charged multivesicular body protein 2b, maker-scaffold252_size238019-snap-gene-1.38 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of charged multivesicular body protein 2b vs. L. salmonis genes
Match: EMLSAG00000009635 (supercontig:LSalAtl2s:LSalAtl2s619:80485:81572:-1 gene:EMLSAG00000009635 transcript:EMLSAT00000009635 description:"maker-LSalAtl2s619-augustus-gene-0.7") HSP 1 Score: 282.722 bits (722), Expect = 4.931e-98 Identity = 144/213 (67.61%), Postives = 173/213 (81.22%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESS-AAKKQDLDIEAMLAQLKA 212 MD LFG+K T+KEQ++DNDR LRK +REV RDR +LE EEKKLE EIKKAAK+G K VCT+LAKQLV LRKQK RT+VASSQI AG+ AK M +NVKIA+AMGETS+TMG MNK M+P K+ +++F +AN+KMNMTEE+MNDA DD+L ES DE EE V+NK+LDEIGIEISGK+ +APSA K IGES+ K+D +IE MLAQLKA Sbjct: 1 MDSLFGRKKTLKEQVKDNDRDLRKANREVERDRKKLEMEEKKLEQEIKKAAKSGNKQVCTLLAKQLVNLRKQKNRTFVASSQISAAGYAAKGMASNVKIAEAMGETSRTMGQMNKAMDPKKLAGTLRDFTVANDKMNMTEEVMNDAFDDILGESDDEAEEQGVINKVLDEIGIEISGKMINAPSAGKDTIGESTKTTTKEDREIEEMLAQLKA 213
BLAST of charged multivesicular body protein 2b vs. L. salmonis genes
Match: EMLSAG00000001138 (supercontig:LSalAtl2s:LSalAtl2s118:399399:402184:1 gene:EMLSAG00000001138 transcript:EMLSAT00000001138 description:"maker-LSalAtl2s118-augustus-gene-4.15") HSP 1 Score: 110.923 bits (276), Expect = 1.538e-30 Identity = 68/184 (36.96%), Postives = 119/184 (64.67%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPS 184 M++LFG+K + E LR N RAL K RE+ R+R ++E++EKK+ +IKK AK GQ D ++AK LV+ R+ ++ + + I+ + + + + +A+AM ++ M NMN+ M ++ + MQEF +E M+M EEMM+D +DD L + DE+E D +V+++LDE+G++++ ++ P+ Sbjct: 1 MEWLFGRKMSPDEMLRKNQRALNKAMRELDRERTKMEQQEKKIIGDIKKMAKQGQMDAVRIMAKDLVRTRRYVKKFMLMRANIQAVSLKIQTLKSQNSMAEAMKGVTRAMQNMNRQMKLPQIQKIMQEFEKQSEIMDMKEEMMSDCIDDALGDDEDEDESDAIVSQVLDELGLQLNDQLKDVPA 184
BLAST of charged multivesicular body protein 2b vs. L. salmonis genes
Match: EMLSAG00000000626 (supercontig:LSalAtl2s:LSalAtl2s109:757972:765988:1 gene:EMLSAG00000000626 transcript:EMLSAT00000000626 description:"augustus_masked-LSalAtl2s109-processed-gene-7.1") HSP 1 Score: 86.6557 bits (213), Expect = 2.951e-21 Identity = 60/189 (31.75%), Postives = 100/189 (52.91%), Query Frame = 0 Query: 4 LFG--KKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQI 190 LFG K P KE++ + + LRK + R Q++REE K+ IK++AK G KD C VLA+++V RK + YVA + + Q K + V++A + ++++ M M K++ ++ MQE + K + EEMM D D+ E D+ +++ V+K+L E+ + APS + I Sbjct: 16 LFGRSKSPNPKERVNEWGKKLRKEGYNLDRQIRQIQREEAKVTRSIKESAKRGDKDSCRVLAREVVNSRKTVNKIYVAKANLSSVEMQMKNQASQVRLAGTLSQSTEVMQCMQKLIKLPEIAHTMQELSKEMMKAGIFEEMMEDTFDNEPEELEDDVQKE--VDKVLAELTEGDRKTMEKAPSVPQASI 202
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917749|sp|Q6NVL7.1|CHM2B_XENTR (RecName: Full=Charged multivesicular body protein 2b; AltName: Full=Chromatin-modifying protein 2b; Short=CHMP2b) HSP 1 Score: 204.142 bits (518), Expect = 1.502e-65 Identity = 115/212 (54.25%), Postives = 144/212 (67.92%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M LF KK T+ + +R+ ++ LR R + RDR LE++EK+LEMEIKK AKAG KD C VLAKQLVQLRKQK RTY SS++ Q K M + +K+A AM T+KTM +NK M+P K Q MQ F N KM MTEEM+ND LDD+ S DEEE +VN++LDEIGIEISGK+A APSA KG + +SA+K + E + QLKA Sbjct: 1 MASLF-KKKTVDDIIREQNKELRGTQRAITRDRAALEKQEKQLEMEIKKMAKAGNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKG-LPSTSASKSSGISDEEIERQLKA 210
