nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor, maker-scaffold220_size252247-snap-gene-1.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000007737 (supercontig:LSalAtl2s:LSalAtl2s44:961763:992679:1 gene:EMLSAG00000007737 transcript:EMLSAT00000007737 description:"maker-LSalAtl2s44-augustus-gene-10.10") HSP 1 Score: 503.056 bits (1294), Expect = 1.031e-176 Identity = 278/398 (69.85%), Postives = 294/398 (73.87%), Query Frame = 0 Query: 130 LDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLG-----------------------------------------TYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADD-----GMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 LDL NDEG STYV NGEW LLGVPG+RNEVFYDCCPEPYLDVTF IKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF VS+ MPVTS PLLG TYFNCIMFMVASSVVTTIMILNYHHRLADTH MPNWVRCVFLQWIPW+LRMGRPGEKITRKTI+MQNKMKELDLKERSSKSLLANVLDMDDDFRP+STLPH H H S G + + GF RVT GL PP G G+ T+G G + + PPG+HRELSLILKE+RVITDKIR+DEDTAAIENDWKFAAMVLDRLCLI FT FTI AT+AVL SAPHIIV Sbjct: 71 LDLQTQNDEGV--TSTYVLNGEWALLGVPGKRNEVFYDCCPEPYLDVTFVIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQQNVSEAMPVTSLQVPLLGFTILLSLTVFSQVVSESMPATSDALPLLVTFFLFHAYISKGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPNWVRCVFLQWIPWVLRMGRPGEKITRKTILMQNKMKELDLKERSSKSLLANVLDMDDDFRPASTLPHIHPHHPSHSLAGGSGTGSTANSSTKSGF-RVTPGLHQPPPPPPPPPLGNSTGDVTLGDGMT-SGIPPGIHRELSLILKEIRVITDKIREDEDTAAIENDWKFAAMVLDRLCLITFTMFTIIATVAVLFSAPHIIV 464 HSP 2 Score: 57.3806 bits (137), Expect = 4.723e-9 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 0 Query: 4 YNNLERPVYNESESLKLAFGLTLQQIIDV 32 YNNLERPV+NESE LKL+FGLTLQQIIDV Sbjct: 42 YNNLERPVFNESEPLKLSFGLTLQQIIDV 70
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000007472 (supercontig:LSalAtl2s:LSalAtl2s429:150037:177030:-1 gene:EMLSAG00000007472 transcript:EMLSAT00000007472 description:"maker-LSalAtl2s429-augustus-gene-2.12") HSP 1 Score: 395.971 bits (1016), Expect = 3.182e-135 Identity = 215/381 (56.43%), Postives = 264/381 (69.29%), Query Frame = 0 Query: 128 FKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVT-----SGLPPPPADDGMVGGNG---------------------TVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIVQ 481 F+LDL + ++ GD+S+++ NGEW L+GVPG R+E+FY+CCPEPY+D+TFTI IRRRTLYYFFNLIVPCVLI+SMA+LGFTLPPDSGEKL+L VT+LLSLTVF+N VS MP TSD PL+GTYFNCIM MVASSVV T+++LNYHHR A+TH MP WVR FLQW+PW+LRM RPG+ ITRK+I+M N++KEL+LKE++SKSLLANVLDMDDDFRP S + + G S TP GFMRV S P D T G G G +REL ILKEL+ IT++++ ++ I +DWKFAAMV+DR CLI FT FT+ T+AVLLSAPHIIV+ Sbjct: 66 FQLDLTLKDEGKGGDISSFIPNGEWDLIGVPGTRHELFYECCPEPYVDITFTIHIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLDVTVLLSLTVFMNIVSQIMPTTSDAVPLIGTYFNCIMMMVASSVVLTVVVLNYHHRTAETHDMPPWVRTAFLQWLPWILRMNRPGKPITRKSILMTNRIKELELKEKTSKSLLANVLDMDDDFRPMSV-----------AGGYGTGA-NSGSTPGASGFMRVNGNPMDSSGGAPVTDKAPPPPTSSPYPIHGAPSAPPPPPPPGSCTFGTG--------GSNRELQCILKELKFITNRMKIMDEEEEIMSDWKFAAMVIDRFCLITFTAFTVITTVAVLLSAPHIIVE 426
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000001002 (supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1 gene:EMLSAG00000001002 transcript:EMLSAT00000001002 description:"maker-LSalAtl2s116-snap-gene-4.16") HSP 1 Score: 285.419 bits (729), Expect = 2.385e-90 Identity = 178/522 (34.10%), Postives = 271/522 (51.92%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQG--------DVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSL--GVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKT-------------IMMQNKMKELDLKERSSKSLLANVLDMDD---DFRPSSTLPHSHMHPHHPSHT--HSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHI 