60s ribosomal protein l23a, maker-scaffold245_size240363-snap-gene-1.26 (gene) Tigriopus kingsejongensis

Overview
Name60s ribosomal protein l23a
Unique Namemaker-scaffold245_size240363-snap-gene-1.26
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Match: EMLSAG00000006826 (supercontig:LSalAtl2s:LSalAtl2s384:78188:79034:-1 gene:EMLSAG00000006826 transcript:EMLSAT00000006826 description:"maker-LSalAtl2s384-snap-gene-1.10")

HSP 1 Score: 209.92 bits (533), Expect = 1.007e-70
Identity = 103/138 (74.64%), Postives = 121/138 (87.68%), Query Frame = 0
Query:   43 QKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            QKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+  +RNRMDA+NIIKHPLTTESAMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+V+           KKAYV+LA DYDALDVANKIGII
Sbjct:   19 QKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPTRDPKYPRKSTAKRNRMDAHNIIKHPLTTESAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVS-----------KKAYVKLAPDYDALDVANKIGII 145          
BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Match: EMLSAG00000004928 (supercontig:LSalAtl2s:LSalAtl2s259:302906:313875:1 gene:EMLSAG00000004928 transcript:EMLSAT00000004928 description:"snap_masked-LSalAtl2s259-processed-gene-3.3")

HSP 1 Score: 112.464 bits (280), Expect = 3.664e-33
Identity = 50/75 (66.67%), Postives = 66/75 (88.00%), Query Frame = 0
Query:   62 KKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKAS 136
            KKVRT+VHFK P+T+RP R PK+PRK+  + N +DA+NI+KHPLT+ES MKKIE+NNTLVFI NI+ANK+Q+K++
Sbjct:    6 KKVRTTVHFKAPRTYRPTRDPKYPRKSTVKWNHIDAHNIVKHPLTSESPMKKIENNNTLVFITNIRANKYQLKST 80          
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|166987258|sp|A6VHD4.1|RL23_METM7 (RecName: Full=50S ribosomal protein L23)

HSP 1 Score: 87.4261 bits (215), Expect = 7.058e-22
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0
Query:   95 MDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGI 179
            MDA+++IK P+ +E  MK IE+ N LVF    KA K  I+A++K+L+D  VA +NT I P G+KKAY+ L S+Y+A +VA  +GI
Sbjct:    1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADIRAAIKELFDAEVADINTSITPKGKKKAYITLKSEYNAGEVAASLGI 85          
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|132802|sp|P10143.1|RL23_METVS (RecName: Full=50S ribosomal protein L23; AltName: Full=ML7)

HSP 1 Score: 86.6557 bits (213), Expect = 1.519e-21
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0
Query:   95 MDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGI 179
            MDA+++IK P+ +E  MK IE+ N LVF    KA K  IK ++K+L++  VA+VNT I P GQKKAY++L  +Y+A +VA  +GI
Sbjct:    1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKEDIKEAIKQLFNAEVAEVNTNITPKGQKKAYIKLKDEYNAGEVAASLGI 85          
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|166987257|sp|A4FVY0.1|RL23_METM5 (RecName: Full=50S ribosomal protein L23)

HSP 1 Score: 85.8853 bits (211), Expect = 2.496e-21
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 0
Query:   95 MDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGI 179
            MDA+++IK P+ +E  MK IE+ N LVF    KA K  I+A++K+L+D  VA +NT I P G+KKAY+ L ++Y+A +VA  +GI
Sbjct:    1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADIRAAIKELFDAEVADINTSITPKGKKKAYITLKAEYNAGEVAASLGI 85          
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|226734828|sp|A9A9B6.1|RL23_METM6 (RecName: Full=50S ribosomal protein L23)

HSP 1 Score: 85.1149 bits (209), Expect = 5.198e-21
Identity = 41/85 (48.24%), Postives = 59/85 (69.41%), Query Frame = 0
Query:   95 MDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGI 179
            MDA+++IK P+ +E  MK IE+ N LVF    KA K  I A++K+L+D  VA +NT I P G+KKAY+ L ++Y+A +VA  +GI
Sbjct:    1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADISAAIKELFDAEVADINTSITPKGKKKAYITLKAEYNAGEVAASLGI 85          
BLAST of 60s ribosomal protein l23a vs. SwissProt
Match: gi|74553574|sp|Q6LX09.1|RL23_METMP (RecName: Full=50S ribosomal protein L23)

