPQELT  AF+TVWNTVSFSRGLFG P +PA +E++L+ LSLWDKKD+ +M LSGGMKRRV+IAKALSHEPR+LFLDEPTAGVDVEL +
Sbjct:    6 VISVQDLSKVYASGHQALKNINLDIQRGEIFALLGPNGAGKTTLISIICGIVNATSGRVLADGHDNVREYRAARQAIGLVPQELTTDAFETVWNTVSFSRGLFGKPANPALVERILRDLSLWDKKDSRIMALSGGMKRRVMIAKALSHEPRILFLDEPTAGVDVELRR 173

[Close]

BLAST of abc transporter vs. nr
Match: gi|1313466411|dbj|GBE42480.1| (daunorubicin/doxorubicin resistance ATP-binding protein DrrA [bacterium BMS3Bbin10])

HSP 1 Score: 259.225 bits (661), Expect = 1.396e-83
Identity = 123/168 (73.21%), Postives = 144/168 (85.71%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S+A+LSKTY  G  AL+G+ LDIA+GEI  LLGPNGAGKTTLI IICGI+N  +GS+ V+GH I   YR TRS IGLVPQELT  AF++VWNTVSFSRGLFG  ++PA++EK+LK+LSLWDKKD  LM+LSGGMKRRVLIAKALSHEPR+LFLDEPTAGVDVEL K
Sbjct:    4 IISIANLSKTYEGGLQALKGINLDIAEGEIFGLLGPNGAGKTTLIGIICGIINPGAGSITVNGHDIVRDYRATRSLIGLVPQELTTDAFESVWNTVSFSRGLFGKSRNPAHIEKVLKELSLWDKKDEKLMNLSGGMKRRVLIAKALSHEPRILFLDEPTAGVDVELRK 171

[Close]

BLAST of abc transporter vs. nr
Match: gi|1196406140|ref|WP_086088417.1| (ABC transporter ATP-binding protein [Pseudorhodoplanes sinuspersici] >gi|1190225423|gb|ARQ00017.1| multidrug ABC transporter ATP-binding protein [Pseudorhodoplanes sinuspersici])

HSP 1 Score: 259.225 bits (661), Expect = 1.413e-83
Identity = 122/168 (72.62%), Postives = 144/168 (85.71%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S+ +LSKTY+TG  AL+ + LDI +GEI ALLGPNGAGKTTLI IICGIVN S+G V VDGH I D YR  RS IGLVPQELT  +F+TVW TV+FSRGLFG P++PA++EK+LKQLSLW+KKD+ +M LSGGMKRRV+IAKALSHEPR+LFLDEPTAGVDVEL K
Sbjct:    4 VISIQNLSKTYATGFQALKTINLDIRRGEIFALLGPNGAGKTTLIGIICGIVNPSTGKVTVDGHDIVDDYRAARSEIGLVPQELTTDSFETVWATVNFSRGLFGKPRNPAHIEKILKQLSLWEKKDSKIMTLSGGMKRRVMIAKALSHEPRILFLDEPTAGVDVELRK 171

[Close]

BLAST of abc transporter vs. nr
Match: gi|1232291463|gb|OYV76695.1| (multidrug ABC transporter ATP-binding protein [Chromatiales bacterium 21-64-14])

HSP 1 Score: 258.84 bits (660), Expect = 1.748e-83
Identity = 127/168 (75.60%), Postives = 145/168 (86.31%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S+ +LSKTY+ G+ AL+ V+L+I +GEILALLGPNGAGKTTLISIICGIV+AS G+V V GH I  GYR TRS IGLVPQELTLGAFD+VWNT+ FSRGLFG   D AY+E+LLK+LSLWDKKD+ LM LSGGMKRRVLI KALSHEP VLFLDEPTAGVDVEL K
Sbjct:    8 IVSVVNLSKTYANGYQALKNVSLEIERGEILALLGPNGAGKTTLISIICGIVSASGGTVTVGGHDIVTGYRITRSMIGLVPQELTLGAFDSVWNTLCFSRGLFGKKPDHAYIERLLKELSLWDKKDSALMTLSGGMKRRVLIGKALSHEPTVLFLDEPTAGVDVELRK 175

[Close]

BLAST of abc transporter vs. nr
Match: gi|893712479|ref|WP_048940601.1| (ABC transporter ATP-binding protein [Bordetella hinzii] >gi|985539241|gb|KXA72341.1| multidrug ABC transporter ATP-binding protein [Bordetella hinzii LMG 13501])