478 L YN L RPV N S+++ + L L Q+IDV W D M W EYG ++ + +P +W+PD+++YN+AD F+ T T + + G + PP I+ S+C++D+ +FPFD+Q C MKFGSWTY+GF++DL + +E QG D+S + + EW +L VP RN Y CC EPYLD+TF I +RR+TL+Y NLI+PC+ I+ + VL F LP DSGEK ++ ++ILLSLTVF +++ +P TS PLLG + M + S+ T+++LN H R TH M WVR VF+ +P +L M RPG+ K M++ + +++R S + + +D + +SH H ++ + +S L TP + + P G NG P V+R L + R I + + +ED+ ++ DWK+ AMV+DRL L IFT + + ++L AP + Sbjct: 31 LSNYNKLVRPVVNVSDAVTVKLKLKLSQLIDVNLRNQIMTTNLWVEQFWYDYKMRWEPDEYGGVDMLHVPSDHIWRPDIVLYNNADGNFEVTLSTKATLFNTGLVVWRPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGFQVDL-RHQEEEQGTNVVNIGVDLSEFYMSVEWDILAVPAIRNVKVYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKXNVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHTMAPWVRRVFIHILPRLLVMRRPGQSPESKMRSRPMIKENGYGHYMIEQVRLQHVIQQRESNHINVHYEASEDPETAYESKQNYKNSHFHDNNNTEIFDYSSCELHGTPENLPSPPPPLNPSFIYP-------GPNGEC----------PEVYRALDGV----RYIAECTKREEDSCKVKEDWKYVAMVMDRLFLWIFTIAVLVGSAGIILQAPAL 530
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0") HSP 1 Score: 258.84 bits (660), Expect = 1.080e-82 Identity = 124/284 (43.66%), Postives = 179/284 (63.03%), Query Frame = 0 Query: 31 DVEWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQG-------DVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEK 306 D EWKD W+ SEYG + +I +P + +W PD+++YN+AD + T T +++ +G + PP IFKS+C+ID+ +FPFD Q C +KFGSW+++GF++DLV N + D+S Y N EW +L VP +R+ Y CCPEPY D+ F+I IRR+ L+Y NLI+PCV I +++L F LP SGEK +L + IL+S T++ V + +P TS PLLG Y M +A +V T +ILN H+R TH MP WVR F+Q +P +L M P ++ Sbjct: 8 DHEWKDYKFTWDPSEYGGVTEIYVPSEHIWLPDIILYNNADGDYIVTTMTKAILHYDGKVVWTPPAIFKSSCEIDVEFFPFDKQTCFLKFGSWSFDGFQVDLVHINSQPDNDTVSYGMDLSEYYLNVEWDILEVPAERHVKTYPCCPEPYPDIYFSIIIRRKPLFYVVNLIIPCVGIFYLSILVFYLPAQSGEKTALVIAILVSQTLYFTLVIEVIPATSKTLPLLGRYLIFSMIFIAIAVTLTTIILNLHYRKPSTHRMPQWVRRTFIQRLPRILLMRVPIQE 291
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000009264 (supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 gene:EMLSAG00000009264 transcript:EMLSAT00000009264 description:"maker-LSalAtl2s58-snap-gene-5.5") HSP 1 Score: 254.218 bits (648), Expect = 7.219e-79 Identity = 138/350 (39.43%), Postives = 208/350 (59.43%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQG-------DVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERS 327 L Y+ L RPV N S+ L + GL L QII + EW D + W +YG ++ + +P Q +W PD+++YN+AD ++ T T V++ +G + PP I+KS+C+ID+ +FPFD+Q C MKFGSWTY+G+ +DL N +G D+ Y + EW ++ P RNE +Y CC EPY D+ F + +RR++L+Y N+I+PCV I+ ++VL F LP DSGEK+SL ++ILLSLTVF +++ +P TS PLLG Y M +V SV+ TI +LN + R TH M WVR F++++P L + RP ++ + ++ E D K ++ Sbjct: 36 LSNYDRLIRPVGNSSDRLTVKMGLKLSQIIGIDMKRQIMITNVWVAQEWHDYKLKWKPEDYGGVKHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHFSGRVVWNPPAIYKSSCEIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKGSSSEIEIGMDLQEYYISTEWDVMTAPAVRNEKYYPCCEEPYPDIIFYLTLRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPSTSIAVPLLGKYLLFTMILVTFSVMLTIGVLNVNFRTPATHKMAPWVRKTFVEFLPRFLFIRRPEKEEEEEEEVLFTPETECDEKSQA 385
