cuticle protein 19, maker-scaffold204_size260821-snap-gene-1.39 (gene) Tigriopus kingsejongensis

Overview
Namecuticle protein 19
Unique Namemaker-scaffold204_size260821-snap-gene-1.39
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of cuticle protein 19 vs. L. salmonis genes
Match: EMLSAG00000005115 (supercontig:LSalAtl2s:LSalAtl2s26:20671:21565:1 gene:EMLSAG00000005115 transcript:EMLSAT00000005115 description:"snap-LSalAtl2s26-processed-gene-0.7")

HSP 1 Score: 65.0846 bits (157), Expect = 1.431e-14
Identity = 43/115 (37.39%), Postives = 57/115 (49.57%), Query Frame = 0
Query:   34 VASYEPSKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPE-PAEGYGNSYKQKTQK 147
            +AS   ++P Y  +P  Y         P+ Y + Y V D   GT F A E+ +   T  G Y VQLPDGRLQ V YR D   GF+ADV+Y G  ++    P    G  Y+  + K
Sbjct:   10 LASLGSTRPQYGYNPVSYNT-------PRYYKYGYDVYDDXHGTKFGAYESSNGHDTT-GEYHVQLPDGRLQTVNYRDDGYSGFIADVSYSGYGKHSSHAPIHNLGYGYRGGSNK 116          
BLAST of cuticle protein 19 vs. L. salmonis genes
Match: EMLSAG00000000646 (supercontig:LSalAtl2s:LSalAtl2s10:897671:902286:1 gene:EMLSAG00000000646 transcript:EMLSAT00000000646 description:"maker-LSalAtl2s10-augustus-gene-9.22")

HSP 1 Score: 67.0106 bits (162), Expect = 3.213e-14
Identity = 43/95 (45.26%), Postives = 51/95 (53.68%), Query Frame = 0
Query:   47 SPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGE------AQYPPEPAE 135
            SP+  + ++E  I P  YNF Y VSD  TG   K  E   D   V GSY V  PDGR++ VTY AD E GF A V Y+G+      A  PP P E
Sbjct:   74 SPTVQKVQKERKIDPG-YNFGYSVSDTLTGDT-KTREETRDGDVVRGSYSVADPDGRIRTVTYTADAENGFQAKVTYDGKEGPVSIANQPPRPIE 166          
BLAST of cuticle protein 19 vs. L. salmonis genes
Match: EMLSAG00000005113 (supercontig:LSalAtl2s:LSalAtl2s26:142964:143594:1 gene:EMLSAG00000005113 transcript:EMLSAT00000005113 description:"augustus-LSalAtl2s26-processed-gene-1.2")

HSP 1 Score: 64.6994 bits (156), Expect = 3.251e-14
Identity = 42/93 (45.16%), Postives = 49/93 (52.69%), Query Frame = 0
Query:   40 SKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYR-ADHEGGFVADVAYEGEAQYPP 131
            S   Y P+PS        Y QP  Y + YGV D Y+G  F  +E++D   T  G Y VQLPDGRLQ V Y   D   G+VADV Y G   Y P
Sbjct:   15 SAQGYHPTPS--------YEQPAHYAYNYGVVDDYSGNNFGQSESRDGYVTS-GEYHVQLPDGRLQTVNYHVGDAYTGYVADVTYSGTPSYGP 98          
BLAST of cuticle protein 19 vs. L. salmonis genes
Match: EMLSAG00000012577 (supercontig:LSalAtl2s:LSalAtl2s937:136997:140196:1 gene:EMLSAG00000012577 transcript:EMLSAT00000012577 description:"augustus-LSalAtl2s937-processed-gene-0.11")

HSP 1 Score: 64.3142 bits (155), Expect = 9.116e-14
Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   66 FEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYR-ADHEGGFVADVAYEGEAQYPP 131
            ++Y VSD+Y G  F A+E +D   T  G Y V LPDGR+Q V+Y  AD   G+VADV Y GE QY P
Sbjct:   81 YQYAVSDEYAGLNFGADEARDGYSTN-GKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEPQYAP 146          
BLAST of cuticle protein 19 vs. L. salmonis genes
Match: EMLSAG00000005114 (supercontig:LSalAtl2s:LSalAtl2s26:148932:155474:-1 gene:EMLSAG00000005114 transcript:EMLSAT00000005114 description:"augustus-LSalAtl2s26-processed-gene-1.3")