HSP 1 Score: 259.225 bits (661), Expect = 1.910e-83
Identity = 121/168 (72.02%), Postives = 142/168 (84.52%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S+ DLSK Y++GH AL+ + L+I +GEI ALLGPNGAGKTTLISIICGIVNASSG V+ DGH     YR  R AIGLVPQELT  AF+TVWNTVSFSRGLFG P +PA +E++L+ LSLWDKKD+ +M LSGGMKRRV+IAKALSHEPR+LFLDEPTAGVDVEL +
Sbjct:   15 VISVQDLSKIYASGHQALKNINLEIRRGEIFALLGPNGAGKTTLISIICGIVNASSGRVLADGHDNVKAYRAARQAIGLVPQELTTDAFETVWNTVSFSRGLFGKPANPALIERILRDLSLWDKKDSRIMALSGGMKRRVMIAKALSHEPRILFLDEPTAGVDVELRR 182

[Close]

BLAST of abc transporter vs. nr
Match: gi|625336533|gb|KCB50731.1| (ABC transporter, ATP-binding protein [Bordetella hinzii 1277])

HSP 1 Score: 260.381 bits (664), Expect = 2.001e-83
Identity = 122/168 (72.62%), Postives = 142/168 (84.52%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S+ DLSK Y++GH AL+ + L+I +GEI ALLGPNGAGKTTLISIICGIVNASSG V+ DGH     YR  R AIGLVPQELT  AF+TVWNTVSFSRGLFG P DPA +E++L+ LSLWDKKD+ +M LSGGMKRRV+IAKALSHEPR+LFLDEPTAGVDVEL +
Sbjct:   50 VISVQDLSKIYASGHQALKNINLEIRRGEIFALLGPNGAGKTTLISIICGIVNASSGRVLADGHDNVKAYRAARQAIGLVPQELTTDAFETVWNTVSFSRGLFGKPADPALIERILRDLSLWDKKDSRIMALSGGMKRRVMIAKALSHEPRILFLDEPTAGVDVELRR 217

[Close]

BLAST of abc transporter vs. nr
Match: gi|890877610|gb|AKQ54758.1| (putative ABC transporter ATP-binding protein YbhF [Bordetella hinzii] >gi|1231728447|emb|SNV94560.1| ABC transporter ATP-binding protein [Bordetella hinzii])

HSP 1 Score: 258.455 bits (659), Expect = 2.377e-83
Identity = 121/168 (72.02%), Postives = 142/168 (84.52%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S+ DLSK Y++GH AL+ + L+I +GEI ALLGPNGAGKTTLISIICGIVNASSG V+ DGH     YR  R AIGLVPQELT  AF+TVWNTVSFSRGLFG P +PA +E++L+ LSLWDKKD+ +M LSGGMKRRV+IAKALSHEPR+LFLDEPTAGVDVEL +
Sbjct:    6 VISVQDLSKIYASGHQALKNINLEIRRGEIFALLGPNGAGKTTLISIICGIVNASSGRVLADGHDNVKAYRAARQAIGLVPQELTTDAFETVWNTVSFSRGLFGKPANPALIERILRDLSLWDKKDSRIMALSGGMKRRVMIAKALSHEPRILFLDEPTAGVDVELRR 173

[Close]

BLAST of abc transporter vs. nr
Match: gi|1055722804|ref|WP_067335076.1| (ABC transporter ATP-binding protein [Stappia indica])

HSP 1 Score: 258.455 bits (659), Expect = 2.462e-83
Identity = 126/168 (75.00%), Postives = 143/168 (85.12%), Query Frame = 0

Query:    5 LMSLADLSKTYSTGHTALQGVTLDIAKGEILALLGPNGAGKTTLISIICGIVNASSGSVIVDGHSITDGYRHTRSAIGLVPQELTLGAFDTVWNTVSFSRGLFGMPKDPAYLEKLLKQLSLWDKKDNILMHLSGGMKRRVLIAKALSHEPRVLFLDEPTAGVDVELAK 172
            ++S++ LSKTY TG  AL+ V+LDI KGE+ ALLGPNGAGKTTLISI+CGIVNASSGSV VDG+ I   YR  RS IGLVPQELT  AF+TVW TVSFSRGLFG PK PA +EK+L+ LSLW+KKDN L+ LSGGMKRRVLIAKAL+HEPRVLFLDEPTAGVDVEL +
Sbjct:    4 ILSISGLSKTYDTGFQALKSVSLDIEKGEVFALLGPNGAGKTTLISIVCGIVNASSGSVTVDGNDIVRDYRAARSLIGLVPQELTTDAFETVWATVSFSRGLFGKPKAPAIVEKVLRDLSLWEKKDNKLVTLSGGMKRRVLIAKALAHEPRVLFLDEPTAGVDVELRR 171

