Cyclin-C, maker-scaffold2471_size15358-snap-gene-0.6 (gene) Tigriopus kingsejongensis

Overview


Name	Cyclin-C
Unique Name	maker-scaffold2471_size15358-snap-gene-0.6
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000000139 (supercontig:LSalAtl2s:LSalAtl2s1021:54890:58082:-1 gene:EMLSAG00000000139 transcript:EMLSAT00000000139 description:"maker-LSalAtl2s1021-augustus-gene-0.33")

HSP 1 Score: 283.108 bits (723), Expect = 1.404e-93
Identity = 131/178 (73.60%), Postives = 154/178 (86.52%), Query Frame = 0

Query:   79 KCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILA 255
            +C+DPLLL+PT+IFLASKVEEFGVISNTRLINTC+TVIKNKF+YAYPNQDFPYRANNILECEFYLLEN+DCC+VVF PYRPLVQ+ QDL +E+ +L  AWR+VNDSLRTDV LL+PPY IALA +H+AC     D   WF  LNVDL+K+Q+I K+I+NLYEL K+F+EKKEM  IL 
Sbjct:  275 QCIDPLLLSPTAIFLASKVEEFGVISNTRLINTCTTVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCMVVFLPYRPLVQFSQDLNVEESVLPIAWRVVNDSLRTDVCLLYPPYLIALASLHIACVIMNKDCTQWFXXLNVDLEKVQDISKYIINLYELQKNFDEKKEMGGILG 452

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BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000000197 (supercontig:LSalAtl2s:LSalAtl2s1029:207469:226371:-1 gene:EMLSAG00000000197 transcript:EMLSAT00000000197 description:"maker-LSalAtl2s1029-snap-gene-1.52")

HSP 1 Score: 83.5741 bits (205), Expect = 1.671e-18
Identity = 62/226 (27.43%), Postives = 114/226 (50.44%), Query Frame = 0

Query:   46 NFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEE--------FGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLE---DILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGV---DAKSWFAELNVDLDKIQEICKFILNLYELWKSFE-EKKEMSSILAK 256
            + IQ  G+ L+L Q  +AT  V  +RFY   S+      ++A   + LASK+EE          V ++ + +     ++         +Q++    N +++ E  +L+ +  C+ V  P++ +V Y + L L+   ++L  +W  +NDSLRTD+ + +PP  +A ACI+++     V      +WF  L V+ D I++ C  ++ LY   K  + E ++M  +L K
Sbjct:   59 DLIQLAGKLLRLPQVAMATGCVLLQRFYYAKSIVYYPFDIVAMAXLVLASKIEEXPRRIRDIINVFTHIKQVRNSQPIVPVSL-----DQNYVNLKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLKWLELDTNKELLQMSWNFMNDSLRTDIFVRYPPECVATACIYLSARKLKVPLPKNPAWFDCLGVEEDDIKDCCYRMICLYNRKKPNQLELEKMLDVLRK 279

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BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000001699 (supercontig:LSalAtl2s:LSalAtl2s1294:14773:20030:-1 gene:EMLSAG00000001699 transcript:EMLSAT00000001699 description:"maker-LSalAtl2s1294-augustus-gene-0.35")

HSP 1 Score: 75.0998 bits (183), Expect = 1.107e-15
Identity = 60/227 (26.43%), Postives = 103/227 (45.37%), Query Frame = 0

Query:   33 SEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANN----ILECEFYLLENMDCCLVVFQPYRPLVQYCQ-----DLGLEDILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAE------------LNVDLDKIQEICKFILNLY 238
            SE  Y++  +    FI  LG+ L LR   +A+A V+F RFY     +     ++    +FLA K EE            C  +++   +     Q F    N+    I+  E  LL+ +   L V  PY  L++Y +     ++ L+ ++  +W  VNDSL T + L + P  IA+A +++A      + K W                ++D+D +++IC  +L+LY
Sbjct:   25 SESRYRREGV---RFIMELGKALNLRHDTMASAAVYFHRFYMIQCFQDFPKFVVGTCCLFLAGKAEETP--------KKCRDIVRTVRSLTNXRQ-FSTFGNDPREEIMIIERVLLQTIKFDLQVDHPYTSLLKYAKCLKGDNVKLQKMVQMSWTFVNDSLCTPLCLQWEPEVIAIALMYLAAKLSKFEVKEWAGRQSWHKHWWDQYVQDLDVDILEDICHQVLDLY 239

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BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000012186 (supercontig:LSalAtl2s:LSalAtl2s87:623663:624424:1 gene:EMLSAG00000012186 transcript:EMLSAT00000012186 description:"augustus_masked-LSalAtl2s87-processed-gene-5.4")

HSP 1 Score: 54.6842 bits (130), Expect = 4.339e-9
Identity = 68/242 (28.10%), Postives = 107/242 (44.21%), Query Frame = 0

Query:   36 EYQKVIIFFA--NFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCV-DPLLLAPTSIFLASKVEEFGVISNTRLINTC-STVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-----------ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKS------WFAELN--VDLDKIQEICKFILNLYELWKSFEEKKEMSSIL 254
            EY K +  F    F+    ++L+L     ATA   F  FY  +  K V DP L+A   I+LA KVE+   +    +IN   +T+   K   ++ ++ F +R   +   E  LL  +D  +    P++ L+ Y +   L+D           I   AW L+ D       L   P ++AL+CI++     G+          W   L+  VD+D I EIC  I+++Y        KKE+  IL
Sbjct:   18 EYGKSVHPFVVCRFVFECCKKLELDVLSTATAITLFHSFYKSSRKKEVYDPYLIAGACIYLAGKVEDETEMRLRDVINVVHATLHPCKEPLSHDSEYFMHREALVEA-ELLLLRVLDFKVKFTHPHKYLLHYLK--TLKDWIPIQTWSNFPIASTAWSLLQDFYHDPFLLECGPSKVALSCIYLTFKIFGLSVDHAMREDIWIKILDEAVDMDDISEICSRIMDVY--------KKEIKYIL 248

