Cyclin-C, maker-scaffold2471_size15358-snap-gene-0.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000000139 (supercontig:LSalAtl2s:LSalAtl2s1021:54890:58082:-1 gene:EMLSAG00000000139 transcript:EMLSAT00000000139 description:"maker-LSalAtl2s1021-augustus-gene-0.33") HSP 1 Score: 283.108 bits (723), Expect = 1.404e-93 Identity = 131/178 (73.60%), Postives = 154/178 (86.52%), Query Frame = 0 Query: 79 KCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILA 255 +C+DPLLL+PT+IFLASKVEEFGVISNTRLINTC+TVIKNKF+YAYPNQDFPYRANNILECEFYLLEN+DCC+VVF PYRPLVQ+ QDL +E+ +L AWR+VNDSLRTDV LL+PPY IALA +H+AC D WF LNVDL+K+Q+I K+I+NLYEL K+F+EKKEM IL Sbjct: 275 QCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILG 452
BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000000197 (supercontig:LSalAtl2s:LSalAtl2s1029:207469:226371:-1 gene:EMLSAG00000000197 transcript:EMLSAT00000000197 description:"maker-LSalAtl2s1029-snap-gene-1.52") HSP 1 Score: 83.5741 bits (205), Expect = 1.671e-18 Identity = 62/226 (27.43%), Postives = 114/226 (50.44%), Query Frame = 0 Query: 46 NFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEE--------FGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLE---DILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGV---DAKSWFAELNVDLDKIQEICKFILNLYELWKSFE-EKKEMSSILAK 256 + IQ G+ L+L Q +AT V +RFY S+ ++A + LASK+EE V ++ + + ++ +Q++ N +++ E +L+ + C+ V P++ +V Y + L L+ ++L +W +NDSLRTD+ + +PP +A ACI+++ V +WF L V+ D I++ C ++ LY K + E ++M +L K Sbjct: 59 DLIQLAGKLLRLPQVAMATGCVLLQRFYYAKSIVYYPFDIVAMAXLVLASKIEEXPRRIRDIINVFTHIKQVRNSQPIVPVSL-----DQNYVNLKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLKWLELDTNKELLQMSWNFMNDSLRTDIFVRYPPECVATACIYLSARKLKVPLPKNPAWFDCLGVEEDDIKDCCYRMICLYNRKKPNQLELEKMLDVLRK 279
BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000001699 (supercontig:LSalAtl2s:LSalAtl2s1294:14773:20030:-1 gene:EMLSAG00000001699 transcript:EMLSAT00000001699 description:"maker-LSalAtl2s1294-augustus-gene-0.35") HSP 1 Score: 75.0998 bits (183), Expect = 1.107e-15 Identity = 60/227 (26.43%), Postives = 103/227 (45.37%), Query Frame = 0 Query: 33 SEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANN----ILECEFYLLENMDCCLVVFQPYRPLVQYCQ-----DLGLEDILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAE------------LNVDLDKIQEICKFILNLY 238 SE Y++ + FI LG+ L LR +A+A V+F RFY + ++ +FLA K EE C +++ + Q F N+ I+ E LL+ + L V PY L++Y + ++ L+ ++ +W VNDSL T + L + P IA+A +++A + K W ++D+D +++IC +L+LY Sbjct: 25 SESRYRREGV---RFIMELGKALNLRHDTMASAAVYFHRFYMIQCFQDFPKFVVGTCCLFLAGKAEETP--------KKCRDIVRTVRSLTNXRQ-FSTFGNDPREEIMIIERVLLQTIKFDLQVDHPYTSLLKYAKCLKGDNVKLQKMVQMSWTFVNDSLCTPLCLQWEPEVIAIALMYLAAKLSKFEVKEWAGRQSWHKHWWDQYVQDLDVDILEDICHQVLDLY 239
BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000012186 (supercontig:LSalAtl2s:LSalAtl2s87:623663:624424:1 gene:EMLSAG00000012186 transcript:EMLSAT00000012186 description:"augustus_masked-LSalAtl2s87-processed-gene-5.4") HSP 1 Score: 54.6842 bits (130), Expect = 4.339e-9 Identity = 68/242 (28.10%), Postives = 107/242 (44.21%), Query Frame = 0 Query: 36 EYQKVIIFFA--NFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCV-DPLLLAPTSIFLASKVEEFGVISNTRLINTC-STVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-----------ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKS------WFAELN--VDLDKIQEICKFILNLYELWKSFEEKKEMSSIL 254 EY K + F F+ ++L+L ATA F FY + K V DP L+A I+LA KVE+ + +IN +T+ K ++ ++ F +R + E LL +D + P++ L+ Y + L+D I AW L+ D L P ++AL+CI++ G+ W L+ VD+D I EIC I+++Y KKE+ IL Sbjct: 18 EYGKSVHPFVVCRFVFECCKKLELDVLSTATAITLFHSFYKSSRKKEVYDPYLIAGACIYLAGKVEDETEMRLRDVINVVHATLHPCKEPLSHDSEYFMHREALVEA-ELLLLRVLDFKVKFTHPHKYLLHYLK--TLKDWIPIQTWSNFPIASTAWSLLQDFYHDPFLLECGPSKVALSCIYLTFKIFGLSVDHAMREDIWIKILDEAVDMDDISEICSRIMDVY--------KKEIKYIL 248
BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000004351 (supercontig:LSalAtl2s:LSalAtl2s229:214329:219598:-1 gene:EMLSAG00000004351 transcript:EMLSAT00000004351 description:"maker-LSalAtl2s229-snap-gene-2.40") HSP 1 Score: 50.0618 bits (118), Expect = 3.585e-7 Identity = 58/229 (25.33%), Postives = 106/229 (46.29%), Query Frame = 0 Query: 45 ANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYP-----NQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDL-GLEDILGAAWRLVNDSLR-TDVSLLFPPYQIALACIHMAC---------TAKGVDAKSWF--AELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILA 255 ANFIQ +G++L + Q I TA V+ +RFY +S +A ++FLA+K EE R + V P ++ + +A ++ E LL+ + + + P+ +V+ CQ + +D+ ++ + +SL T + L P +A CIH+AC +++G K WF + N L+ + ++ L +++ S +KK M+ A Sbjct: 78 ANFIQDMGQRLHVPQLCINTAIVYMQRFYMFHSFTRFHRNTIAAAALFLAAKXEE-----QPRKLEHVIKVAHICLHREQPPLDTRSEQYIEQAQELVTNENILLQTLGFDVAIDHPHTHVVRCCQLVKASKDLAQTSYFMATNSLHLTTMCLRHTPTIVACVCIHLACKWTNYKIPLSSRG---KEWFLYVDPNTSLELLNKLTDEFLTIFDRCPSRLKKKIMAXAQA 298
BLAST of Cyclin-C vs. SwissProt
Match: gi|74921277|sp|Q7QB13.2|CCNC_ANOGA (RecName: Full=Cyclin-C) HSP 1 Score: 405.986 bits (1042), Expect = 1.977e-143 Identity = 190/265 (71.70%), Postives = 226/265 (85.28%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264 MAGNFWQSSH QWILDK DL+RER D + LSEEEYQK+ +FFAN IQ LGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT I L+SKVEEFGVISN+RLI TC TVIKNKF+YAY Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q QD+G E+ +L WRL+NDSLRTDVSLL+PPYQIA+ C+ +AC + KSWFAELNVD+DK+QEI + I+NL+ELWK ++EKKE+ ++L KMPKPK P Sbjct: 1 MAGNFWQSSHHQQWILDKQDLIRERQHDLKTLSEEEYQKLFMFFANIIQVLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTCILLSSKVEEFGVISNSRLITTCQTVIKNKFSYAY-QQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLMQDIGQEEQLLTLTWRLINDSLRTDVSLLYPPYQIAIGCLQIACVILQKELKSWFAELNVDMDKVQEIARAIVNLFELWKGYDEKKEIQALLEKMPKPKPHP 264
BLAST of Cyclin-C vs. SwissProt
