af249896_1alpha lactalbumin, maker-scaffold23_size669530-snap-gene-3.10 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of af249896_1alpha lactalbumin vs. L. salmonis genes
Match: EMLSAG00000000561 (supercontig:LSalAtl2s:LSalAtl2s1091:12996:20054:-1 gene:EMLSAG00000000561 transcript:EMLSAT00000000561 description:"augustus-LSalAtl2s1091-processed-gene-0.0") HSP 1 Score: 56.225 bits (134), Expect = 3.074e-11 Identity = 27/73 (36.99%), Postives = 44/73 (60.27%), Query Frame = 0 Query: 44 IPKYVCIGCHETRYNSSAIHIGGH-----YGLFQFTHELWCQEDDVGGECEVKCS-DLADDDLTDDIKCLQKV 110 + ++C+ E+++NSSAI YGLFQ +++ WC E G C V+C+ D D DL DD+KC++++ Sbjct: 24 VNDWLCLTYWESQFNSSAIGRLNKDGSLDYGLFQLSNKYWCHEKRRGKACNVQCNKDFTDGDLEDDMKCVERI 96
BLAST of af249896_1alpha lactalbumin vs. SwissProt
Match: gi|126599|sp|P17897.1|LYZ1_MOUSE (RecName: Full=Lysozyme C-1; AltName: Full=1,4-beta-N-acetylmuramidase C; AltName: Full=Lysozyme C type P; Flags: Precursor) HSP 1 Score: 57.3806 bits (137), Expect = 5.983e-10 Identity = 31/120 (25.83%), Postives = 58/120 (48.33%), Query Frame = 0 Query: 18 SSQAKIFSQDEVVTALRDSGLIAEEDI--PKYVCIGCHETRYNSSAIHIG-----GHYGLFQFTHELWCQEDDV---GGECEVKCSDLADDDLTDDIKCLQKV-----PVKSWPTYEKFC 122 ++QAK++++ E+ L+ +G+ + +VC+ HE+ YN+ A + YG+FQ WC + C + CS L DD+T I+C ++V +++W + C Sbjct: 15 TAQAKVYNRCELARILKRNGMDGYRGVKLADWVCLAQHESNYNTRATNYNRGDRSTDYGIFQINSRYWCNDGKTPRSKNACGINCSALLQDDITAAIQCAKRVVRDPQGIRAWVAWRTQC 134
BLAST of af249896_1alpha lactalbumin vs. SwissProt
Match: gi|126598|sp|P08905.2|LYZ2_MOUSE (RecName: Full=Lysozyme C-2; AltName: Full=1,4-beta-N-acetylmuramidase C; AltName: Full=Lysozyme C type M; Flags: Precursor) HSP 1 Score: 56.6102 bits (135), Expect = 1.228e-9 Identity = 31/120 (25.83%), Postives = 56/120 (46.67%), Query Frame = 0 Query: 18 SSQAKIFSQDEVVTALRDSGLIA--EEDIPKYVCIGCHETRYNSSAIHIG-----GHYGLFQFTHELWCQEDDVG---GECEVKCSDLADDDLTDDIKCLQKV-----PVKSWPTYEKFC 122 ++QAK++ + E L+ +G+ + +VC+ HE+ YN+ A + YG+FQ WC + C + CS L DD+T I+C ++V +++W + C Sbjct: 15 TAQAKVYERCEFARTLKRNGMAGYYGVSLADWVCLAQHESNYNTRATNYNRGDQSTDYGIFQINSRYWCNDGKTPRAVNACGINCSALLQDDITAAIQCAKRVVRDPQGIRAWVAWRAHC 134
BLAST of af249896_1alpha lactalbumin vs. SwissProt
Match: gi|8928188|sp|P81708.1|LYSC1_CANFA (RecName: Full=Lysozyme C, milk isozyme; AltName: Full=1,4-beta-N-acetylmuramidase C) HSP 1 Score: 55.4546 bits (132), Expect = 2.834e-9 Identity = 31/115 (26.96%), Postives = 55/115 (47.83%), Query Frame = 0 Query: 22 KIFSQDEVVTALRDSGL--IAEEDIPKYVCIGCHETRYNSSAIHI-----GGHYGLFQFTHELWCQEDD--VGGECEVKCSDLADDDLTDDIKCLQKV-----PVKSWPTYEKFC 122 KIFS+ E+ L+ G+ + +VC+ +E+ +N+ A + YG+FQ + WC+ + C + CS DD++ DDI C ++V + +W + K C Sbjct: 1 KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPNGMSAWVAWVKHC 115
BLAST of af249896_1alpha lactalbumin vs. SwissProt