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BLAST of Cyclin-C vs. L. salmonis genes
Match: EMLSAG00000004351 (supercontig:LSalAtl2s:LSalAtl2s229:214329:219598:-1 gene:EMLSAG00000004351 transcript:EMLSAT00000004351 description:"maker-LSalAtl2s229-snap-gene-2.40")

HSP 1 Score: 50.0618 bits (118), Expect = 3.585e-7
Identity = 58/229 (25.33%), Postives = 106/229 (46.29%), Query Frame = 0

Query:   45 ANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYP-----NQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDL-GLEDILGAAWRLVNDSLR-TDVSLLFPPYQIALACIHMAC---------TAKGVDAKSWF--AELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILA 255
            ANFIQ +G++L + Q  I TA V+ +RFY  +S        +A  ++FLA+K EE       R +     V         P     ++ +  +A  ++  E  LL+ +   + +  P+  +V+ CQ +   +D+   ++ +  +SL  T + L   P  +A  CIH+AC         +++G   K WF   + N  L+ + ++    L +++   S  +KK M+   A
Sbjct:   78 ANFIQDMGQRLHVPQLCINTAIVYMQRFYMFHSFTRFHRNTIAAAALFLAAKXEE-----QPRKLEHVIKVAHICLHREQPPLDTRSEQYIEQAQELVTNENILLQTLGFDVAIDHPHTHVVRCCQLVKASKDLAQTSYFMATNSLHLTTMCLRHTPTIVACVCIHLACKWTNYKIPLSSRG---KEWFLYVDPNTSLELLNKLTDEFLTIFDRCPSRLKKKIMAXAQA 298

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BLAST of Cyclin-C vs. SwissProt
Match: gi|166214950|sp|P39947.2|CCNC_RAT (RecName: Full=Cyclin-C)

HSP 1 Score: 358.607 bits (919), Expect = 2.009e-124
Identity = 176/270 (65.19%), Postives = 221/270 (81.85%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLEDI-LGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPPPNQGQ 269
            MAGNFWQSSH  QWILDK     ER  D +FLSEEEY K+ IFF N IQ LGE LKLRQQVIATATV+FKRFY++ SLK +DP+L+APT +FLASKVEEFGV+SNT LI   ++V+K +F+YA P ++FPYR N+ILECEFYLLE MDCCL+V+ PYRPL+QY QD+G ED+ L  AWR+VND+ RTD+ LL+PP+ IALAC+H+AC  +  DA+ WFAEL+VD++KI EI + IL LYE WK+F+E+KEM++IL+KMPKPK PP ++G+
Sbjct:    1 MAGNFWQSSHYLQWILDK-----ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRFSYASP-KEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDVLLPLAWRIVNDTYRTDLCLLYPPFMIALACLHVACVVQQKDARQWFAELSVDMEKILEIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGE 264

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BLAST of Cyclin-C vs. SwissProt
Match: gi|75024894|sp|Q9TYP2.2|CCNC_CAEEL (RecName: Full=Cyclin-C)

HSP 1 Score: 206.453 bits (524), Expect = 2.385e-64
Identity = 108/286 (37.76%), Postives = 167/286 (58.39%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQ---------LKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDL---------------GLEDILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMA--CTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKP 260
            MA NFW+SSHC QWI DK ++ ++R  D +  +EEEY ++ IF+ANFI  +  +          KLRQQVIATA ++FKRFY + S + + P L+A T++FLA KVEE   +S +  +   + V+  ++   +       +   + + EF L+E +DCCLVV    RP+ +  +DL                LE I     ++ NDSLR DVSL+FPP+ I L+ I +A     +G + ++W  E++ D +K+ +  + I  +Y LWKSF+EK+E+  ++AK+PKP
Sbjct:    1 MALNFWKSSHCQQWIFDKTEIWKQRAEDMKIYNEEEYNRLNIFWANFITAVATEGAHSQANVGCKLRQQVIATAIIYFKRFYLRQSFRDMCPFLVASTALFLACKVEEHTTLSVSSFLKNTAIVLPKRWGVTFETTS--TKNGVVYDSEFILVEILDCCLVVHHASRPMFELLEDLKQFTQQSTIANQPIKDLEAIEAQCQKVANDSLRCDVSLIFPPHVIGLSSIMVAMELMGRGEELEAWLVEVDTDFEKVTDCVEQIYKMYTLWKSFDEKEEVKKLMAKLPKP 284

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BLAST of Cyclin-C vs. SwissProt
Match: gi|75014141|sp|Q86KE7.1|CCNC_DICDI (RecName: Full=Cyclin-C)

HSP 1 Score: 190.274 bits (482), Expect = 1.176e-58
Identity = 104/261 (39.85%), Postives = 155/261 (59.39%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLEDI-LGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWK--SFEEKKEMSSILAKMP 258
            MA NFW+SSHC +W+LD+  +      D Q+L+  E +K+   +   IQ LG  LKLRQ+ I+TA V+FKRFY +NS    +P L+A T ++L+SKVEE   I+  +    C+  +K        +  F Y  N+ILECEF++LE +D CL+++ PY+ L  Y Q  GL+   +   W +VNDS RTDV LL+PP+ + L CI +       D K W +ELNV++  I E+ K +++ YE  K  S + + E+  +  K+P
Sbjct:    1 MAANFWESSHCTEWLLDRNKIEESNPKDKQYLTPIELKKLRTHYCFVIQNLGNALKLRQRAISTAIVYFKRFYLKNSFVDCEPRLVAVTCLYLSSKVEE--CITQAK---KCAAKMKE------IDHSFNYLMNDILECEFFVLEELDFCLIIYHPYKSLPFYLQSSGLDPASIEIIWGIVNDSYRTDVCLLYPPFVVGLGCILLGSYLLKKDIKQWLSELNVEMKDIWEVSKDLIDYYEFEKQQSLQNQSELDLLYNKLP 250