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917729|sp|Q66IV6.1|CH2BB_XENLA (RecName: Full=Charged multivesicular body protein 2b-B; AltName: Full=Chromatin-modifying protein 2b-B; Short=CHMP2b-B) HSP 1 Score: 201.83 bits (512), Expect = 1.117e-64 Identity = 114/212 (53.77%), Postives = 144/212 (67.92%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M LF KK T+ + +R+ ++ LR R + RDR LE++EK+LEMEIKK AK G KD C VLAKQLVQLRKQK RTY SS++ Q K M + +K+A AM T+KTM +NK M+P K Q MQ F N KM MT+EM+ND LDD+ S DEEE +VN++LDEIGIEISGK+A APSA KG + +SAAK + + E + QLKA Sbjct: 1 MASLF-KKKTVDDIIREQNKELRGTQRAITRDRAALEKQEKQLEMEIKKMAKTGNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTDEMINDTLDDIFDASEDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKG-LPSTSAAKSKGISDEEIERQLKA 210
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917728|sp|Q7SYR0.1|CH2BA_XENLA (RecName: Full=Charged multivesicular body protein 2b-A; AltName: Full=Chromatin-modifying protein 2b-A; Short=CHMP2b-A) HSP 1 Score: 201.06 bits (510), Expect = 2.790e-64 Identity = 114/212 (53.77%), Postives = 144/212 (67.92%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M LF KK T+ + ++D ++ L+ R + RDR LE++EK+LEMEIKK AKAG KD C VLAKQLVQLRKQK RTY SS++ Q K M + +K+A AM T+KTM +NK M+P K Q MQ F N KM MTEEM+ND LDD+ S DEEE +VN++LDEIGIEISGK+A APSA KG + +SA+K + E + QLKA Sbjct: 1 MASLF-KKKTVDDIIKDQNKELKGQQRAITRDRTALEKQEKQLEMEIKKMAKAGNKDACKVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASEDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKG-LPSASASKSTGISDEEIERQLKA 210
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917744|sp|Q6NXD2.1|CHM2B_DANRE (RecName: Full=Charged multivesicular body protein 2b; AltName: Full=Chromatin-modifying protein 2b; Short=CHMP2b) HSP 1 Score: 195.282 bits (495), Expect = 4.383e-62 Identity = 107/212 (50.47%), Postives = 144/212 (67.92%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M LF KK T+ + +++ ++ LR R++ RDR LE++EK+LEMEIKK AK G +D C VLAKQLVQ+RKQK RTY SS++ Q K M + +K+A AM T+KTM +NK M+P K Q +Q F KM+MTEEMMND LD++ +SGDEEE +VN++LDEIGIEISGK+A APSA + + ++ AK + E + QLKA Sbjct: 1 MTSLF-KKKTVDDVIKEQNKELRGTQRQIARDRTALEKQEKQLEMEIKKMAKTGNRDACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISGKMAHAPSAAR-KTPSAATAKADGISDEDIERQLKA 210
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917745|sp|Q5F3A2.1|CHM2B_CHICK (RecName: Full=Charged multivesicular body protein 2b; AltName: Full=Chromatin-modifying protein 2b; Short=CHMP2b) HSP 1 Score: 194.512 bits (493), Expect = 1.036e-61 Identity = 108/212 (50.94%), Postives = 142/212 (66.98%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M LF KK T+ + +++ +R LR R + RDR LE++E++LE+EIKK AK G K+ C VLAKQLVQLRKQK RTY SS++ Q K M + +K+A AM T+KTM +NK M+P K Q MQ F N KM MTEEM+ND LDD+ S +EEE +VN++LDEIGIEISGK+A APSA +G + +S +K + E + QLKA Sbjct: 1 MASLF-KKKTVDDIIKEQNRELRGTQRTITRDRAALEKQERQLELEIKKMAKTGNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMAKAPSAARG-LPSASTSKASTISDEEIERQLKA 210