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18") HSP 1 Score: 243.817 bits (621), Expect = 4.805e-77 Identity = 125/319 (39.18%), Postives = 182/319 (57.05%), Query Frame = 0 Query: 4 YNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQK--------------LWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEP-YLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQ 292 YN LERPV + E ++L+ G++L++II ++ WKD N+ WN+SEY IE +++P + +W PD+L+YNSA AF+ Y N+++++ G Y+PPGI +STC+ EW +LG+P R E YDCC + + D+T+TI++RRRTLYY N +PCVLIASMA+LGF PP+SGEK++L +TIL+SLT F+N V+D P +S PL+G YF+CIM M+ASSV+ +I+++NYHHRL + MP W R +F + Sbjct: 34 YNILERPVRDPKEPVQLSMGVSLRRIIGLDEKNQILTANLWITLIWKDHNLHWNRSEYPKIERLQIPTEHSIPKLERLQIPTEHVWTPDILLYNSASTAFNNFYHVNLLLSNEGEIRYMPPGIIQSTCE-----------------------------------------------EWEVLGMPAIRTEDIYDCCKDKIFQDITYTIQLRRRTLYYLGNWTLPCVLIASMAILGFYFPPESGEKITLEITILMSLTFFMNMVTDMQPPSSKTPLVGIYFSCIMIMIASSVICSILVINYHHRLTEYGDMPKWFRFIFFK 305
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000007263 (supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1 gene:EMLSAG00000007263 transcript:EMLSAT00000007263 description:"maker-LSalAtl2s408-augustus-gene-5.30") HSP 1 Score: 252.292 bits (643), Expect = 4.933e-77 Identity = 143/381 (37.53%), Postives = 225/381 (59.06%), Query Frame = 0 Query: 4 YNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLG 368 YN L RPV N ++ +++AFGL Q+I+V W D + W++++YG I +R+PP K+WKPD++++N+AD ++ Y++NV++ +G ++PP I++S+C ID+T+FPFD Q C MKFGSWT+ G ++ L + N++ D+S Y ++G W ++ VP N + D P D++F I IRR+TL+Y NLI+P VLI+ + VL F LP ++GEK++LG++ILLSL VFL VS +P TS PL+ Y M S++ T++I+N++ R TH MPNW+R +FL+++P +L M RP K TR MM+ + + + ++ ++ H HHP S PL Sbjct: 38 YNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRFVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFTGDQVSLTLYNNKDYVDLSDYWKSGTWDIIEVPAYLN-IHNDTLPTE-TDISFYITIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVVIINWNFRGPRTHSMPNWIRVLFLKYLPIVLFMRRP--KKTRLRWMMEMPGQSRRIPPPHPSYCPPPTNNGTSSSSNNNNNTSNNNHQHHPHPDSSSSPLS 414 HSP 2 Score: 53.9138 bits (128), Expect = 6.446e-8 Identity = 29/93 (31.18%), Postives = 44/93 (47.31%), Query Frame = 0 Query: 386 PPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHI 478 PPPP G G + S P +R + + I + +R++++ I DWKF AMV+D L +F T T+ +L+ APHI Sbjct: 537 PPPPHHRG--GRRNSDEDDGSEAFLSPEAYRAT----QAVEFIAEHLRNEDEYLQIREDWKFVAMVVDXXQLYVFFXVTTVGTVGILMDAPHI 623
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12") HSP 1 Score: 178.333 bits (451), Expect = 5.739e-52 Identity = 102/277 (36.82%), Postives = 149/277 (53.79%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLV-MNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVA 260 L YN L RPV N ++ L + L L Q+IDV W D + W+ EYG + + +P +W+PD+++YN+AD F+ T T + NG + PP I+KS+C+ID+ +FPFD+Q C MKFGSWTY+GF++DL M +G V ++ E+++ R+TL+Y NLI+PC+ I+ + VL F LP DSGEK++L ++IL SL VF V + +P TS PLLG Y M +V+ Sbjct: 61 LSNYNKLVRPVINTTDPLLVRIKLKLSQLIDVNLKNQIMTTNLWVEQYWFDYKLKWDPEEYGGVRQLHVPSDHIWRPDIVLYNNADGNFEVTLATKAXLWFNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHMCEVDGTNVVPLGIDLSEFYI-----------------------------RKTLFYTVNLIIPCMGISFLTVLTFYLPSDSGEKVTLSISILTSLYVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 308
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000002955 (supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 gene:EMLSAG00000002955 transcript:EMLSAT00000002955 description:"maker-LSalAtl2s16-augustus-gene-3.5") HSP 1 Score: 171.014 bits (432), Expect = 4.800e-50 Identity = 92/240 (38.33%), Postives = 137/240 (57.08%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDL-----VMNNDEGQ--GDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKL 218 L YN L PV N SE++ + L L Q+IDV W D + W+ +E ++ + + P+ SAD F+ T T + ++G + PP I+ S+C++D+ +FPFD+Q C MKFGSWTY+G+++DL VM E + D++ + + EW +L VP RN +Y CC EPYLD+TF + +RR+TL+Y NLI+PC+ I+ + VL F LP DSGEK+ Sbjct: 37 LSNYNKLVXPVVNVSEAVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPTE-NHVYNFYLFPR-----------SADGNFEVTLATKATLMASGKVEWKPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGYQVDLRHIDEVMGKPEVEIGVDLTEFYMSVEWDILEVPAIRNVKYYXCCXEPYLDITFNVTMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKV 264