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BLAST of Cyclin-C vs. SwissProt
Match: gi|167006511|sp|P0C654.1|CCNC_CAEBR (RecName: Full=Cyclin-C)

HSP 1 Score: 188.734 bits (478), Expect = 1.990e-57
Identity = 104/282 (36.88%), Postives = 161/282 (57.09%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQL---------KLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNIL-ECEFYLLENMDCCLVVFQPYRPLVQYCQDL-------------GLEDILGAAWRLVNDSLRTDVSLLFPPYQIALACIH--MACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKM 257
            MA +FW+SSH  QWI DK ++ ++R  D +  SEEEY ++ IF+ANFI  +  +          KLRQQVIATA V+FKRFY + S + + P L+A T++FLA KVEE   +S +  +   + V+  ++  A+         N +L + EF L+E +DCCLVV    RP+ +  +D                + I     ++VND+LR DV L+F P+ I LA I   M    +G + + W  E++ D+DK+ +    I  +Y+LW+SF+EK+E+  ++AK+
Sbjct:    1 MALDFWKSSHAQQWIFDKTEIWKQRAEDMKTYSEEEYSRLNIFWANFITAVATECAHSQANVGCKLRQQVIATAIVYFKRFYLRQSFRDMCPFLVASTALFLACKVEEHTTLSVSSFLKNTALVLPKRWGVAFETNS---AKNGVLYDSEFILVEILDCCLVVHHATRPMFELLEDWKQHTLTSTNTPVKDFDQIEIQCQKVVNDTLRCDVGLMFAPHCIGLASISVGMELMGRGEELEDWLVEVDTDMDKLADCINQIYTMYQLWRSFDEKEEVKKLMAKL 279

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BLAST of Cyclin-C vs. SwissProt
Match: gi|3334144|sp|P93411.1|CCC11_ORYSJ (RecName: Full=Cyclin-C1-1; Short=CycC1;1)

HSP 1 Score: 184.111 bits (466), Expect = 3.937e-56
Identity = 104/243 (42.80%), Postives = 151/243 (62.14%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADF-QFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLEDILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWK 242
            MA NFW SSHC Q +LD+ D+ +   AD  + ++ EE++ V I  +  I  L +Q+K+RQ+VIATA  +F+R Y++ S+   DP L+APT ++LASKVEE  V    RL+      IK   A    ++ + +   +ILE E  LLE +D  LVV+ PYRPL+Q  QD G+ D+   AW +VND+ + D+ L+ PPY IALACI++A   K  D   WF EL VD++ ++ I   IL+ Y+ +K
Sbjct:    1 MAANFWTSSHCKQ-LLDQEDVDKVPQADSDRGITLEEFRLVKIHMSFHIWRLAQQVKVRQRVIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTV--QARLL---VFYIKKMCA---SDEKYRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLQLLQDAGITDLTQFAWGIVNDTYKMDLILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNIVKNISMEILDFYDTYK 234

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BLAST of Cyclin-C vs. SwissProt
Match: gi|75309141|sp|Q9FJK7.1|CCC12_ARATH (RecName: Full=Cyclin-C1-2; Short=CycC1;2)

HSP 1 Score: 162.925 bits (411), Expect = 5.238e-48
Identity = 90/251 (35.86%), Postives = 148/251 (58.96%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWI-LDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED--ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKK 248
            MA NFW S+H  +    ++V+++    A  + +S E+++ + +  +N+I  L + +K+RQ+V+ATA  + +R Y++ SL   +P L+APT ++LA K EE  V+    L+     +        Y ++ F Y   +ILE E  +LE ++  LVVF PYR L ++ QD G+ D  +    W LVND+ R D+ L+ PP+ I LACI++A   K  D K+WF EL+VD++ ++ I   IL+ YE  + F E++
Sbjct:    1 MASNFWTSTHYKELKDPEEVNVVHPLDAQ-RGISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEE-SVVHAKLLVFYMKKL--------YADEKFRYEIKDILEMEMKVLEALNFYLVVFHPYRSLPEFLQDSGINDTSMTHLTWGLVNDTYRMDLILIHPPFLITLACIYIASVHKEKDIKTWFEELSVDMNIVKNIAMEILDFYENHRLFTEER 241

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BLAST of Cyclin-C vs. SwissProt
Match: gi|147636402|sp|Q9FJK6.2|CCC11_ARATH (RecName: Full=Cyclin-C1-1; Short=CycC1;1)

HSP 1 Score: 154.836 bits (390), Expect = 9.089e-45
Identity = 88/256 (34.38%), Postives = 149/256 (58.20%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILD--KVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLEDIL--GAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSS 252
            MA NFW SSH  Q +LD  +VD++ +   + + +S ++++ +    +N I  L + +K+RQ+V+ATA  + +R Y + S+   +P L+A T ++LASK EE  ++    L+     +        YP++   Y   +IL  E  +LE +D  LVVF PYR L ++ QD  L D+      W +VND+ + D+ L+ PPY+IALACI++A   +  D  +WF +L+ D++ ++ I   IL+ YE +++  E+K  S+
Sbjct:    1 MAANFWNSSHYKQ-LLDPEEVDVVHDLDKE-RGISIDDFKLIKFHMSNHIMKLAQHIKVRQRVVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEE-SIVQARNLVFYIKRL--------YPDEYNKYELKDILGMEMKVLEALDYYLVVFHPYRSLSEFLQDAALNDVNMNQITWGIVNDTYKMDLILVHPPYRIALACIYIASVHREKDITAWFEDLHEDMNLVKNIAMEILDFYENYRTITEEKVNSA 245

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BLAST of Cyclin-C vs. SwissProt
Match: gi|74659971|sp|Q6CAC7.1|SSN8_YARLI (RecName: Full=RNA polymerase II holoenzyme cyclin-like subunit)