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|85540939|sp|Q3SX42.1|CHM2B_BOVIN (RecName: Full=Charged multivesicular body protein 2b; AltName: Full=Chromatin-modifying protein 2b; Short=CHMP2b) HSP 1 Score: 186.808 bits (473), Expect = 8.599e-59 Identity = 107/212 (50.47%), Postives = 139/212 (65.57%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M LF KK T+ + +++ +R LR R + RDR LE++EK+LE+EIKK AK G K+ C VLAKQLV LRKQK RT+ SS++ Q K M + +K+A AM T+KTM +NK M+P K Q MQ F N KM MTEEM+ND LDD+ S DEEE +VN++LDEIGIEISGK+A APSA + S++ K + E + QLKA Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSL--PSASTSKSTISDEEIERQLKA 209
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917747|sp|Q8BJF9.1|CHM2B_MOUSE (RecName: Full=Charged multivesicular body protein 2b; AltName: Full=Chromatin-modifying protein 2b; Short=CHMP2b) HSP 1 Score: 186.422 bits (472), Expect = 1.388e-58 Identity = 107/212 (50.47%), Postives = 139/212 (65.57%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M LF KK T+ + +++ +R LR R + RDR LE++EK+LE+EIKK AK G K+ C VLAKQLV LRKQK RT+ SS++ Q K M + +K+A AM T+KTM +NK M+P K Q MQ F N KM MTEEM+ND LDD+ S DEEE +VN++LDEIGIEISGK+A APSA + S++ K + E + QLKA Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSL--PSASTSKATISDEEIERQLKA 209
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917746|sp|Q9UQN3.1|CHM2B_HUMAN (RecName: Full=Charged multivesicular body protein 2b; AltName: Full=CHMP2.5; AltName: Full=Chromatin-modifying protein 2b; Short=CHMP2b; AltName: Full=Vacuolar protein sorting-associated protein 2-2; Short=Vps2-2; Short=hVps2-2 >gi|73917748|sp|Q5RAV2.1|CHM2B_PONAB RecName: Full=Charged multivesicular body protein 2b; AltName: Full=Chromatin-modifying protein 2b; Short=CHMP2b) HSP 1 Score: 186.422 bits (472), Expect = 1.450e-58 Identity = 107/212 (50.47%), Postives = 139/212 (65.57%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M LF KK T+ + +++ +R LR R + RDR LE++EK+LE+EIKK AK G K+ C VLAKQLV LRKQK RT+ SS++ Q K M + +K+A AM T+KTM +NK M+P K Q MQ F N KM MTEEM+ND LDD+ S DEEE +VN++LDEIGIEISGK+A APSA + S++ K + E + QLKA Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSL--PSASTSKATISDEEIERQLKA 209
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|74851055|sp|Q54DB1.1|CM2A2_DICDI (RecName: Full=Charged multivesicular body protein 2a homolog 2; AltName: Full=Vacuolar protein-sorting-associated protein 2B) HSP 1 Score: 142.124 bits (357), Expect = 1.701e-41 Identity = 75/197 (38.07%), Postives = 125/197 (63.45%), Query Frame = 0 Query: 3 YLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQ 199 +LFGK+ T KE LR+N R L K RE+ R+R+ L+ +EKK+ ++IKK AK GQ + ++AK LV+ R Q+ Y +Q++ + + + + +A+AM +K M MN+ MN + + M EF ++KM+M EEMMND +D ++ + G+EE+ ++N++LDEIGI+++ ++ AP+ +G S A+K Q Sbjct: 2 FLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDAPTT----VGTSVASKHQ 194
