histone h2b-like, maker-scaffold2187_size19148-snap-gene-0.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of histone h2b-like vs. L. salmonis genes
Match: EMLSAG00000001022 (supercontig:LSalAtl2s:LSalAtl2s116:679040:679821:-1 gene:EMLSAG00000001022 transcript:EMLSAT00000001022 description:"snap-LSalAtl2s116-processed-gene-6.25") HSP 1 Score: 216.083 bits (549), Expect = 9.893e-74 Identity = 107/123 (86.99%), Postives = 115/123 (93.50%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAK-GDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122 MPPK++GKAAKKAGK QK+ K K+S KRKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVND+FERIA+E+SRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS Sbjct: 1 MPPKSTGKAAKKAGKVQKDAPKTAGXKRSHKRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDLFERIAAESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 123
BLAST of histone h2b-like vs. SwissProt
Match: gi|110279002|sp|P0C1H4.2|H2B5_CHICK (RecName: Full=Histone H2B 5; AltName: Full=H2B V) HSP 1 Score: 197.978 bits (502), Expect = 9.908e-66 Identity = 103/126 (81.75%), Postives = 107/126 (84.92%), Query Frame = 0 Query: 1 MP-PKTSGKAAKKAGK--AQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MP P S A KK K K KGDKK+ + RKESY+IY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPEPAKSAPAPKKGSKKAVTKTQKKGDKKRRKSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 126
BLAST of histone h2b-like vs. SwissProt
Match: gi|82117080|sp|Q9PSW9.3|H2B8_CHICK (RecName: Full=Histone H2B 8; AltName: Full=H2B VIII) HSP 1 Score: 197.978 bits (502), Expect = 1.082e-65 Identity = 103/126 (81.75%), Postives = 107/126 (84.92%), Query Frame = 0 Query: 1 MP-PKTSGKAAKKAGK--AQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MP P S A KK K K KGDKK+ + RKESY+IY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPEPAKSAPAPKKGSKKAVTKTQKKGDKKRRKTRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 126
BLAST of histone h2b-like vs. SwissProt
Match: gi|82230729|sp|Q5BJA5.3|H2B1_DANRE (RecName: Full=Histone H2B 1/2) HSP 1 Score: 197.593 bits (501), Expect = 1.521e-65 Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0 Query: 8 KAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 K +KKA K KG KK+ R RKESYAIY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 11 KGSKKA--VTKTAGKGGKKRKRTRKESYAIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 124
BLAST of histone h2b-like vs. SwissProt
Match: gi|59799554|sp|P69069.2|H2B_ONCMY (RecName: Full=Histone H2B >gi|59799555|sp|P69070.2|H2B_SALTR RecName: Full=Histone H2B) HSP 1 Score: 196.438 bits (498), Expect = 4.359e-65 Identity = 99/116 (85.34%), Postives = 103/116 (88.79%), Query Frame = 0 Query: 8 KAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 K +KKA K KG KK+ R RKESYAIY+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIA E+SRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 11 KGSKKA--VTKTAGKGGKKRKRSRKESYAIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 124
BLAST of histone h2b-like vs. SwissProt
Match: gi|7387743|sp|Q99880.3|H2B1L_HUMAN (RecName: Full=Histone H2B type 1-L; AltName: Full=Histone H2B.c; Short=H2B/c) HSP 1 Score: 195.282 bits (495), Expect = 1.289e-64 Identity = 101/122 (82.79%), Postives = 105/122 (86.07%), Query Frame = 0 Query: 2 PPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 P K S KA KA K K KK+ R RKESY++Y+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 11 PKKGSKKAVTKAQK------KDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 126
BLAST of histone h2b-like vs. SwissProt
Match: gi|81863477|sp|Q64475.3|H2B1B_MOUSE (RecName: Full=Histone H2B type 1-B; AltName: Full=h2B-143) HSP 1 Score: 194.897 bits (494), Expect = 1.641e-64 Identity = 101/117 (86.32%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 8 KAAKKA-GKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 K +KKA KAQK K KK+ R RKESY++Y+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 13 KGSKKAISKAQK---KDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 126