HSP 1 Score: 127.102 bits (318), Expect = 6.868e-34
Identity = 78/280 (27.86%), Postives = 139/280 (49.64%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHA--------DFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLEDI--------LGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACT-----------AKGVDAK-----SWFAELNVDLDKIQEICKFILNLYELWKSFEEKK 248
            M+ N+W SS    W+L K  L   R            Q +       V ++    I  LG+ L +RQ+++ATA V+  RF+++     ++P L+  T++++A KVEE     + + I T ++  ++ +   Y + D       I ECEFYL+E +   LV+F PY+ L+Q    +   +         +   W ++NDS  TD+ LL PP+ +A+ACI+M              ++ V ++     ++F E NVDL++  +  + +++LY  W ++ EK+
Sbjct:    1 MSANYWTSSQRLHWLLTKETLAERRKGLEDIFDPGKLQTIKALNPWHVRVYLHTLIHLLGQNLSIRQRILATAEVYLTRFHTKVPFGEINPYLVVATAVYVACKVEE-----HPQHIRTITSEARSLWP-DYISHD----PTKIAECEFYLIEELGTYLVIFHPYKSLMQISDAMARSNAQITMAPEEIQVTWSMINDSYITDLHLLNPPHIVAMACIYMTVVLRSHIMRMTMPSEAVKSRIEAFMTFFGESNVDLEQTIDCVQEMISLYVNWDTYSEKQ 270

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BLAST of Cyclin-C vs. SwissProt
Match: gi|166222388|sp|Q2UDB2.2|SSN8_ASPOR (RecName: Full=RNA polymerase II holoenzyme cyclin-like subunit)

HSP 1 Score: 119.783 bits (299), Expect = 6.422e-31
Identity = 90/313 (28.75%), Postives = 146/313 (46.65%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLL--------RERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYA---YPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGL-EDILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAK-------GVDAK--------------------------------SWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKS 262
            MA N+W S+    W+  K  L         R++ A  QF   ++ + + I+F+  +  LG+++  RQQ +ATA V+ KRFY++N ++  +P L+  T+ +LA K+EE            C   I+   A A   +P    P   + + ECEF L+  M+  L+V  PYR L +   +L L  D +  AW ++ND   TD+ LL+PP+ IA+  I +A   K       G  A                                  W AE  VD+  + E  + +++LYE+W+++ E K    +L +M K K+
Sbjct:    1 MAANYWASTQRRHWLFTKERLADIRESFRERDKAAHSQFPLPDQ-RLLNIYFSQQLIKLGKRMSTRQQALATAQVYIKRFYTKNEIRHTNPYLVVTTAFYLACKMEE------------CPQHIRFVVAEARNFWPEFIAP-DVSKLGECEFALISEMNSQLIVHHPYRTLSELQPELSLTSDEVALAWSVINDHYLTDLPLLYPPHVIAVMAIIVAVVFKPSQTSFHGTAAPLAGAMRDGGMNILAALGDKNGAGPPPRIQKLVGWLAESEVDIRAVIECTQELVSLYEIWENYSE-KHCKELLGRMVKSKN 298

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BLAST of Cyclin-C vs. SwissProt
Match: gi|121740937|sp|Q0CV29.1|SSN8_ASPTN (RecName: Full=RNA polymerase II holoenzyme cyclin-like subunit)

HSP 1 Score: 116.701 bits (291), Expect = 1.069e-29
Identity = 88/312 (28.21%), Postives = 148/312 (47.44%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDL--LRERHADFQFLSEEEY----QKVI-IFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYA---YPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGL-EDILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAK---------------------GVDAKS------------------WFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKS 262
            MA N+W S+    W+  +  L  +RE   +   ++  ++    Q+++ I+F+  +  LG++   RQQ +ATA V+ KRFY++N ++  +P L+  T+ +LA K+EE            C   I+   A A   +P    P   + + ECEF L+  M+  L+V  PYR L +   +L L  D +  AW ++ND   TD+ LL+PP+ IA+  I +A   K                     GV+  +                  W AE  VD+  + E  + +++LYE+W+ + E K    +L +M K K+
Sbjct:    1 MAANYWVSTQRRHWLFTRERLADIREGFKERDKVAHSQFPLPDQRLLNIYFSQQLIKLGKRTTTRQQALATAQVYIKRFYTKNDIRHTNPYLVITTAFYLACKMEE------------CPQHIRFVVAEARSFWPEFIAP-DVSKLGECEFALISEMNSQLIVHHPYRTLSELTPELQLTSDEVALAWSVINDHYLTDLPLLYPPHVIAVMAIIVAVVFKPSQTSFHGSAGPALAGAMRDGGVNLLAALGDKNGNGPPRIQKLVGWLAESEVDIKAVIECTQELVSLYEIWEQYSE-KHCKELLGRMVKSKN 298

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|225717678|gb|ACO14685.1| (Cyclin-C [Caligus clemensi])

HSP 1 Score: 433.335 bits (1113), Expect = 1.594e-151
Identity = 205/262 (78.24%), Postives = 234/262 (89.31%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPK 261
            MAGNFW SSHCAQWIL+K DLLRERHADFQ L+E+EYQK+IIF+A+FIQTLGE+LKLRQ+VIATATVFFKRFYSQNSLKC+DPLLLAPTS+FLASKVEEFGVISNTRLINTC+ VIKNKF+YAYPNQDFPYRANNILECEFYLLEN+DCCLVVF PYRPLV +C+DL +E+ +L  AWR+VNDSLRTDV LL+PPYQIALAC+H+AC     D   WFAELNVDL+K+Q+I K+I   YEL K F+EKKEM+ +L KM KPK
Sbjct:    1 MAGNFWTSSHCAQWILNKNDLLRERHADFQSLTEDEYQKIIIFYASFIQTLGERLKLRQRVIATATVFFKRFYSQNSLKCIDPLLLAPTSVFLASKVEEFGVISNTRLINTCTNVIKNKFSYAYPNQDFPYRANNILECEFYLLENLDCCLVVFLPYRPLVLFCKDLNVEESVLPFAWRVVNDSLRTDVCLLYPPYQIALACLHIACAILNKDCVQWFAELNVDLEKVQDIVKYINGFYELQKIFDEKKEMAGVLGKMAKPK 262

