hypothetical protein, maker-scaffold228_size248166-snap-gene-0.9 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000004486 (supercontig:LSalAtl2s:LSalAtl2s2341:3366:4537:-1 gene:EMLSAG00000004486 transcript:EMLSAT00000004486 description:"maker-LSalAtl2s2341-augustus-gene-0.2") HSP 1 Score: 120.168 bits (300), Expect = 1.286e-31 Identity = 81/269 (30.11%), Postives = 119/269 (44.24%), Query Frame = 0 Query: 81 DPETGYCCVEKDEVVTSIQKDPILECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNG--QGPEECRTVYESSCSTKY-----IEKQPG-KFVGDTSCEKLPV----------------------------------------------------EICG-AGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQVEKPLRTKWCLDPS 288 D + G CV+K V + D LEC H +KCH TYVT F +A E CE F+K C I+FK E V+KC+ P K C QG C+ +YE C T++ ++ +P + V D C+ + + E+C C T G E CH+ + T + ++PEE CDL P++ CR ++ LVP+L P+ C +P+E C +P+ + KP+ WC DP Sbjct: 62 DVKDGQKCVQKIIQVQETEYDRGLECQHTFKKKCHVTYVTDFSSAPERRCETTFKKNCHISFKAVPYTEKVKKCHTPYTKKCGDEIQGELVCKDIYEDFCETRFKKYDILQDEPECELVKDLRCKNITIDLLHIPHDNDGGSKVPYAVKETCENWPKQKCELKKKTVQKIHPKTECKKVSREVCAPENCETLPGEEICHEDSQTRIQNIPEENCDLEPEENCRLESTLVPKLVPKENCVKVPKEICVNTKKNPKTITKPILKNWCYDPK 330
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000001807 (supercontig:LSalAtl2s:LSalAtl2s130:142383:143529:-1 gene:EMLSAG00000001807 transcript:EMLSAT00000001807 description:"maker-LSalAtl2s130-augustus-gene-1.7") HSP 1 Score: 115.931 bits (289), Expect = 3.644e-30 Identity = 85/262 (32.44%), Postives = 123/262 (46.95%), Query Frame = 0 Query: 85 GYCCVEKDEVVTSIQKDPILECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNG--QGPEECRTVYESSCSTKY-------------------------------IEKQPGKFVGDTSCEKLPV------------------------EICG-AGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQVEKPLRTKWCLDPS 288 G C++K + + D ++C H KCH TY+T + ++ EE C+ +F+K C ITFK E ++ C+ PL + CN QGPE C T YE+ C TKY K F CEK PV EIC + C T G E C ++T T + +VPEE CDL PQ+ CR ++ LVPRL P++ C +P+E C +P++V+KP+ +WC +P+ Sbjct: 71 GTYCLKKVVEIEETEFDRGMDCHHTFQRKCHLTYITDYSSSSEEKCDTDFKKNCHITFKPVPHNEKIKICHTPLIRQCNDQTQGPEVCTTEYENYCETKYKVYELDQDEPKCQMVEEVRCLNVTVELFQIDSSKTSPPFALREKCEKWPVQKCELNKKTVTKVHPETSCKKIPKEICAPSNCKTLPGEEICKEETRTLVQNVPEEDCDLEPQENCRMESSLVPRLVPKNNCIKVPKEVCVNTKKNPKKVKKPIIKEWCFNPN 332
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000000128 (supercontig:LSalAtl2s:LSalAtl2s1020:112711:132784:1 gene:EMLSAG00000000128 transcript:EMLSAT00000000128 description:"maker-LSalAtl2s1020-augustus-gene-0.16") HSP 1 Score: 100.908 bits (250), Expect = 1.005e-23 Identity = 70/223 (31.39%), Postives = 102/223 (45.74%), Query Frame = 0 Query: 85 GYCCVEKDEVVTSIQKDPILECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNG-QGPEECRTVYESSCSTKYI-----EKQPG----------------KFVGDTS----------CEKLPVEICG-------------------------AGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPR 250 G CV K V + +EC