HSP 1 Score: 84.3445 bits (207), Expect = 9.821e-21
Identity = 40/85 (47.06%), Postives = 59/85 (69.41%), Query Frame = 0
Query:   95 MDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGI 179
            MDA+++IK P+ +E  MK IE+ N LVF    KA K  ++A++K+L+D  VA +NT I P G+KKAY+ L  +Y+A +VA  +GI
Sbjct:    1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADVRAAIKELFDAEVADINTSITPKGKKKAYITLKDEYNAGEVAASLGI 85          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|1325282909|ref|XP_023326153.1| (60S ribosomal protein L23a-like [Eurytemora affinis])

HSP 1 Score: 269.626 bits (688), Expect = 7.166e-90
Identity = 137/169 (81.07%), Postives = 151/169 (89.35%), Query Frame = 0
Query:   12 KGKKPVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            KG KP PKK AEKKA D+  +   KAPV++V KA+++QKKVVKG HGTRVKKVRTSV F RPKTFR  R PK+PRK+ PRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFIC+IKANKHQ+KA+VKKLYDINV+KVNTL+RPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:   18 KGSKPAPKKVAEKKAGDEGTE---KAPVKAVIKARRMQKKVVKGLHGTRVKKVRTSVKFYRPKTFRCPRAPKYPRKSTPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICDIKANKHQVKAAVKKLYDINVSKVNTLVRPDGQKKAYVRLAPDYDALDVANKIGII 183          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|961375772|gb|ALS04630.1| (60S ribosomal protein L23a [Pseudodiaptomus poplesia] >gi|961375774|gb|ALS04631.1| 60S ribosomal protein L23a [Pseudodiaptomus poplesia] >gi|1148369164|gb|AQS22818.1| 60S ribosomal protein l23a [Pseudodiaptomus poplesia])

HSP 1 Score: 266.929 bits (681), Expect = 7.218e-89
Identity = 141/185 (76.22%), Postives = 154/185 (83.24%), Query Frame = 0
Query:    1 MAPKK-----DVEAPPKGKKPVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            MAPKK     D     KG KP PKK +EKKA+DK     +KAP ++V KA K QK+VVKG HGTRVKKVRTSV F RPKTFRP R PK+PRK+ PRRNRMDAY+IIKHPLTTESAMKKIEDNNTLVFI +IKANKHQIKA+V KLYDI+V+KVNTLIRPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:    1 MAPKKPAASKDAPKAAKGAKPAPKKVSEKKADDK----GEKAPPKAVTKALKTQKRVVKGVHGTRVKKVRTSVKFYRPKTFRPQRTPKYPRKSTPRRNRMDAYSIIKHPLTTESAMKKIEDNNTLVFITDIKANKHQIKAAVGKLYDISVSKVNTLIRPDGQKKAYVRLAPDYDALDVANKIGII 181          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|225718482|gb|ACO15087.1| (60S ribosomal protein L23a [Caligus clemensi])

HSP 1 Score: 262.307 bits (669), Expect = 6.678e-87
Identity = 135/183 (73.77%), Postives = 155/183 (84.70%), Query Frame = 0
Query:    1 MAPKKDVEAP-PKGKKPVPKKTAEKKAED--KEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            M P+K  E      KKPVPKK          K A P KKAPV++VQKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+  +RNRMDA+NIIKHPLTTESAMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+VAKVNTLIRPDGQKKAYV+LA DYDALDVANKIGII
Sbjct:    1 MGPRKQPEGGKDTSKKPVPKKVGAPAGATVPKAAVPVKKAPVKAVQKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPARDPKYPRKSTAKRNRMDAHNIIKHPLTTESAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVAKVNTLIRPDGQKKAYVKLAPDYDALDVANKIGII 183          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|961376920|gb|ALS05204.1| (60S ribosomal protein L23a [Tortanus dextrilobatus])

HSP 1 Score: 258.455 bits (659), Expect = 1.764e-85
Identity = 132/169 (78.11%), Postives = 145/169 (85.80%), Query Frame = 0
Query:   12 KGKKPVPKKTAEKKAEDKEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            K  KP PKK  EKK     A  A+KAP +++ KAQ+VQKKVVKG HGTRVKKVRTSV F RPKTFR  R PK+PRK+ PRRNRMDAY IIKHPLTTESAMKKIEDNNTLVFIC+IKANKHQ +++VKKLYDINV+KVNTL+RPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:   17 KAAKPAPKKVVEKK----PAGDAEKAPAKALTKAQRVQKKVVKGLHGTRVKKVRTSVKFYRPKTFRAPRTPKYPRKSTPRRNRMDAYAIIKHPLTTESAMKKIEDNNTLVFICDIKANKHQARSAVKKLYDINVSKVNTLVRPDGQKKAYVRLAPDYDALDVANKIGII 181          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|559372985|gb|AHB12470.1| (60S Ribosomal Protein L23A [Pantala flavescens])

