wd repeat-containing protein 57, maker-scaffold225_size250570-snap-gene-1.16 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000010784 (supercontig:LSalAtl2s:LSalAtl2s714:17193:18452:-1 gene:EMLSAG00000010784 transcript:EMLSAT00000010784 description:"snap_masked-LSalAtl2s714-processed-gene-0.5") HSP 1 Score: 493.426 bits (1269), Expect = 1.588e-176 Identity = 238/347 (68.59%), Postives = 284/347 (81.84%), Query Frame = 0 Query: 14 PNAGALVVKKAKTDEALAVVDDQTQLQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTIC----LWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 P+ V KK + + L V++ + A GPPRSSNLE+PIMLLSG H+GEI++AKFHPDG ILAS+GFDR IC LWNVYGECEN+ VI S H GAILDL+F+ DG Y+YT STDKTVG+FD+ T QRIKRLKGHT +VN+ HPARRG PLIVSGSDDC+I+ WDQRKR V + N VT VT+NDTADQ+I+ GIDN +KIWD+RK N LSGHTDTITG+SLSPDGSY LTN+MDNSLRIWD+RPFV +RC KI +GH+HNFEKNLL+C WSPDGAM++AGSSDRFV+IW TTSR+IL+KLPGHLG+VN++DFHK+EPI+LSASSD+ IYLGE + Sbjct: 22 PDTSVAVFKKPR--DELEVLNKKEIKVADGPPRSSNLEAPIMLLSG-HEGEIYSAKFHPDGNILASSGFDRQICRLLNLWNVYGECENFAVI-SGHTGAILDLNFS-GDGSYLYTSSTDKTVGVFDSTTGQRIKRLKGHTGFVNTCHPARRGPPLIVSGSDDCTIKTWDQRKRGCVHSFNNTFQVTGVTYNDTADQIITGGIDNDLKIWDIRK-NNIIYTLSGHTDTITGLSLSPDGSYALTNSMDNSLRIWDIRPFVTGERCVKIFSGHKHNFEKNLLRCTWSPDGAMIAAGSSDRFVHIWXTTSRRILFKLPGHLGSVNEIDFHKLEPIVLSASSDKNIYLGELD 362
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 131.724 bits (330), Expect = 3.967e-35 Identity = 86/282 (30.50%), Postives = 150/282 (53.19%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVY-GECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTL----NGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWS-PDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEP 336 H + KF P+G+ LAS+ D+ I +W Y G+ E S H I D+ ++ D + + + S DKT+ I++ ++ + +K LKGH+NYV + + L+VSGS D S+R+WD R ++TL + V++V FN ++S+ D +IWD +++ ++ + SP+G Y+L +DN+L++W+ +C K +GH++ EK + +S G + +GS D VYIW+ +++I+ KL GH V ++F + P Sbjct: 29 HTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKFEK---TISGHKLGISDVAWS-SDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LVVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDNPPVSFVKFSPNGKYILAATLDNTLKLWE----YSKGKCLKTYSGHRN--EKYCVFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVV--LNFELLFP 297 HSP 2 Score: 74.7146 bits (182), Expect = 4.964e-15 Identity = 63/218 (28.90%), Postives = 104/218 (47.71%), Query Frame = 0 Query: 145 LKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLN----GVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVND---VDFHKVEP---IILSASSDRQIYLGEF 352 L GHT V++V + GE L S +D I+VW +T++ G++ V ++ + ++SA D +KIW+L + L GH++ + + +P + V++ + D S+RIWDVR +C K + H ++ DG+++ + S D IWDT S + L L ND V F K P IL+A+ D + L E+ Sbjct: 26 LAGHTKGVSAVKFSPNGEWLASSSADKL-IKVWGSYDGKFEKTISGHKLGISDVAWSSDSRLLVSASDDKTLKIWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVR----TGKCLKTLPAHSDPVS----AVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLID-----NDNPPVSFVKFSPNGKYILAATLDNTLKLWEY 228 HSP 3 Score: 53.9138 bits (128), Expect = 3.055e-8 Identity = 34/141 (24.11%), Postives = 66/141 (46.81%), Query Frame = 0 Query: 60 SHQGEIFTAKFHPDGQILASAGFDRTICLWNVY-GECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTN--YVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNGVTSVTFN 197 +H + F+ DG ++ S+ +D +W+ G+C + N + + +G+Y+ + D T+ +++ + + +K GH N Y + + G IVSGS+D + +W+ + + VQ L G T V N Sbjct: 154 AHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDNPPVSFVKFS---PNGKYILAATLDNTLKLWEYSKGKCLKTYSGHRNEKYCVFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIVQKLQGHTDVVLN 291
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000006156 (supercontig:LSalAtl2s:LSalAtl2s336:420428:421924:-1 gene:EMLSAG00000006156 transcript:EMLSAT00000006156 description:"augustus_masked-LSalAtl2s336-processed-gene-4.9") HSP 1 Score: 101.679 bits (252), Expect = 5.492e-24 Identity = 69/241 (28.63%), Postives = 114/241 (47.30%), Query Frame = 0 Query: 118 DGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSV----HPARRG----EPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSIL--SGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSD 344 + QY+ TGS ++ + I+ L+GH++ + S+ H G +P + S S D S+++W+ + + G V+ ++ + + + DN ++WDL Q +L GH+ + ++ DGS LT +D+ RIWD+R +C + GH K ++ WS DG + GSSD IWD RKI Y +P H V++V F E +L+AS D Sbjct: 215 NSQYLLTGSWSGLCKLWSVPDCKEIRTLRGHSSNIGSIVFNPHATLEGHSNKDPCMASCSQDGSVKLWNLESDEPIADIEGHDSRVSRCAYHPSGRFLATCVYDNSWRLWDL---EQLQEVLHQEGHSKPVHCIAFQNDGSLALTGGLDSFGRIWDLR----TGQCIMFLEGHL----KGIIGVDWSRDGYHCATGSSDNACKIWDLRKRKIEYTIPAHTNVVSNVVFD--EDYLLTASYD 442 HSP 2 Score: 95.1301 bits (235), Expect = 8.746e-22 Identity = 69/216 (31.94%), Postives = 107/216 (49.54%), Query Frame = 0 Query: 49 NLES--PIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTL----NGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIW 258 NLES PI + G H + +HP G+ LA+ +D + LW++ E H H+ + + F DG TG D I+D T Q I L+GH + V +R G +GS D + ++WD RKR T+ N V++V F++ D +++A D K+W RK QP + L GH + ++SPD SY+ T + D + ++W Sbjct: 283 NLESDEPIADIEG-HDSRVSRCAYHPSGRFLATCVYDNSWRLWDLEQLQEVLH--QEGHSKPVHCIAFQ-NDGSLALTGGLDSFGRIWDLRTGQCIMFLEGHLKGIIGVDWSRDGYH-CATGSSDNACKIWDLRKRKIEYTIPAHTNVVSNVVFDE--DYLLTASYDGTAKLW-ARKTWQPLASLKGHDLRLMDCAISPDRSYIATCSYDRTFKLW 490 HSP 3 Score: 68.9366 bits (167), Expect = 4.371e-13 Identity = 68/284 (23.94%), Postives = 119/284 (41.90%), Query Frame = 0 Query: 70 FHPDGQILASAGFDRTICLWNVYGECENYHVI--NSVHAGAILDLHFAYEDGQ-----YMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVN--SVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRP------------------FVQNDRCTKIITGHQHNFEKN--------------LLKCCWSPDGAMVSAGSSDRFVYIW 308 F P+ Q L + + LW+V +C+ + +S + G+I+ A +G M + S D +V +++ + + I ++GH + V+ + HP+ R + + D S R+WD + V G V + F + ++ G+D+ +IWDLR Q L GH I G+ S DG + T + DN+ +IWD+R F ++ T G + + L+ C SPD + ++ S DR +W Sbjct: 212 FSPNSQYLLTGSWSGLCKLWSV-PDCKEIRTLRGHSSNIGSIVFNPHATLEGHSNKDPCMASCSQDGSVKLWNLESDEPIADIEGHDSRVSRCAYHPSGR---FLATCVYDNSWRLWDLEQLQEVLHQEGHSKPVHCIAFQNDGSLALTGGLDSFGRIWDLR-TGQCIMFLEGHLKGIIGVDWSRDGYHCATGSSDNACKIWDLRKRKIEYTIPAHTNVVSNVVFDEDYLLTASYDGTAKLWARKTWQPLASLKGHDLRLMDCAISPDRSYIATCSYDRTFKLW 490
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000011537 (supercontig:LSalAtl2s:LSalAtl2s799:381305:384324:1 gene:EMLSAG00000011537 transcript:EMLSAT00000011537 description:"maker-LSalAtl2s799-snap-gene-3.77") HSP 1 Score: 100.138 bits (248), Expect = 1.577e-23 Identity = 71/267 (26.59%), Postives = 123/267 (46.07%), Query Frame = 0 Query: 59 GSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNGVTSVTF------------NDTADQVI-SAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITG---HQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWD 309 G H+G IF K++ G + SAG DRT +W+ + N+ + H+ LD+ ++ + + STDK + + + IK GHTN VN++ +G+ + S SDD +++VW K + V L + + N AD V+ SA D+ V++WD+ + L H + + ++ SPDG ++ + + D + IW +TG H + + + CW+ G V A +SD V++ D Sbjct: 230 GQHKGPIFALKWNKSGNYILSAGVDRTTIIWD--SQTGNHKQQFAFHSAPALDVD--WQTDESFASCSTDKCIHVCKLGVEKPIKSFYGHTNEVNAIKWDPQGK-FLASCSDDMTLKVWCMDKESHVHDLQAHSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWDVER-GSCLHXLXRHKEPVYSVAFSPDGKFLASGSFDKCVHIWST------------VTGKLVHSYKGTGGIFEVCWNSRGDKVGASASDGTVFVLD 478 HSP 2 Score: 58.9214 bits (141), Expect = 7.959e-10 Identity = 76/368 (20.65%), Postives = 149/368 (40.49%), Query Frame = 0 Query: 48 SNLESPI---MLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVI-NSVHAGA--------ILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTL---------------------------------------------NGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLS--------PDGSYVLTNA-MDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYL 349 +N+E P +L G H E+F ++P +LAS D T +W++ + ++ + +H G + L + G + TGS D I+ T T + K L H + ++ + G ++ +G D +I +WD + N Q N V ++ ++ + S D +K+W + K + L H+ I + S P+ VL +A D+++R+WD V+ C + H+ + + +SPDG +++GS D+ V+IW T + K+++ G G + +V ++ + +++SD +++ Sbjct: 123 TNIEIPAEKASVLKG-HDSEVFICAWNPMQDLLASGSGDSTARIWHMEDSQQREIILKHCIHRGGQEVPSNKDVTSLDWN-SSGSLLATGSYDGFARIWST-TGKLEKTLGQHKGPIFALKWNKSGNYILSAGVDRTTI-IWDSQTGNHKQQFAFHSAPALDVDWQTDESFASCSTDKCIHVCKLGVEKPIKSFYGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKESHVHD-LQAHSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWD----VERGSCLHXLXRHK----EPVYSVAFSPDGKFLASGSFDKCVHIWSTVTGKLVHSYKG-TGGIFEVCWNSRGDKVGASASDGTVFV 476 HSP 3 Score: 50.8322 bits (120), Expect = 2.853e-7 Identity = 38/141 (26.95%), Postives = 66/141 (46.81%), Query Frame = 0 Query: 208 IDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIIT---GHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDR 345 ID ++I P + +S+L GH + + +P + + + D++ RIW + Q + K G + K++ W+ G++++ GS D F IW TT K+ L H G + + ++K ILSA DR Sbjct: 121 IDTNIEI-----PAEKASVLKGHDSEVFICAWNPMQDLLASGSGDSTARIWHMEDSQQREIILKHCIHRGGQEVPSNKDVTSLDWNSSGSLLATGSYDGFARIWSTTG-KLEKTLGQHKGPIFALKWNKSGNYILSAGVDR 255
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000009105 (supercontig:LSalAtl2s:LSalAtl2s573:267932:269786:1 gene:EMLSAG00000009105 transcript:EMLSAT00000009105 description:"maker-LSalAtl2s573-augustus-gene-2.14") HSP 1 Score: 95.1301 bits (235), Expect = 3.502e-22 Identity = 71/264 (26.89%), Postives = 128/264 (48.48%), Query Frame = 0 Query: 59 GSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNGVTSVTF------------NDTADQV-ISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWD 309 G H+G IF K++ G + SA DRT +W+ + N++ + H+ ILD+ ++ + + S DK + + + IK GHTN V+S+ +G+ + SGS+D +++VW K + V L + + N AD V +SA D+ V++WD+ + + + L+ H +T++ ++ SPDG ++ + + D + IW N + + G +E CW+ G V A +SD V++ D Sbjct: 112 GKHKGPIFGVKWNKSGNYILSASEDRTTIIWD--SQTGNHNQQFAFHSAPILDVD--WQTDESFASCSKDKCIHVCKLGVEKPIKSFYGHTNEVHSIKWDPQGK-FLASGSNDTTLKVWCMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHT-LTRHQETVSSVAFSPDGKFLASGSYDKFVYIWS----TVNGKLVRCYKGTGAIYE-----VCWNYRGDKVGACASDGNVFVLD 360 HSP 2 Score: 52.373 bits (124), Expect = 6.534e-8 Identity = 40/145 (27.59%), Postives = 66/145 (45.52%), Query Frame = 0 Query: 208 IDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCC-------WSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDR 345 ID ++I P + +++L GH + + +P +++ + D++ RIW + Q D II H E + C W+ G++++ G D IW TT K+ L H G + V ++K ILSAS DR Sbjct: 3 IDTNIEI-----PAEKANVLKGHNEEAFKCAWNPMQDLLVSGSADSTARIWHMEDSQQWD----IILKHGKGREDCYIPCTTDVTSLDWNSSGSLLATGFYDGIARIWSTTG-KLEKTLGKHKGPIFGVKWNKSGNYILSASEDR 137 HSP 3 Score: 50.8322 bits (120), Expect = 2.525e-7 Identity = 59/284 (20.77%), Postives = 107/284 (37.68%), Query Frame = 0 Query: 134 FDTNT---AQRIKRLKGHTN--YVNSVHPARRGEPLIVSGSDDCSIRVWDQ---------------RKRNAVQTLNGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQN--------------------------DRCTKII---------TGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEP---------IILSASSDRQIYLGEFE 353 DTN A++ LKGH + + +P + L+VSGS D + R+W R+ + VTS+ +N + + + D +IW + L H I G+ + G+Y+L+ + D + IWD + N D+C + + + H E + +K W P G +++GS+D + +W ++ L H A+ + + P +++SAS D + L + E Sbjct: 3 IDTNIEIPAEKANVLKGHNEEAFKCAWNPM---QDLLVSGSADSTARIWHMEDSQQWDIILKHGKGREDCYIPCTTDVTSLDWNSSGSLLATGFYDGIARIW--STTGKLEKTLGKHKGPIFGVKWNKSGNYILSASEDRTTIIWDSQTGNHNQQFAFHSAPILDVDWQTDESFASCSKDKCIHVCKLGVEKPIKSFYGHTNEVHSIK--WDPQGKFLASGSNDTTLKVWCMDKESHVHDLKAHSKAIYTIKWSCTGPGTNNPNADLVLVSASYDSTVRLWDVE 279