H +KCH TY+T + ++ E+ C+ F+K C ITF E V+ C+ PL + CNG GPE C+T YE+ C T+Y + +P +GD + CEK PV+ C + CVT+ G E CH+++ T + ++PEE CDL PQ+ C ++ LVPR Sbjct: 428 GKRCVPKVVEVEETVYERGMECQHTFSKKCHLTYITDYSSSAEKKCDTTFKKNCHITFNPVPHNEKVKVCHTPLIRECNGDDGPEICKTEYENHCETQYKVYELEQDEPNCRMVEELRCQNVTVELFHIGDDNGGSPFAVKEKCEKWPVQKCDLQKNNVKKVHPETSCKKVPREVCAPSNCVTKPGDEICHEESRTQIQNIPEEECDLQPQENCHMESSLVPR 650 HSP 2 Score: 63.929 bits (154), Expect = 1.941e-11 Identity = 32/92 (34.78%), Postives = 56/92 (60.87%), Query Frame = 0 Query: 184 EKQPGKFVGDTSCEKLPVEICG-AGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQ 274 +K+ K T C K+P ++C + C T+ G E C++++ T + +VP+E C L P++ CR + LVPRL P++ C +P+E C +P++ Sbjct: 247 KKKVTKVHPKTECTKVPKKVCTPSNCKTKPGEEICYEESRTHIQNVPDEECGLQPEENCRMEASLVPRLVPKNNCIKVPKEVCVTTKKNPKK 338 HSP 3 Score: 63.1586 bits (152), Expect = 3.484e-11 Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0 Query: 189 KFVGDTSCEKLPVEICG-AGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLK 252 K +TSC K P EIC + CVT+ G E CH+++ T + +VPEE CDL P++ C Q+ LVPR + Sbjct: 779 KVHPETSCRKAPREICAPSNCVTKPGKEICHEESRTHIQNVPEEDCDLQPEENCHLQSSLVPRFQ 843
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000005780 (supercontig:LSalAtl2s:LSalAtl2s310:3258:4806:1 gene:EMLSAG00000005780 transcript:EMLSAT00000005780 description:"maker-LSalAtl2s310-augustus-gene-0.6") HSP 1 Score: 95.1301 bits (235), Expect = 1.551e-22 Identity = 77/274 (28.10%), Postives = 112/274 (40.88%), Query Frame = 0 Query: 88 CVEKDEVVTSIQKDPILECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNG--QGPEECRTVYESSCSTKYI--------------------------------------EKQPGKFVGDTS--------CEKLPVEICG-------------------------AGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQVEKPLRTKWCLDPS 288 C+ K V IQ + C H +KCH TY T + + E+ C+ F+K C I F V+ C+ PL + CN +GPE C T YE+ C TK+ E + G D + CEK PV+ C + C G E C+ +T T + ++PEE CDL P + C+ ++ LVPRL P+ C +P+E C +P +V+KP+ +WC DP Sbjct: 64 CIPKTIFVEEIQYERGRNCHHTVGKKCHITYTTDYTSTTEKKCKTEFKKNCFINFISVPHNVKVKICHTPLVRKCNDEVEGPEVCTTQYENHCETKFKTYILDQDEPVCEMKEEVRCMNMTVELHHIFDEQHNKKNEDRRGDVDSDVTPPNVIKEKCEKWPVQSCKLETKTITKVHPETSCSKVPKKICVPSNCKMFPGEEICNQETRTQVQNIPEEACDLEPHENCQMESSLVPRLVPQQNCIKVPKEVCVNTKKNPTKVKKPITKQWCFDPK 337
BLAST of hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000012693 (supercontig:LSalAtl2s:LSalAtl2s963:3547:4590:-1 gene:EMLSAG00000012693 transcript:EMLSAT00000012693 description:"augustus-LSalAtl2s963-processed-gene-0.0") HSP 1 Score: 94.7449 bits (234), Expect = 1.865e-22 Identity = 75/203 (36.95%), Postives = 102/203 (50.25%), Query Frame = 0 Query: 59 GRQGRQGGSAQSAGVDFSGCQNDPETGYCCVEKDEVVTSIQKDPILECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNGQGPEECRTVYESSCSTKYIEKQPGKFVGDTSCEKLPVEICGAGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIP 261 R RQGG +D G C++K +V + D +EC H E+CH TY T FE QEE CEENF+K+C I +K+ A +ETV+ C+ PL VC G+GPEEC+TVYES C TKY E V +CE + E C E + + + E+ C P++ C + K V + P+ EC P Sbjct: 75 NRLARQGG-GDDVPLDIGSIA---AAGERCIDKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEECEENFKKSCFIEYKKVAVDETVKFCHTPL--VCEGEGPEECKTVYESECETKYHEHDVEDDV--VNCETIQEEKC-------EDVTQGY---------TTEQKCTKWPKQVCTNEKKNVKKYSPQTECKKFP 253