Match: gi|403399454|sp|G3XDT7.1|LYSC_DRONO (RecName: Full=Lysozyme C; AltName: Full=1,4-beta-N-acetylmuramidase C; Flags: Precursor) HSP 1 Score: 55.4546 bits (132), Expect = 3.484e-9 Identity = 33/132 (25.00%), Postives = 60/132 (45.45%), Query Frame = 0 Query: 5 KFASVGFFLVLWASSQAKIFSQDEVVTALRDSGLIAEE--DIPKYVCIGCHETRYNSSAIHIG----GHYGLFQFTHELWCQEDDVGGE---CEVKCSDLADDDLTDDIKCLQKV-----PVKSWPTYEKFC 122 KF + F +L +Q K+F + E+ A++ GL + +VC +E+ +N++AI+ YG+ Q WC + G C++ CS L D+T + C ++V + +W + C Sbjct: 2 KFFLILGFCLLPLIAQGKVFQRCELAAAMKKHGLSNYRGYSLGHWVCAAKYESNFNTAAINRNRDGSSDYGILQINSRWWCNDGRTSGAKNLCKISCSALLSSDITASVNCAKRVVSDKNGMNAWVAWRNHC 133
BLAST of af249896_1alpha lactalbumin vs. SwissProt
Match: gi|2506830|sp|P12069.2|LYSC3_PIG (RecName: Full=Lysozyme C-3; AltName: Full=1,4-beta-N-acetylmuramidase C; Flags: Precursor) HSP 1 Score: 55.0694 bits (131), Expect = 4.321e-9 Identity = 32/118 (27.12%), Postives = 55/118 (46.61%), Query Frame = 0 Query: 20 QAKIFSQDEVVTALRDSGLIAEEDI--PKYVCIGCHETRYNSSAIHIG-----GHYGLFQFTHELWCQEDDVG---GECEVKCSDLADDDLTDDIKCLQKV-----PVKSWPTYEKFC 122 QAK++ + E L+ SG+ + +VC+ E+ +N+ A + YG+FQ WC + C + C L DDDL+ DI+C ++V +K+W ++ C Sbjct: 17 QAKVYDRCEFARILKKSGMDGYRGVSLANWVCLAKWESNFNTKATNYNPGSQSTDYGIFQINSRYWCNDGKTPKAVNACHISCKVLLDDDLSQDIECAKRVVRDPQGIKAWVAWKAHC 134
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|1339093666|ref|XP_023708074.1| (lysozyme C-like [Cryptotermes secundus]) HSP 1 Score: 85.8853 bits (211), Expect = 1.835e-18 Identity = 45/121 (37.19%), Postives = 70/121 (57.85%), Query Frame = 0 Query: 11 FFLVLWASSQAKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAI----HIGGHY-GLFQFTHELWCQEDDVGGECEVKCSDLADDDLTDDIKCLQKVP----VKSWPTYEKFC 122 FLV S AKI ++ +++ L+ IA+ D+ VCI HE+ ++ A+ G HY G+FQ + WC+E+ VGG C + C+DL D++L DDIKC K+ ++W +Y K+C Sbjct: 10 LFLVTAHMSVAKILTKCQLLQELKKHN-IAKNDLATLVCIAQHESGLHTEALGGPTSNGAHYYGIFQISDRYWCRENGVGGGCNINCADLRDNNLADDIKCALKIKEAQGFRAWASYLKYC 129
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|1339093658|ref|XP_023708070.1| (lysozyme X-like [Cryptotermes secundus] >gi|1339093660|ref|XP_023708071.1| lysozyme X-like [Cryptotermes secundus]) HSP 1 Score: 85.5001 bits (210), Expect = 2.645e-18 Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 0 Query: 11 FFLVLWASSQAKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAI---HIGGHY--GLFQFTHELWCQEDDVGGECEVKCSDLADDDLTDDIKCLQKVP----VKSWPTYEKFC 122 FLV S A+I SQ +++ LR+ +A D+ +VCI HE+ N++A + G + G+FQ WC+E+ VGG C + C+ L DD+LTDDI C K+ +W Y ++C Sbjct: 10 LFLVTARMSVARILSQCQLLQELRNRN-VAGNDLATWVCIAQHESSLNTAARGGPNTDGSFDNGIFQINDRYWCRENGVGGSCNINCAALRDDNLTDDINCALKIKNVQGFTAWTVYSRYC 129