HSP 1 Score: 246.128 bits (627), Expect = 7.317e-80
Identity = 123/160 (76.88%), Postives = 138/160 (86.25%), Query Frame = 0
Query:   30 EAKPAKKAPVRS---------VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            EAKP K AP            VQ+A+K+QKKV+KG HGTRV+K+RTSV F+RPKTFRP RQPK+PRK++PRRNRMDAYNIIK PLTTE+AMKKIEDNNTLVFI + KANKH IKA+VKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII
Sbjct:   77 EAKPKKDAPKTPKSAKTTKAVVQRAKKIQKKVIKGVHGTRVRKIRTSVQFRRPKTFRPPRQPKYPRKSVPRRNRMDAYNIIKFPLTTEAAMKKIEDNNTLVFIVHTKANKHHIKAAVKKLYDIDVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 236          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|225714192|gb|ACO12942.1| (60S ribosomal protein L23a [Lepeophtheirus salmonis] >gi|290462641|gb|ADD24368.1| 60S ribosomal protein L23a [Lepeophtheirus salmonis] >gi|290561152|gb|ADD37978.1| 60S ribosomal protein L23a [Lepeophtheirus salmonis])

HSP 1 Score: 244.202 bits (622), Expect = 9.048e-80
Identity = 130/187 (69.52%), Postives = 149/187 (79.68%), Query Frame = 0
Query:    1 MAPKKDVEAPPKGKKPVPKKTAEKKAEDKEAKPAKKAPVRSV-------QKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            M P+K  E     KKPVPKK A   A    A    KA            QKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+  +RNRMDA+NIIKHPLTTESAMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+V+KVNTLIRPDGQKKAYV+LA DYDALDVANKIGII
Sbjct:    1 MGPRKQPEGKDSAKKPVPKKVAPAAASSGTAAAVPKAAAPVKKAPVKAVQKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPTRDPKYPRKSTAKRNRMDAHNIIKHPLTTESAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVSKVNTLIRPDGQKKAYVKLAPDYDALDVANKIGII 187          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|225713790|gb|ACO12741.1| (60S ribosomal protein L23a [Lepeophtheirus salmonis])

HSP 1 Score: 241.121 bits (614), Expect = 1.397e-78
Identity = 129/187 (68.98%), Postives = 148/187 (79.14%), Query Frame = 0
Query:    1 MAPKKDVEAPPKGKKPVPKKTAEKKAEDKEAKPAKKAPVRSV-------QKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            M P+K  E     KKPVPKK A   A    A    KA            QKA+K+QKKVVKGTHGTRVKKVRT+VHFKRP+T+RP R PK+PRK+  +RNRMDA+NIIKHPLTTE AMKKIEDNNTLVFI N++ANK+QIK++VKKLY+I+V+KVNTLIRPDGQKKAYV+LA DYDALDVANKIGII
Sbjct:    1 MGPRKQPEGKDSAKKPVPKKVAPAAASSGTAAAVPKAAAPVKKAPVKAVQKARKIQKKVVKGTHGTRVKKVRTTVHFKRPRTYRPTRDPKYPRKSTAKRNRMDAHNIIKHPLTTEPAMKKIEDNNTLVFITNVRANKYQIKSAVKKLYEISVSKVNTLIRPDGQKKAYVKLAPDYDALDVANKIGII 187          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|961374844|gb|ALS04166.1| (60S ribosomal protein L23a [Acartia pacifica] >gi|961374848|gb|ALS04168.1| 60S ribosomal protein L23a [Acartia pacifica])

HSP 1 Score: 239.965 bits (611), Expect = 3.015e-78
Identity = 117/139 (84.17%), Postives = 128/139 (92.09%), Query Frame = 0
Query:   42 VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            V KA K +KKVVKG HGTRVKKVRTSV F RPKTF+P R PK+PRK+ P+RN+MDAY IIKHPLTTESAMKKIEDNNTLVFIC+IKANKHQ++A+VKKLYDINVAKVNTL+RPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:   35 VSKALKTKKKVVKGLHGTRVKKVRTSVKFYRPKTFKPPRNPKYPRKSTPKRNKMDAYAIIKHPLTTESAMKKIEDNNTLVFICDIKANKHQVRAAVKKLYDINVAKVNTLVRPDGQKKAYVRLAPDYDALDVANKIGII 173          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|961374846|gb|ALS04167.1| (60S ribosomal protein L23a [Acartia pacifica])