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|1022759717|gb|KZS06036.1| (G1/S-specific cyclin C-like protein [Daphnia magna])

HSP 1 Score: 415.231 bits (1066), Expect = 3.511e-144
Identity = 194/274 (70.80%), Postives = 232/274 (84.67%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLEDILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSP---PPNQGQMQ 271
            MAGNFWQSSHC QW+LD  DL+RER  DF  ++EE+YQK+ IFF+NFIQ LGE LKL+QQVIATATV+FKRFY++NSLKC+DPLLLAPT I LASKVEEFGVISN RLI TC +V+K+KF YAYP Q+FPYRAN+ILECEFYLLENMDCCLVV+QPYRPLVQ+ QD+G ED+LG +W++VNDSLRTD+SLL+PPYQIALA + MAC     D K+WFAE+ VD DKIQEI + IL LY+L+K+++EKKE+  +LAKMPKPKS    PP+  Q Q
Sbjct:    1 MAGNFWQSSHCQQWLLDPSDLVRERQVDFAVVTEEDYQKLFIFFSNFIQVLGEHLKLKQQVIATATVYFKRFYARNSLKCIDPLLLAPTCILLASKVEEFGVISNNRLITTCQSVVKSKFNYAYP-QEFPYRANHILECEFYLLENMDCCLVVYQPYRPLVQFVQDIGQEDLLGLSWKIVNDSLRTDISLLYPPYQIALAAMQMACVVLQKDGKNWFAEIAVDTDKIQEITRQILALYDLYKTYDEKKEIQGLLAKMPKPKSQPSRPPSSAQSQ 273

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|1133431698|ref|XP_019871879.1| (PREDICTED: cyclin-C [Aethina tumida])

HSP 1 Score: 412.92 bits (1060), Expect = 1.203e-143
Identity = 192/265 (72.45%), Postives = 230/265 (86.79%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264
            MAGNFWQSSH  QW+LDK DL+RER  D   LSEEEYQK+ IFFA+ IQ+LGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT IFLASKVEEFGVISN+RLI TC TVIKNKF+YAY  Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q  QD+G E+ +L  +WR+VNDSLRTDVSLL+PPYQIA+ C+ +AC     D K+WFAELNVD++KIQEI ++I+NL+ELWK+++EKKE+  +LAKMPKPK  P
Sbjct:    1 MAGNFWQSSHHQQWLLDKQDLIRERQHDLSILSEEEYQKIFIFFASVIQSLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTCIFLASKVEEFGVISNSRLITTCQTVIKNKFSYAY-TQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDIGQEEQLLTLSWRIVNDSLRTDVSLLYPPYQIAIGCLQIACVILQKDHKAWFAELNVDIEKIQEIARYIINLFELWKTYDEKKEIQGLLAKMPKPKPAP 264

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|939678514|ref|XP_014284839.1| (PREDICTED: cyclin-C [Halyomorpha halys])

HSP 1 Score: 412.535 bits (1059), Expect = 2.181e-143
Identity = 190/265 (71.70%), Postives = 232/265 (87.55%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264
            MAGNFWQSSH  QW+LDK DL+RER  D   L++EEYQK+ IFF+NFIQTLGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT IFLASKVEEFGVISN+RLI TC TV+KNKF+YAY +Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q   D+G ED +L  AWR+VNDSLRTDV LL+PPYQIA+  +H+AC     D KSWFAELNVD++KIQEI ++I++L+ELWK+++EKK++ ++LAKMPKPK+ P
Sbjct:    6 MAGNFWQSSHYQQWVLDKQDLIRERQQDLSVLTDEEYQKIFIFFSNFIQTLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTCIFLASKVEEFGVISNSRLITTCQTVVKNKFSYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLLADIGNEDQLLALAWRVVNDSLRTDVCLLYPPYQIAIGSLHIACVVLQKDLKSWFAELNVDMEKIQEIVRYIVSLFELWKTYDEKKDIQALLAKMPKPKTQP 269

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|755953872|ref|XP_011302579.1| (PREDICTED: cyclin-C [Fopius arisanus])

HSP 1 Score: 412.149 bits (1058), Expect = 2.648e-143
Identity = 192/265 (72.45%), Postives = 227/265 (85.66%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264
            MAGNFWQSSH  QW+LDK DL+RER  D   L+EEEYQK+ IFFAN IQ LGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPTS+FLASKVEEFGVISNTRLI TC TV+KNKF YAY  QDFPYR N+ILECEFYLLE++DCCL+V+QPYRPL+   QD+G +D +L  AWR++NDSLRTDV LL+PPYQIA+ C+ +AC     D KSWFAELN D++KIQEI + I+NLYELWK+++EKKE+ S+LAKMPKPK+ P
Sbjct:    1 MAGNFWQSSHHQQWLLDKQDLVRERQHDISILTEEEYQKLFIFFANLIQVLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTSVFLASKVEEFGVISNTRLITTCQTVVKNKFNYAY-TQDFPYRTNHILECEFYLLEHLDCCLIVYQPYRPLLTLIQDVGPDDQLLTLAWRIINDSLRTDVCLLYPPYQIAIGCLQIACVILQKDLKSWFAELNADMEKIQEIARHIINLYELWKTYDEKKEIQSLLAKMPKPKAAP 264

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|91093000|ref|XP_968481.1| (PREDICTED: cyclin-C [Tribolium castaneum] >gi|1004401486|gb|KYB28405.1| Cyclin-C-like protein [Tribolium castaneum])

