nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor, maker-scaffold220_size252247-snap-gene-1.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000006524 (supercontig:LSalAtl2s:LSalAtl2s357:373959:378480:-1 gene:EMLSAG00000006524 transcript:EMLSAT00000006524 description:"augustus_masked-LSalAtl2s357-processed-gene-3.1") HSP 1 Score: 154.836 bits (390), Expect = 4.650e-41 Identity = 92/343 (26.82%), Postives = 179/343 (52.19%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTL--------QQIIDVE------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSAD-EAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVM-NNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVM-PNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKE 325 LEKY+ PV N S+++ ++ G++L + +DV+ W D + W+ S+Y N+ I ++W+PD+L YN+A+ E+ + ++T+ +V+ G ++PP K+ C++D+ +P D Q C +KFGSWT + ++DL + N + Y ++ EW +L +N V Y P+ Y D+TF+ ++R + Y + +I+PC++ M+ F LP +S EKL L + ++L + +P S P+L +++ + ++ +++V +++LN HV P ++R +F + L + +I+ +Q + +D+ E Sbjct: 271 LEKYDKEVHPVSNHSDTVVVSVGMSLIHLDINELKSTMDVDAWMRFTWIDEYLSWDPSDYENLTKIHFSEDEIWQPDILPYNNANPESLNPYHKTSFLVHHTGDVLWVPPVHLKAFCRLDLKMWPLDTQTCSLKFGSWTSHANQIDLALFKNATVVEKIDFYTKDREWVVLNTTVVKNSVSYVEHPDIYADITFSFNMKRISQSYKYVIILPCLVTMLMSTCSFGLPSNSHEKLFLNGIAFIVCVLYLVYFATILPFQSSTVPILVKFYSNTVVLIGAAIVINVIVLNMTQ--VRKHVYPPKFLRIIFAGPLGKCLCLDHXRHQISSTHTRLQVNNELIDMAE 611
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000001199 (supercontig:LSalAtl2s:LSalAtl2s119:5078:7517:-1 gene:EMLSAG00000001199 transcript:EMLSAT00000001199 description:"maker-LSalAtl2s119-snap-gene-0.6") HSP 1 Score: 130.568 bits (327), Expect = 3.828e-34 Identity = 109/379 (28.76%), Postives = 171/379 (45.12%), Query Frame = 0 Query: 138 EGQ-GDVSTYVENGEWHLLGVPGQRNEVFYDC--CPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWML----------RMGRP---GEKIT-----------RKTIMMQNKMKELDLKERSSKSLLANVLDM--------DDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGL---PPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHI 478 EG+ GD S Y NGE+ L G QRN V Y C C PY D+TFTI IRRR L+Y FNLI+PCVLI +A+L F +P +SGEK++LG++ LLS+TVFL T+ +++ Y+ + +V+ + + LN HHR + +P V+ + L + + R+ P G I+ ++M N+ L + + L M D+ + + HPH H F ++ GL PP P++ N +V ++A S+ E R+ + +D IE WK ++++DRL L++F A++ +L S+PH+ Sbjct: 6 EGETGDTSNYQANGEFVLEGFQSQRNVVNYTCNGCDAPYPDITFTIIIRRRPLFYVFNLILPCVLINGIALLVFYVPSESGEKVTLGISALLSMTVFLMTIRESL-----------YYGVSICLVSFASAMAXVTLNIHHRGIRGNEVPPSVKNIILNQLGKLFFFQFDSDTKERIIPPPHFGGSISSGINNGSAGAPEHSMMTLNRSATLSRPTQRADPYLVPSHGMESTCWNNADNHIGSRRSFSVAEDHPHFTEDGH---------------FCQLNGGLSVPPPLPSEP-----NISVNFMERISA---------SIEKAERRIAQSEHKD-----LIEAQWKQVSLIIDRLLLLVFFLAMSIASLVILTSSPHL 339
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000008789 (supercontig:LSalAtl2s:LSalAtl2s546:116340:118829:1 gene:EMLSAG00000008789 transcript:EMLSAT00000008789 description:"maker-LSalAtl2s546-augustus-gene-1.9") HSP 1 Score: 86.2705 bits (212), Expect = 1.726e-19 Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = 0 Query: 30 IDVEWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTL 187 + + W D +VW ++ I +R+P KLWKPD++ Y D + + N +V SNG Y+P + C + +C +K+GSWT++ ++LV D D+S +V+ L V + Y+CCPEPY + +T+K++R+ L Sbjct: 71 VHMSWMDDRLVWTPEDHEGINQLRVPINKLWKPDIVPYIKKDIT-EIQEEFNAIVYSNGKILYVPDTKLRIDCDNANLTDVWAVNECTIKYGSWTFDNDMMELVQFKD--PVDISEFVKLCPIKTLDVMKELKLKIYECCPEPYASLDYTLKLQRKFL 225