HSP 1 Score: 238.81 bits (608), Expect = 8.079e-78
Identity = 116/139 (83.45%), Postives = 128/139 (92.09%), Query Frame = 0
Query:   42 VQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            V KA K +KKVVKG HGTRVKKVRTSV F RPKTF+P R PK+PRK+ P+RN+MDAY II+HPLTTESAMKKIEDNNTLVFIC+IKANKHQ++A+VKKLYDINVAKVNTL+RPDGQKKAYVRLA DYDALDVANKIGII
Sbjct:   35 VSKALKTKKKVVKGLHGTRVKKVRTSVKFYRPKTFKPPRNPKYPRKSTPKRNKMDAYAIIRHPLTTESAMKKIEDNNTLVFICDIKANKHQVRAAVKKLYDINVAKVNTLVRPDGQKKAYVRLAPDYDALDVANKIGII 173          
BLAST of 60s ribosomal protein l23a vs. nr
Match: gi|817068423|ref|XP_012256148.1| (60S ribosomal protein L23a [Athalia rosae])

HSP 1 Score: 239.965 bits (611), Expect = 1.996e-77
Identity = 117/152 (76.97%), Postives = 135/152 (88.82%), Query Frame = 0
Query:   29 KEAKPAKKAPVRSVQKAQKVQKKVVKGTHGTRVKKVRTSVHFKRPKTFRPVRQPKFPRKAIPRRNRMDAYNIIKHPLTTESAMKKIEDNNTLVFICNIKANKHQIKASVKKLYDINVAKVNTLIRPDGQKKAYVRLASDYDALDVANKIGII 180
            K+A    KAP + VQKA K QKK++KG HG+RV+K+RTSVHF RPKTFRP R PK+PRK++P RNRMDA+NIIK+PLTTE+AMKKIEDNNTLVFI + +ANK+ IKASVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGII
Sbjct:   81 KKAPKGGKAPSKPVQKALKAQKKILKGVHGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAFNIIKYPLTTEAAMKKIEDNNTLVFIVHTRANKYHIKASVKKLYDIDVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 232          
The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l23a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000068261.007e-7074.64supercontig:LSalAtl2s:LSalAtl2s384:78188:79034:-1 ... [more]
EMLSAG000000049283.664e-3366.67supercontig:LSalAtl2s:LSalAtl2s259:302906:313875:1... [more]
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BLAST of 60s ribosomal protein l23a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|166987258|sp|A6VHD4.1|RL23_METM77.058e-2249.41RecName: Full=50S ribosomal protein L23[more]
gi|132802|sp|P10143.1|RL23_METVS1.519e-2149.41RecName: Full=50S ribosomal protein L23; AltName: ... [more]
gi|166987257|sp|A4FVY0.1|RL23_METM52.496e-2148.24RecName: Full=50S ribosomal protein L23[more]
gi|226734828|sp|A9A9B6.1|RL23_METM65.198e-2148.24RecName: Full=50S ribosomal protein L23[more]
gi|74553574|sp|Q6LX09.1|RL23_METMP9.821e-2147.06RecName: Full=50S ribosomal protein L23[more]