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000006919 (supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-1 gene:EMLSAG00000006919 transcript:EMLSAT00000006919 description:"snap_masked-LSalAtl2s391-processed-gene-5.26") HSP 1 Score: 173.711 bits (439), Expect = 7.372e-50 Identity = 114/350 (32.57%), Postives = 161/350 (46.00%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLAN 334 L YN L RPV N +E L + GL L Q+IDV+ W D + W EYG +E + +P Q +W PD++++N+AD ++ T T + G + PP I+KS+CKI++ WFPFD+Q C+MKFGSWTY+GF++DL + E +V + I + YY L C+ I LLSLTVF +++ +P TS PLLG Y M +V S+ T+ +LN H R TH M W+R +F+ +P ML M RP I R + E LK RS+ L+ N Sbjct: 35 LSNYNRLIRPVSNNTEKLTVRLGLKLSQLIDVDLKNQVMTTNVWVEQKWLDYKLNWKPEEYGGVEMLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGEVVWKPPAIYKSSCKINVEWFPFDEQSCDMKFGSWTYDGFQVDLKHVDQEKGSNV----------------------------------VKVGIDLKEFYYSVTL---CISI------------------------LLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSICVTVGVLNIHFRSPATHRMSPWMRKIFIHIMPRMLLMTRP-HYIPRYS-------AEPPLKSRSNDDLMYN 315
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|2492620|sp|Q15825.1|ACHA6_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 281.567 bits (719), Expect = 2.879e-88 Identity = 162/492 (32.93%), Postives = 257/492 (52.24%), Query Frame = 0 Query: 4 YNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPS---HTHSVGPLGSTPTPVGGGFMR--VTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLS 474 YN RPV N S+ + + F + + Q+ +V+ W D + W+ EY IE +R+P K+WKPD+++YN+A F +T ++ NG T+ PP IFKS+C +DIT+FPFD Q+C +KFGSWTY+ ++DL++ + D++ + EN EW ++ G ++++ Y+CC E Y D+T++ IRR ++Y NLI+PC+ I+ + VL F LP D GEK++L +++LLSLTVFL +++T+P TS PL+G Y M V S+V T+ +LN H+R TH MP WV+ VFL+ +P +L M P +K TR T + L R +K LA SH P H H H L ++ + ++ V + P +D ++ ++ I + ++ +T +E+DWK+ AMV+DR+ L +F + T + L Sbjct: 45 YNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIG--SKVDMNDFWENSEWEIIDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVVPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKLLPQVLLMRWPLDK-TRGT---GSDAVPRGLARRPAKGKLA-----------------SHGEPRHLKECFHCHKSNELATSKRRLSHQPLQWVVENSEHSPEVED----------------------------VINSVQFIAENMKSHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|61211734|sp|Q5IS76.1|ACHA6_PANTR (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 281.567 bits (719), Expect = 3.239e-88 Identity = 162/492 (32.93%), Postives = 257/492 (52.24%), Query Frame = 0 Query: 4 YNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPS---HTHSVGPLGSTPTPVGGGFMR--VTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLS 474 YN RPV N S+ + + F + + Q+ +V+ W D + W+ EY IE +R+P K+WKPD+++YN+A F +T ++ NG T+ PP IFKS+C +DIT+FPFD Q+C +KFGSWTY+ ++DL++ + D++ + EN EW ++ G ++++ Y+CC E Y D+T++ IRR ++Y NLI+PC+ I+ + VL F LP D GEK++L +++LLSLTVFL +++T+P TS PL+G Y M V S+V T+ +LN H+R TH MP WV+ VFL+ +P +L M P +K TR T + L R +K LA SH P H H H L ++ + ++ V + P +D ++ ++ I + ++ +T +E+DWK+ AMV+DR+ L +F + T + L Sbjct: 45 YNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRIPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIG--SKVDMNDFWENSEWEIIDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVVPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKLLPQVLLMRWPLDK-TRGT---GSDAVPRGLARRPAKGKLA-----------------SHGEPRHLKECFHCHKSNELATSKRRLSHHPLQWVVENSEHSPEVED----------------------------VINSVQFIAENMKSHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|57012605|sp|Q8R493.1|ACHB4_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit beta-4; Flags: Precursor) HSP 1 Score: 280.796 bits (717), Expect = 7.040e-88 Identity = 169/491 (34.42%), Postives = 259/491 (52.75%), Query Frame = 0 Query: 3 KYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHS---HMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRE-LSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLL 473 +YNNL RP + S+ + + L+L Q+I V EW D + WN S Y + +R+P +++W PD+++YN+AD ++ + TNV+V SNGS ++PP I+KS CKI++ FPFD Q+C +KF SWTY+ ++D+V+ + D + +GEW ++ +PG+R D Y+DVT+ I+R+ L+Y NLI+PCVLI S+A+L F LP D GEK++L +++LL+LT FL +S +P TS D PL+G Y M +V S+VTT+ +LN HHR TH M +WV+ FL +P L M RPG +++ + +PHS H+ + T ++GP S+P+ + G M + P PA + T G G R+ L L+ + I + D+ ++ DWKF AMV+DRL L +F I T+ + L Sbjct: 38 RYNNLIRPATSSSQLISIRLELSLSQLISVNEREQIMTTSIWLKQEWTDYRLAWNSSCYEGVNILRIPAKRVWLPDIVLYNNADGTYEVSVYTNVIVRSNGSIQWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDMVLKSPTAIMD--DFTPSGEWDIVALPGRRTVNPQD---PSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTFSIVTTVCVLNVHHRSPSTHTMASWVKECFLHKLPTFLFMKRPGLEVS------------------------------------PARVPHSSQLHLTTAEATSTSALGP--SSPSNLYGNSMYFVN---PVPATPKSAVSSHTAGLPRDARLRSSGRFRQDLQEALEGVSFIAQHLESDDRDQSVIEDWKFVAMVVDRLFLWVFVIVCILGTMGLFL 482
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|113103|sp|P19370.1|ACHB2_CARAU (RecName: Full=Neuronal acetylcholine receptor subunit beta-2; AltName: Full=GF-beta-2) HSP 1 Score: 279.256 bits (713), Expect = 9.305e-88 Identity = 165/489 (33.74%), Postives = 252/489 (51.53%), Query Frame = 0 Query: 2 EKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLS 474 E+YN L RP N+S+ + + ++L Q+I V EW D +VW+ +EY I+ +R+P Q +W PD+++YN+AD ++ ++ N VV++ G ++PP I+KS C I++ FPFD Q+C +KF SWTY+ +LDLV+ +D D Y +GEW ++ +PG++NE D YLD+T+ I+R+ L+Y NLI+PCVLI S+A+L F LP D GEK++L +++LL+LTVFL +S +P TS PL+G Y M +V S+VT++ +LN HHR TH MP WV+CVFL +P L M RPG R+ +++ K + L + P VG L P G F + D+ + G +R I + ++ ++D I DWK+ AMV+DRL L IF + T+ + + Sbjct: 10 ERYNKLIRPAVNKSQQVTIGIKVSLAQLISVNEREQIMTTNVWLTQEWTDYRLVWDPNEYEGIKKLRIPSQHIWLPDIVLYNNADGVYEVSFYCNAVVSNTGDIFWLPPAIYKSACAIEVRNFPFDQQNCTLKFRSWTYDRTELDLVLTSDFASRD--DYTPSGEWDIVSLPGRKNE---DPNDLTYLDITYDFVIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKVTLCMSVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHYMPEWVKCVFLHKLPAFLLMRRPGRSNVRERFRRKHQRKSFSSHQDGDSFFLTD-------------------DPGRVCGAWRVGDL-----PEGSEFRQRVKVRHDQDVDEAIDG----------------------------VRFIAEHMKIEDDDEGIIEDWKYVAMVIDRLFLWIFILVCVVGTLGLFVQ 441
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|113105|sp|P17787.1|ACHB2_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit beta-2; Flags: Precursor) HSP 1 Score: 280.026 bits (715), Expect = 1.336e-87 Identity = 169/488 (34.63%), Postives = 262/488 (53.69%), Query Frame = 0 Query: 3 KYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLS 474 +YN L RP N SE + + ++L Q+I V EW+D + W E+ N++ +R+P + +W PDV++YN+AD ++ ++ +N VV+ +GS ++PP I+KS CKI++ FPFD Q+C MKF SWTY+ ++DLV+ ++ D + +GEW ++ +PG+RNE D Y+D+T+ IRR+ L+Y NLI+PCVLI S+A+L F LP D GEK++L +++LL+LTVFL +S +P TS D PL+G Y M +V S+VT++ +LN HHR TH M WV+ VFL+ +P +L M +P R+ + ++ + + + + +L FR + + S G G+ P PV G P G G G L + +R I D +R ++D ++ DWK+ AMV+DRL L IF F + TI + L Sbjct: 41 RYNKLIRPATNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEEFDNMKKVRLPSKHIWLPDVVLYNNADGMYEVSFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLD--DFTPSGEWDIVALPGRRNENPDD---STYVDITYDFIIRRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMAPWVKVVFLEKLPALLFMQQPRHHCARQRLRLRRRQR----EREGAGALF---------FREAPGADSCTCFVNRASVQGLAGAFGAEPAPVAG------------PGRSGEPCGCG------------------LREAVDGVRFIADHMRSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQ 480