The following BLAST results are available for this feature:

BLAST of abc transporter vs. L. salmonis genes
BLAST of abc transporter vs. SwissProt
BLAST of abc transporter vs. nr

BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 16


Match Name	E-value	Identity	Description
EMLSAG00000000736	4.866e-23	36.36	supercontig:LSalAtl2s:LSalAtl2s1118:20544:21383:1 ...	[more]
EMLSAG00000001342	1.129e-21	37.85	supercontig:LSalAtl2s:LSalAtl2s1226:24200:67450:1 ...	[more]
EMLSAG00000000074	1.296e-18	37.91	supercontig:LSalAtl2s:LSalAtl2s100:66414:68636:-1 ...	[more]
EMLSAG00000010048	1.916e-15	34.81	supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1...	[more]
EMLSAG00000002221	2.187e-13	31.67	supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 ...	[more]
EMLSAG00000011700	7.030e-13	29.70	supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 ...	[more]
EMLSAG00000008248	2.025e-11	28.81	supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1...	[more]
EMLSAG00000003611	5.795e-11	28.26	supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 ...	[more]
EMLSAG00000001122	7.454e-11	36.59	supercontig:LSalAtl2s:LSalAtl2s118:125434:135666:1...	[more]
EMLSAG00000003104	6.849e-10	23.03	supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-...	[more]

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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|123724457\|sp\|Q2JLH7.1\|PHNC2_SYNJB	8.356e-26	37.99	RecName: Full=Phosphonates import ATP-binding prot...	[more]
gi\|81836221\|sp\|Q7VV72.1\|METN_BORPE	1.175e-25	36.21	RecName: Full=Methionine import ATP-binding protei...	[more]
gi\|122973014\|sp\|Q16BJ3.1\|TAUB_ROSDO	1.223e-25	39.07	RecName: Full=Taurine import ATP-binding protein T...	[more]
gi\|152031909\|sp\|A3CVD3.1\|ECFA_METMJ	1.379e-25	37.87	RecName: Full=Energy-coupling factor transporter A...	[more]
gi\|81766800\|sp\|Q8XIZ5.1\|POTA_CLOPE	1.737e-25	36.84	RecName: Full=Spermidine/putrescine import ATP-bin...	[more]
gi\|81837521\|sp\|Q81IZ6.1\|METN1_BACCR	2.318e-25	35.06	RecName: Full=Methionine import ATP-binding protei...	[more]
gi\|122978951\|sp\|Q1BWI2.1\|NODI_BURCA	2.330e-25	37.58	RecName: Full=Nod factor export ATP-binding protei...	[more]
gi\|23396743\|sp\|Q9CK97.1\|METN_PASMU	2.524e-25	37.79	RecName: Full=Methionine import ATP-binding protei...	[more]
gi\|122956905\|sp\|Q0SWH9.1\|ECFA2_CLOPS	3.129e-25	36.99	RecName: Full=Energy-coupling factor transporter A...	[more]
gi\|122064379\|sp\|Q2KVK2.1\|METN_BORA1	3.389e-25	36.21	RecName: Full=Methionine import ATP-binding protei...	[more]

Pages

BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|931402809\|gb\|KPJ91173.1\|	7.500e-84	76.79	multidrug ABC transporter ATP-binding protein [Gam...	[more]
gi\|1134196116\|ref\|WP_076438415.1\|	9.617e-84	73.49	ABC transporter ATP-binding protein [Bosea sp. TND...	[more]
gi\|1235666456\|ref\|WP_094816647.1\|	1.027e-83	72.02	ABC transporter ATP-binding protein [Bordetella ge...	[more]
gi\|1313466411\|dbj\|GBE42480.1\|	1.396e-83	73.21	daunorubicin/doxorubicin resistance ATP-binding pr...	[more]
gi\|1196406140\|ref\|WP_086088417.1\|	1.413e-83	72.62	ABC transporter ATP-binding protein [Pseudorhodopl...	[more]
gi\|1232291463\|gb\|OYV76695.1\|	1.748e-83	75.60	multidrug ABC transporter ATP-binding protein [Chr...	[more]
gi\|893712479\|ref\|WP_048940601.1\|	1.910e-83	72.02	ABC transporter ATP-binding protein [Bordetella hi...	[more]
gi\|625336533\|gb\|KCB50731.1\|	2.001e-83	72.62	ABC transporter, ATP-binding protein [Bordetella h...	[more]
gi\|890877610\|gb\|AKQ54758.1\|	2.377e-83	72.02	putative ABC transporter ATP-binding protein YbhF ...	[more]
gi\|1055722804\|ref\|WP_067335076.1\|	2.462e-83	75.00	ABC transporter ATP-binding protein [Stappia indic...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1_size3401120	supercontig	scaffold1_size3401120:674010..675554 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:ATP catabolic process