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|75249519|sp|Q941D5.1|VPS2C_ARATH (RecName: Full=Vacuolar protein sorting-associated protein 2 homolog 3; Short=AtVPS2-3; AltName: Full=Charged multivesicular body protein 2 homolog 3; AltName: Full=ESCRT-III complex subunit VPS2 homolog 3) HSP 1 Score: 132.88 bits (333), Expect = 1.279e-37 Identity = 75/192 (39.06%), Postives = 122/192 (63.54%), Query Frame = 0 Query: 4 LFGKKPTMKEQLRDNDR----ALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIG 191 +F KKP +E LR++ R A R +++E+G L+ EEKKL +EIK+ AK+G + +LA+QL++LR+Q + +Q++G +AM A+ +A M +K M M+K M+P K + M+EF + +M+MT EMM+D++DD L E+E + + N++LDEIGI+I+ +++SAP KG+IG Sbjct: 3 IFTKKPNPREVLRESKREMTQATRGIEKEIG----SLQSEEKKLVLEIKRTAKSGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSSAP---KGKIG 187
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|910323110|ref|XP_013164582.1| (PREDICTED: charged multivesicular body protein 2b-B [Papilio xuthus] >gi|930652142|gb|KPI94483.1| Charged multivesicular body protein 2b-B [Papilio xuthus]) HSP 1 Score: 237.654 bits (605), Expect = 2.525e-76 Identity = 121/209 (57.89%), Postives = 158/209 (75.60%), Query Frame = 0 Query: 4 LFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 F K PT+KEQ R NDR LRK R++ RD++ LEREEKKLEMEIKK AK G D C +LAKQLVQLRKQK R Y A+S+I KAMGAN+ IA AMG T+KTMGN+NKV+NP ++ +DM+ F AN KM+MT+EM+++ LDD++ ESGDE+E + +VN++LDEIGIEISGK+A+APS + +IG S+ D ++ A LA+LK+ Sbjct: 3 FFKKAPTVKEQQRQNDRELRKAGRDLERDKVALEREEKKLEMEIKKMAKEGNNDGCKILAKQLVQLRKQKTRIYAANSKISSVQIHNKAMGANIAIAGAMGTTAKTMGNINKVLNPHQIAKDMEAFKQANAKMDMTDEMISETLDDIMDESGDEQETEGIVNQVLDEIGIEISGKMANAPSVARNKIGNSTT--DADKELMAQLAKLKS 209
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|1080049864|ref|XP_018566358.1| (charged multivesicular body protein 2b-B [Anoplophora glabripennis]) HSP 1 Score: 237.269 bits (604), Expect = 3.663e-76 Identity = 121/211 (57.35%), Postives = 156/211 (73.93%), Query Frame = 0 Query: 3 YLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKK-QDLDIEAMLAQLKA 212 + F KP K++ R+ DR LRKV R++ RDR Q+ER+EKKLE+EIKK A+ G D C +LAKQLVQLRKQKQR+Y A S+++G FQ KAMGANVK+A AMG KTM +MNK+M P ++ + F+ N KM MT+EM+ND LDDMLTESGDEEE D ++ ++LDEIGIEISGK+A P+ G+IGE S +K D +IEA LA+L+ Sbjct: 2 FNFWSKPDPKDEQREVDRQLRKVGRDIERDRRQIERDEKKLELEIKKLAREGNNDGCRLLAKQLVQLRKQKQRSYAAGSKVQGISFQNKAMGANVKLADAMGTAGKTMSDMNKLMKPEQLAATVNAFSRENMKMEMTDEMINDTLDDMLTESGDEEESDNIITQVLDEIGIEISGKMAYVPNPDSGKIGEGSKSKGLTDEEIEATLAKLRG 212
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|914098811|ref|NP_001298680.1| (charged multivesicular body protein 2b-B [Papilio polytes] >gi|389615141|dbj|BAM20561.1| charged multivesicular body protein 2b [Papilio polytes]) HSP 1 Score: 237.269 bits (604), Expect = 4.360e-76 Identity = 121/209 (57.89%), Postives = 158/209 (75.60%), Query Frame = 0 Query: 4 LFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 F K PT+KE R NDR LRK R++ RD++ LEREEKKLEMEIKK AK G D C +LAKQLVQLRKQK R Y A+S+I KAMGAN+ IA AMG T+KTMGN+NKV+NP ++ +DM+ F AN KM+MT+EM+++ LDD++ ESGDE+E + +VN++LDEIGIEISGK+A+APS + +IG+S A D ++ A LA+LK+ Sbjct: 3 FFKKAPTVKETQRQNDRELRKAGRDLDRDKVALEREEKKLEMEIKKMAKEGNNDGCKILAKQLVQLRKQKTRIYAANSKISSVQIHNKAMGANIAIAGAMGTTAKTMGNINKVLNPHQIARDMEAFKQANAKMDMTDEMISETLDDIMDESGDEQESEGIVNQVLDEIGIEISGKMANAPSVARNKIGDS--ATDADKELMAQLAKLKS 209