BLAST of histone h2b-like vs. SwissProt
Match: gi|122016|sp|P10853.2|H2B1F_MOUSE (RecName: Full=Histone H2B type 1-F/J/L; AltName: Full=H2B 291A) HSP 1 Score: 194.897 bits (494), Expect = 1.831e-64 Identity = 101/122 (82.79%), Postives = 105/122 (86.07%), Query Frame = 0 Query: 2 PPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 P K S KA KA K K KK+ R RKESY++Y+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 11 PKKGSKKAVTKAQK------KDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 126
BLAST of histone h2b-like vs. SwissProt
Match: gi|81866317|sp|Q8CGP2.3|H2B1P_MOUSE (RecName: Full=Histone H2B type 1-P) HSP 1 Score: 194.897 bits (494), Expect = 1.913e-64 Identity = 101/122 (82.79%), Postives = 105/122 (86.07%), Query Frame = 0 Query: 2 PPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 P K S KA KA K K KK+ R RKESY++Y+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 11 PKKGSKKAVTKAQK------KDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 126
BLAST of histone h2b-like vs. SwissProt
Match: gi|122023|sp|P02281.2|H2B11_XENLA (RecName: Full=Histone H2B 1.1; Short=H2B1.1) HSP 1 Score: 193.741 bits (491), Expect = 4.754e-64 Identity = 104/126 (82.54%), Postives = 107/126 (84.92%), Query Frame = 0 Query: 1 MP-PKTSGKAAKKAGK-AQKNIAKGDKKKSRK-RKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MP P S A KK K A K D KK RK RKESYAIY+YKVLKQVHPDTGISSKAMSIMNSFVND+FERIA EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS+K Sbjct: 1 MPEPAKSAPAPKKGSKKAVTKTQKKDGKKRRKSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
BLAST of histone h2b-like vs. SwissProt
Match: gi|81866316|sp|Q8CGP1.3|H2B1K_MOUSE (RecName: Full=Histone H2B type 1-K) HSP 1 Score: 193.741 bits (491), Expect = 5.133e-64 Identity = 100/122 (81.97%), Postives = 105/122 (86.07%), Query Frame = 0 Query: 2 PPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 P K S KA KA K K KK+ R RKESY++Y+YKVLKQVHPDTGISSKAM IMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS+K Sbjct: 11 PKKGSKKAVTKAQK------KDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126
BLAST of histone h2b-like vs. nr
Match: gi|1233187076|ref|XP_022195035.1| (histone H2B [Nilaparvata lugens] >gi|1233187080|ref|XP_022195036.1| histone H2B [Nilaparvata lugens] >gi|1233187084|ref|XP_022195037.1| histone H2B [Nilaparvata lugens] >gi|1233187087|ref|XP_022195038.1| histone H2B [Nilaparvata lugens] >gi|1233187091|ref|XP_022195040.1| histone H2B [Nilaparvata lugens] >gi|1233187108|ref|XP_022195045.1| histone H2B [Nilaparvata lugens] >gi|1233202176|ref|XP_022207293.1| histone H2B [Nilaparvata lugens] >gi|1233205395|ref|XP_022201822.1| histone H2B [Nilaparvata lugens] >gi|1233211553|ref|XP_022205130.1| histone H2B [Nilaparvata lugens] >gi|1233212693|ref|XP_022205743.1| histone H2B [Nilaparvata lugens] >gi|1233212695|ref|XP_022205744.1| histone H2B [Nilaparvata lugens] >gi|1233213016|ref|XP_022205919.1| histone H2B [Nilaparvata lugens] >gi|1233213455|ref|XP_022206158.1| histone H2B [Nilaparvata lugens] >gi|1233214145|ref|XP_022206528.1| histone H2B [Nilaparvata lugens] >gi|1035439603|gb|ANJ04652.1| histone H2B [Nilaparvata lugens]) HSP 1 Score: 243.817 bits (621), Expect = 2.182e-81 Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPKTSGKAAKKAGKAQKNIAKGDKKK RKRKESYA+YIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKKRKRKESYAVYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
BLAST of histone h2b-like vs. nr