HSP 1 Score: 64.6994 bits (156), Expect = 9.316e-14
Identity = 41/93 (44.09%), Postives = 49/93 (52.69%), Query Frame = 0
Query:   40 SKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRA-DHEGGFVADVAYEGEAQYPP 131
            S   + P+PS        Y QP  Y + YGV D Y+G  F  +E++D   T  G Y VQLPDGRLQ V Y   D   G+VADV Y G   Y P
Sbjct:   73 SAQGHHPTPS--------YEQPAHYAYNYGVVDDYSGNNFGQSESRDGYATS-GEYHVQLPDGRLQTVNYHVGDAYTGYVADVTYSGTPSYGP 156          
BLAST of cuticle protein 19 vs. nr
Match: gi|225714084|gb|ACO12888.1| (Cuticle protein 19 [Lepeophtheirus salmonis] >gi|290462447|gb|ADD24271.1| Cuticle protein 19 [Lepeophtheirus salmonis] >gi|290562317|gb|ADD38555.1| Cuticle protein 19 [Lepeophtheirus salmonis])

HSP 1 Score: 139.813 bits (351), Expect = 2.444e-39
Identity = 80/147 (54.42%), Postives = 97/147 (65.99%), Query Frame = 0
Query:    2 KCFVVLALVGMAVAYPMADNQDPYAPPPQYEQVASYEPSKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPEPAEGYGNSYK-QKTQK 147
            K  + + LVG+  A P AD   P   P +   +  YE +        S      ++ + PQPY+F+YGVSDQYTGT +KA E QDD GTVLGSY V LPDGR Q VTY AD  GGFVADV Y+GEAQ+PPEPAEGYGN+YK +KTQ+
Sbjct:    7 KYLIAICLVGLTFAAPRADR--PSHSPDKLGSI--YEET--------SLKGGDLDDDLPPQPYSFQYGVSDQYTGTNYKAVETQDDKGTVLGSYVVNLPDGRTQTVTYHADSYGGFVADVKYKGEAQFPPEPAEGYGNTYKLRKTQQ 141          
BLAST of cuticle protein 19 vs. nr
Match: gi|225712486|gb|ACO12089.1| (Cuticle protein 19 [Lepeophtheirus salmonis])

HSP 1 Score: 125.176 bits (313), Expect = 1.191e-33
Identity = 70/136 (51.47%), Postives = 84/136 (61.76%), Query Frame = 0
Query:    6 VLALVGMAVAYPMADNQDPYAPPP-QYEQVASYEPSKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPEPAEGYGNS 140
            +  L+ ++V    A    PYAPPP  Y+Q   Y+P+K    P            + PQP+ ++YGV D YTG AF  NE QD  G + GSY V LPDGR+Q VTY AD E GFVADV YEGEAQYPPEP EGYG+S
Sbjct:    1 MFKLIVLSVLIAAAFADQPYAPPPPVYKQAPVYQPAKGYKDPE-----------LPPQPFAYQYGVKDDYTGAAFNKNEEQDSYGNLQGSYSVNLPDGRVQTVTYHADAENGFVADVKYEGEAQYPPEPKEGYGHS 125          
BLAST of cuticle protein 19 vs. nr
Match: gi|290462717|gb|ADD24406.1| (Cuticle protein 7 [Lepeophtheirus salmonis] >gi|290562577|gb|ADD38684.1| Cuticle protein 7 [Lepeophtheirus salmonis])

HSP 1 Score: 108.227 bits (269), Expect = 2.246e-27
Identity = 67/146 (45.89%), Postives = 79/146 (54.11%), Query Frame = 0
Query:    2 KCFVVLALVGMAVAYPMADNQDPYAPPPQYEQVASYEPSKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPEPAEGYGNS---YKQK 144
            K  +V A++ +A+A        PYAP  +       EP  P                  PQP+ ++YGV D YTGT F  NE QD  G + GSY V LPDGR+Q V Y  D   GF+ADV YEGEAQYPPEP EGYGNS   YK K
Sbjct:    3 KLLIVFAVLSVAIA------DKPYAPTYK-------EPELP------------------PQPFAYQYGVKDDYTGTNFDKNEEQDAYGNLKGSYRVNLPDGRVQIVKYTVDAVEGFIADVQYEGEAQYPPEPKEGYGNSGPVYKSK 117          
BLAST of cuticle protein 19 vs. nr
Match: gi|225712982|gb|ACO12337.1| (Cuticle protein 7 [Lepeophtheirus salmonis])