HSP 1 Score: 412.149 bits (1058), Expect = 2.827e-143
Identity = 191/265 (72.08%), Postives = 230/265 (86.79%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264
            MAGNFWQSSH  QW+LDK DL+RER  D Q L+EEEYQK+ IFFA+ IQTLGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT IFLASKVEEFGVISN+RLI TC TVIKNKF+YAY +Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q  QD+G ED +L  AWR+VNDSLRTDV LL+PPYQIA+ C+ +AC     D K+WFAELNVD+++IQEI ++++NL+ELWK+++EKKE+  +L KMPKPK  P
Sbjct:    1 MAGNFWQSSHHQQWLLDKQDLIRERQHDLQLLTEEEYQKIFIFFASVIQTLGEQLKLRQQVIATATVYFKRFYAKNSLKCIDPLLLAPTCIFLASKVEEFGVISNSRLITTCQTVIKNKFSYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLAWRIVNDSLRTDVCLLYPPYQIAIGCLQIACVILQKDHKAWFAELNVDIERIQEIARYVINLFELWKTYDEKKEIQGLLNKMPKPKPAP 264

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|1228008299|ref|XP_021936056.1| (cyclin-C [Zootermopsis nevadensis] >gi|646700550|gb|KDR10660.1| Cyclin-C [Zootermopsis nevadensis])

HSP 1 Score: 411.379 bits (1056), Expect = 4.579e-143
Identity = 190/265 (71.70%), Postives = 230/265 (86.79%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264
            MAGNFW+SSH  QW+LD+ DL+RER  D   L+EEEYQK+ IFF+N IQ LGEQLKLRQQVIATATVFFKRFY++NSLKC+DPLLLAPT +FLASKVEEFGVISN+RLI TC  V+KNKF+YAY +Q+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q  QD+G ED +L  AWR+VNDSLRTDV LL+PPYQIAL C+ +AC     D KSWFAELNVD++KIQEI ++++NL+ELWKS++EKK++ S+LAKMPKPK+ P
Sbjct:    1 MAGNFWESSHHQQWLLDRQDLIRERQQDLSVLTEEEYQKIFIFFSNLIQILGEQLKLRQQVIATATVFFKRFYARNSLKCIDPLLLAPTCVFLASKVEEFGVISNSRLITTCQNVVKNKFSYAY-SQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLIQDIGQEDQLLALAWRVVNDSLRTDVCLLYPPYQIALGCLQIACVILQKDLKSWFAELNVDIEKIQEIARYVINLFELWKSYDEKKDIQSLLAKMPKPKTQP 264

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|321477722|gb|EFX88680.1| (G1/S-specific cyclin C-like protein [Daphnia pulex])

HSP 1 Score: 410.994 bits (1055), Expect = 7.475e-143
Identity = 189/264 (71.59%), Postives = 227/264 (85.98%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLEDILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264
            MAGNFWQSSHC QW+LD  DL+RER  DF  ++EE+YQK+ IFF+NFIQ LGE LKL+QQVIATATV+FKRFY++NSLKC+DPLLLAPT I LASKVEEFGVISN RLI TC +V+K+KF YAYP Q+FPYRA +ILECEFYLLENMDCCLVV+QPYRPLVQ+ QD+G ED+LG +W++VNDSLRTD+SLL+PPYQIALA + MAC     D K+WFAE+ VD DKIQEI + IL LY+L+K+++EKKE+  +LAKMPKPK+ P
Sbjct:    1 MAGNFWQSSHCQQWLLDPSDLVRERQGDFAIVTEEDYQKLFIFFSNFIQVLGEHLKLKQQVIATATVYFKRFYARNSLKCIDPLLLAPTCILLASKVEEFGVISNNRLITTCQSVVKSKFNYAYP-QEFPYRAQHILECEFYLLENMDCCLVVYQPYRPLVQFVQDIGQEDLLGLSWKIVNDSLRTDISLLYPPYQIALAAMQMACVVLQKDGKNWFAEIAVDTDKIQEITRQILALYDLYKTYDEKKEIQGLLAKMPKPKTQP 263

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|1069821358|ref|XP_018333610.1| (PREDICTED: cyclin-C isoform X1 [Agrilus planipennis])

HSP 1 Score: 410.609 bits (1054), Expect = 1.008e-142
Identity = 195/265 (73.58%), Postives = 227/265 (85.66%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264
            MAGNFWQSSH  QW+LDK DL+RER  D   LSEEEYQK+ IFFA+ IQ+LGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPT IFLASKVEEFGVISN+RL+ TC TVIKNKFAYAY NQ+FPYR N+ILECEFYLLEN+DCCL+V+QPYRPL+Q  QDLG E+ +L  AWR+VNDSLRTDV LL+PPYQIA+ C+ +AC     D KSWFAELNVD++KIQEI + I+NLYELWK ++EKKE+  +L KMPKPK  P
Sbjct:    1 MAGNFWQSSHHQQWLLDKQDLIRERQYDLSVLSEEEYQKIFIFFASVIQSLGEQLKLRQQVIATATVYFKRFYAKNSLKCIDPLLLAPTCIFLASKVEEFGVISNSRLLTTCQTVIKNKFAYAY-NQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQMVQDLGHEEQLLTLAWRIVNDSLRTDVCLLYPPYQIAIGCLQIACVILQKDHKSWFAELNVDIEKIQEIARCIINLYELWKQYDEKKEIQGLLNKMPKPKPAP 264

[Close]

BLAST of Cyclin-C vs. nr
Match: gi|1000744182|ref|XP_015594794.1| (PREDICTED: cyclin-C [Cephus cinctus] >gi|1000744184|ref|XP_015594795.1| PREDICTED: cyclin-C [Cephus cinctus] >gi|1000744186|ref|XP_015594796.1| PREDICTED: cyclin-C [Cephus cinctus])

HSP 1 Score: 410.223 bits (1053), Expect = 1.296e-142
Identity = 190/265 (71.70%), Postives = 230/265 (86.79%), Query Frame = 0