Match: gi|573966005|ref|XP_006665103.1| (PREDICTED: histone H2B [Oryza brachyantha] >gi|1009557113|ref|XP_015913733.1| histone H2B [Parasteatoda tepidariorum] >gi|1117312224|ref|XP_019435463.1| PREDICTED: histone H2B [Lupinus angustifolius] >gi|14269422|gb|AAK58064.1|AF378198_4 histone H2B [Rhynchosciara americana] >gi|674228935|gb|KFK22720.1| hypothetical protein AALP_AAs74787U000100 [Arabis alpina] >gi|1227110482|gb|ASQ41242.1| histone H2B [Anacridium incisum] >gi|1227110484|gb|ASQ41243.1| histone H2B [Schistocerca pallens] >gi|1227110486|gb|ASQ41244.1| histone H2B [Schistocerca literosa] >gi|1227110488|gb|ASQ41245.1| histone H2B [Schistocerca melanocera] >gi|1227110490|gb|ASQ41246.1| histone H2B [Halmenus robustus] >gi|1227110492|gb|ASQ41247.1| histone H2B [Schistocerca obscura] >gi|1227110494|gb|ASQ41248.1| histone H2B [Schistocerca shoshone] >gi|1227110496|gb|ASQ41249.1| histone H2B [Schistocerca nitens] >gi|1227110498|gb|ASQ41250.1| histone H2B [Schistocerca centralis] >gi|1227110500|gb|ASQ41251.1| histone H2B [Schistocerca lineata] >gi|1227110502|gb|ASQ41252.1| histone H2B [Schistocerca serialis cubense] >gi|1227110504|gb|ASQ41253.1| histone H2B [Schistocerca pallens] >gi|1227110506|gb|ASQ41254.1| histone H2B [Schistocerca gregaria] >gi|1227110508|gb|ASQ41255.1| histone H2B [Schistocerca nitens] >gi|1227110510|gb|ASQ41256.1| histone H2B [Schistocerca nitens] >gi|1227110512|gb|ASQ41257.1| histone H2B [Austracris guttulosa] >gi|1227110514|gb|ASQ41258.1| histone H2B [Cyrtacanthacris aeruginosa] >gi|1227110516|gb|ASQ41259.1| histone H2B [Nomadacris septemfasciata] >gi|1227110518|gb|ASQ41260.1| histone H2B [Schistocerca albolineata] >gi|1227110520|gb|ASQ41261.1| histone H2B [Schistocerca alutacea] >gi|1227110522|gb|ASQ41262.1| histone H2B [Schistocerca rubiginosa] >gi|1227110524|gb|ASQ41263.1| histone H2B [Schistocerca ceratiola] >gi|1227110526|gb|ASQ41264.1| histone H2B [Schistocerca lineata] >gi|1227110528|gb|ASQ41265.1| histone H2B [Schistocerca lineata] >gi|1227110530|gb|ASQ41266.1| histone H2B [Schistocerca quisqueya] >gi|1227110532|gb|ASQ41267.1| histone H2B [Schistocerca flavofasciata] >gi|1227110534|gb|ASQ41268.1| histone H2B [Schistocerca pallens] >gi|1227110536|gb|ASQ41269.1| histone H2B [Schistocerca piceifrons] >gi|1227110538|gb|ASQ41270.1| histone H2B [Schistocerca nitens caribbeana] >gi|1227110540|gb|ASQ41271.1| histone H2B [Schistocerca cohni] >gi|1227110542|gb|ASQ41272.1| histone H2B [Schistocerca americana] >gi|1227110544|gb|ASQ41273.1| histone H2B [Schistocerca damnifica] >gi|1227110546|gb|ASQ41274.1| histone H2B [Schistocerca socorro] >gi|1227110548|gb|ASQ41275.1| histone H2B [Valanga sp. HS-2017] >gi|1227110550|gb|ASQ41276.1| histone H2B [Schistocerca cancellata] >gi|1227110552|gb|ASQ41277.1| histone H2B [Schistocerca nitens] >gi|1227110554|gb|ASQ41278.1| histone H2B, partial [Acanthacris ruficornis]) HSP 1 Score: 243.047 bits (619), Expect = 4.262e-81 Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPKTSGKAAKKAGKAQKNI+KGDKKK RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPPKTSGKAAKKAGKAQKNISKGDKKKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
BLAST of histone h2b-like vs. nr
Match: gi|462238|sp|P35069.2|H2B3_TIGCA (RecName: Full=Histone H2B.3 >gi|161902|gb|AAC41557.1| histone H2B-3 [Tigriopus californicus]) HSP 1 Score: 243.047 bits (619), Expect = 5.546e-81 Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPK SGKAAKKAGKAQKNI+KGDKKK+RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPPKVSGKAAKKAGKAQKNISKGDKKKNRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
BLAST of histone h2b-like vs. nr
Match: gi|462237|sp|P35068.2|H2B1_TIGCA (RecName: Full=Histone H2B.1/H2B.2 >gi|161897|gb|AAC41554.1| histone H2B-1 [Tigriopus californicus] >gi|161900|gb|AAC41556.1| histone H2B-2 [Tigriopus californicus] >gi|260527|gb|AAA12277.1| histone H2B-1 [Tigriopus californicus]) HSP 1 Score: 242.276 bits (617), Expect = 8.325e-81 Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPK SGKAAKKAGKAQKNI KGDKKK+RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPPKVSGKAAKKAGKAQKNITKGDKKKNRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