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000000903 (supercontig:LSalAtl2s:LSalAtl2s1157:9447:26512:1 gene:EMLSAG00000000903 transcript:EMLSAT00000000903 description:"maker-LSalAtl2s1157-augustus-gene-0.18") HSP 1 Score: 89.7373 bits (221), Expect = 7.585e-20 Identity = 64/222 (28.83%), Postives = 107/222 (48.20%), Query Frame = 0 Query: 121 YMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNS--VHPARRGEPLIVSGSDDCSIRVWDQRKRNAV-QTLNG----VTSVTFNDTADQVI-SAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSL--SPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFE---------------KNLL--KCCWSPDGAMVSAGSSDRFVYIWDTTSRKI 315 ++ TGS D + +F+ NT +R+ L+ H++Y+ S VHP+ EPL++S SDD I++W+ K A Q G + V N + SA +D +K+W L + P+ L GH + + + D Y+++ A D S++IWD QN C + + GH N K+ K C+ P+ ++ GS D V IW ++ ++ Sbjct: 71 WVVTGSDDMKLNVFNYNTLERVSCLEAHSDYLRSLAVHPS---EPLVLSSSDDMLIKLWNWDKAWACEQVFEGHTHYIMQVVINPKDNNXFASASLDRTIKVWHL-GASCPNFTLEGHDKGVNCLDYYHAGDKPYLISGADDRSVKIWDY----QNKNCVQTLEGHAQNIASGKADTTCFLFSFIPKHFFHSKVCFHPELPIILTGSEDGTVRIWHASTYRL 284 HSP 2 Score: 58.5362 bits (140), Expect = 1.334e-9 Identity = 49/202 (24.26%), Postives = 86/202 (42.57%), Query Frame = 0 Query: 60 SHQGEIFTAKFHPDGQILASAGFDRTICLWN--VYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGE-PLIVSGSDDCSIRVWDQRKRNAVQTLNGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIW 258 +H + + HP ++ S+ D I LWN CE + H I+ + +D + S D+T+ ++ + L+GH VN + G+ P ++SG+DD S+++WD + +N VQTL G A + S D ++ + S + H P+ +LT + D ++RIW Sbjct: 97 AHSDYLRSLAVHPSEPLVLSSSDDMLIKLWNWDKAWACEQ---VFEGHTHYIMQVVINPKDNNXFASASLDRTIKVWHLGASCPNFTLEGHDKGVNCLDYYHAGDKPYLISGADDRSVKIWDYQNKNCVQTLEG--------HAQNIASGKADTTCFLFSFIPKHFFHSKVCFH----------PELPIILTGSEDGTVRIW 277 HSP 3 Score: 53.9138 bits (128), Expect = 3.545e-8 Identity = 40/153 (26.14%), Postives = 64/153 (41.83%), Query Frame = 0 Query: 61 HQGEIFTAKFHP-DGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNS-----------------------VHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLN 189 H I +P D ASA DRTI +W++ C N+ + LD + A D Y+ +G+ D++V I+D ++ L+GH + S HP P+I++GS+D ++R+W TLN Sbjct: 141 HTHYIMQVVINPKDNNXFASASLDRTIKVWHLGASCPNFTLEGHDKGVNCLDYYHA-GDKPYLISGADDRSVKIWDYQNKNCVQTLEGHAQNIASGKADTTCFLFSFIPKHFFHSKVCFHPEL---PIILTGSEDGTVRIWHASTYRLENTLN 289
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000001730 (supercontig:LSalAtl2s:LSalAtl2s129:321159:324031:-1 gene:EMLSAG00000001730 transcript:EMLSAT00000001730 description:"maker-LSalAtl2s129-snap-gene-3.7") HSP 1 Score: 88.5817 bits (218), Expect = 1.607e-19 Identity = 84/313 (26.84%), Postives = 145/313 (46.33%), Query Frame = 0 Query: 53 PIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVY-GECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPG---HLGAVNDVDFHKVEPIILSASSDRQIYL-----GEF 352 P +L G H + T + +I+ S D T+ +W+ G+C V H G + + +GSTD+++ +++ + + L GHT+ V +H E +VSGS D ++R+WD + L G V V ++ V+S D VK+W+ + + LSGHT+ + SL DG +V++ ++D S+R+WD V+ C + GHQ L+ ++ +G++D V +WD T+ + L L G H AV + F+ ++++S D + L GEF Sbjct: 316 PPKVLKG-HDDHVITCLQFSNNRIV-SGSDDNTLKVWSATTGKCLRTLV---GHTGGVWSXQMR---DNIIVSGSTDRSLKVWNADAGTCVHTLYGHTSTVRCMHLH---ENQVVSGSRDSTLRIWDIETGECLHILAGHLAAVRCVQYD--GRLVVSGAYDYMVKVWNPER-EECLHTLSGHTNRV--YSLQFDGIHVVSGSLDTSIRVWD----VETGACKHALMGHQSLTSGMELR------NNILVSGNADSTVKVWDITNGQCLQTLSGHNKHQSAVTCLQFNS--KFVITSSDDGTVKLWDVKTGEF 600 HSP 2 Score: 78.1814 bits (191), Expect = 4.701e-16 Identity = 62/215 (28.84%), Postives = 99/215 (46.05%), Query Frame = 0 Query: 143 KRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTL----NGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 K LKGH ++V + + IVSGSDD +++VW ++TL GV S D ++S D +K+W+ L GHT T+ M L + V++ + D++LRIWD+ + C I+ GH C DG +V +G+ D V +W+ + L+ L GH V + F + ++S S D I + + E Sbjct: 318 KVLKGHDDHV--ITCLQFSNNRIVSGSDDNTLKVWSATTGKCLRTLVGHTGGVWSXQMRDNI--IVSGSTDRSLKVWNA-DAGTCVHTLYGHTSTVRCMHLHEN--QVVSGSRDSTLRIWDI----ETGECLHILAGHLAAVR------CVQYDGRLVVSGAYDYMVKVWNPEREECLHTLSGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVE 513