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000000486 (supercontig:LSalAtl2s:LSalAtl2s1075:141499:142154:-1 gene:EMLSAG00000000486 transcript:EMLSAT00000000486 description:"snap_masked-LSalAtl2s1075-processed-gene-0.7") HSP 1 Score: 74.3294 bits (181), Expect = 1.085e-15 Identity = 43/131 (32.82%), Postives = 66/131 (50.38%), Query Frame = 0 Query: 3 KYNNLERPVYNESESLKLAFG---LTLQQIIDVEWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKL 130 K N E + E SL L FG L + +I + W D WN ++ +I+ I +P K+W P+V++ N+ E F ++ +V SNG Y+ S CK + +PF Q C +KFGSW +K+ Sbjct: 55 KRNKTEIDLSLEVTSLDLNFGEGELKVDGLITLRWNDQRYKWNPEDFEDIDSIELPFSKVWSPEVILLNARVEKF--IHRQIGIVKSNGDIIYLLSMHSSSNCKPNFEKYPFGIQTCALKFGSWRNQHYKV 183
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000001191 (supercontig:LSalAtl2s:LSalAtl2s119:41853:66097:-1 gene:EMLSAG00000001191 transcript:EMLSAT00000001191 description:"augustus_masked-LSalAtl2s119-processed-gene-0.1") HSP 1 Score: 60.077 bits (144), Expect = 2.526e-11 Identity = 26/75 (34.67%), Postives = 43/75 (57.33%), Query Frame = 0 Query: 10 PVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNS 69 PV N S L ++ G++L IIDV+ W+D ++ WN S++G I IR+P ++W+PD+++YN Sbjct: 31 PVENSSTPLDVSLGVSLHHIIDVDEKNQIITTNCWITQTWRDTHLTWNASDFGGIRTIRLPFDRVWRPDIILYNK 105
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 63.5438 bits (153), Expect = 4.867e-11 Identity = 50/248 (20.16%), Postives = 109/248 (43.95%), Query Frame = 0 Query: 19 KLAFGLTLQQIIDVEWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTN--VVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPG-QRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDS-GEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYF-NCIMFMVAS 261 +++ T+ ++ WKD + ++ E + +K+W PD N + + N V ++ +G+ TY C +D+ ++P D Q+C ++ S+ Y + + G VE+ + + G + NE Y ++ + K++R Y+ F +P +LI ++ + F + ++ +++LG+T +L++T V ++P S + Y C +F+ A+ Sbjct: 120 EVSMDYTITMYLNQYWKDERLSFSTEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRQKPVVG-----VEDAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 362
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000009437 (supercontig:LSalAtl2s:LSalAtl2s603:238594:257708:1 gene:EMLSAG00000009437 transcript:EMLSAT00000009437 description:"snap_masked-LSalAtl2s603-processed-gene-2.4") HSP 1 Score: 58.5362 bits (140), Expect = 1.277e-10 Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 0 Query: 70 ADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKL 130 AD+ ++ +V NG + PP F+STC +D+ +FPFDDQ C +K GSW ++GF + Sbjct: 31 ADDFSTEYMRSLALVEHNGLVFWPPPTKFRSTCPVDVAFFPFDDQICMLKLGSWIHDGFSI 91
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000007149 (supercontig:LSalAtl2s:LSalAtl2s402:878025:878915:1 gene:EMLSAG00000007149 transcript:EMLSAT00000007149 description:"maker-LSalAtl2s402-snap-gene-8.11") HSP 1 Score: 58.151 bits (139), Expect = 7.184e-10 Identity = 43/158 (27.22%), Postives = 70/158 (44.30%), Query Frame = 0 Query: 30 IDVEWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTL 187 I + W D +VWN ++ I +R+ + + E F N +V SNG YIP + C + +C +K+GSWT++ ++LV + DVS +V+ L V + Y CCPE Y +T+K++R+ L Sbjct: 71 IHMSWMDDRLVWNPEDHKGINQLRLI--NCGSQTLCHISKIQEEF------NALVYSNGKVLYIPDTKLRLYCDNANLTDVWAVHECNIKYGSWTFDNNLMELV--EIKHPVDVSEFVKFCPMKTLEVIKELKIKAYVCCPEHYASFDYTLKLQRKFL 218
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000003233 (supercontig:LSalAtl2s:LSalAtl2s178:159770:165601:1 gene:EMLSAG00000003233 transcript:EMLSAT00000003233 description:"augustus_masked-LSalAtl2s178-processed-gene-1.1") HSP 1 Score: 58.151 bits (139), Expect = 9.451e-10 Identity = 43/167 (25.75%), Postives = 71/167 (42.51%), Query Frame = 0 Query: 22 FGLTLQQI-IDVEWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEA-FDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTY-VENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRR 185 +GL I + W D + WN S +E + +P +WKPD++ + D +D Y V NG ++P FK C C ++FGSWTY+ ++L + D STY + +L R + P+ Y+ + F +K+ +R Sbjct: 70 YGLVFGNIWYKINWYDPRLTWNSSS--GVESLSLPNDLIWKPDIVPFFGRDGTHYDSKYPVKVF--PNGMVLFVPSVEFKHRCFRQTKRSARKIIRCNVEFGSWTYDSEIMNLNFFGGKASVDTSTYDFDFCPTKILQSTATRKVKKIEGYPKSYVSLIFHLKLVKR 232