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold1_size3401120-snap-gene-6.39-mRNA-1	maker-scaffold1_size3401120-snap-gene-6.39-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1_size3401120:674010..675554+

gene from alignment at scaffold1_size3401120:674010..675554+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1_size3401120-snap-gene-6.39 ID=maker-scaffold1_size3401120-snap-gene-6.39|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1545bp|location=Sequence derived from alignment at scaffold1_size3401120:674010..675554+ (Tigriopus kingsejongensis)
ATGCCGTTGCATTTGATGAGCTTGGCAGGTGGGAATGGTGTCACGGCGTA
CTCCGATACTGGTCACTGTGGCTAGAGTACGAAGAATGACACAGGGAGGT
TGGGCTGTCGCTTTGTGCTTGAATTTGAGGCAAAGAACCTACTTTTCAGC
GCATTTTGTTGATCCCTGTCTGCCCGTTAGAGCATCTGTGGGCACGGCAA
ATAAGGCCACTTCGCCGGAATGGTTGTGAGACAATCCGCGAAACTATAGA
TAATCACACGGTTTATTATGAAGCTTTTGGTTCGCAATCTTTCTCGCACA
ACCTCTGAGGAAGACATTCGTACACTGTTTGCTGCCCATGGCACAGTCAC
AGAGTGTGATCTGGTTTTAGACAAGGAAACAGCGAAATCAAAAGGCTTTG
CATTTGTTGAGATGCCGAGTGAGACTCAGGCACAAGCGGCGATAACAGCG
CTGCATGAAACACGAGTAGAAAAGAGCCTGATTCGAGTGAAGGTCTCTAA
GTAAACTTTGTCAGTGGCGCCAGTGGTTGTTTGGGTCTGGCGCAATTTCC
AGAATTGGATATATTTGCAATAAATGTATCGTCGACTTTTTTTTGTTTTT
CGCACTTTCGATTTAATTCCCAGTCAGCATTTTCTATTGATATTCTGCGT
TCATTCGTATCGCTTTAGTGCTATCCAGCGTTTTTTCTCCAAAATCAGCA
TGGGTTTACTGCTGCACTTTTCCATCGAAAAATTGGACTGAAATCCTCTG
AGACTGTTTTTCTCATGGCGCGAGGGAAACAGAAAATGCCTTGCTGTGAA
TCAGGGTAGGGGTGGTATAGGCAATCCGCGCTTGGTGCTGTTCATCAGCG
GATACGTAAGCTGTAGTGGACTTGTCCGCAATGTCCCCCACAGCAAGCCT
CTTGGCTGATACCATTGGGCGGTTGTCCAGCAGAGGGTAGTCAGCGTGCA
GCCTATAGTTTCGATCTCAGATTTGTCCAAAACCTACAGTACAGGCCATA
CCGCATTGCAAGGTGTGACGCTGGATATCGCCAAGGGCGAGATTCTCGCG
CTACTGGGCCCCAATGGCGCGGGCAAGACCACGCTGATTTCCATTATTTG
CGGCATCGTCAATGCCAGCAGCGGCAGTGTGATCGTGGATGGCCATAGCA
TCACCGACGGCTACCGGCACACGCGCTCCGCCATCGGGCTGGTGCCGCAG
GAGTTGACGCTCGGCGCTTTCGATACAGTCTGGAATACGGTGTCGTTCAG
CCGCGGCTTGTTCGGCATGCCGAAAGACCCGGCCTATCTAGAGAAACTGC
TGAAGCAGCTCTCTTTGTGGGACAAAAAAGACAATATCCTGATGCATCTA
TCCGGTGGCATGAAGCGCCGGGTACTGATCGCCAAAGCCTTGTCGCATGA
GCCACGGGTGTTGTTTCTCGATGAGCCCACGGCGGGCGTAGACGTCGAAC
TTGCCAAATTCCCTTGCCACCTGAGCCCATCATCACCAGATAGGGAACTT
GGCTACAGGCAGCCTTCTACTACGCGGAGCACTTTGGCACGATAA

Synonyms

The feature 'abc transporter' has the following synonyms


Synonym
Tk04867

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