BLAST of histone h2b-like vs. nr
Match: gi|1233201887|ref|XP_022207171.1| (histone H2B-like [Nilaparvata lugens]) HSP 1 Score: 242.276 bits (617), Expect = 1.083e-80 Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPKTSGKAAKKAGKAQKNIAKGDKKK RKRKESYA+YIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKH VSEGTKAVTKYTSSK Sbjct: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKKRKRKESYAVYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHTVSEGTKAVTKYTSSK 123
BLAST of histone h2b-like vs. nr
Match: gi|1233171534|ref|XP_022187484.1| (histone H2B-like [Nilaparvata lugens]) HSP 1 Score: 241.891 bits (616), Expect = 1.170e-80 Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPKTSGKAAKKAGKAQKNIAKGDKKK RKRKESYA+YIYKVLKQVHPDTGISS AMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKKRKRKESYAVYIYKVLKQVHPDTGISSNAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
BLAST of histone h2b-like vs. nr
Match: gi|817085037|ref|XP_012265189.1| (histone H2B.3 [Athalia rosae] >gi|817085039|ref|XP_012265190.1| histone H2B.3 [Athalia rosae] >gi|998508807|ref|XP_015514798.1| PREDICTED: histone H2B.3 [Neodiprion lecontei]) HSP 1 Score: 241.121 bits (614), Expect = 2.441e-80 Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPK SGKAAKKAGKAQKNI+KGDKKK RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPPKASGKAAKKAGKAQKNISKGDKKKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
BLAST of histone h2b-like vs. nr
Match: gi|194776926|ref|XP_001967857.1| (uncharacterized protein Dana_GF20679 [Drosophila ananassae] >gi|195388846|ref|XP_002053089.1| uncharacterized protein Dvir_GJ23530 [Drosophila virilis] >gi|190631494|gb|EDV44911.1| uncharacterized protein Dana_GF20679 [Drosophila ananassae] >gi|194151175|gb|EDW66609.1| uncharacterized protein Dvir_GJ23530 [Drosophila virilis]) HSP 1 Score: 236.113 bits (601), Expect = 2.857e-78 Identity = 119/123 (96.75%), Postives = 120/123 (97.56%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPKTSGKAAKKAGKAQKNI K DKKK RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPPKTSGKAAKKAGKAQKNITKNDKKK-RKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 122
BLAST of histone h2b-like vs. nr
Match: gi|1218210757|ref|XP_021712202.1| (LOW QUALITY PROTEIN: histone H2B-like [Aedes aegypti]) HSP 1 Score: 233.802 bits (595), Expect = 1.866e-77 Identity = 114/123 (92.68%), Postives = 120/123 (97.56%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 M PKTSGKAAKK+GKAQKNI KGDK+K ++RKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MAPKTSGKAAKKSGKAQKNIVKGDKEKKQRRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
BLAST of histone h2b-like vs. nr
Match: gi|970886089|ref|XP_015127773.1| (PREDICTED: histone H2B.3 [Diachasma alloeum]) HSP 1 Score: 226.483 bits (576), Expect = 1.939e-74 Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 0 Query: 1 MPPKTSGKAAKKAGKAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 MPPK SGKA KKAGKAQKNIAKGDKKK RKRKESYAIYIYKVLKQVHPDTG+SSKAMSIMNSFVNDIFERIA+EASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK Sbjct: 1 MPPKVSGKAVKKAGKAQKNIAKGDKKKKRKRKESYAIYIYKVLKQVHPDTGVSSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123 The following BLAST results are available for this feature:
BLAST of histone h2b-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of histone h2b-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of histone h2b-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2187_size19148:7124..11788+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold2187_size19148-snap-gene-0.9 ID=maker-scaffold2187_size19148-snap-gene-0.9|Name=histone h2b-like|organism=Tigriopus kingsejongensis|type=gene|length=4665bp|location=Sequence derived from alignment at scaffold2187_size19148:7124..11788+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'histone h2b-like' has the following synonyms
Add to Basket
|