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000003976 (supercontig:LSalAtl2s:LSalAtl2s213:19395:20797:-1 gene:EMLSAG00000003976 transcript:EMLSAT00000003976 description:"augustus_masked-LSalAtl2s213-processed-gene-0.0") HSP 1 Score: 86.6557 bits (213), Expect = 3.190e-19 Identity = 63/242 (26.03%), Postives = 112/242 (46.28%), Query Frame = 0 Query: 133 IFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKC-CWSPD----------------------GAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQI 347 ++D T + LKGHT+ V + G+ L+VS S D SI++WD + ++TL G V+SV F D ++SA D +K+W+ +GH + + + + DGS + + + D S+R+W C + H H +++C W+P+ G +++GS D+ + +WD ++ ++L+ GH V + +H +LSAS D+ I Sbjct: 106 LWDFETGDYERTLKGHTDCVQDIGFDSPGK-LLVSCSADMSIKIWDFQTYECLKTLQGHDHNVSSVCFTPNGDYILSASRDKTIKMWET-ATGYCVRTYTGHREWVRNVRVLHDGSLLASCSNDQSVRVWS----TSTKDCKDELRDHDH-----VVECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYVGHDNWVRGLVWHPGGKYLLSASDDKTI 336 HSP 2 Score: 84.7297 bits (208), Expect = 1.602e-18 Identity = 70/284 (24.65%), Postives = 128/284 (45.07%), Query Frame = 0 Query: 70 FHPDGQILASAGFDRTICLWNVYGECENYHVINSV--HAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGE 351 F G++L S D +I +W+ + Y + ++ H + + F +G Y+ + S DKT+ +++T T ++ GH +V +V G L+ S S+D S+RVW ++ L +D + IS ++ V P + LSG D + + G ++ + + D ++++WDV + GH N+ + L+ W P G + + S D+ + +WD ++ +L H +DFHK P I+S S D+ I + E Sbjct: 130 FDSPGKLLVSCSADMSIKIWDF----QTYECLKTLQGHDHNVSSVCFT-PNGDYILSASRDKTIKMWETATGYCVRTYTGHREWVRNVRVLHDGS-LLASCSNDQSVRVWSTSTKDCKDELRD------HDHVVECISWAPESAVG------PINEALTLSGE-DGVKKRT----GPFLASGSRDKTIKVWDV----STGQVLFTYVGHD-NWVRGLV---WHPGGKYLLSASDDKTIRVWDIAHKRCHKRLDSHSHFCTSIDFHKTYPYIVSGSVDQTIKIWE 382 HSP 3 Score: 69.707 bits (169), Expect = 1.511e-13 Identity = 52/183 (28.42%), Postives = 91/183 (49.73%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNV-YGECENY-----HVINSVH------AGAILD-LHFAYEDG------QYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSV--HPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLR 218 H+ + + DG +LAS D+++ +W+ +C++ HV+ + G I + L + EDG ++ +GS DKT+ ++D +T Q + GH N+V + HP G ++S SDD +IRVWD + + L+ TS+ F+ T ++S +D +KIW+ R Sbjct: 205 HREWVRNVRVLHDGSLLASCSNDQSVRVWSTSTKDCKDELRDHDHVVECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYVGHDNWVRGLVWHP---GGKYLLSASDDKTIRVWDIAHKRCHKRLDSHSHFCTSIDFHKTYPYIVSGSVDQTIKIWECR 384 HSP 4 Score: 65.855 bits (159), Expect = 3.464e-12 Identity = 51/227 (22.47%), Postives = 96/227 (42.29%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWN-VYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPA---------------------RRGEPLIVSGSDDCSIRVWDQRKRNAVQTL----NGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVR 261 H + + F P+G + SA D+TI +W G C + + + LH DG + + S D++V ++ T+T L+ H + V + A +R P + SGS D +I+VWD + T N V + ++ ++SA D +++WD+ + L H+ T + Y+++ ++D +++IW+ R Sbjct: 163 HDHNVSSVCFTPNGDYILSASRDKTIKMWETATGYCVRTYTGHREWVRNVRVLH----DGSLLASCSNDQSVRVWSTSTKDCKDELRDHDHVVECISWAPESAVGPINEALTLSGEDGVKKRTGPFLASGSRDKTIKVWDVSTGQVLFTYVGHDNWVRGLVWHPGGKYLLSASDDKTIRVWDIAH-KRCHKRLDSHSHFCTSIDFHKTYPYIVSGSVDQTIKIWECR 384
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000003862 (supercontig:LSalAtl2s:LSalAtl2s209:625539:633615:-1 gene:EMLSAG00000003862 transcript:EMLSAT00000003862 description:"maker-LSalAtl2s209-snap-gene-5.15") HSP 1 Score: 86.2705 bits (212), Expect = 8.935e-19 Identity = 66/239 (27.62%), Postives = 108/239 (45.19%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSV--HPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFE---KNLLKCCWS 290 H G ++ F PD +L S D TI LW Y H A+ + F+ + G Y + DKTV ++ T ++ GH + V+ + HP I SGS D S+RVWD N V+ + G V+++ F+ + S G D++V WD+ + + LS H+ T+T ++ S DG+ + ++ D L +W + + + H + KNLL +S Sbjct: 400 HSGPVYGISFSPDKSMLLSCSEDGTIRLWICY----------RGHMYAVWHVKFSPQ-GYYFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCN---YIASGSSDRSVRVWDCVSGNCVRLMTGHKTAVSTLAFSPDGRFLASGGRDSRVLFWDIAHGHLLAD-LSNHSQTVTALAFSRDGNILAXSSTDFXLAMWXFQKLINESSLEDVNVAHNPDVRTDSKNLLVTSYS 623 HSP 2 Score: 73.559 bits (179), Expect = 1.752e-14 Identity = 54/223 (24.22%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 133 IFDTNTAQRIKRLKGHTN--YVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 + + N+ + L GH+ Y S P + +++S S+D +IR+W + + + V V F+ SAG D V +W + + I +GH + ++ P+ +Y+ + + D S+R+WD + C +++TGH+ + +SPDG +++G D V WD +L L H V + F + I+ +S+D + + F+ Sbjct: 385 MMEDNSGVVSRTLYGHSGPVYGISFSPDK---SMLLSCSEDGTIRLWICYRGH----MYAVWHVKFSPQGYYFASAGHDKTVMLWSTEQ-HHSLRIFAGHFSDVDCIAFHPNCNYIASGSSDRSVRVWDC----VSGNCVRLMTGHK----TAVSTLAFSPDGRFLASGGRDSRVLFWDIAHGHLLADLSNHSQTVTALAFSRDGNILAXSSTDFXLAMWXFQ 591 HSP 3 Score: 56.225 bits (134), Expect = 5.958e-9 Identity = 46/186 (24.73%), Postives = 82/186 (44.09%), Query Frame = 0 Query: 164 LIVSGSDDCSIRVWD--QRKRNAVQTLNGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQI 347 ++ +G D +I+VW K +++ + + + N AD V+ +++ + S L GH+ + G+S SPD S +L+ + D ++R+W C + GH + + +SP G ++ D+ V +W T L GH V+ + FH I S SSDR + Sbjct: 342 ILGAGFSDAAIKVWSLLPSKLKVLKSADELGDI--NRDADDVLHRMMEDNSGV--------VSRTLYGHSGPVYGISFSPDKSMLLSCSEDGTIRLW---------ICYR---GHMYA----VWHVKFSPQGYYFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHPNCNYIASGSSDRSV 501
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Match: EMLSAG00000005428 (supercontig:LSalAtl2s:LSalAtl2s292:433774:436791:-1 gene:EMLSAG00000005428 transcript:EMLSAT00000005428 description:"maker-LSalAtl2s292-augustus-gene-4.28") HSP 1 Score: 84.7297 bits (208), Expect = 4.105e-18 Identity = 77/305 (25.25%), Postives = 128/305 (41.97%), Query Frame = 0 Query: 23 KAKTDEALAVVDDQTQLQAAGPPRSSNLESPIMLLSGS------HQGEIFTAKFHPDGQILASAGFDRTICLWNV-YGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQT-LNGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDT-------ITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTS 312 + +E + ++ +Q G S + + + L + S H GE+ ++P L + G DR I WN+ G EN ++ + G+I+ L F G + S D I+ + + L GH+ V S I SGS D +I+VWD + R + T G T +IS D +++ +D R SS S + IT + LS +G Y+L + +N + I D+R C ++G + + +SPD V+ G+SD ++IW S Sbjct: 197 REAAEEKTVHLPNEKNIQTVGQANLSTICATVRLPTKSYLKIIAHDGEVNCVAWNPHTSDLYTGGSDRKIKYWNIAKGVAENRGQLSGCN-GSIMSLDFD-TSGSLILGASGDFASRIWSVDGCRLRHTLTGHSGKVMSAKFLLDSTKFI-SGSQDRTIKVWDLQSRACISTKFAGSTCNDLVTNETMIISGHFDKKIRFYDCRNIGGSSSFXSDTHQSEIIVGGKITSLDLSKNGQYLLASTRENKIEITDLRNMKTTLNC---LSGSGFQIGCDWARATFSPDSEYVACGTSDGSIFIWKYNS 495