Query:    1 MAGNFWQSSHCAQWILDKVDLLRERHADFQFLSEEEYQKVIIFFANFIQTLGEQLKLRQQVIATATVFFKRFYSQNSLKCVDPLLLAPTSIFLASKVEEFGVISNTRLINTCSTVIKNKFAYAYPNQDFPYRANNILECEFYLLENMDCCLVVFQPYRPLVQYCQDLGLED-ILGAAWRLVNDSLRTDVSLLFPPYQIALACIHMACTAKGVDAKSWFAELNVDLDKIQEICKFILNLYELWKSFEEKKEMSSILAKMPKPKSPP 264
            MAGNFWQSSH  QW+LDK DL+RER  D   L+EEEYQK+ IFF+N IQ LGEQLKLRQQVIATATV+FKRFY++NSLKC+DPLLLAPTS+FLASKVEEFGVISNTRLI+TC TV+KNKF YAY +Q+FPYR N+ILECEFYLLE++DCCL+V+QPYRPL+   QD+G +D +L  AWR++NDSLRTDV LL+PPYQIA+ C+ +AC     D KSWFAELN D++KIQEI ++I+NLYELWK+++EKKE+ S+LAKMPKPK+ P
Sbjct:    1 MAGNFWQSSHHQQWLLDKQDLVRERQHDLSILTEEEYQKLFIFFSNLIQVLGEQLKLRQQVIATATVYFKRFYARNSLKCIDPLLLAPTSVFLASKVEEFGVISNTRLISTCQTVVKNKFNYAY-SQEFPYRTNHILECEFYLLEHLDCCLIVYQPYRPLLTLIQDVGPDDQLLTLAWRIINDSLRTDVCLLYPPYQIAIGCLQIACVILQKDLKSWFAELNADMEKIQEIARYIINLYELWKAYDEKKEIQSLLAKMPKPKAAP 264

The following BLAST results are available for this feature:

BLAST of Cyclin-C vs. L. salmonis genes
BLAST of Cyclin-C vs. SwissProt
BLAST of Cyclin-C vs. nr

BLAST of Cyclin-C vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 5


Match Name	E-value	Identity	Description
EMLSAG00000000139	1.404e-93	73.60	supercontig:LSalAtl2s:LSalAtl2s1021:54890:58082:-1...	[more]
EMLSAG00000000197	1.671e-18	27.43	supercontig:LSalAtl2s:LSalAtl2s1029:207469:226371:...	[more]
EMLSAG00000001699	1.107e-15	26.43	supercontig:LSalAtl2s:LSalAtl2s1294:14773:20030:-1...	[more]
EMLSAG00000012186	4.339e-9	28.10	supercontig:LSalAtl2s:LSalAtl2s87:623663:624424:1 ...	[more]
EMLSAG00000004351	3.585e-7	25.33	supercontig:LSalAtl2s:LSalAtl2s229:214329:219598:-...	[more]

BLAST of Cyclin-C vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|166214950\|sp\|P39947.2\|CCNC_RAT	2.009e-124	65.19	RecName: Full=Cyclin-C	[more]
gi\|75024894\|sp\|Q9TYP2.2\|CCNC_CAEEL	2.385e-64	37.76	RecName: Full=Cyclin-C	[more]
gi\|75014141\|sp\|Q86KE7.1\|CCNC_DICDI	1.176e-58	39.85	RecName: Full=Cyclin-C	[more]
gi\|167006511\|sp\|P0C654.1\|CCNC_CAEBR	1.990e-57	36.88	RecName: Full=Cyclin-C	[more]
gi\|3334144\|sp\|P93411.1\|CCC11_ORYSJ	3.937e-56	42.80	RecName: Full=Cyclin-C1-1; Short=CycC1;1	[more]
gi\|75309141\|sp\|Q9FJK7.1\|CCC12_ARATH	5.238e-48	35.86	RecName: Full=Cyclin-C1-2; Short=CycC1;2	[more]
gi\|147636402\|sp\|Q9FJK6.2\|CCC11_ARATH	9.089e-45	34.38	RecName: Full=Cyclin-C1-1; Short=CycC1;1	[more]
gi\|74659971\|sp\|Q6CAC7.1\|SSN8_YARLI	6.868e-34	27.86	RecName: Full=RNA polymerase II holoenzyme cyclin-...	[more]
gi\|166222388\|sp\|Q2UDB2.2\|SSN8_ASPOR	6.422e-31	28.75	RecName: Full=RNA polymerase II holoenzyme cyclin-...	[more]
gi\|121740937\|sp\|Q0CV29.1\|SSN8_ASPTN	1.069e-29	28.21	RecName: Full=RNA polymerase II holoenzyme cyclin-...	[more]

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BLAST of Cyclin-C vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225717678\|gb\|ACO14685.1\|	1.594e-151	78.24	Cyclin-C [Caligus clemensi]	[more]
gi\|1022759717\|gb\|KZS06036.1\|	3.511e-144	70.80	G1/S-specific cyclin C-like protein [Daphnia magna...	[more]
gi\|1133431698\|ref\|XP_019871879.1\|	1.203e-143	72.45	PREDICTED: cyclin-C [Aethina tumida]	[more]
gi\|939678514\|ref\|XP_014284839.1\|	2.181e-143	71.70	PREDICTED: cyclin-C [Halyomorpha halys]	[more]
gi\|755953872\|ref\|XP_011302579.1\|	2.648e-143	72.45	PREDICTED: cyclin-C [Fopius arisanus]	[more]
gi\|91093000\|ref\|XP_968481.1\|	2.827e-143	72.08	PREDICTED: cyclin-C [Tribolium castaneum] >gi\|1004...	[more]
gi\|1228008299\|ref\|XP_021936056.1\|	4.579e-143	71.70	cyclin-C [Zootermopsis nevadensis] >gi\|646700550\|g...	[more]
gi\|321477722\|gb\|EFX88680.1\|	7.475e-143	71.59	G1/S-specific cyclin C-like protein [Daphnia pulex...	[more]
gi\|1069821358\|ref\|XP_018333610.1\|	1.008e-142	73.58	PREDICTED: cyclin-C isoform X1 [Agrilus planipenni...	[more]
gi\|1000744182\|ref\|XP_015594794.1\|	1.296e-142	71.70	PREDICTED: cyclin-C [Cephus cinctus] >gi\|100074418...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold2471_size15358	supercontig	scaffold2471_size15358:6075..8291 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:regulation of transcription
Note	DNA-dependent