Match: gi|122104845|sp|Q16JA2.1|CCNC_AEDAE (RecName: Full=Cyclin-C) HSP 1 Score: 399.823 bits (1026), Expect = 5.376e-141 Identity = 189/265 (71.32%), Postives = 225/265 (84.91%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264 MAGNFWQSSH QWILDK DL+RER D + L+EEEYQK+ +FFAN IQ LGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT I LASKVEEFGVISN+RLI TC TVIKNKF+YAY Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q QD+G ED +L WRL+NDSLRTDVSLL+PPYQIA+ C+ +AC + K+WFAELNVD++K+QEI + ILN++ELWKS++E KE+ +L KMPKPK P Sbjct: 1 MAGNFWQSSHHQQWILDKQDLIRERQHDLKNLTEEEYQKIFMFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTCILLASKVEEFGVISNSRLITTCQTVIKNKFSYAY-QQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLIQDIGQEDQLLTLTWRLINDSLRTDVSLLYPPYQIAIGCLQIACVILQKELKAWFAELNVDMEKVQEIARAILNVFELWKSYDE-KEIQGLLEKMPKPKPAP 263
BLAST of Cyclin-C vs. SwissProt
Match: gi|116150|sp|P25008.1|CCNC_DROME (RecName: Full=Cyclin-C) HSP 1 Score: 379.022 bits (972), Expect = 9.125e-133 Identity = 184/259 (71.04%), Postives = 217/259 (83.78%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDA-KSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKM 257 MAGNFWQSSH QWILDK DLLRER D L+E+EYQKV IFFAN IQ LGEQLKLRQQVIATATV+FKRFY++NSLK +DPLLLAPT I LASKVEEFGVISN+RLI+ C + IK KF+YAY Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q QD+G ED +L +WR+VNDSLRTDV LL+PPYQIA+AC+ +AC DA K WFAELNVDLDK+QEI + I+NLYELWK ++EK E+ +L+K+ Sbjct: 1 MAGNFWQSSHSQQWILDKPDLLRERQHDLLALNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYAYA-QEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQKDATKQWFAELNVDLDKVQEIVRAIVNLYELWKDWKEKDEIQMLLSKI 258
BLAST of Cyclin-C vs. SwissProt
Match: gi|122098058|sp|Q29AI1.1|CCNC_DROPS (RecName: Full=Cyclin-C) HSP 1 Score: 378.252 bits (970), Expect = 2.167e-132 Identity = 182/259 (70.27%), Postives = 217/259 (83.78%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDA-KSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKM 257 MAGNFWQSSH QWILDK DLLRER D L+E+EYQKV IFFAN IQ LGEQLKLRQQVIATATV+FKRFY++NSLK +DPLLLAPT I LASKVEEFGVISN+RLI+ C + IK KF+YAY Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q QD+G ED +L +WR+VNDSLRTDV LL+PPYQIA+AC+ +AC D+ K WFAELNVDLDK+QEI + I+NLYE+WK ++EK E+ +L+K+ Sbjct: 1 MAGNFWQSSHSQQWILDKQDLLRERQHDLLSLNEDEYQKVFIFFANVIQVLGEQLKLRQQVIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKFSYAY-TQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQKDSTKQWFAELNVDLDKVQEIVRAIVNLYEMWKDWKEKDEIQMLLSKI 258
BLAST of Cyclin-C vs. SwissProt
Match: gi|1705767|sp|P55168.1|CCNC_CHICK (RecName: Full=Cyclin-C) HSP 1 Score: 374.785 bits (961), Expect = 1.059e-130 Identity = 180/270 (66.67%), Postives = 228/270 (84.44%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPPPNQGQ 269 MAGNFWQSSH QWILDK DLL+ER D +FLSEEEY K+ IFF N IQ LGE LKLRQQVIATATV+FKRFY++ SLK +DP+L+APT +FLASKVEEFGV+SNTRLI+ ++V+K +F+YA+P ++FPYR N+ILECEFYLLE MDCCL+V+ PYRPL+QY QD+G ED +L AWR+VND+ RTD+ LL+PP+ IALAC+H+AC + DA+ WFAEL+VD++KI EI + IL LYE WK+F+E+KEM++IL+KMPKPK PP ++G+ Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGE 269
