60s ribosomal protein l23a, maker-scaffold245_size240363-snap-gene-1.26 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Match: EMLSAG00000006826 (supercontig:LSalAtl2s:LSalAtl2s384:78188:79034:-1 gene:EMLSAG00000006826 transcript:EMLSAT00000006826 description:"maker-LSalAtl2s384-snap-gene-1.10") HSP 1 Score: 209.92 bits (533), Expect = 1.007e-70 Identity = 103/138 (74.64%), Postives = 121/138 (87.68%), Query Frame = 0 Query: 43 QKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 QKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+ +RNRMDA+NIIKHPLTTESAMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+V+ KKAYV+LA DYDALDVANKIGII Sbjct: 19 QKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPTRDPKYPRKSTAKRNRMDAHNIIKHPLTTESAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVS-----------KKAYVKLAPDYDALDVANKIGII 145
BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Match: EMLSAG00000004928 (supercontig:LSalAtl2s:LSalAtl2s259:302906:313875:1 gene:EMLSAG00000004928 transcript:EMLSAT00000004928 description:"snap_masked-LSalAtl2s259-processed-gene-3.3") HSP 1 Score: 112.464 bits (280), Expect = 3.664e-33 Identity = 50/75 (66.67%), Postives = 66/75 (88.00%), Query Frame = 0 Query: 62 KKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKAS 136 KKVRT+VHFK P+T+RP R PK+PRK+ + N +DA+NI+KHPLT+ES MKKIE+NNTLVFI NI+ANK+Q+K++ Sbjct: 6 KKVRTTVHFKAPRTYRPTRDPKYPRKSTVKWNHIDAHNIVKHPLTSESPMKKIENNNTLVFITNIRANKYQLKST 80
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|51338615|sp|P62752.1|RL23A_RAT (RecName: Full=60S ribosomal protein L23a >gi|51338637|sp|P62750.1|RL23A_HUMAN RecName: Full=60S ribosomal protein L23a; AltName: Full=Large ribosomal subunit protein uL23 >gi|51338638|sp|P62751.1|RL23A_MOUSE RecName: Full=60S ribosomal protein L23a >gi|108860929|sp|Q24JY1.1|RL23A_BOVIN RecName: Full=60S ribosomal protein L23a) HSP 1 Score: 198.749 bits (504), Expect = 8.350e-65 Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0 Query: 55 GTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 G H + KK+RTS F+RPKT R RQPK+PRK+ PRRN++D Y IIK PLTTESAMKKIEDNNTLVFI ++KANKHQIK +VKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 31 GVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|1350713|sp|P48162.1|R23A1_CAEEL (RecName: Full=60S ribosomal protein L23a 1) HSP 1 Score: 176.792 bits (447), Expect = 3.570e-56 Identity = 90/147 (61.22%), Postives = 113/147 (76.87%), Query Frame = 0 Query: 34 AKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 A AP ++ KA +KKVVKG T ++VRTSVHF+RP T + RQ +FPRK+ P+ ++MD + II+HPLTTESAMKKIE++NTLVFI + ANK+QIK +V KLY++ KVNTLI P QKKAYVRL +DYDALDVANKIG+I Sbjct: 2 APSAPAKTA-KALDAKKKVVKGKRTTHRRQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHPLTTESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVRLTADYDALDVANKIGVI 147
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|1350700|sp|P48045.1|RL25_KLULA (RecName: Full=60S ribosomal protein L25) HSP 1 Score: 174.096 bits (440), Expect = 3.719e-55 Identity = 79/137 (57.66%), Postives = 108/137 (78.83%), Query Frame = 0 Query: 44 KAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 KA +K VVKGT+G + KVRTS F+ PKT + R PK+ KA+P NR+D+Y +I+ P+T+E+AMKK+ED NTLVF ++KANK+QIK +VK+LY+++V VNTL+RP+G KKAYVRL +D+DALD+AN+IG I Sbjct: 6 KATAAKKAVVKGTNGKKALKVRTSASFRLPKTLKLARSPKYATKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNTLVFKVSLKANKYQIKKAVKELYEVDVLSVNTLVRPNGTKKAYVRLTADFDALDIANRIGYI 142
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|132823|sp|P08792.1|RL25_CYBJA (RecName: Full=60S ribosomal protein L25) HSP 1 Score: 170.629 bits (431), Expect = 8.654e-54 Identity = 81/137 (59.12%), Postives = 105/137 (76.64%), Query Frame = 0 Query: 44 KAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 KA +K VVKG++G++ KVRTS F+ PKT + R PK+ RKA+P R+D Y +I P+ +E+AMKK+ED NTLVF +IKANKHQIK +VK LY+++V VNTLIRP+G KKAYVRL +D+DALD+ANKIG I Sbjct: 6 KAASAKKAVVKGSNGSKALKVRTSTTFRLPKTLKLTRAPKYARKAVPHYQRLDNYKVIVAPIASETAMKKVEDGNTLVFQVDIKANKHQIKQAVKDLYEVDVLAVNTLIRPNGTKKAYVRLTADHDALDIANKIGYI 142