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 56.9954 bits (136), Expect = 6.075e-9 Identity = 57/225 (25.33%), Postives = 96/225 (42.67%), Query Frame = 0 Query: 57 QKLWKPDVLMYNSADEAFDGTYQTNVVVN------SNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNND-EGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDS-GEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCI-MFMVASSVVTTIMILNY 272 +K+W+PD N A T+QT + N + + Y+ +C + +P D Q C ++ S ++ DL+ D E DV +E + L+ Y L+V F K +RR YY F+ VP LI M+ + F + P++ +++LGVT LL+L+ ++P S Y I +FM +V + ++ Y Sbjct: 76 EKIWRPDSFFKN----AKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHT--TDDLIFTWDKEMPLDVDKGIELPQLELISTKSDDCTTVYSTGQFTCLEVVF--KFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVS-------YIKAIDVFMSGCTVFVFLSLMEY 285
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|113067|sp|P22770.1|ACHA7_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 428.713 bits (1101), Expect = 1.519e-145 Identity = 221/499 (44.29%), Postives = 296/499 (59.32%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRE----LSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHII 479 L+ YN LERPV N+S+ L + F L+L QI+DV+ W D + WN SEY ++++R P +WKPD+L+YNSADE FD T+ TNV+VNS+G C Y+PPGIFKS+C ID+ WFPFD Q C +KFGSWTY G+ LDL M + D+S Y+ NGEW L+G+PG+R E FY+CC EPY D+TFT+ +RRRTLYY NL++PCVLI+++A+L F LP DSGEK+SLG+T+LLSLTVF+ V++ MP TSD+ PL+ YF M +V SVV T+++L YHH D MP W R + L W W LRM RPGE R + + L E ++ S G S + GF + P D G++ G T N G E L+ IL+E+R I ++ RD ++ AI N+WKFAA V+DRLCL+ F+ FTI TI +L+SAP+ + Sbjct: 34 LKNYNPLERPVANDSQPLTVYFTLSLMQIMDVDEKNQVLTTNIWLQMYWTDHYLQWNVSEYPGVKNVRFPDGLIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQKCNLKFGSWTYGGWSLDLQMQ----EADISGYISNGEWDLVGIPGKRTESFYECCKEPYPDITFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLSSMEMNTVS----------------------------------GQQCSNGNMLYIGFRGLDGVHCTPTTDSGVICGRMTCSPTEEENLLHSGHPSEGDPDLAKILEEVRYIANRFRDQDEEEAICNEWKFAASVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|1351844|sp|P48180.1|ACH1_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type acr-16; Flags: Precursor) HSP 1 Score: 424.476 bits (1090), Expect = 6.108e-144 Identity = 226/498 (45.38%), Postives = 302/498 (60.64%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDF-RPSSTLPHSHMHPHHPSHTHSVG--PLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHII 479 + YNNLERPV N SE + + + LQQIIDV+ W D N+VW+K+EYGNI D+R P K+WKPDVL+YNS D FD TYQTN++V S G ++PPGIFK +CKIDI WFPFD+Q C KFGSWTY+G+KLDL G D+S Y+ NGEW L +RNE FYDCCPEPY DV F + +RRRTLYY FNLI+PC+L M +LGFTLPPD+GEK++L +T+LLS+ FL+ VS+ P TS+ PLLG +F C M +V +S V T+ +LN H+R +TH M W R + L WIPW+LRM RPG +T ++ K R S+SL+ N+ D + R +S ++ + + + S G LGS P+ M+ NGT S A +HR I EL+++T ++ + + N+WKFAAMV+DRLCL +FT F I +TI + SAP+++ Sbjct: 31 MRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLVWDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGYKLDL--QPATGGFDISEYISNGEWALPLTTVERNEKFYDCCPEPYPDVHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWTRNLLLYWIPWILRMKRPGHNLTYASLPSLFSTK----PNRHSESLIRNIKDNEHSLSRANSFDADCRLNQYIMTQSVSNGLTSLGSIPS--------------------TMISSNGTTTDVSQ-QATLLILHR----IYHELKIVTKRMIEGDKEEQACNNWKFAAMVVDRLCLYVFTIFIIVSTIGIFWSAPYLV 497