BLAST of Cyclin-C vs. SwissProt
Match: gi|123918090|sp|Q4KLA0.1|CCNC_XENLA (RecName: Full=Cyclin-C) HSP 1 Score: 374.4 bits (960), Expect = 1.471e-130 Identity = 181/270 (67.04%), Postives = 227/270 (84.07%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPPPNQGQ 269 MAGNFWQSSH QWILDK DLL+ER D +FLSEEEY K+ IFF N IQ LGE LKLRQQVIATATV+FKRFY++ SLK +DP+L+APT +FLASKVEEFGV+SNTRLI+ ++V+K +F+YA+P ++FPYR N+ILECEFYLLE MDCCL+V+ PYRPL+QY QD+G ED +L AWR+VND+ RTD+ LL+PP+ IALAC+H+AC + DA+ WFAEL+VD++KI EI + IL LYE WK+F+E+KEM+SIL+KMPKPK PP + G+ Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMASILSKMPKPKPPPNSDGE 269
BLAST of Cyclin-C vs. SwissProt
Match: gi|408360330|sp|Q62447.4|CCNC_MOUSE (RecName: Full=Cyclin-C) HSP 1 Score: 374.015 bits (959), Expect = 1.976e-130 Identity = 180/270 (66.67%), Postives = 227/270 (84.07%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLEDI-LGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPPPNQGQ 269 MAGNFWQSSH QWILDK DLL+ER D +FLSEEEY K+ IFF N IQ LGE LKLRQQVIATATV+FKRFY++ SLK +DP+L+APT +FLASKVEEFGV+SNTRLI ++V+K +F+YA+P ++FPYR N+ILECEFYLLE MDCCL+V+ PYRPL+QY QD+G ED+ L AWR+VND+ RTD+ LL+PP+ IALAC+H+AC + DA+ WFAEL+VD++KI EI + IL LYE WK+F+E+KEM++IL+KMPKPK PP ++G+ Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVLKTRFSYAFP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDVLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGE 269
BLAST of Cyclin-C vs. SwissProt
Match: gi|166214910|sp|P24863.2|CCNC_HUMAN (RecName: Full=Cyclin-C; AltName: Full=SRB11 homolog; Short=hSRB11) HSP 1 Score: 373.629 bits (958), Expect = 2.181e-130 Identity = 180/270 (66.67%), Postives = 227/270 (84.07%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPPPNQGQ 269 MAGNFWQSSH QWILDK DLL+ER D +FLSEEEY K+ IFF N IQ LGE LKLRQQVIATATV+FKRFY++ SLK +DP+L+APT +FLASKVEEFGV+SNTRLI ++V+K +F+YA+P ++FPYR N+ILECEFYLLE MDCCL+V+ PYRPL+QY QD+G ED +L AWR+VND+ RTD+ LL+PP+ IALAC+H+AC + DA+ WFAEL+VD++KI EI + IL LYE WK+F+E+KEM++IL+KMPKPK PP ++G+ Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGE 269
BLAST of Cyclin-C vs. SwissProt
Match: gi|123915950|sp|Q28F72.1|CCNC_XENTR (RecName: Full=Cyclin-C) HSP 1 Score: 372.859 bits (956), Expect = 4.590e-130 Identity = 180/270 (66.67%), Postives = 227/270 (84.07%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPPPNQGQ 269 MAGNFWQSSH QWILDK DLL+ER D +FLSEEEY K+ IFF N IQ LGE LKLRQQVIATATV+FKRFY++ SLK +DP+L+APT +FLASKVEEFGV+SNTRLI+ ++V+K +F+YA+P ++FPYR N+ILECEFYLLE MDCCL+V+ PYRPL+QY QD+G ED +L AWR+VND+ RTD+ LL+PP+ IALAC+H+AC + DA+ WFAEL+VD++KI EI + IL LYE WK+F+E+KEM++IL KMPKPK PP ++G+ Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILNKMPKPKPPPNSEGE 269
BLAST of Cyclin-C vs. SwissProt