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold2471_size15358-snap-gene-0.6-mRNA-1	maker-scaffold2471_size15358-snap-gene-0.6-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold2471_size15358:6075..8291+

gene from alignment at scaffold2471_size15358:6075..8291+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold2471_size15358-snap-gene-0.6 ID=maker-scaffold2471_size15358-snap-gene-0.6|Name=Cyclin-C|organism=Tigriopus kingsejongensis|type=gene|length=2217bp|location=Sequence derived from alignment at scaffold2471_size15358:6075..8291+ (Tigriopus kingsejongensis)
GGAAGCTTCGTTTTCCCATCACAAAGTTCTCCAAGTCACAACTCAAAGCA
CTCAAAGCACTCGATCCACAGTGGGTTGAGTCCCCGACCCCTCTGGTCGC
CACAACGGGGTTGCGATTGCCGTGGATCCTCGCCCGCTTGGTTGATGGCC
ACCTCCGGAAGCTCGTCCTCGGCCTCCCAGATCTTGGCCGCCAAGGAGAC
CTTCTCGCTGCTCCAAGAGCTGAGCCGGCTCTTGAACACGGGTCTGGACT
CGGAGTCGCTGGCCTTGTGCGTGCGGCTCTGCGAGAACGGGGCCCATCCC
CAGGCCTTGGCCACCGTCATCCAGGAGATCAAGAAGCAGGCCCAGGCCCT
CCAGCCCGAGGCCAGCGAAGCTTGAGGCCGACGCACCGAGCATGGGCGTG
GTGGTGCTCCAGCCCTACCCGGTGCCCGCAGACAAGACCGTGCCGCAGAT
CATCGAGGTGCTCCAGAAGCGGATCGTCAATCTGGGCGCCCAGCCCGCCG
GCCAGTTCCTGGTCGACTGCGAGACCTACTTCTCCACCCAGGCCCTCACC
AACCCGCCCAAGACGCTCAACGTGCTCCACAACTCCGAGCAGCCGGCCAC
GGTCTTCTCGGTGCTGGAGAACGTGAACAAGTCGGTGACATTCACGAGCG
ACACGCTCTTCGACTTGCTGCTCCTCAAGCTGACCAACGTGTACCAGAAA
AAGTCCCGGATCGAGTCCAAGGGCTCGCGCTTCGAGATCGGCGACTTCCT
CGTCAAGTTGGGCATCGTCACCGTCTCGGGCTCGTGCAAGGGGATCCTCG
TCGAGGTCGAGTACCTGCCCTGCGTCGTGGTCCAGAGCTGCTGGGGACTG
GTCTTCGAGTTCATGCAAGGCTTCCTGGGACACGTCGTTCACCAGCAGAT
CCCCACCCACCTCAAGCGCAAGGCGGCCAGCGACAACTACTCGCCCGTGG
ACACCATCCAACAGTACTTGGAGCAGTTTGCCGCCTTTCGCAAGCACACC
ACCGTCGGGCAGAGCAATCCCCGTCATCCGGCCAACCCGCCCGCCCAAGT
CCCGCCCACCTCCGGTTAAACCGCCACGATGGCCGGCAACTTCTGGCAGA
GCTCGCACTGCGCTCAGTGGATCCTGGACAAGGTGGACTTGTTGCGCGAG
CGACACGCCGACTTCCAGTTCCTCTCCGAGGAAGAGTACCAGAAGGTCAT
CATTTTCTTCGCCAACTTCATCCAGACCTTGGGCGAGCAACTTAAGCTGC
GCCAGCAGGTCATCGCCACGGCCACGGTCTTCTTCAAGCGCTTCTACTCG
CAGAACTCGCTCAAGTGCGTGGACCCACTCCTCCTGGCGCCCACCTCCAT
CTTCCTGGCCAGCAAGGTGGAGGAATTCGGGGTGATCTCGAACACGCGAC
TCATCAACACCTGCTCGACGGTCATCAAGAACAAATTCGCTTACGCTTAT
CCCAACCAAGACTTTCCCTACCGGTAAGTTTCTCCTATGATTTCCCCCTC
CCCCCCCCCCACCAGCCCCTAATAGCATCATACCAATGACACACTTTCCC
CCCCTCCAGGGCCAACAATATCCTGGAATGCGAGTTCTACTTGCTGGAAA
ACATGGACTGCTGCCTGGTGGTCTTCCAGCCCTACCGTCCCCTCGTGCAG
TATTGCCAGGATCTGGGGCTCGAGGACATCCTGGGGGCCGCCTGGCGCCT
CGTCAACGATTCCCTGAGGACCGACGTGTCTCTCCTCTTCCCGCCCTACC
AGATTGCCCTGGCCTGCATCCACATGGCGTGCACGGCCAAGGGCGTGGAC
GCCAAGAGCTGGTTTGCCGAGCTCAACGTAGACCTCGACAAGATCCAGGA
GATCTGCAAGTTCATCCTCAATCTCTACGAGCTGTGGAAGTCCTTCGAGG
AGAAGAAGGAGATGAGCAGCATCCTGGCCAAAATGCCCAAACCCAAGAGC
CCTCCACCCAATCAGGGTCAAATGCAGCAGCAGCAGATCTGAGAGTGCCA
CGAGTGTTCTCTTCAAAAACCACTTTGAGACGAAAGGCATGTGTGTAACA
GTGTAAACGATCACCAAGGGGGATGGACATAAAAGCCGACAATATCTGAC
ACGGTCGTTGAATTGAGCCAGATCACTGGAAGATTGACCACGGGGGTACT
TCATATGGAAGAGGCGGTCGCTTGTCCATCTCCATGTCGACGAGGAGCTG
GACGCGGTTCTCCATGT

Synonyms

The feature 'Cyclin-C' has the following synonyms


Synonym
Tk06066

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