HSP 1 Score: 106.686 bits (265), Expect = 1.184e-26
Identity = 66/146 (45.21%), Postives = 78/146 (53.42%), Query Frame = 0
Query:    2 KCFVVLALVGMAVAYPMADNQDPYAPPPQYEQVASYEPSKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPEPAEGYGNS---YKQK 144
            K  +V A++ +A+A        PYAP  +       EP  P                  PQP+ ++YGV D YTGT F  NE QD  G + GSY   LPDGR+Q V Y  D   GF+ADV YEGEAQYPPEP EGYGNS   YK K
Sbjct:    3 KLLIVFAVLSVAIA------DKPYAPTYK-------EPELP------------------PQPFAYQYGVKDDYTGTNFDKNEEQDAYGNLKGSYRANLPDGRVQIVKYTVDAVEGFIADVQYEGEAQYPPEPKEGYGNSGPVYKSK 117          
BLAST of cuticle protein 19 vs. nr
Match: gi|1325278345|ref|XP_023323818.1| (cuticle protein 7-like, partial [Eurytemora affinis])

HSP 1 Score: 107.457 bits (267), Expect = 1.918e-26
Identity = 60/105 (57.14%), Postives = 68/105 (64.76%), Query Frame = 0
Query:   55 EEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPEPAEGYGNSYKQKTQKGYAP-AKYAPAP 158
            E+E + PQP+ +EYGV D+YTG AF+  E Q+D G V GSY V LPDGR Q VTY ADH+GGFVADV YEG   YP  P  GYG        KG  P  KYAP P
Sbjct:   45 EDEKLPPQPFAYEYGVKDEYTGAAFQKTETQNDYGVVEGSYTVDLPDGRKQIVTYHADHDGGFVADVRYEGTPVYPDPPKGGYGLYTGPGAYKGPKPVVKYAPEP 149          
BLAST of cuticle protein 19 vs. nr
Match: gi|1325303300|ref|XP_023333227.1| (cuticle protein 19-like [Eurytemora affinis])

HSP 1 Score: 102.834 bits (255), Expect = 3.542e-25
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0
Query:   55 EEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPEPAEGYGNS 140
            +EE + PQP+ +EYGV+D Y+   FK  E QD  G V GS+ + LPDGR+Q  TY ADH  GF+ADV YEG   YPPEPA GYG++
Sbjct:   29 KEEKLAPQPFAYEYGVNDDYSKANFKKTETQDASGNVAGSFVIALPDGRIQTTTYTADHYNGFIADVTYEGTPVYPPEPAGGYGHA 114          
BLAST of cuticle protein 19 vs. nr
Match: gi|1067096419|ref|XP_018010163.1| (PREDICTED: larval cuticle protein A2B-like [Hyalella azteca])

HSP 1 Score: 94.3597 bits (233), Expect = 1.033e-21
Identity = 60/132 (45.45%), Postives = 69/132 (52.27%), Query Frame = 0
Query:    1 MKCFVVLALVGMAVAYPMADNQDPYAPPPQYEQVASYEPSKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPE 132
                 VL L  M  + P     DPY PP  Y+     EP+KP                     YNF YGVSD Y G  F  NE + D   V GSY VQLPDGR Q VTY+ADH+ GF ADV+Y+GEAQYPP+
Sbjct:    5 FTALAVLGLSAMVTSLP----SDPYQPPKHYK-----EPAKP---------------------YNFAYGVSDPYQGIDFGQNE-ESDGSLVQGSYSVQLPDGRQQIVTYQADHDRGFHADVSYKGEAQYPPK 105          
BLAST of cuticle protein 19 vs. nr
Match: gi|225714206|gb|ACO12949.1| (Cuticle protein 7 [Lepeophtheirus salmonis])