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|224487629|sp|A8WQK3.2|ACH1_CAEBR (RecName: Full=Acetylcholine receptor subunit alpha-type acr-16; Flags: Precursor) HSP 1 Score: 422.165 bits (1084), Expect = 6.520e-143 Identity = 223/499 (44.69%), Postives = 302/499 (60.52%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDF-RPSSTLPHSHMHPHHPSHTHSVG--PLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 + YNNLERPV N SE + + + LQQIIDV+ WKD N+VW+++EYGNI D+R P K+WKPDVL+YNS D FD TYQTN++V S+G ++PPGIFK +CKIDI WFPFD+Q C KFGSWTY+G+KLDL G D+S Y+ NGEW L +RNE FYDCCPEPY DV F + +RRRTLYY FNLI+PC+L M +LGFTLPPD+GEK++L +T+LLS+ FL+ VS+ P TS+ PLLG +F C M +V +S V T+ +LN H+R +TH M W R + L WIPW+LRM RPG +T ++ K R S+SL+ N+ D + R +S ++ + + + S G +GS P+ M+ S A +HR I EL+++T ++ + + N+WKFAAMV+DRLCL +FT F IA+TI + SAP+++ Sbjct: 31 MRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWKDYNLVWDQAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSSGLVHWVPPGIFKISCKIDIQWFPFDEQKCFFKFGSWTYDGYKLDL--QPATGGFDISEYLPNGEWALPLTTVERNEKFYDCCPEPYPDVHFYLHMRRRTLYYGFNLIMPCILTTLMTLLGFTLPPDAGEKITLQITVLLSICFFLSIVSEMSPPTSEAVPLLGIFFTCCMIVVTASTVFTVYVLNLHYRTPETHDMGPWTRNLLLYWIPWILRMKRPGHNLTYASLPSLFASK----PNRHSESLIRNIKDNEHSLSRANSFDADCRLNQYIMTQSVSNGLTSMGSIPS--------------------TMISSTNGALTDVSQQATLLILHR----IYHELKIVTKRMIEGDKEEQASNNWKFAAMVVDRLCLYVFTIFIIASTIGIFWSAPYLVA 499
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|2506127|sp|P36544.5|ACHA7_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 421.779 bits (1083), Expect = 1.086e-142 Identity = 220/498 (44.18%), Postives = 305/498 (61.24%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGG---GFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHII 479 ++ YN LERPV N+S+ L + F L+L QI+DV+ W D + WN SEY ++ +R P ++WKPD+L+YNSADE FD T+ TNV+VNS+G C Y+PPGIFKS+C ID+ WFPFD Q C++KFGSW+Y G+ LDL M + D+S Y+ NGEW L+G+PG+R+E FY+CC EPY DVTFT+ +RRRTLYY NL++PCVLI+++A+L F LP DSGEK+SLG+T+LLSLTVF+ V++ MP TSD+ PL+ YF M +V SVV T+++L YHH D MP W R + L W W LRM RPGE R + + L E S+ + P+S ++ H V PTP G G M + P D+ ++ G PP +L+ IL+E+R I ++ R +++ A+ ++WKFAA V+DRLCL+ F+ FTI TI +L+SAP+ + Sbjct: 34 VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ----EADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAP-----------PPASNGNLLYIGFRGLDGVHCV------PTPDSGVVCGRMACS-----PTHDEHLLHGGQ-----------PPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|146345356|sp|Q05941.2|ACHA7_RAT (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 421.394 bits (1082), Expect = 1.349e-142 Identity = 216/499 (43.29%), Postives = 300/499 (60.12%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLN----AFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHII 479 ++ YN LERPV N+S+ L + F L+L QI+DV+ W D + WN SEY ++++R P ++WKPD+L+YNSADE FD T+ TNV+VN++G C Y+PPGIFKS+C ID+ WFPFD Q C++KFGSW+Y G+ LDL M + D+S+Y+ NGEW L+G+PG+RNE FY+CC EPY DVT+T+ +RRRTLYY NL++PCVLI+++A+L F LP DSGEK+SLG+T+LLSLTVF+ V++ MP TSD+ PL+ YF M +V SVV T+++L YHH D MP W R + L W W LRM RPGE R + + L E S+ + GP S + GF + P D G+V G + A P +L+ IL+E+R I ++ R +++ I ++WKFAA V+DRLCL+ F+ FTI TI +L+SAP+ + Sbjct: 34 VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQ----EADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCSLASVELSAGA----------------------------------GPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCGRLACSPTHDEHLMHGAHPSDGDPDLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|66774011|sp|Q866A2.1|ACHA7_MACMU (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 420.239 bits (1079), Expect = 3.625e-142 Identity = 217/499 (43.49%), Postives = 302/499 (60.52%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAF----PPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHII 479 ++ YN LERPV N+S+ L + F L+L QI+DV+ W D + WN SEY ++ +R P ++WKPD+L+YNSADE FD T+ TNV+VNS+G C Y+PPGIFKS+C ID+ WFPFD Q C++KFGSW+Y G+ LDL M + D+S Y+ +GEW L+G+PG+R+E FY+CC EPY DVTFT+ +RRRTLYY NL++PCVLI+++A+L F LP DSGEK+SLG+T+LLSLTVF+ V++ MP TSD+ PL+ YF M +V SVV T+++L YHH D MP W R + L W W LRM RPGE R Q+K + L +++ S + P P S + GF + P D G+V G + PP +L+ IL+E+R I ++ R +++ A+ ++WKFAA V+DRLCL+ F+ FTI TI +L+SAP+ + Sbjct: 34 VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNVSEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ----EADISGYIPSGEWDLVGIPGKRSEKFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPAC--QHKQRRCSL----------------------ASVEMSAVAP----------PPASNGNLLYIGFRGLDGMHCAPTPDSGVVCGRMACSPTHDEHLLHGGQPPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|1351851|sp|P49582.1|ACHA7_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 419.853 bits (1078), Expect = 4.604e-142 Identity = 215/499 (43.09%), Postives = 299/499 (59.92%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLN----AFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHII 479 ++ YN LERPV N+S+ L + F L+L QI+DV+ W D + WN SEY ++++R P ++WKPD+L+YNSADE FD T+ TNV+VN++G C Y+PPGIFKS+C ID+ WFPFD Q C++KFGSW+Y G+ LDL M + D+S+Y+ NGEW L+G+PG+RNE FY+CC EPY DVT+T+ +RRRTLYY NL++PCVLI+++A+L F LP DSGEK+SLG+T+LLSLTVF+ V++ MP TSD+ PL+ YF M +V SVV T+++L YHH D MP W R + L W W LRM RPGE R + + L E S+ + GP S + GF + P D G+V G + P +L+ IL+E+R I ++ R +++ I ++WKFAA V+DRLCL+ F+ FTI TI +L+SAP+ + Sbjct: 34 VKNYNPLERPVANDSQPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMSWTDHYLQWNMSEYPGVKNVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNASGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQ----EADISSYIPNGEWDLMGIPGKRNEKFYECCKEPYPDVTYTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLRYHHHDPDGGKMPKWTRIILLNWCAWFLRMKRPGEDKVRPACQHKPRRCSLASVELSAGA----------------------------------GPPTSNGNLLYIGFRGLEGMHCAPTPDSGVVCGRLACSPTHDEHLMHGTHPSDGDPDLAKILEEVRYIANRFRCQDESEVICSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 494
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|1703074|sp|P54131.1|ACHA7_BOVIN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-7; Flags: Precursor) HSP 1 Score: 419.853 bits (1078), Expect = 5.190e-142 Identity = 218/499 (43.69%), Postives = 295/499 (59.12%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRE----LSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHII 479 ++ YN LERPV N+S L + F L+L QI+DV+ W D + WN SEY ++ +R P ++WKPD+L+YNSADE FD T+ TNV+VNS+G C Y+PPGIFKS+C ID+ WFPFD Q C++KFGSW+Y G+ LDL M + D+S Y+ NGEW L+GV G+R+E FY+CC EPY DVTFT+ IRRRTLYY NL++PCVLI+++A+L F LP DSGEK+SLG+T+LLSLTVF+ V++ MP TSD+ PL+ YF M +V SVV T+++L YHH D MP W R V L W W LRM RPGE R + L E S+ + GP + + GF + + P D G+V G + G E L+ IL+E+R I + R +++ A+ ++WKFAA V+DRLCL+ F+ FTI TI +L+SAP+ + Sbjct: 31 VKNYNPLERPVANDSLPLTVYFSLSLLQIMDVDEKNQVLTTNIWLQMTWTDHYLQWNASEYPGVKTVRFPDGQIWKPDILLYNSADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQQCKLKFGSWSYGGWSLDLQMQ----EADISGYIPNGEWDLVGVLGKRSEKFYECCKEPYPDVTFTVSIRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVVLLNWCAWFLRMKRPGEDKVRPACQHNERRCSLASVEMSAVA----------------------------------GPPATNGNLLYIGFRGLDTMHCAPTPDSGVVCGRVACSPTHDEHLLHAGQPSEGDPDLAKILEEVRYIAHRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTILCTIGILMSAPNFV 491
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|91208254|sp|Q494W8.1|CRFM7_HUMAN (RecName: Full=CHRNA7-FAM7A fusion protein; AltName: Full=CHRNA7-DR1; AltName: Full=D-10) HSP 1 Score: 355.91 bits (912), Expect = 3.258e-118 Identity = 186/414 (44.93%), Postives = 255/414 (61.59%), Query Frame = 0 Query: 70 ADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGG---GFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHII 479 ADE FD T+ TNV+VNS+G C Y+PPGIFKS+C ID+ WFPFD Q C++KFGSW+Y G+ LDL M + D+S Y+ NGEW L+G+PG+R+E FY+CC EPY DVTFT+ +RRRTLYY NL++PCVLI+++A+L F LP DSGEK+SLG+T+LLSLTVF+ V++ MP TSD+ PL+ YF M +V SVV T+++L YHH D MP W R + L W W LRM RPGE R + + L E S+ + P+S ++ H V PTP G G M + P D+ ++ G PP +L+ IL+E+R I ++ R +++ A+ ++WKFAA V+DRLCL+ F+ FTI TI +L+SAP+ + Sbjct: 28 ADERFDATFHTNVLVNSSGHCQYLPPGIFKSSCYIDVRWFPFDVQHCKLKFGSWSYGGWSLDLQMQ----EADISGYIPNGEWDLVGIPGKRSERFYECCKEPYPDVTFTVTMRRRTLYYGLNLLIPCVLISALALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFASTMIIVGLSVVVTVIVLQYHHHDPDGGKMPKWTRVILLNWCAWFLRMKRPGEDKVRPACQHKQRRCSLASVEMSAVAP-----------PPASNGNLLYIGFRGLDGVHCV------PTPDSGVVCGRMACS-----PTHDEHLLHGGQ-----------PPEGDPDLAKILEEVRYIANRFRCQDESEAVCSEWKFAACVVDRLCLMAFSVFTIICTIGILMSAPNFV 404
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Match: gi|21264395|sp|P45963.2|ACR7_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type acr-7; Flags: Precursor) HSP 1 Score: 316.62 bits (810), Expect = 3.095e-101 Identity = 181/503 (35.98%), Postives = 273/503 (54.27%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDVE---------------WKDVNMVWNKSEYGNIEDIRMPPQ-KLWKPDVLMYNS----ADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQ---GDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPP-DSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFM-----RVTSGLPPPPADDGMVGGNGTVG-GGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTF-FTIAATIAV 471 L Y+ L RPV N ++L + + +QQ++ V+ W D + WN +Y NI +R + ++W+PD+L+YN E+FD TY+TN V S+G +IPPGIFK +CK+DIT FPFD+Q C MKFGSWTY+GF LDL ++ +GQ D+STY+ NGEWHLL P +R E FY CC EPY V F + +RRRT YY FN+++P +L++ M++L F LP D EK+ L TILLS+ FL +S+ P TS+ PLLG +F+ + F+VA S TI++LN +R H + R +FL+ +PW++ M RP K R + + + ++++ L ++L D+ + + +P P+ T S+ VG G ++ GM+ ++ GS L + + +++ ++ I +I I+++WKFAA +DR CLIIFT F I I V Sbjct: 39 LTNYSYLVRPVRNPKKALTVTMKVFIQQVLLVDAKHQMIEVNAWLKYIWTDFRLRWNPLDYENITSVRFQGEDQIWQPDILLYNRYIEDEQESFDITYKTNAVAYSDGVINWIPPGIFKLSCKMDITLFPFDEQICFMKFGSWTYHGFALDLRLDVVKGQEPSADLSTYITNGEWHLLSAPARREEKFYKCCKEPYPTVKFYLHLRRRTFYYVFNVVLPTLLVSFMSLLAFCLPATDLSEKIGLQTTILLSVCFFLTILSEMTPTTSEAVPLLGVFFSALTFIVAMSTTFTILVLNIRYRQITNHYLSPMFRSIFLECLPWLMMMKRPDHKFRRGSSYRDSSADQCVQCAKNAE--LKSILRGTDN---QQQIETNTFYP-FPTETLSLN------RKVGDGLFIQRRCQIHEEARSEKFTHGMLACEKSLRENGSELANILVTILKMYEVMVSQVERIRKRIALKRKRKDIQDEWKFAAQAVDRFCLIIFTIVFIICCFIFV 529
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314909|ref|XP_023339141.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X6 [Eurytemora affinis]) HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0 Identity = 368/496 (74.19%), Postives = 409/496 (82.46%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLT+FLNTVS +P+TSD+PL+GTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQILTTNIWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTIFLNTVSAIIPITSDSPLIGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 525
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314907|ref|XP_023339140.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X5 [Eurytemora affinis]) HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0 Identity = 368/496 (74.19%), Postives = 409/496 (82.46%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLT+FLNTVS +P+TSD+PL+GTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTIFLNTVSAIIPITSDSPLIGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 525