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|2500306|sp|Q20647.1|R23A2_CAEEL (RecName: Full=60S ribosomal protein L23a 2) HSP 1 Score: 168.703 bits (426), Expect = 5.001e-53 Identity = 86/139 (61.87%), Postives = 105/139 (75.54%), Query Frame = 0 Query: 42 VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 V KA + +K VVKG+ K VRTSVHF+RPKT R P++ RK+ P R+++D++ +IK P TTES+MKKIED+NTLVFI + KANKH IK +V LY++ KVNTLI P QKKAYVRLASDYDALDVANKIG I Sbjct: 8 VGKAIQAKKAVVKGSKTNVRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQKKAYVRLASDYDALDVANKIGFI 146
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|1710524|sp|P04456.4|RL25_YEAST (RecName: Full=60S ribosomal protein L25; AltName: Full=Large ribosomal subunit protein uL23; AltName: Full=RP16L; AltName: Full=YL25; AltName: Full=YP42') HSP 1 Score: 165.236 bits (417), Expect = 8.985e-52 Identity = 74/126 (58.73%), Postives = 101/126 (80.16%), Query Frame = 0 Query: 55 GTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 GT+G + KVRTS F+ PKT + R PK+ KA+P NR+D+Y +I+ P+T+E+AMKK+ED N LVF ++KANK+QIK +VK+LY+++V KVNTL+RP+G KKAYVRL +DYDALD+AN+IG I Sbjct: 17 GTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI 142
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|6093882|sp|O74391.1|RL25B_SCHPO (RecName: Full=60S ribosomal protein L25-B) HSP 1 Score: 164.851 bits (416), Expect = 1.408e-51 Identity = 80/140 (57.14%), Postives = 106/140 (75.71%), Query Frame = 0 Query: 41 SVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 SV KA+ QK V KG H +KVRTS F+RPKT R+PK+ RK++P +R+D Y II +P+ +ESAMKKIED+NTLVF ++KANK IK +VKKLY ++ K+NTLIRP+G KKA+V+L++D DALDVAN+IG + Sbjct: 2 SVGKAKGAQKTVQKGIHNKVARKVRTSTTFRRPKTLELARKPKYARKSVPHASRLDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKNAVKKLYSVDAVKINTLIRPNGTKKAFVKLSADADALDVANRIGFL 141
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|2507312|sp|P51997.2|RL25_PUCGR (RecName: Full=60S ribosomal protein L25) HSP 1 Score: 164.851 bits (416), Expect = 2.200e-51 Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = 0 Query: 55 GTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 GT +++RTSV F+RPKT R R+PK+PR ++P RMDAY + PL TESAMKKIEDNNTL+FI ++KANK QI +VKKLYD+ +VNTLIRPDG+KKA+VRL + DALD+ANKIG I Sbjct: 33 GTSSKTQRRIRTSVTFRRPKTLRLSRKPKYPRTSVPHAPRMDAYRTLVRPLNTESAMKKIEDNNTLLFIVDLKANKRQIADAVKKLYDVTPLRVNTLIRPDGKKKAFVRLTPEVDALDIANKIGFI 158
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|49036456|sp|Q9AT35.1|RL23A_DAUCA (RecName: Full=60S ribosomal protein L23a) HSP 1 Score: 163.31 bits (412), Expect = 9.045e-51 Identity = 91/138 (65.94%), Postives = 106/138 (76.81%), Query Frame = 0 Query: 44 KAQKVQKKVVKGTHGTR-VKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 +A K K V GT + VKK+RTSV F RP+T R PK+PR + RN++D Y I+K+PLTTESAMKKIEDNNTLVFI +I+ANK +IK +VKK+YDI KVNTLIRPDG KKAYVRL DYDALDVANKIGII Sbjct: 17 QALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|3122703|sp|O22644.1|RL23A_FRIAG (RecName: Full=60S ribosomal protein L23A) HSP 1 Score: 161.384 bits (407), Expect = 5.416e-50 Identity = 92/139 (66.19%), Postives = 109/139 (78.42%), Query Frame = 0 Query: 44 KAQKVQKKVVKG--THGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 +A KV K V G T + KK+RTSV F RPKT + R PK+PR + P RN++D Y I+K+PLTTESAMKKIEDNNTLVFI +I+A+K +IKA+VKK+YDI KVNTLIRPDG KKAYVRL DYDALD+ANKIGII Sbjct: 16 QALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|998517515|ref|XP_015519588.1| (PREDICTED: 60S ribosomal protein L23a [Neodiprion lecontei]) HSP 1 Score: 239.58 bits (610), Expect = 2.895e-77 Identity = 120/163 (73.62%), Postives = 137/163 (84.05%), Query Frame = 0 Query: 18 PKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 PKK A KK KAP + VQKA K QKK++KG HG+RV+K+RTSVHF RPKTFRP R PK+PRK++P RNRMDA+NIIK PLTTE+AMKKIEDNNTLVFI + +ANK+ IK+SVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 75 PKKNASKKTPK-----GGKAPSKPVQKALKAQKKILKGVHGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAFNIIKFPLTTEAAMKKIEDNNTLVFIVHTRANKYHIKSSVKKLYDIDVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 232
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|665801362|ref|XP_008548688.1| (PREDICTED: 60S ribosomal protein L23a [Microplitis demolitor]) HSP 1 Score: 237.269 bits (604), Expect = 2.574e-76 Identity = 121/161 (75.16%), Postives = 134/161 (83.23%), Query Frame = 0 Query: 20 KTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 K + A K K K APV QKA K QKKV+KG HG+RV+K+RTSVHF RPKTFRP R PK+PRK++P RNRMDAYN+IK PLTTE+AMKKIEDNNTLVFI + +ANKH IKASVKKLYDI+VAKVNTLIRPDG KKAYVRLA DYDALDVANKIGII Sbjct: 80 KVVKNAAAKKIPKGGKAAPV---QKALKAQKKVLKGVHGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAYNVIKFPLTTEAAMKKIEDNNTLVFIVHTRANKHHIKASVKKLYDIDVAKVNTLIRPDGIKKAYVRLARDYDALDVANKIGII 237
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|1228012242|ref|XP_021938074.1| (uncharacterized protein LOC110838792 [Zootermopsis nevadensis] >gi|646697936|gb|KDR09351.1| 60S ribosomal protein L23a [Zootermopsis nevadensis]) HSP 1 Score: 240.736 bits (613), Expect = 4.093e-76 Identity = 112/140 (80.00%), Postives = 131/140 (93.57%), Query Frame = 0 Query: 41 SVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 ++QKA K QKKV+KG HGTR++KVRTSVHF+RPKTFRP R PK+PRK++P+RNRMDA+NIIK PLTTE+AMKKIEDNNTLVFI +I+ANKH ++A+VKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 211 ALQKALKAQKKVIKGLHGTRIRKVRTSVHFRRPKTFRPPRNPKYPRKSVPKRNRMDAFNIIKFPLTTEAAMKKIEDNNTLVFIVHIRANKHHVRAAVKKLYDIDVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 350
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|1069813241|ref|XP_018330187.1| (PREDICTED: 60S ribosomal protein L23a [Agrilus planipennis]) HSP 1 Score: 239.195 bits (609), Expect = 4.870e-76 Identity = 112/139 (80.58%), Postives = 129/139 (92.81%), Query Frame = 0 Query: 42 VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 VQKA KVQKKV+KG+ GT+ + +RTSVHF+RPKTFRP R PK+PRK++P+R+RMDAYNIIK+PLTTE+AMKKIEDNNTLVF+ +I ANKH IKA+VKKLYDINVAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 173 VQKALKVQKKVIKGSFGTKARIIRTSVHFRRPKTFRPPRNPKYPRKSVPKRSRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHINANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 311
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|315115345|gb|ADT80645.1| (ribosomal protein L23A [Euphydryas aurinia]) HSP 1 Score: 238.424 bits (607), Expect = 5.073e-76 Identity = 113/142 (79.58%), Postives = 128/142 (90.14%), Query Frame = 0 Query: 39 VRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 V+ V KA K QKKVVKG HG RV+K+RTSVHF+RPKTF P R PK+PRK++P+RNRMDAYNIIK+PLT+E+AMKKIEDNNTLVFI + +NKH IKA+VKKLYDINVAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 146 VKPVAKALKTQKKVVKGEHGKRVRKIRTSVHFRRPKTFEPPRNPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 287
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|817198981|ref|XP_012275158.1| (60S ribosomal protein L23a [Orussus abietinus]) HSP 1 Score: 235.728 bits (600), Expect = 1.161e-75 Identity = 118/166 (71.08%), Postives = 138/166 (83.13%), Query Frame = 0 Query: 15 KPVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 KPV KT + K+A A K P + VQKA K QKK++KG HG+RV+K+RTSVHF RPKTF P R PK+PR ++P+RNRMDA NIIK+PLTTE+AMKKIEDNNTLVFI + +ANK+ IK SVKKLY+I+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 77 KPVSTKTKKLVQAMKKAVKASKTPAKPVQKALKAQKKILKGVHGSRVRKIRTSVHFHRPKTFMPPRNPKYPRTSVPKRNRMDAVNIIKYPLTTEAAMKKIEDNNTLVFIVHTRANKYHIKGSVKKLYEIDVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 242