HSP 1 Score: 93.2041 bits (230), Expect = 2.645e-21
Identity = 60/117 (51.28%), Postives = 70/117 (59.83%), Query Frame = 0
Query:   42 PAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPEPAEGYGNSYKQKTQKGYAPAKYAPAP 158
            PAY+P+P      +E    P+PY F+YGVSD Y+GT F A EN D   TV GSY+V LPDGR+Q VTY AD   GFVADV YEG   YP          Y+ K+   Y PA Y PAP
Sbjct:   30 PAYKPAP-----YDES---PKPYAFQYGVSDDYSGTKFTAQENSD-AKTVAGSYQVALPDGRIQTVTYTADDYAGFVADVKYEGVPTYP---------KYEPKSS-AYRPAPYKPAP 127          
BLAST of cuticle protein 19 vs. nr
Match: gi|1325318713|ref|XP_023341117.1| (cuticle protein 7-like [Eurytemora affinis] >gi|1325318724|ref|XP_023341122.1| cuticle protein 7-like [Eurytemora affinis])

HSP 1 Score: 91.6633 bits (226), Expect = 9.679e-21
Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 0
Query:   39 PSKPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQYPPE 132
            P+ P Y  +P+ YQ   EE + PQP+ ++YGV+D Y+   F+  ENQD  G V GSY + LPDGR+Q   Y A HE GF+ADV+YEG  QYP E
Sbjct:   18 PANPGYG-APAPYQ---EEKLAPQPFAYQYGVNDDYSKANFQKEENQDAYGNVAGSYTIALPDGRIQTTRYTATHEDGFIADVSYEGVPQYPAE 107          
BLAST of cuticle protein 19 vs. nr
Match: gi|321475118|gb|EFX86081.1| (hypothetical protein DAPPUDRAFT_236611 [Daphnia pulex])

HSP 1 Score: 91.2781 bits (225), Expect = 3.117e-20
Identity = 62/132 (46.97%), Postives = 75/132 (56.82%), Query Frame = 0
Query:    1 MKCFVVLALVGMAV--AYPMADNQDPYAPPPQYEQVASYEPS--KPAYRPSPSRYQAKEEEYIQPQPYNFEYGVSDQYTGTAFKANENQDDVGTVLGSYEVQLPDGRLQRVTYRADHEGGFVADVAYEGEAQ 128
            MK  ++ ALV +    AYP      P  P P Y + A  EP+  KPAY PSP+   AK  EY  P PYNF++ V D  +   +   E  DD G V GSY V LPDGR Q V Y+AD   G+VADV YEGEA+
Sbjct:    1 MKVLILAALVAVVASQAYPKPQYPKPTYPEPSYPKPAYPEPAYPKPAY-PSPAY--AKTPEY-APMPYNFDWAVKDDPSYNDYAHQETADDKGYVTGSYRVLLPDGRTQVVNYKADDYTGYVADVKYEGEAK 128          
The following BLAST results are available for this feature:
BLAST of cuticle protein 19 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25
Match NameE-valueIdentityDescription
EMLSAG000000051151.431e-1437.39supercontig:LSalAtl2s:LSalAtl2s26:20671:21565:1 ge... [more]
EMLSAG000000006463.213e-1445.26supercontig:LSalAtl2s:LSalAtl2s10:897671:902286:1 ... [more]
EMLSAG000000051133.251e-1445.16supercontig:LSalAtl2s:LSalAtl2s26:142964:143594:1 ... [more]
EMLSAG000000125779.116e-1452.24supercontig:LSalAtl2s:LSalAtl2s937:136997:140196:1... [more]
EMLSAG000000051149.316e-1444.09supercontig:LSalAtl2s:LSalAtl2s26:148932:155474:-1... [more]