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314915|ref|XP_023339144.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X9 [Eurytemora affinis]) HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0 Identity = 365/496 (73.59%), Postives = 407/496 (82.06%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF +VSD+MP+TS PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+RV+ LPP + + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQESVSDSMPITSLQIPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRVSGNLPPQQEE--------------VPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 515
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314903|ref|XP_023339138.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0 Identity = 367/497 (73.84%), Postives = 407/497 (81.89%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF +VSD+MP+TS PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQILTTNIWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQESVSDSMPITSLQIPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 526
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314897|ref|XP_023339134.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Eurytemora affinis] >gi|1325314905|ref|XP_023339139.1| neuronal acetylcholine receptor subunit alpha-7-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0 Identity = 367/497 (73.84%), Postives = 407/497 (81.89%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF +VSD+MP+TS PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQESVSDSMPITSLQIPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 526
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325263610|ref|XP_023333973.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 693.345 bits (1788), Expect = 0.000e+0 Identity = 339/495 (68.48%), Postives = 390/495 (78.79%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTSGLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 LE YN LERPV NE+E++ L+FGLTLQQIIDV EW D N+ WN SEYGN+ D+R+PP+ +WKPD+LMYNSADEAFD TY TN+V+ + G+CTYIPPGIFKSTCKIDITWFPFDDQ+CEMKFGSWTY+G KLDL + ++ +GD STY+ NGEWHLL VP R+EVFY+CCP+PYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLN VS+TMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRL+ TH MP WVR +FLQWIPWMLRM RPGEKIT K+I+MQNKM+ELD KE SSKSLLANVLDMDDDFRP + HS P H + H GGF+RVT P + FP G+ +EL+LILKE+R+ITDKI++ ++++AIENDWKFAAMVLDRLCLI FT FT+ ATIAVL +APH+IV Sbjct: 33 LENYNKLERPVINETEAVVLSFGLTLQQIIDVDEKNQILTTNIWLNLEWNDANLKWNASEYGNVADVRIPPKYIWKPDLLMYNSADEAFDSTYSTNIVLTNEGACTYIPPGIFKSTCKIDITWFPFDDQECEMKFGSWTYDGGKLDLKLKSE--RGDTSTYILNGEWHLLDVPASRHEVFYECCPDPYLDITFFIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNMVSETMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLSHTHEMPEWVRMLFLQWIPWMLRMSRPGEKITLKSILMQNKMRELDTKENSSKSLLANVLDMDDDFRPGGS-THSTFFPTHNNMVHK-----------NGGFIRVTHNTQPFE------------------DTFPTGIQKELNLILKEIRIITDKIKEHDESSAIENDWKFAAMVLDRLCLITFTMFTLIATIAVLAAAPHVIV 495
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314913|ref|XP_023339143.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X8 [Eurytemora affinis]) HSP 1 Score: 691.034 bits (1782), Expect = 0.000e+0 Identity = 365/497 (73.44%), Postives = 406/497 (81.69%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTS-DNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LD + ++ +GD+ TYV NGEW LLGVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVT+LLSLTVF +VSD+MP+TS PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDFQLKDE--KGDLGTYVLNGEWDLLGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQESVSDSMPITSLQIPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 525