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|1279746597|ref|XP_022918379.1| (60S ribosomal protein L23a [Onthophagus taurus]) HSP 1 Score: 237.269 bits (604), Expect = 1.219e-75 Identity = 113/139 (81.29%), Postives = 127/139 (91.37%), Query Frame = 0 Query: 42 VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 V+KA+KVQ KV+KG HGT ++KVRTSVHF+RPKT RP R PK+PRKAIP RNRMDAYNIIK+PLTTE+AMKKIEDNNTLVF+ + ANKH I+A+VKKLYDINVAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 146 VEKAKKVQIKVIKGPHGTHIRKVRTSVHFRRPKTLRPPRNPKYPRKAIPNRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLVHTSANKHHIRAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 284
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|642936067|ref|XP_008198289.1| (PREDICTED: 60S ribosomal protein L23a [Tribolium castaneum] >gi|270014014|gb|EFA10462.1| 60S ribosomal protein L23a-like Protein [Tribolium castaneum]) HSP 1 Score: 237.269 bits (604), Expect = 2.181e-75 Identity = 123/171 (71.93%), Postives = 138/171 (80.70%), Query Frame = 0 Query: 10 PPKGKKPVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 PPK PKKT K + K K AP VQKA KVQKKV+KG +GT +K+RTSVHF RPKTFRP R PK+PRK++P R RMDAYNIIK PLTTE+AMKKIEDNNTLVF+ + +ANKH I+A+VKKLYDINVAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 134 PPKAIVTKPKKTVPVKQQKGVGK--KVAPAAPVQKALKVQKKVIKGPNGTHARKIRTSVHFHRPKTFRPPRNPKYPRKSVPSRTRMDAYNIIKFPLTTEAAMKKIEDNNTLVFLVHTRANKHHIRAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 302
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|759062643|ref|XP_011340675.1| (PREDICTED: 60S ribosomal protein L23a [Ooceraea biroi] >gi|607358583|gb|EZA52971.1| 60S ribosomal protein L23a [Ooceraea biroi]) HSP 1 Score: 234.572 bits (597), Expect = 2.940e-75 Identity = 113/159 (71.07%), Postives = 135/159 (84.91%), Query Frame = 0 Query: 22 AEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 ++KKA+ + P P +QKA K QKK++KG HG+RV+K+RTSVHF RPKTFRP R PK+PRK++P RNRMDA+NIIK PLTTE+AMKKIEDNNTLVFI + +ANK+ IKAS+KKLYD++VAKVNTLIRPDG+KKAYVRL DYDALDVANKIGII Sbjct: 82 SQKKAQIVKKTPKGGKPAAPLQKALKAQKKILKGVHGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAFNIIKFPLTTEAAMKKIEDNNTLVFIVHTRANKYHIKASIKKLYDVDVAKVNTLIRPDGKKKAYVRLTRDYDALDVANKIGII 240
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|1274110369|ref|XP_022819954.1| (60S ribosomal protein L23a [Spodoptera litura]) HSP 1 Score: 236.498 bits (602), Expect = 3.964e-75 Identity = 119/165 (72.12%), Postives = 136/165 (82.42%), Query Frame = 0 Query: 16 PVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180 P PKKT K + + KP V KA K Q+KVVKG HG RV+K+RTSVHF+RPKTF P R PK+PRK++P+RNRMDAYNIIK+PLT+E+AMKKIEDNNTLVFI + +NKH IKA+VKKLYDINVAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII Sbjct: 141 PKPKKTGIKGQKKQVVKP--------VAKALKAQRKVVKGEHGKRVRKIRTSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 297 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of 60s ribosomal protein l23a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l23a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold245_size240363:113591..115346- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold245_size240363-snap-gene-1.26 ID=maker-scaffold245_size240363-snap-gene-1.26|Name=60s ribosomal protein l23a|organism=Tigriopus kingsejongensis|type=gene|length=1756bp|location=Sequence derived from alignment at scaffold245_size240363:113591..115346- (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l23a' has the following synonyms
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