Match: gi|122146188|sp|Q3ZCK5.1|CCNC_BOVIN (RecName: Full=Cyclin-C) HSP 1 Score: 371.703 bits (953), Expect = 1.386e-129 Identity = 178/270 (65.93%), Postives = 227/270 (84.07%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPPPNQGQ 269 MAGNFWQSSH QWILDK DLL+ER D +FLSEEEY K+ IFF N IQ LGE LKLRQQVIATATV+FKRFY++ SLK +DP+L+APT +FLASKVEEFGV+SNTRLI ++V+K +F+YA+P ++FPY+ N++LECEFYLLE MDCCL+V+ PYRPL+QY QD+G ED +L AWR+VND+ RTD+ LL+PP+ IALAC+H+AC + DA+ WFAEL+VD++KI EI + IL LYE WK+F+E+KEM++IL+KMPKPK PP ++G+ Sbjct: 1 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFP-KEFPYKMNHVLECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGE 269
BLAST of Cyclin-C vs. nr
Match: gi|1080050942|ref|XP_018566947.1| (cyclin-C isoform X2 [Anoplophora glabripennis]) HSP 1 Score: 408.297 bits (1048), Expect = 1.039e-141 Identity = 189/265 (71.32%), Postives = 229/265 (86.42%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264 M+GNFWQSSH QW+LDK DL+RER D L E+EYQK+ IFF++ IQTLGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT +FLASKVEEFGVISN+RLI TC TVIKNKF YAY Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q QD+G E+ +L AWR+VNDSLRTDVSLL+PPYQIA+ C+ +AC D K+WFAELNVD++KIQEI ++I+NL+ELWK+++EKKE+ ++LAKMPKPK P Sbjct: 1 MSGNFWQSSHHQQWLLDKQDLIRERQHDLAILPEDEYQKIFIFFSSVIQTLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTCLFLASKVEEFGVISNSRLITTCQTVIKNKFGYAY-TQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDIGHEEQLLTLAWRIVNDSLRTDVSLLYPPYQIAIGCLQIACVILQKDHKAWFAELNVDIEKIQEIARYIINLFELWKTYDEKKEIQALLAKMPKPKPAP 264
BLAST of Cyclin-C vs. nr
Match: gi|1230284380|ref|XP_022180590.1| (cyclin-C [Myzus persicae]) HSP 1 Score: 407.912 bits (1047), Expect = 1.089e-141 Identity = 191/266 (71.80%), Postives = 227/266 (85.34%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED--ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264 MAGNFWQSSH QWILDK DL+RER D Q LSEEEYQK+ IFF+NFIQ LGEQLKL+QQVIATATV+FKRFY++NSLKC+DPLLL+PT +FLASKVEEFGVISN+RLI TC TV+KNK YAY Q+FPYR N+ILECEFYLLEN+DCCL+VFQPYRPL+Q QD+G + +L AWR+VNDSLRTD+SLL+PPYQIA+ C+ +AC D KSWFAELNVD+DKIQEI ++I+NL+ELWKS++EKK++ +L KMPKPK P Sbjct: 1 MAGNFWQSSHYQQWILDKQDLVRERQLDLQILSEEEYQKIGIFFSNFIQILGEQLKLKQQVIATATVYFKRFYARNSLKCIDPLLLSPTCVFLASKVEEFGVISNSRLITTCQTVLKNKLNYAY-TQEFPYRTNHILECEFYLLENLDCCLIVFQPYRPLLQLVQDIGQHEDQLLALAWRVVNDSLRTDLSLLYPPYQIAIGCLQIACVIMQKDLKSWFAELNVDIDKIQEISRYIINLFELWKSYDEKKDIQGLLNKMPKPKLQP 265
BLAST of Cyclin-C vs. nr
Match: gi|668444642|gb|KFB35315.1| (hypothetical protein ZHAS_00001570 [Anopheles sinensis]) HSP 1 Score: 407.912 bits (1047), Expect = 1.098e-141 Identity = 191/265 (72.08%), Postives = 225/265 (84.91%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264 MAGNFWQSSH QWILDK DL+RER D + LSEEEYQK+ +FFAN IQ LGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT I LASKVEEFGVISN+RLI TC TVIKNKF YAY Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q QD+G E+ +L WRL+NDSLRTDVSLL+PPYQIA+ C+ +AC + KSWFAELNVD+DK+QEI + I+NL+ELWK ++EKKE+ ++L KMPKPK P Sbjct: 1 MAGNFWQSSHHQQWILDKQDLIRERQHDMKALSEEEYQKIFMFFANIIQVLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTCILLASKVEEFGVISNSRLITTCQTVIKNKFGYAY-QQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLMQDIGQEEQLLTLTWRLINDSLRTDVSLLYPPYQIAIGCLQIACVILQKELKSWFAELNVDMDKVQEIARAIVNLFELWKGYDEKKEIQALLEKMPKPKPAP 264
