3-oxoacyl-acp synthase, maker-scaffold247_size239117-snap-gene-1.19 (gene) Tigriopus kingsejongensis

Overview
Name3-oxoacyl-acp synthase
Unique Namemaker-scaffold247_size239117-snap-gene-1.19
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 3-oxoacyl-acp synthase vs. L. salmonis genes
Match: EMLSAG00000004691 (supercontig:LSalAtl2s:LSalAtl2s245:667741:668821:1 gene:EMLSAG00000004691 transcript:EMLSAT00000004691 description:"maker-LSalAtl2s245-augustus-gene-5.12")

HSP 1 Score: 87.8113 bits (216), Expect = 1.622e-20
Identity = 74/265 (27.92%), Postives = 112/265 (42.26%), Query Frame = 0 
Query:   48 NKCQEVTDMGSGVCAILYTDDDCRGDAYPIGEVAGNLPLTYQNRFESILLRANCSFYGYDDSINKIGHSVASLFLGQKSNSDKIEALDDVVELFAPANENLAIDFDNADSNDNLEQDIEFVACKCG----------------------NTPPCGAVPKHLCAKCYDENGCDRSDWDNFLGIPITDKYSLSRGDGG-----RNGIESCLVRSGCSLTLIDTDVIGNDGQYTFTAPTNGDLHFDMNGNPDSKIDDLSNDAEHVKCSC 285
            N+C E T +  G+CA+LY DD C G  + I E    L   Y+N  E+++++  C F G+D       +       G++        L D    F P N      + N D N +L  DI  + C+C                        +  C  +P+H CA  +DE  C   DWDN + +   +  S S  +       +N +ES +VR GC     D     +DG        NGDL  ++N + + K + L+ND E V+C C
Sbjct:   31 NECLEKT-VPHGMCAVLYDDDGCEGWEHAIREGYTELTWWYRNDAEAVIVKKGCVFKGFDH------YGAIEADRGER-------LLMDARNFFKPYNM-----WKNLDRN-SLVDDISSIECECFGDKELNEQRREERRAIDPGSNIESSKCPPMPRHACAVLFDEENCRNDDWDNSIVLADGEDRSFSLFNSMMNFKYKNEVESFMVREGCIFEAYDDSDYSDDG--IRVRALNGDLLINLNSHRNDKYESLNNDIESVRCFC 273
The following BLAST results are available for this feature:
BLAST of 3-oxoacyl-acp synthase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000046911.622e-2027.92supercontig:LSalAtl2s:LSalAtl2s245:667741:668821:1... [more]
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BLAST of 3-oxoacyl-acp synthase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of 3-oxoacyl-acp synthase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold247_size239117supercontigscaffold247_size239117:136861..138221 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold247_size239117-snap-gene-1.19-mRNA-1maker-scaffold247_size239117-snap-gene-1.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold247_size239117:136861..138221+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold247_size239117-snap-gene-1.19 ID=maker-scaffold247_size239117-snap-gene-1.19|Name=3-oxoacyl-acp synthase|organism=Tigriopus kingsejongensis|type=gene|length=1361bp|location=Sequence derived from alignment at scaffold247_size239117:136861..138221+ (Tigriopus kingsejongensis)
ATTTGAGCAGGTGTCTGGCTGATCGGGCTGGTCAGCCATAGAATAGTTCA
ACGTATCTCGAGGGCACGCGGCTGTTGAGCACTGGATCTGGTTTAGTTCA
AAAAGAGGTTCAGTTCAACCAACTTCCCCCCTAACCATGAGATTCGCGGT
TTCCTCGGTATTATGTGTTTCCCTTTGTCTCGTGGGACCACTGAGCCAGG
CCAAGCCCCAAGGCGAGGGTTTCGGTTCCAAAGTCAGCGACGCTCTCTTG
GGCGTGATTGGGTTGGGGAAGGCCAACAATAAGTGCCAAGAGGTCACGGA
TATGGGCAGTGGCGTCTGTGCCATCCTCTACACAGATGACGATTGTCGAG
GTAGGGATACCAGGGACGATTCAAACAAGTGTCCACTAACCTGATCTGGT
CTCATTTCCGTATTTCAGGCGATGCCTACCCCATTGGTGAGGTCGCTGGC
AATCTGCCGCTGACTTACCAGAATCGATTCGAATCGATTCTGCTCAGAGC
CAATTGCTCCTTCTACGGCTATGACGATTCCATCAACAAGATTGGACACT
CGGTGGCCAGTCTATTCCTGGGCCAAAAGTCCAATTCCGACAAGATCGAG
GCCCTGGATGACGTGGTCGAGCTCTTTGCCCCGGCCAACGAGAATCTGGC
CATCGATTTCGACAACGCCGATTCCAACGACAACTTGGAGCAGGACATTG
AGTTTGTGGCGTGCAAATGCGGCAATACCCGTAAGTCAGGGCCTGGCCCA
TAGTATTGGTGTAAGCACCTAACAATTACTCTAACGTGATACACTTGTTA
CTTTAGCCCCGTGTGGAGCCGTGCCCAAGCATCTTTGCGCCAAGTGCTAC
GACGAAAATGGCTGTGACCGCTCGGATTGGGACAACTTCCTGGGCATTCC
CATCACGGATAAGTACAGCTTGTCCAGAGGCGATGGTGGCCGCAATGGCA
TCGAGTCGTGCTTGGTTCGATCTGGCTGCAGCCTGACCCTCATTGACACG
GATGTGATTGGCAACGATGGCCAGTACACCTTCACCGCTCCCACCAATGG
CGATCTCCACTTCGACATGAATGGCAATCCCGACAGCAAGATCGACGATC
TCTCCAACGATGCCGAGCACGTGAAATGCTCGTGTCCTGGAGAAATCGAA
ATTGCCATCGATGATCTCGATTAAATATCGCACGATGGGCGACTCATCAG
CATTATGTGGCTACCTTTAAACATACGTGCGTGTTTTGAAATGTAACCCC
CATCAAACCTGAGATGTTAAGCGGTGGCCGTTGTCAGCTCTAGATATTAT
GCATAGTACATTCAAAGCTATTTGGGTAATTTGGTGGGAGGTGTCGGAAC
AAGTCTCAATC
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Synonyms
The feature '3-oxoacyl-acp synthase' has the following synonyms
Synonym
Tk09331
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