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314911|ref|XP_023339142.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X7 [Eurytemora affinis]) HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0 Identity = 361/496 (72.78%), Postives = 404/496 (81.45%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDNPLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTI+LS+T++ V DT+PV+ PL+GTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTIMLSITIYATIVGDTLPVSDATPLIGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 525
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314901|ref|XP_023339137.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0 Identity = 363/497 (73.04%), Postives = 405/497 (81.49%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLG+T+LLSLTVF + V++T+P SD P LGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQILTTNIWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGITVLLSLTVFQSIVTETLPQVSDAIPALGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 526
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Match: gi|1325314899|ref|XP_023339135.1| (neuronal acetylcholine receptor subunit alpha-7-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 688.723 bits (1776), Expect = 0.000e+0 Identity = 363/497 (73.04%), Postives = 405/497 (81.49%), Query Frame = 0 Query: 1 LEKYNNLERPVYNESESLKLAFGLTLQQIIDV---------------EWKDVNMVWNKSEYGNIEDIRMPPQKLWKPDVLMYNSADEAFDGTYQTNVVVNSNGSCTYIPPGIFKSTCKIDITWFPFDDQDCEMKFGSWTYNGFKLDLVMNNDEGQGDVSTYVENGEWHLLGVPGQRNEVFYDCCPEPYLDVTFTIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTILLSLTVFLNTVSDTMPVTSDN-PLLGTYFNCIMFMVASSVVTTIMILNYHHRLADTHVMPNWVRCVFLQWIPWMLRMGRPGEKITRKTIMMQNKMKELDLKERSSKSLLANVLDMDDDFRPSSTLPHSHMHPHHPSHTHSVGPLGSTPTPVGGGFMRVTS-GLPPPPADDGMVGGNGTVGGGSSLNAFPPGVHRELSLILKELRVITDKIRDDEDTAAIENDWKFAAMVLDRLCLIIFTFFTIAATIAVLLSAPHIIV 480 L YN LERPV NES+++ L FGLTLQQIIDV EW DVN+ WN+SEYGN++DIR+PP +WKPD+LMYNSA EAFDGTY TNVVV SNG C+YIPPGIFKSTCKIDITWFPFDDQ+C+MKFGSWTYNGF LDL + +D G GD STY+ NGEW L+GVP +RNEV Y+CCPEPYLD+TF I+IRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLG+T+LLSLTVF + V++T+P SD P LGTYFNCIMFMVASSVVTTIMILNYHHRLADTH MP+WVR +FLQWIPW+LRM RPGEKITRKTIMMQNKMKELDLKE+SSKSLLANVLDMDDDFRPSSTLPHSH+HPHHPSH H GGF+R S P P V GN + FPPG HRELSLILKE+++ITDKIRDDE+ AAIENDWKFAAMVLDRLCLI+FT FTI AT+AVL +APH+IV Sbjct: 43 LVNYNKLERPVVNESDAVVLTFGLTLQQIIDVDEKNQLLTANVWLNLEWTDVNLRWNESEYGNVKDIRIPPSTIWKPDILMYNSASEAFDGTYPTNVVVTSNGGCSYIPPGIFKSTCKIDITWFPFDDQNCDMKFGSWTYNGFNLDLNLKSDTG-GDTSTYILNGEWDLIGVPAKRNEVIYECCPEPYLDITFIIQIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGITVLLSLTVFQSIVTETLPQVSDAIPALGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPDWVRVLFLQWIPWLLRMSRPGEKITRKTIMMQNKMKELDLKEKSSKSLLANVLDMDDDFRPSSTLPHSHVHPHHPSHAHP--------QQNNGGFIRQMSVDREPWPR----VSGNLPPQQEEVPSTFPPGAHRELSLILKEIKIITDKIRDDEEAAAIENDWKFAAMVLDRLCLIVFTLFTIVATVAVLAAAPHVIV 526 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold220_size252247:170730..190410+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold220_size252247-snap-gene-1.22 ID=maker-scaffold220_size252247-snap-gene-1.22|Name=nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor|organism=Tigriopus kingsejongensis|type=gene|length=19681bp|location=Sequence derived from alignment at scaffold220_size252247:170730..190410+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor subunit alpha 6 isoform 4 precursor' has the following synonyms
Add to Basket
|