BLAST of hypothetical protein vs. nr
Match: gi|155966212|gb|ABU41060.1| (hypothetical protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 125.946 bits (315), Expect = 3.259e-31 Identity = 76/192 (39.58%), Postives = 102/192 (53.12%), Query Frame = 0 Query: 142 FKQQATEETVRKCYKPLEKVCNGQGPEECRTVYESSCSTKYIE-------------------------------------------KQPGKFVGDTSCEKLPVEICG-AGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQVEKPLRTKWCLDPSA 289 +K+ A +ETV+ C+ PL VC G GPEEC+TVYES C TKY E K K+ T C+K+P ++CG +GC+ + G EEC DK T + +VPEE C+L PQK C+ TKLVP LKP EC +P+E C+ +P++V+KP+ KWC PSA Sbjct: 1 YKKVAVDETVKFCHTPL--VCEGDGPEECKTVYESECETKYHEHDVEDDVVNCETIQEEKCEDVTQGYTTEQKCTKWPKQVCTSEKKNVKKYSPQTECKKVPRQLCGPSGCIPQPGPEECFDKKETIVQEVPEENCNLEPQKACKQVTKLVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPSA 190
BLAST of hypothetical protein vs. nr
Match: gi|1325258437|ref|XP_023325758.1| (rho GTPase-activating protein gacK-like [Eurytemora affinis]) HSP 1 Score: 133.265 bits (334), Expect = 5.830e-31 Identity = 84/250 (33.60%), Postives = 120/250 (48.00%), Query Frame = 0 Query: 83 ETGYCCVEKDEVVTSIQKDPILECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNGQGPEECRTVYESSCSTKYIEKQP-------------------------------------------GKFVGDTSCEKLPVEICG-AGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQVEKPLRTKWCLDPS 288 + G C++K + + D +LEC H +CH +Y T + A QEE CE+N++K C I + A TV C + L K C+ GP C T Y S C T E Q K+ TSC+K+PVE+CG + C T G +EC + T T + + PEE C L P+++C+ TKLVP+LKP C +P+E C+ +P++V KP+ KWC PS Sbjct: 101 QAGQRCIDKIVMEEETEYDEVLECDHSYDRRCHISYSTSYTAQQEEECEDNYKKNCFIKYSPTAFNATVEICRESLVKDCSVPGPVVCSTEYTSECQTVQHEHQVEDDVAECRSDVETKCNDVTSGYTTSQECSNWPIQRCDVNKKSVTKYSPQTSCQKVPVELCGPSSCPTVPGPQECFETTKTIISEKPEEECSLEPRQSCKHVTKLVPQLKPAESCVDVPKEICSRSLKNPRKVSKPVIKKWCYVPS 350
BLAST of hypothetical protein vs. nr
Match: gi|1325316586|ref|XP_023340014.1| (uncharacterized protein LOC111710188 [Eurytemora affinis]) HSP 1 Score: 124.79 bits (312), Expect = 2.174e-28 Identity = 78/228 (34.21%), Postives = 110/228 (48.25%), Query Frame = 0 Query: 105 ECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNGQGPEECRTVYESSCSTK------------------------------------------YIEKQPGKFVGDTS-CEKLPVEICGA-GCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQVEKPLRTKWCLDPS 288 +C H +KCH +Y T++ QEE C+++++K CQIT+ A TV+ C PL K CN GP ECRT Y S C +K + KQ K T+ CEK+P E+CG GC G E CH++ T + D+P E CD+ P+ C +KLVP+L P EC +P+E C+ ++V KP+ KWC P+ Sbjct: 275 KCEHSYDKKCHTSYSTEYSTQQEESCDDSYKKECQITYSPSARNITVQVCSNPLIKDCNLSGPLECRTEYVSECWSKDDEYTVLDDVPECETVTEQKCHEELVGYSTKEKCTEWPREVCTVNKQLKKKNNPTTKCEKVPQELCGPPGCGFVSGPEVCHEQIKTIVTDLPNETCDIQPRTNCEKVSKLVPKLVPVEECVDVPKEICSKVRVPGRKVLKPITKKWCYTPT 502