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314909|ref|XP_023339141.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X6 [Eurytemora affinis]) HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0 Identity = 368/496 (74.19%), Postives = 409/496 (82.46%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLT+FLNTVS +P+TSD+PL+GTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQILTTNIWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTIFLNTVSAIIPITSDSPLIGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 525
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314907|ref|XP_023339140.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X5 [Eurytemora affinis]) HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0 Identity = 368/496 (74.19%), Postives = 409/496 (82.46%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLT+FLNTVS +P+TSD+PL+GTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTIFLNTVSAIIPITSDSPLIGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 525
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314915|ref|XP_023339144.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X9 [Eurytemora affinis]) HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0 Identity = 365/496 (73.59%), Postives = 407/496 (82.06%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF +VSD+MP+TS PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+RV+ LPP + + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQESVSDSMPITSLQIPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRVSGNLPPQQEE--------------VPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 515
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314903|ref|XP_023339138.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0 Identity = 367/497 (73.84%), Postives = 407/497 (81.89%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF +VSD+MP+TS PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQILTTNIWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQESVSDSMPITSLQIPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 526
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314897|ref|XP_023339134.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Eurytemora affinis] >gi|1325314905|ref|XP_023339139.1| neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0 Identity = 367/497 (73.84%), Postives = 407/497 (81.89%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF +VSD+MP+TS PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQESVSDSMPITSLQIPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 526