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|67462046|sp|Q6PE01.1|SNR40_MOUSE (RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein; Short=U5 snRNP 40 kDa protein; AltName: Full=WD repeat-containing protein 57) HSP 1 Score: 421.394 bits (1082), Expect = 9.191e-147 Identity = 188/318 (59.12%), Postives = 257/318 (80.82%), Query Frame = 0 Query: 39 LQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 L AGPPR S+L++PIMLLSG H+GE++ KFHP+G LASAGFDR I LWNVYG+C+NY + H+GA+++LH+ DG +++ STDKTV ++D+ T +R+KRLKGHT++VNS +PARRG L+ +GSDD ++++WD RK+ AVQT V +VTFNDT+DQ+IS GIDN +K+WDLR+ N+ + + GH D++TG+SLS +GSY+L+NAMDN++R+WDVRPF +RC KI G+ HNFEKNLL+C WSPDG+ ++AGS+DRFVY+WDTTSR++LYKLPGH G++N+V FH EPIILSASSD+++Y+GE + Sbjct: 45 LLQAGPPRCSSLQAPIMLLSG-HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ-NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|67462075|sp|Q96DI7.1|SNR40_HUMAN (RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein; Short=U5 snRNP 40 kDa protein; Short=U5-40K; AltName: Full=38 kDa-splicing factor; AltName: Full=Prp8-binding protein; Short=hPRP8BP; AltName: Full=U5 snRNP-specific 40 kDa protein; AltName: Full=WD repeat-containing protein 57) HSP 1 Score: 421.394 bits (1082), Expect = 1.129e-146 Identity = 187/318 (58.81%), Postives = 257/318 (80.82%), Query Frame = 0 Query: 39 LQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 L AGPPR S+L++PIMLLSG H+GE++ KFHP+G LASAGFDR I LWNVYG+C+NY + H+GA+++LH+ DG +++ STDKTV ++D+ T +R+KRLKGHT++VNS +PARRG L+ +GSDD ++++WD RK+ A+QT V +VTFNDT+DQ+IS GIDN +K+WDLR+ N+ + + GH D++TG+SLS +GSY+L+NAMDN++R+WDVRPF +RC KI G+ HNFEKNLL+C WSPDG+ ++AGS+DRFVY+WDTTSR+ILYKLPGH G++N+V FH EPII+SASSD+++Y+GE + Sbjct: 44 LLQAGPPRCSSLQAPIMLLSG-HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ-NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|110288017|sp|Q2HJH6.1|SNR40_BOVIN (RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein; Short=U5 snRNP 40 kDa protein; AltName: Full=WD repeat-containing protein 57) HSP 1 Score: 421.009 bits (1081), Expect = 1.470e-146 Identity = 187/318 (58.81%), Postives = 257/318 (80.82%), Query Frame = 0 Query: 39 LQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 L AGPPR S+L++PIMLLSG H+GE++ KFHP+G LASAGFDR I LWNVYG+C+NY + H+GA+++LH+ DG +++ STDKTV ++D+ T +R+KRLKGHT++VNS +PARRG L+ +GSDD ++++WD RK+ A+QT V +VTFNDT+DQ+IS GIDN +K+WDLR+ N+ + + GH D++TG+SLS +GSY+L+NAMDN++R+WDVRPF +RC +I G+ HNFEKNLL+C WSPDG+ ++AGS+DRFVY+WDTTSR+ILYKLPGH G++N+V FH EPIILSASSD+++Y+GE + Sbjct: 45 LLQAGPPRCSSLQAPIMLLSG-HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKG-HSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ-NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|67462026|sp|Q5RF51.1|SNR40_PONAB (RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein; Short=U5 snRNP 40 kDa protein; AltName: Full=WD repeat-containing protein 57) HSP 1 Score: 410.994 bits (1055), Expect = 1.273e-142 Identity = 184/318 (57.86%), Postives = 254/318 (79.87%), Query Frame = 0 Query: 39 LQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 L AGPPR S+L++PIMLLSG H+GE++ KFHP+G LASAGFDR I LWNVYG+C NY + ++GA+++LH+ DG +++ STDKTV ++D+ T +R+KRLKGHT++VNS +PARRG L+ +GSDD ++++WD RK+ A+QT V +VTFNDT+DQ+IS GIDN +K+WDLR+ N+ + + GH D++TG+SLS +GSY+L+NAMDN++R+WDVRPF +RC KI G+ HNFEKNLL+C WSPDG+ ++AGS+DR V +WDTTSR+ILYKLPGH G++N+V FH EPII+SASSD+++Y+GE + Sbjct: 44 LLQAGPPRCSSLQAPIMLLSG-HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCGNYATLKG-YSGAVMELHYN-TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ-NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|74997356|sp|Q55AR8.1|SNR40_DICDI (RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein; Short=U5 snRNP 40 kDa protein; AltName: Full=WD repeat-containing protein 57 homolog) HSP 1 Score: 330.872 bits (847), Expect = 4.195e-111 Identity = 162/315 (51.43%), Postives = 215/315 (68.25%), Query Frame = 0 Query: 43 GPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFEP 354 G R+S LE PIM L G H+GEI++ KF+ G LAS G D+ I LWNVYGEC NY V+ H G IL+LH++ D +YT TDK++G++D+N + IKR++ H+ VNS PARRG PL+ SGSDD S R++D R + + VTSV F+D +DQ+I+ GIDN +++WD+R P L+ H DTIT S+S DG+Y+L+N+MDNS +IWD+RP+ +R K G Q+NFEKNL+K WS DG + GSSDR VYIWDT ++++ Y LPGH G VN+V FH EPII S SSD+ IYLGE +P Sbjct: 44 GTERTSKLEHPIMQLIG-HKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKG-HKGTILELHWS-TDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEIKP 355