BLAST of hypothetical protein vs. nr
Match: gi|1325302878|ref|XP_023333007.1| (uncharacterized protein LOC111704869 isoform X1 [Eurytemora affinis]) HSP 1 Score: 123.25 bits (308), Expect = 5.754e-28 Identity = 85/274 (31.02%), Postives = 126/274 (45.99%), Query Frame = 0 Query: 83 ETGYCCVEKDEVVTSIQKDPILECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNGQ--GPEECRTVYESSCSTKY---------------IEKQPGKFVGDT---------------------------SCEKLPVEIC-------------------------GAGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQVEKPLRTKWCLDP 287 E CVEK V I D I++CTH EKCH ++T + +QEE C +FEK C IT++ A +E V C +PL+KVCN G E CRT YE+SC T+Y +EK+ V D +CE+ PV+ C + C + + C ++T + + ++P E CDL P++TC+ +T LVPRL + C +P+E C ++P++V KP+ +WC P Sbjct: 166 ENKVKCVEKVMQVEEIVHDNIIKCTHSFTEKCHNIFITDYAPSQEEKCSTSFEKNCHITYQPMAFDEKVEICDEPLKKVCNDSITGEEVCRTEYETSCETRYKIHTVEQDEPVCKMVMEKKCDGVVVDNQDQANNGRGRRSIARIENGEEFIRQAENCEEWPVQKCTLEKKTVTKSNPETSCQKHPKKVCTTSNCKFVQSEKTCREETRSLVQNIPSEDCDLEPRETCKLETVLVPRLVEKPNCVQVPKEICVEGKTNPRKVSKPVVKEWCYRP 439
BLAST of hypothetical protein vs. nr
Match: gi|1325302880|ref|XP_023333008.1| (uncharacterized protein LOC111704869 isoform X2 [Eurytemora affinis]) HSP 1 Score: 122.479 bits (306), Expect = 7.829e-28 Identity = 85/274 (31.02%), Postives = 126/274 (45.99%), Query Frame = 0 Query: 83 ETGYCCVEKDEVVTSIQKDPILECTHKNVEKCHYTYVTQFEAAQEEVCEENFEKTCQITFKQQATEETVRKCYKPLEKVCNGQ--GPEECRTVYESSCSTKY---------------IEKQPGKFVGDT---------------------------SCEKLPVEIC-------------------------GAGCVTEEGIEECHDKTITSLLDVPEEVCDLNPQKTCRFQTKLVPRLKPEHECTIIPRETCNLKFSSPQQVEKPLRTKWCLDP 287 E CVEK V I D I++CTH EKCH ++T + +QEE C +FEK C IT++ A +E V C +PL+KVCN G E CRT YE+SC T+Y +EK+ V D +CE+ PV+ C + C + + C ++T + + ++P E CDL P++TC+ +T LVPRL + C +P+E C ++P++V KP+ +WC P Sbjct: 164 ENKVKCVEKVMQVEEIVHDNIIKCTHSFTEKCHNIFITDYAPSQEEKCSTSFEKNCHITYQPMAFDEKVEICDEPLKKVCNDSITGEEVCRTEYETSCETRYKIHTVEQDEPVCKMVMEKKCDGVVVDNQDQANNGRGRRSIARIENGEEFIRQAENCEEWPVQKCTLEKKTVTKSNPETSCQKHPKKVCTTSNCKFVQSEKTCREETRSLVQNIPSEDCDLEPRETCKLETVLVPRLVEKPNCVQVPKEICVEGKTNPRKVSKPVVKEWCYRP 437 The following BLAST results are available for this feature:
BLAST of hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold228_size248166:3480..7346- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold228_size248166-snap-gene-0.9 ID=maker-scaffold228_size248166-snap-gene-0.9|Name=hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=3867bp|location=Sequence derived from alignment at scaffold228_size248166:3480..7346- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein' has the following synonyms
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