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BLAST of 60s ribosomal protein l23a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325282909|ref|XP_023326153.1|7.166e-9081.0760S ribosomal protein L23a-like [Eurytemora affini... [more]
gi|961375772|gb|ALS04630.1|7.218e-8976.2260S ribosomal protein L23a [Pseudodiaptomus poples... [more]
gi|225718482|gb|ACO15087.1|6.678e-8773.7760S ribosomal protein L23a [Caligus clemensi][more]
gi|961376920|gb|ALS05204.1|1.764e-8578.1160S ribosomal protein L23a [Tortanus dextrilobatus... [more]
gi|559372985|gb|AHB12470.1|7.317e-8076.8860S Ribosomal Protein L23A [Pantala flavescens][more]
gi|225714192|gb|ACO12942.1|9.048e-8069.5260S ribosomal protein L23a [Lepeophtheirus salmoni... [more]
gi|225713790|gb|ACO12741.1|1.397e-7868.9860S ribosomal protein L23a [Lepeophtheirus salmoni... [more]
gi|961374844|gb|ALS04166.1|3.015e-7884.1760S ribosomal protein L23a [Acartia pacifica] >gi|... [more]
gi|961374846|gb|ALS04167.1|8.079e-7883.4560S ribosomal protein L23a [Acartia pacifica][more]
gi|817068423|ref|XP_012256148.1|1.996e-7776.9760S ribosomal protein L23a [Athalia rosae][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold245_size240363supercontigscaffold245_size240363:113591..115346 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold245_size240363-snap-gene-1.26-mRNA-1maker-scaffold245_size240363-snap-gene-1.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold245_size240363:113591..115346-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold245_size240363-snap-gene-1.26 ID=maker-scaffold245_size240363-snap-gene-1.26|Name=60s ribosomal protein l23a|organism=Tigriopus kingsejongensis|type=gene|length=1756bp|location=Sequence derived from alignment at scaffold245_size240363:113591..115346- (Tigriopus kingsejongensis)
AATGACCTCACGCAACTTCGCTCTCCCTCTTCCTCTTTTCTATCAACATG GCACCGAAGAAGGACGTCGAAGGTAAGCGCTGAGCTGTCTAACACTCGAT CCGGAGCCGGACTCGAGGCATGAACCTGCCCAAAGTGGTCCGCCGACTGG ATCAGGGTTGGCCCATGCACCCCCCCGACATGGGGGTGGCTCAATGTCTC CGGTCTGGACTCGCGTCCAGCTCGGAGGCAGCGACCGAGCCATCGGATCC GGCCAATCCGAATATATCTGAGCCATCCCGACGATTGGGGCGAAGAAGGG ATCGGCATGACGGCTACGACGGGCATACCTGACCATCTCCGGTTTCTCCG ATAGCTCCGCCCAAGGGCAAGAAGCCCGTGCCCAAGAAGACCGCCGAGAA GAAGGCTGAGGACAAGGAGGCCAAACCGGCCAAGAAAGCCCCCGTCCGAT CGGTGCAGAAGGCCCAGAAGGTCCAGAAGAAGGTGGTCAAGGGCACCCAT GGCACTCGCGTCAAGAAAGTCCGCACTTCGGTGCACTTCAAGCGACCCAA GACCTTCCGTCCGGTCCGTCAGCCCAAGTTCCCCCGCAAGGCGATTCCTC GACGAAATCGGTAAGAATCGCCTCCCAGCGAAGGGCTAGAAACACATTCT GCCCTTGGAAATCGGGCGATTATGAGGACTGGGGATTTTAGGCTAGATCT GGTTCCCCGGAAGTGGTTCGTGTACTGCCCACGTTTCCGAAGGGGATAAG GTAGGGGATGGCGGTCGTGGGCCGAAGGGGTTTCGTAGACTAGCCCTGCG GCTAGGCTTACTTGAGCGAAGTTGATATACTGTAAGGGCCAGGTTTGGTC GGGTTGGATGTTCGAACTGTTTGGGCGCACGACCGCCAGCCCCTCCTACC TTTACCTCCGCAGGATCGTACCCTGATCCCCACGGTTACCTTTTCCGGTC TTACGAGGCGGCCATGGGTCTTGAACCTAATACCTAGAGCAAAGATGGCC GACTCTTTACCACGTGGTGTCTTTAACTTCTTGGACTTTGGGATCCAGTG AAGCCAATCCTGCCTGCTTAGATCACTTGATCCAGGTCGAGACCGCGATG TGATGGCGGGGGCCGATGGTCTGTCATCCGGGGTGTCTGCACGATGAGGT GGTATTTTGACCACCGGGATGATCCAGGGCACGTTCCTTAGCAGTGGGTA TCCATGGAACGCGTTTCTTTTTCAGCATGGATGCTTACAACATCATCAAG CACCCCCTGACGACTGAGTCGGCGATGAAGAAGATCGAGGACAACAACAC GTTGGTCTTCATCTGCAACATCAAAGCCAACAAGCACCAAATCAAGGCCT CGGTCAAGAAGCTGTATGATATCAACGTGGCCAAGGTCAACACCCTCATC AGGTAACTATTGGCCCGCGACCGGCAACTCAAGACCAATCCTTGACATGA TGATAAACCTCGGATCCAATTTCTGACCCAATTGATGACACACCGTAGCT GTTCACACTCTGACGCCATTGGCCATGTTCCACTTGGCTGCCACCCCCTT GACTGGCTTGGATTAACCACCCCGGTTTTCTTTCTCCTTGCAGGCCCGAT GGACAGAAGAAGGCTTACGTGCGATTGGCTTCCGACTACGACGCTCTGGA TGTGGCCAACAAGATCGGAATCATATAAATTCCCCCACAACACGCCTTTC CCATGTTGCTCAGAGTGATACCTTCCGACTGTTGGAAATAAATTCTGGGA TAAAAT
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Synonyms
The feature '60s ribosomal protein l23a' has the following synonyms
Synonym
Tk06011
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