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|17368094|sp|O94620.1|CWF17_SCHPO (RecName: Full=Pre-mRNA-splicing factor cwf17; AltName: Full=Complexed with cdc5 protein 17) HSP 1 Score: 257.299 bits (656), Expect = 1.852e-82 Identity = 135/310 (43.55%), Postives = 190/310 (61.29%), Query Frame = 0 Query: 46 RSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEF 352 R+S+L P + + G H E+ A+F P G AS G DR I LWNV+G+ +NY V+N GAI DL ++ D + +Y S+D + +D + Q+I++ KGH VN++ + G L+ S SDDC+++VWD R ++ ++T+ +T+V QV GID +KIWDLR N S +L GH D IT +++S DGS +L+N+MDN++RI+DV+PF R +I G H E NLL WS + V AGSSD+ VY+W T + Y LPGH G+VN VDFH + IILS SSDR I+LGE Sbjct: 35 RTSDLNVPNLQMFG-HTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGC-KGAITDLQWS-RDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRN-NHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVWSATG-DLRYVLPGHEGSVNHVDFHPHQDIILSCSSDRTIFLGEL 339
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|3023956|sp|Q00808.1|HETE1_PODAS (RecName: Full=Vegetative incompatibility protein HET-E-1) HSP 1 Score: 153.295 bits (386), Expect = 7.924e-40 Identity = 101/294 (34.35%), Postives = 149/294 (50.68%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVY-GECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYL 349 H + + F PDGQ +AS D+TI +W+ G C H G++ + F+ DGQ + +GS DKT+ I+DT + + L+GH +V SV + G+ + SGSDD +I++WD QTL G V SV F+ +V S ID +KIWD + L GH + ++ SPDG V + ++D +++IWD + CT+ + GH + +SPDG V++GSSD+ + IWDT S L GH G V V F + S SSD I + Sbjct: 966 HGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQ---TLEGHGGSVWSVAFS-PDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQR-VASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDA-ASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDA----ASGTCTQTLEGHGGWVQS----VAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKI 1245 HSP 2 Score: 145.976 bits (367), Expect = 2.909e-37 Identity = 100/294 (34.01%), Postives = 147/294 (50.00%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVY-GECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYL 349 H G + + F PDGQ +AS D TI +W+ G C H ++L + F+ DGQ + +GS DKT+ I+DT + + L+GH V SV + G+ + SGSDD +I++WD QTL G V SV F+ +V S D+ +KIWD + L GH D++ ++ SPDG V + ++D +++IWD + CT+ + GH +SPDG V++GS D + IWD S L GH G V V F + S SSD+ I + Sbjct: 924 HGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQ---TLEGHGSSVLSVAFS-PDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQR-VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVS-GTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWD----AASGTCTQTLEGHGGWVH----SVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKI 1203 HSP 3 Score: 129.798 bits (325), Expect = 9.328e-32 Identity = 87/257 (33.85%), Postives = 131/257 (50.97%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVY-GECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTS 312 H G +++ F PDGQ +AS D+TI +W+ G C H G + + F+ DGQ + +GS D T+ I+D + + L+GH + V SV + G+ + SGS D +I++WD QTL G V SV F+ +V S ID +KIWD + L GH + ++ SPDG V + + D +++IWD + CT+ + GH + +SPDG V++GSSD + IWDT S Sbjct: 1008 HGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQ---TLEGHGGWVQSVVFS-PDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR-VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDA-ASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDT----ASGTCTQTLEGHGGWVQS----VAFSPDGQRVASGSSDNTIKIWDTAS 1250 HSP 4 Score: 127.872 bits (320), Expect = 4.100e-31 Identity = 90/293 (30.72%), Postives = 139/293 (47.44%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYL 349 H + + F DGQ +AS D+TI +W+ + H G++ + F+ D + + +GS DKT+ I+D + + L+GH V SV + G+ + SGSDD +I++WD QTL G V SV F+ +V S D +KIWD + L GH ++ ++ SPDG V + + D +++IWD + CT+ + GH + + SPDG V++GS D + IWD S L GH +V V F + S S D I + Sbjct: 840 HGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEG--HGGSVWSVAFS-PDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQR-VASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDT-ASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWD----TASGTCTQTLEGHGGWVQSVVF----SPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKI 1119 HSP 5 Score: 89.3521 bits (220), Expect = 4.362e-18 Identity = 63/194 (32.47%), Postives = 94/194 (48.45%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVY-GECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTN 249 H +++ F PDGQ +AS D TI +W+ G C H G + + F+ DGQ + +GS D T+ I+D + + L+GH +V SV + G+ + SGS D +I++WD QTL G V SV F+ +V S DN +KIWD ++ G T T +S +Y+ TN Sbjct: 1092 HGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQ---TLEGHGGWVHSVAFS-PDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR-VASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGTCTQTLNVGSTATC--LSFDYTNAYINTN 1278 HSP 6 Score: 75.485 bits (184), Expect = 1.575e-13 Identity = 57/195 (29.23%), Postives = 87/195 (44.62%), Query Frame = 0 Query: 159 RRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG----VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYL 349 ++ EP +S +I V + QTL G V SV F+ +V S D +KIWD + L GH ++ ++ SPD V + + D +++IWD + CT+ + GH + +SPDG V++GS D + IWD S L GH +V V F + S S D+ I + Sbjct: 813 KKEEPGWIS-----TISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDT-ASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDA----ASGTCTQTLEGHGGRVQS----VAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKI 993