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|936559728|ref|XP_014205697.1| (lysozyme-like [Copidosoma floridanum] >gi|936559731|ref|XP_014205706.1| lysozyme-like [Copidosoma floridanum]) HSP 1 Score: 86.2705 bits (212), Expect = 5.046e-18 Identity = 47/135 (34.81%), Postives = 74/135 (54.81%), Query Frame = 0 Query: 4 AKFASVGFFLVLWASSQ---AKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAIHIGGH-----YGLFQFTHELWCQEDDVGGECEVKCSDLADDDLTDDIKCLQKV----PVKSWPTYEKFCAPDP 126 A+ ++ + L++ S Q A+I + + + LR S +I + I VC+ HE+++N+S I G YG+FQ + + WC VGGEC+ KC D A+DD+ DDI C K+ +K WP +E+ C P Sbjct: 9 ARLVALAWCLLVVVSRQPSSARILKKCDAASELRRSKVINKSFIAHLVCVMQHESKFNTSLIRGPGSKSSYSYGVFQISSDKWCSRYRVGGECQKKCDDFANDDIQDDIVCADKIFKMEGLKHWPGWERNCKNGP 143
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|1339093650|ref|XP_023708065.1| (lysozyme c-1-like [Cryptotermes secundus] >gi|1339093652|ref|XP_023708066.1| lysozyme c-1-like [Cryptotermes secundus]) HSP 1 Score: 81.6481 bits (200), Expect = 8.345e-17 Identity = 45/121 (37.19%), Postives = 68/121 (56.20%), Query Frame = 0 Query: 11 FFLVLWASSQAKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAI----HIGGHY-GLFQFTHELWCQEDDVGGECEVKCSDLADDDLTDDIKCLQKVP----VKSWPTYEKFC 122 FLV S AKI ++ +++ L + IA+ D+ VCI HE+ N+ A+ G HY G+FQ + WC + VGG+C + C+DL D++L DDIKC K+ +W TY ++C Sbjct: 10 LFLVTAHMSVAKILTKCQLLQELINHN-IAKNDLATLVCIAQHESGLNTEALGGPTSNGAHYYGIFQISDLYWCSDYGVGGDCNINCADLRDNNLADDIKCALKIKDSQGFTAWLTYSQYC 129
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|1339093654|ref|XP_023708067.1| (lysozyme P-like [Cryptotermes secundus] >gi|1339093656|ref|XP_023708068.1| lysozyme P-like [Cryptotermes secundus]) HSP 1 Score: 81.2629 bits (199), Expect = 1.103e-16 Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = 0 Query: 11 FFLVLWASSQAKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAIHIGG-------HYGLFQFTHELWCQEDDVGGECEVKCSDLADDDLTDDIKCLQKVP----VKSWPTYEKFC 122 FLV S AKI ++ +++ L+ +A+ D+ +VCI HE+ N++A GG G+FQ WC+E+ VGG C + C+DL +L +DIKC K+ K+W TY K+C Sbjct: 10 LFLVTAHMSVAKILTKCQLLQELKKHN-VAKNDLATWVCIAQHESSLNTAAK--GGPNTDRSYDNGIFQINDRYWCRENGVGGSCNINCADLRKSNLANDIKCALKIRKSQGFKAWITYSKYC 129
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|1339093662|ref|XP_023708072.1| (lysozyme C-like [Cryptotermes secundus]) HSP 1 Score: 79.7221 bits (195), Expect = 5.119e-16 Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 0 Query: 5 KFASVGFFLVLWAS--SQAKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAI---HIGGHY--GLFQFTHELWCQEDDVGGECEVKCSDLADDDLTDDIKCLQKVP----VKSWPTYEKFC 122 + SV L+L S S AK F++ + + L+ G A++D+ +VCI HE+ N+ A + G Y G+FQ WC+E VGG C + C+ L DD++ DDIKC K+ K+W TY K+C Sbjct: 2 RAVSVCLILLLVTSHMSVAKKFTKCQFLKELK-KGNAAKKDLATWVCIAQHESGLNTRARGGPNKDGSYDNGIFQINDRYWCKEKGVGGSCNINCAKLRDDNVADDIKCALKIKKSQGFKAWVTYPKYC 129
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|1080050858|ref|XP_018566901.1| (lysozyme c-1-like [Anoplophora glabripennis]) HSP 1 Score: 76.2554 bits (186), Expect = 1.196e-14 Identity = 37/119 (31.09%), Postives = 67/119 (56.30%), Query Frame = 0 Query: 17 ASSQAKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAIHIG-GHYGLFQFTHELWCQEDDV-GGECEVKCSDLADDDLTDDIKCLQKVPVKS----------WPTYEKFCA 123 A + K+F+ E+ L +G ++ + +P +VCI HE+ +++ A++ G YG+FQ +H WC + D G EC + C L +DD++DDI+C + ++ W TY+ +C+ Sbjct: 16 AGVKCKLFTNCELAQTLVGNG-VSRDQVPTWVCIAQHESNFDTQAVNGNTGDYGIFQISHLFWCNDGDTPGKECHITCKALLNDDISDDIRCANLIFSQTKNLGGCGFCAWVTYKNYCS 133