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BLAST of cuticle protein 19 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of cuticle protein 19 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225714084|gb|ACO12888.1|2.444e-3954.42Cuticle protein 19 [Lepeophtheirus salmonis] >gi|2... [more]
gi|225712486|gb|ACO12089.1|1.191e-3351.47Cuticle protein 19 [Lepeophtheirus salmonis][more]
gi|290462717|gb|ADD24406.1|2.246e-2745.89Cuticle protein 7 [Lepeophtheirus salmonis] >gi|29... [more]
gi|225712982|gb|ACO12337.1|1.184e-2645.21Cuticle protein 7 [Lepeophtheirus salmonis][more]
gi|1325278345|ref|XP_023323818.1|1.918e-2657.14cuticle protein 7-like, partial [Eurytemora affini... [more]
gi|1325303300|ref|XP_023333227.1|3.542e-2555.81cuticle protein 19-like [Eurytemora affinis][more]
gi|1067096419|ref|XP_018010163.1|1.033e-2145.45PREDICTED: larval cuticle protein A2B-like [Hyalel... [more]
gi|225714206|gb|ACO12949.1|2.645e-2151.28Cuticle protein 7 [Lepeophtheirus salmonis][more]
gi|1325318713|ref|XP_023341117.1|9.679e-2151.06cuticle protein 7-like [Eurytemora affinis] >gi|13... [more]
gi|321475118|gb|EFX86081.1|3.117e-2046.97hypothetical protein DAPPUDRAFT_236611 [Daphnia pu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold204_size260821supercontigscaffold204_size260821:251947..253054 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:structural constituent of cuticle
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold204_size260821-snap-gene-1.39-mRNA-1maker-scaffold204_size260821-snap-gene-1.39-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold204_size260821:251947..253054+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold204_size260821-snap-gene-1.39 ID=maker-scaffold204_size260821-snap-gene-1.39|Name=cuticle protein 19|organism=Tigriopus kingsejongensis|type=gene|length=1108bp|location=Sequence derived from alignment at scaffold204_size260821:251947..253054+ (Tigriopus kingsejongensis)
CTAGAAGTCGTTTGATCCTCCAACATTCCCAGAGTTAACATGAAGGTAAG TTCCCTCTCCACCTGGGCTTGTCCTCCCCATCTGGGAGTCAGAGTCAGTC AGCTCTGCTGTCCCTTGGATTCCTGTGTCCCTAATGGACTCTTGCTTGCC TCCGACAGTGCTTCGTTGTTTTGGCCCTCGTGGGTATGGCTGTGGCCTAC CCCATGGCTGATAACCAGGATCCCTATGCGCCCCCCCCTCAGTACGAGCA AGTCGCCTCGTATGAGCCCTCCAAGCCCGCCTACAGACCCTCTCCTTCCC GCTACCAGGCCAAGGAGGAGGAATACATCCAGCCCCAGCCTTATAATTTC GAGTATGGCGTGTCTGACCAGTACACCGGTACCGCCTTCAAGGCCAATGA GAACCAAGACGATGTCGGCACTGTTCTGGGTAAGAGCCCTCATATTGCTC GAGAGGCACATTGAGATACTGATTTTCATCCTTCCTCCCCAGGCTCCTAC GAGGTTCAACTTCCCGACGGTCGTCTCCAGCGTGTGACTTACCGTGCTGA CCACGAGGGTGGCTTCGTGGCCGATGTCGCCTATGAGGGTGAGGCCCAAT ACCCCCCTGAGCCCGCAGAGGGATACGGAAACAGCTACAAGCAGAAGACC CAGAAGGGCTACGCCCCCGCCAAATACGCCCCTGCTCCCCAACCCTACGA GAGCTAAACGATTTGATCCCGTCTCAAGTTAGATTGTTGTTCTAAATCGT GCTTGAATTGTCTCCCACTGTGATCTCCCATTCTTTACATCATTCTTGGA CATTTAAAGAGAGCAACCCCAATAGCCTGGCCCTGATCAGCCCACCCTCA AGATTGATTCAAGCAGAAATAATTTATCAGACTAACCCGAATGCCCATCC CAAAGGCCTTGTTACCAAGTACGTTGCCATTTCGACAATGTGTCGCGTGC GCCTAATGACAGAACTATTCTCCTGAGCCAAGTTGGGCGTCTCCTTCAAT TTTTGTGCCCTGCCACTCAAGGAGTGGATAGATATGTGCATTCAATGTGT TTGAGCGCTGAGCCTGGCGACCAGAGAATTAATAAAGATTGTTTTTAAAA CATGATTT
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Synonyms
The feature 'cuticle protein 19' has the following synonyms
Synonym
Tk07813
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