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|8928446|sp|Q9V3J8.1|WDS_DROME (RecName: Full=Protein will die slowly) HSP 1 Score: 147.132 bits (370), Expect = 8.344e-40 Identity = 95/296 (32.09%), Postives = 156/296 (52.70%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTL----NGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWS-PDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSAS--SDRQIYL 349 H + KF P+G+ LAS+ D+ I +W Y + S H I D+ ++ D + + +GS DKT+ +++ +T + +K LKGH+NYV + + LIVSGS D S+R+WD R ++TL + V++V FN ++S+ D +IWD +++ ++ + SP+G Y+L +DN+L++WD +C K TGH++ EK + +S G + +GS D VYIW+ S++++ KL GH V H E II SA+ +D+ I L Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWS-SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD----YSKGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKL 356 HSP 2 Score: 60.077 bits (144), Expect = 7.718e-9 Identity = 35/132 (26.52%), Postives = 66/132 (50.00%), Query Frame = 0 Query: 219 KPNQPSSI-LSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYL 349 KPN L+GHT ++ + SP+G ++ +++ D ++IW + + K I+GH+ WS D ++ +GS D+ + +W+ ++ K L L GH V +F+ +I+S S D + + Sbjct: 59 KPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAY----DGKFEKTISGHKLGIS----DVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 182 HSP 3 Score: 54.299 bits (129), Expect = 4.713e-7 Identity = 38/165 (23.03%), Postives = 77/165 (46.67%), Query Frame = 0 Query: 60 SHQGEIFTAKFHPDGQILASAGFDRTICLWNVY-GECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTN--YVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNGVTSVTF----NDTADQVISAGIDNQ--VKIW 215 +H + F+ DG ++ S+ +D +W+ G+C + + + + +G+Y+ + D T+ ++D + + +K GH N Y + + G IVSGS+D + +W+ + + VQ L G T + T + + SA ++N +K+W Sbjct: 196 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS---PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|48429182|sp|P61964.1|WDR5_HUMAN (RecName: Full=WD repeat-containing protein 5; AltName: Full=BMP2-induced 3-kb gene protein >gi|48429183|sp|P61965.1|WDR5_MOUSE RecName: Full=WD repeat-containing protein 5; AltName: Full=BMP2-induced 3-kb gene protein; AltName: Full=WD repeat-containing protein BIG-3 >gi|123781540|sp|Q498M4.1|WDR5_RAT RecName: Full=WD repeat-containing protein 5) HSP 1 Score: 145.591 bits (366), Expect = 1.938e-39 Identity = 94/296 (31.76%), Postives = 155/296 (52.36%), Query Frame = 0 Query: 61 HQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTL----NGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWS-PDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSAS--SDRQIYL 349 H + + KF P+G+ LAS+ D+ I +W Y + S H I D+ ++ D + + S DKT+ I+D ++ + +K LKGH+NYV + + LIVSGS D S+R+WD + ++TL + V++V FN ++S+ D +IWD +++ ++ + SP+G Y+L +DN+L++WD +C K TGH++ EK + +S G + +GS D VYIW+ +++I+ KL GH V H E II SA+ +D+ I L Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD----YSKGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
BLAST of wd repeat-containing protein 57 vs. SwissProt
Match: gi|122136017|sp|Q2KIG2.1|WDR5_BOVIN (RecName: Full=WD repeat-containing protein 5) HSP 1 Score: 145.591 bits (366), Expect = 1.958e-39 Identity = 103/336 (30.65%), Postives = 168/336 (50.00%), Query Frame = 0 Query: 22 KKAKTDEALAVVDDQTQLQAAGP-PRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTL----NGVTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWS-PDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSAS--SDRQIYL 349 KK +T+ A A + + P P N L H + + KF P+G+ LAS+ D+ I +W Y + S H I D+ ++ D + + S DKT+ I+D ++ + +K LKGH+NYV + + LIVSGS D S+R+WD + ++TL + V++V FN ++S+ D +IWD +++ ++ + SP+G Y+L +DN+L++WD +C K TGH++ EK + +S G + +GS D VYIW+ +++I+ KL GH V H E II SA+ +D+ I L Sbjct: 6 KKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTL--AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWS-SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD----YSKGKCLKTYTGHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKL 329
BLAST of wd repeat-containing protein 57 vs. nr
Match: gi|350407923|ref|XP_003488245.1| (U5 small nuclear ribonucleoprotein 40 kDa protein [Bombus impatiens]) HSP 1 Score: 441.425 bits (1134), Expect = 3.426e-152 Identity = 218/351 (62.11%), Postives = 265/351 (75.50%), Query Frame = 0 Query: 10 PTVDPNAG----ALVVKKAKTDEALAVVDDQTQLQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 P +D G ALV +T + + + GPPR+S+L +PIMLL G HQG+IF+ +FHP+GQ LAS GFDR I +WNVYGECEN V+ H+GAI++LHF+ DG ++YT STD T+G++D RIK+LKGHT++VNSV ARRG + SGSDD +IRVWD RKR TLN VT+VTFNDTA+QVIS GIDN +K+WDLRK N L GH+DTITG+SLSPDGSY+L+NA+DN+LRIWDVRPF +RC KII+GHQHNFEKNLL+C WSPDG+ VSAGSSDRF YIWDTTSR+ILYKLPGH G+VND+DFH EPI+ S SSD+QIYLGE E Sbjct: 2 PILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQNGPPRTSSLFAPIMLLEG-HQGDIFSLEFHPEGQYLASTGFDRQIFIWNVYGECENISVLTG-HSGAIMELHFS-PDGNHLYTASTDMTLGLWDIAAGTRIKKLKGHTSFVNSVSGARRGLTQLCSGSDDSTIRVWDPRKRGQCYTLNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRK-NSILYKLKGHSDTITGLSLSPDGSYILSNAVDNTLRIWDVRPFAPYERCVKIISGHQHNFEKNLLRCAWSPDGSKVSAGSSDRFHYIWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIE 348
BLAST of wd repeat-containing protein 57 vs. nr