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325263610|ref|XP_023333973.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 693.345 bits (1788), Expect = 0.000e+0 Identity = 339/495 (68.48%), Postives = 390/495 (78.79%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 LE YN LERPV NE+E++ L+FGLTLQQIIDV EW D N+ WN SEYGN+ D+R+PP+ +WKPD+LMYNSADEAFD TY TN+V+ + G+CTYIPPGIFKSTCKIDITWFPFDDQ+CEMKFGSWTY+G KLDL + ++ +GD STY+ NGEWHLL VP R+EVFY+CCP+PYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLN VS+TMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRL+ TH MP WVR +FLQWIPWMLRM RPGEKIT K+I+MQNKM+ELD KE SSKSLLANVLDMDDDFRP + HS P H + H GGF+RVT P + FP G+ +EL+LILKE+R+ITDKI++ ++++AIENDWKFAAMVLDRLCLI FT FT+ ATIAVL +APH+IV Sbjct: 33 LENYNKLERPVINETEAVVLSFGLTLQQIIDVDEKNQILTTNIWLNLEWNDANLKWNASEYGNVADVRIPPKYIWKPDLLMYNSADEAFDSTYSTNIVLTNEGACTYIPPGIFKSTCKIDITWFPFDDQECEMKFGSWTYDGGKLDLKLKSE--RGDTSTYILNGEWHLLDVPASRHEVFYECCPDPYLDITFFIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNMVSETMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLSHTHEMPEWVRMLFLQWIPWMLRMSRPGEKITLKSILMQNKMRELDTKENSSKSLLANVLDMDDDFRPGGS-THSTFFPTHNNMVHK-----------NGGFIRVTHNTQPFE------------------DTFPTGIQKELNLILKEIRIITDKIKEHDESSAIENDWKFAAMVLDRLCLITFTMFTLIATIAVLAAAPHVIV 495
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314913|ref|XP_023339143.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X8 [Eurytemora affinis]) HSP 1 Score: 691.034 bits (1782), Expect = 0.000e+0 Identity = 365/497 (73.44%), Postives = 406/497 (81.69%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LD + ++ +GD+ TYV NGEW LLGVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF +VSD+MP+TS PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDFQLKDE--KGDLGTYVLNGEWDLLGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQESVSDSMPITSLQIPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 525
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314911|ref|XP_023339142.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X7 [Eurytemora affinis]) HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0 Identity = 361/496 (72.78%), Postives = 404/496 (81.45%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTI+LS+T++ V DT+PV+ PL+GTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTIMLSITIYATIVGDTLPVSDATPLIGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 525
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314901|ref|XP_023339137.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0 Identity = 363/497 (73.04%), Postives = 405/497 (81.49%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLG+T+LLSLTVF + V++T+P SD P LGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQILTTNIWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGITVLLSLTVFQSIVTETLPQVSDAIPALGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 526
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314899|ref|XP_023339135.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 688.723 bits (1776), Expect = 0.000e+0 Identity = 363/497 (73.04%), Postives = 405/497 (81.49%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLG+T+LLSLTVF + V++T+P SD P LGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGITVLLSLTVFQSIVTETLPQVSDAIPALGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 526 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold220_size252247:170730..190410+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold220_size252247-snap-gene-1.22 ID=maker-scaffold220_size252247-snap-gene-1.22|Name=nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor|organism=Tigriopus kingsejongensis|type=gene|length=19681bp|location=Sequence derived from alignment at scaffold220_size252247:170730..190410+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor' has the following synonyms
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