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|1130230310|ref|XP_019760264.1| (PREDICTED: charged multivesicular body protein 2b-B [Dendroctonus ponderosae] >gi|1130230312|ref|XP_019760265.1| PREDICTED: charged multivesicular body protein 2b-B [Dendroctonus ponderosae] >gi|478256720|gb|ENN76901.1| hypothetical protein YQE_06549, partial [Dendroctonus ponderosae]) HSP 1 Score: 235.728 bits (600), Expect = 1.673e-75 Identity = 123/213 (57.75%), Postives = 158/213 (74.18%), Query Frame = 0 Query: 1 MDYL-FGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 M +L F KP KE+ R+ D+ALRKV+R++ RDRL+LEREEKKLE EIKK AKAG ++ C +LAKQLVQ+RKQK R+Y ASS++ G FQ KAMGAN+K+A++MG KTM +MN +M P ++ + F N KM MT+EM+ND LDDMLTESGDEEE D +V ++LDEIGIE+SGK++ AP G+IG+ S D DIEA LA+LK Sbjct: 1 MSFLNFWSKPDPKEEQRETDKALRKVNRDLERDRLKLEREEKKLEQEIKKLAKAGDQEGCRILAKQLVQMRKQKTRSYAASSKVTGVQFQNKAMGANMKLAESMGVAGKTMADMNSLMKPEQLAATVNAFTKENMKMEMTDEMINDTLDDMLTESGDEEESDNIVTQVLDEIGIEMSGKMSGAPLPETGKIGQKSKG-LSDEDIEAQLAKLKG 212
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|1229729446|ref|XP_022127656.1| (charged multivesicular body protein 2b [Pieris rapae]) HSP 1 Score: 235.343 bits (599), Expect = 1.907e-75 Identity = 119/209 (56.94%), Postives = 156/209 (74.64%), Query Frame = 0 Query: 4 LFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 F K PT+KEQ R+NDR LRK R++ RD+ LEREEKKLEMEIKK AK G C +LAKQLVQLR QK R Y A+S+I KAMGANV IA AMG T+KTMG+MNK+MNP ++ ++M+ F AN KM MT+EM+++ LDD++ ES DEEE + ++N++LDEIGIE++GK+A+APS + ++GES+A D DI A LA+LK+ Sbjct: 3 FFKKPPTIKEQQRENDRELRKASRDLERDKAALEREEKKLEMEIKKMAKEGNNASCKILAKQLVQLRNQKTRIYSANSKISSVQIHNKAMGANVAIAGAMGTTAKTMGSMNKIMNPQQIAKNMEAFKHANAKMEMTDEMISETLDDIMNESDDEEETEGIINQVLDEIGIEVTGKMANAPSVSRNKVGESTA--DADKDIMAQLAKLKS 209 The following BLAST results are available for this feature:
BLAST of charged multivesicular body protein 2b vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of charged multivesicular body protein 2b vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of charged multivesicular body protein 2b vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold252_size238019:132832..135403- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold252_size238019-snap-gene-1.38 ID=maker-scaffold252_size238019-snap-gene-1.38|Name=charged multivesicular body protein 2b|organism=Tigriopus kingsejongensis|type=gene|length=2572bp|location=Sequence derived from alignment at scaffold252_size238019:132832..135403- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'charged multivesicular body protein 2b' has the following synonyms
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