Match: gi|340721816|ref|XP_003399310.1| (U5 small nuclear ribonucleoprotein 40 kDa protein [Bombus terrestris]) HSP 1 Score: 441.039 bits (1133), Expect = 3.780e-152 Identity = 218/351 (62.11%), Postives = 265/351 (75.50%), Query Frame = 0 Query: 10 PTVDPNAG----ALVVKKAKTDEALAVVDDQTQLQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 P +D G ALV +T + + + GPPR+S+L +PIMLL G HQG+IF+ +FHP+GQ LAS GFDR I +WNVYGECEN V+ H+GAI++LHF+ DG ++YT STD T+G++D RIK+LKGHT++VNSV ARRG + SGSDD +IRVWD RKR TLN VT+VTFNDTA+QVIS GIDN +K+WDLRK N L GH+DTITG+SLSPDGSY+L+NA+DN+LRIWDVRPF +RC KII+GHQHNFEKNLL+C WSPDG+ VSAGSSDRF YIWDTTSR+ILYKLPGH G+VND+DFH EPI+ S SSD+QIYLGE E Sbjct: 2 PILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQNGPPRTSSLFAPIMLLEG-HQGDIFSLEFHPEGQYLASTGFDRQIFIWNVYGECENISVLTG-HSGAIMELHFS-PDGNHLYTASTDMTLGLWDITAGTRIKKLKGHTSFVNSVSGARRGLTQLCSGSDDSTIRVWDPRKRGQCYTLNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRK-NSILYRLKGHSDTITGLSLSPDGSYILSNAVDNTLRIWDVRPFAPYERCVKIISGHQHNFEKNLLRCAWSPDGSKVSAGSSDRFHYIWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIE 348
BLAST of wd repeat-containing protein 57 vs. nr
Match: gi|749799559|ref|XP_011153332.1| (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Harpegnathos saltator] >gi|307191799|gb|EFN75237.1| WD repeat-containing protein 57 [Harpegnathos saltator]) HSP 1 Score: 441.039 bits (1133), Expect = 4.106e-152 Identity = 219/351 (62.39%), Postives = 266/351 (75.78%), Query Frame = 0 Query: 10 PTVDPNAG----ALVVKKAKTDEALAVVDDQTQLQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 P +D G ALV +T + + + +GPPR+S+L + IMLL G HQG+IF+ +FHP+GQ LAS GFDR I +WNVYGECEN V+ S H+GA+++LHF+ DG ++YT STD T+G++D RIK+LKGHT +VNSV ARRG L+ SGSDD +IRVWD RKR TLN VT+VTFNDTA+QVIS GIDN +K+WDLRK N L GHTDTITG+SLSPDGSYVL+NAMDN+L+IWDVRPF +RC KI++GHQHNFEKNLL+C WSPDG+ VSAGSSDRF YIWDTTSR+ILYKLPGH G+VND+DFH EPI+ S SSD+QIYLGE E Sbjct: 2 PILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQSGPPRTSSLMAMIMLLEG-HQGDIFSLEFHPEGQYLASTGFDRQIFIWNVYGECENIAVM-SGHSGAVMELHFS-PDGNHLYTASTDMTLGLWDIVAGTRIKKLKGHTLFVNSVSGARRGPTLLCSGSDDSTIRVWDPRKRGQCYTLNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRK-NAVLYKLKGHTDTITGLSLSPDGSYVLSNAMDNTLKIWDVRPFAPFERCVKILSGHQHNFEKNLLRCAWSPDGSKVSAGSSDRFHYIWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIE 348
BLAST of wd repeat-containing protein 57 vs. nr
Match: gi|1270067952|ref|XP_022796752.1| (U5 small nuclear ribonucleoprotein 40 kDa protein-like isoform X1 [Stylophora pistillata] >gi|1270067956|ref|XP_022796754.1| U5 small nuclear ribonucleoprotein 40 kDa protein-like isoform X3 [Stylophora pistillata]) HSP 1 Score: 440.654 bits (1132), Expect = 4.987e-152 Identity = 203/342 (59.36%), Postives = 268/342 (78.36%), Query Frame = 0 Query: 15 NAGALVVKKAKTDEALAVVDDQTQLQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 N+GALV K LA+ D +Q P R+S+LE+PIMLLSG H+GEIFT++FHP G+ LASAGFDR I LWNVYGECEN+ V+ H GA+++LHF+ DG M+T STDKT+GI+D T RIK+LKGH++++NS +P+RRG +VSG+DDC++++WD RKR QT VT+V+FNDT+DQ++S GID ++K+WDLRK N +SGHTDT+TG+SLSPDGS++L+NAMDN++R+WD+RPF +RC K+ TG QHNFEKNL++C WSPDG M+S+GS+DRFVY+WDT SR+ILYKLPGH G+VNDVDFH E I++S SD++IYLGE + Sbjct: 11 NSGALVAVKKPKQNQLALKDQGGAIQTL-PQRTSSLEAPIMLLSG-HEGEIFTSRFHPSGETLASAGFDRLIYLWNVYGECENFAVLKG-HTGAVMELHFSL-DGSTMFTASTDKTLGIWDYETGSRIKKLKGHSSFINSCYPSRRGPQYVVSGADDCTVKLWDTRKRGCAQTFQNIYQVTAVSFNDTSDQILSGGIDKEIKVWDLRK-NDVLYKMSGHTDTVTGVSLSPDGSFILSNAMDNTVRMWDIRPFAPLERCLKVFTGAQHNFEKNLIRCSWSPDGLMISSGSADRFVYVWDTNSRRILYKLPGHDGSVNDVDFHPNELILMSCGSDKKIYLGELQ 347
BLAST of wd repeat-containing protein 57 vs. nr
Match: gi|780642309|ref|XP_011688309.1| (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Wasmannia auropunctata]) HSP 1 Score: 440.654 bits (1132), Expect = 6.789e-152 Identity = 215/351 (61.25%), Postives = 266/351 (75.78%), Query Frame = 0 Query: 10 PTVDPNAG----ALVVKKAKTDEALAVVDDQTQLQAAGPPRSSNLESPIMLLSGSHQGEIFTAKFHPDGQILASAGFDRTICLWNVYGECENYHVINSVHAGAILDLHFAYEDGQYMYTGSTDKTVGIFDTNTAQRIKRLKGHTNYVNSVHPARRGEPLIVSGSDDCSIRVWDQRKRNAVQTLNG---VTSVTFNDTADQVISAGIDNQVKIWDLRKPNQPSSILSGHTDTITGMSLSPDGSYVLTNAMDNSLRIWDVRPFVQNDRCTKIITGHQHNFEKNLLKCCWSPDGAMVSAGSSDRFVYIWDTTSRKILYKLPGHLGAVNDVDFHKVEPIILSASSDRQIYLGEFE 353 P +D G ALV +T + + + +GPPR+S+L S IMLL G HQG+IF+ +FHP+GQ LAS GFDR I +WNVYGECEN ++ H+GA+++LHF+ DG ++YT STD T+G++D RIK+LKGHT++VNSV ARRG L+ SGSDD +IRVWD RKR TLN VT+VTFNDTA+QVIS GIDN +K+WDLRK N L GHTDTITG+SLSPDGSY+L+NAMDN+L+IWDVRPF +RC KI++GHQHNFEKNLL+C WSPDG+ VS+GSSDRF Y+WDTTSR+ILYKLPGH G+VND+DFH EPI+ S SSD+QIYLGE E Sbjct: 2 PILDKRKGDDILALVPASKRTKNEVVFSSREKAVVQSGPPRTSSLMSMIMLLEG-HQGDIFSIEFHPEGQYLASTGFDRQIFIWNVYGECENIGIMTG-HSGAVMELHFS-PDGNHLYTASTDMTLGLWDIVAGTRIKKLKGHTSFVNSVSGARRGPTLLCSGSDDSTIRVWDPRKRGQCYTLNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRK-NAVLYKLKGHTDTITGLSLSPDGSYILSNAMDNTLKIWDVRPFAPYERCVKILSGHQHNFEKNLLRCAWSPDGSKVSSGSSDRFHYVWDTTSRRILYKLPGHNGSVNDIDFHPKEPIVCSGSSDKQIYLGEIE 348 The following BLAST results are available for this feature:
BLAST of wd repeat-containing protein 57 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of wd repeat-containing protein 57 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of wd repeat-containing protein 57 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold225_size250570:100498..106426- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold225_size250570-snap-gene-1.16 ID=maker-scaffold225_size250570-snap-gene-1.16|Name=wd repeat-containing protein 57|organism=Tigriopus kingsejongensis|type=gene|length=5929bp|location=Sequence derived from alignment at scaffold225_size250570:100498..106426- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'wd repeat-containing protein 57' has the following synonyms
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