BLAST of Cyclin-C vs. nr
Match: gi|926612978|ref|XP_013794767.1| (cyclin-C-like isoform X1 [Limulus polyphemus]) HSP 1 Score: 408.683 bits (1049), Expect = 1.261e-141 Identity = 194/277 (70.04%), Postives = 236/277 (85.20%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPK---SPPPNQGQMQQQ 273 MAGNFWQSSH QW+LD+ DL RERH+D Q L+EEEYQK++I+F+NFIQ LGEQLK++QQVIATATV+FKRFY +NSLKC+DPLL+APT IFLASKVEEFGVISN+RLI+TC TV+KNKF+YAYP Q+FPYR +++LECEF+LLE MDCCLV++ YRPLVQY D+G ED +L AW++VNDSLRTDV LL+PP+QIALAC+HMAC D K WFAELNVD++KI EI + ILNLY+LWK+F+EKKE+ ++LAKMPKPK S PP+QG Q Sbjct: 1 MAGNFWQSSHFQQWLLDRQDLQRERHSDLQVLTEEEYQKLMIYFSNFIQALGEQLKVKQQVIATATVYFKRFYVRNSLKCIDPLLMAPTCIFLASKVEEFGVISNSRLISTCQTVVKNKFSYAYP-QEFPYRISHVLECEFFLLEMMDCCLVLYHAYRPLVQYVHDIGPEDNLLHMAWKVVNDSLRTDVCLLYPPHQIALACLHMACVILQKDYKHWFAELNVDMEKILEITRQILNLYDLWKNFDEKKEIPALLAKMPKPKAQPSRPPSQGAGSSQ 276
BLAST of Cyclin-C vs. nr
Match: gi|1285015218|ref|XP_023019701.1| (cyclin-C [Leptinotarsa decemlineata]) HSP 1 Score: 407.912 bits (1047), Expect = 1.337e-141 Identity = 188/265 (70.94%), Postives = 227/265 (85.66%), Query Frame = 0 Query: 1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264 M+GNFWQSSH QW+LDK DL+RER D L EEEYQK+ IFF++ IQTLGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT IFL+SKVEEFGVISN RL+ TC TVIKNKF YAY Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q QD+G E+ +L AWR+VNDSLRTDVSLL+PPYQIA+ C+ +AC D K+WFAELNVD++KIQEI ++I+NL+ELWK+++EKKE+ +L+KMPKPK P Sbjct: 1 MSGNFWQSSHHQQWLLDKQDLIRERQHDLSILQEEEYQKIFIFFSSVIQTLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTCIFLSSKVEEFGVISNNRLVTTCQTVIKNKFGYAY-TQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDIGHEEQLLTLAWRIVNDSLRTDVSLLYPPYQIAIGCLQIACVILQKDHKAWFAELNVDIEKIQEIARYIINLFELWKTYDEKKEIQGLLSKMPKPKPAP 264 The following BLAST results are available for this feature:
BLAST of Cyclin-C vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of Cyclin-C vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of Cyclin-C vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2471_size15358:6075..8291+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold2471_size15358-snap-gene-0.6 ID=maker-scaffold2471_size15358-snap-gene-0.6|Name=Cyclin-C|organism=Tigriopus kingsejongensis|type=gene|length=2217bp|location=Sequence derived from alignment at scaffold2471_size15358:6075..8291+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'Cyclin-C' has the following synonyms
Add to Basket
|