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|1276516437|gb|PIO14387.1| (Lysozyme C [Rana catesbeiana]) HSP 1 Score: 75.8702 bits (185), Expect = 2.129e-14 Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 0 Query: 11 FFLVLWASSQAKIFSQDEVVTALRDSGLIAEE--DIPKYVCIGCHETRYNSSAIHIGG---HYGLFQFTHELWCQEDDVGGE---CEVKCSDLADDDLTDDIKCLQKV-----PVKSWPTYEKFC 122 FL L+A+S+AKIFS ++ L+ +GL + ++C+ +E+RY ++A + G YG+FQ WC + G C + C+ L +DD+TDDI C ++V + +W + +C Sbjct: 8 LFLALFAASEAKIFSNCDLAKVLKVNGLAGYHGYSLANWMCMAYYESRYTTNASYDNGWSTDYGIFQINSYWWCNDGKTSGAVGGCSISCNSLMNDDITDDITCAKRVVRDPNGMGAWVAWNNYC 132
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|1044897032|gb|ANU06044.1| (C-type lysozyme [Rhynchophorus ferrugineus]) HSP 1 Score: 75.485 bits (184), Expect = 2.323e-14 Identity = 36/119 (30.25%), Postives = 60/119 (50.42%), Query Frame = 0 Query: 20 QAKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAIH-IGGHYGLFQFTHELWCQEDDVGGE-CEVKCSDLADDDLTDDIKCL-----------QKVPVKSWPTYEKFCAPD 125 AK++++ E ++ G+ + D+ + CI HE+ +N+ A++ + G YG+ Q H WC G+ C + C+ L DD+T DIKC K +W TY+K+C D Sbjct: 19 NAKVYTKCEFAQEMKKHGVTSHADLGTWTCIASHESAFNTKAVNSVSGDYGILQINHYYWCSTTSTPGKGCNITCASLLTDDITVDIKCALHIFSETAKGSTKNGFTAWVTYKKYCTGD 137
BLAST of af249896_1alpha lactalbumin vs. nr
Match: gi|429843480|gb|AGA16574.1| (P-type lysozyme [Coptotermes formosanus]) HSP 1 Score: 74.7146 bits (182), Expect = 3.832e-14 Identity = 36/121 (29.75%), Postives = 67/121 (55.37%), Query Frame = 0 Query: 11 FFLVLWASSQAKIFSQDEVVTALRDSGLIAEEDIPKYVCIGCHETRYNSSAIHIGGH-----YGLFQFTHELWCQEDDVGGECEVKCSDLADDDLTDDIKCLQKVP----VKSWPTYEKFC 122 +V +S A+ F+ ++++ LR G+ E + ++CI E+ N++AI+ G+FQ + WC+++ GGEC + C+ L +DD++DDI+C Q + ++W TY +C Sbjct: 10 LVIVTAHTSLARKFTPCQLLSELRRHGVPGNE-LATWICIAQRESALNTAAINRANTDGSRDNGIFQINNRYWCRDNGRGGECNLNCAALRNDDISDDIRCAQHIKRVQGFRAWTTYGPYC 129 The following BLAST results are available for this feature:
BLAST of af249896_1alpha lactalbumin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of af249896_1alpha lactalbumin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of af249896_1alpha lactalbumin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold23_size669530:274558..277302+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold23_size669530-snap-gene-3.10 ID=maker-scaffold23_size669530-snap-gene-3.10|Name=af249896_1alpha lactalbumin|organism=Tigriopus kingsejongensis|type=gene|length=2745bp|location=Sequence derived from alignment at scaffold23_size669530:274558..277302+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'af249896_1alpha lactalbumin' has the following synonyms
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