charged multivesicular body protein 2b, maker-scaffold252_size238019-snap-gene-1.38 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of charged multivesicular body protein 2b vs. L. salmonis genes
Match: EMLSAG00000009635 (supercontig:LSalAtl2s:LSalAtl2s619:80485:81572:-1 gene:EMLSAG00000009635 transcript:EMLSAT00000009635 description:"maker-LSalAtl2s619-augustus-gene-0.7") HSP 1 Score: 282.722 bits (722), Expect = 4.931e-98 Identity = 144/213 (67.61%), Postives = 173/213 (81.22%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESS-AAKKQDLDIEAMLAQLKA 212 MD LFG+K T+KEQ++DNDR LRK +REV RDR +LE EEKKLE EIKKAAK+G K VCT+LAKQLV LRKQK RT+VASSQI AG+ AK M +NVKIA+AMGETS+TMG MNK M+P K+ +++F +AN+KMNMTEE+MNDA DD+L ES DE EE V+NK+LDEIGIEISGK+ +APSA K IGES+ K+D +IE MLAQLKA Sbjct: 1 MDSLFGRKKTLKEQVKDNDRDLRKANREVERDRKKLEMEEKKLEQEIKKAAKSGNKQVCTLLAKQLVNLRKQKNRTFVASSQISAAGYAAKGMASNVKIAEAMGETSRTMGQMNKAMDPKKLAGTLRDFTVANDKMNMTEEVMNDAFDDILGESDDEAEEQGVINKVLDEIGIEISGKMINAPSAGKDTIGESTKTTTKEDREIEEMLAQLKA 213
BLAST of charged multivesicular body protein 2b vs. L. salmonis genes
Match: EMLSAG00000001138 (supercontig:LSalAtl2s:LSalAtl2s118:399399:402184:1 gene:EMLSAG00000001138 transcript:EMLSAT00000001138 description:"maker-LSalAtl2s118-augustus-gene-4.15") HSP 1 Score: 110.923 bits (276), Expect = 1.538e-30 Identity = 68/184 (36.96%), Postives = 119/184 (64.67%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPS 184 M++LFG+K + E LR N RAL K RE+ R+R ++E++EKK+ +IKK AK GQ D ++AK LV+ R+ ++ + + I+ + + + + +A+AM ++ M NMN+ M ++ + MQEF +E M+M EEMM+D +DD L + DE+E D +V+++LDE+G++++ ++ P+ Sbjct: 1 MEWLFGRKMSPDEMLRKNQRALNKAMRELDRERTKMEQQEKKIIGDIKKMAKQGQMDAVRIMAKDLVRTRRYVKKFMLMRANIQAVSLKIQTLKSQNSMAEAMKGVTRAMQNMNRQMKLPQIQKIMQEFEKQSEIMDMKEEMMSDCIDDALGDDEDEDESDAIVSQVLDELGLQLNDQLKDVPA 184
BLAST of charged multivesicular body protein 2b vs. L. salmonis genes
Match: EMLSAG00000000626 (supercontig:LSalAtl2s:LSalAtl2s109:757972:765988:1 gene:EMLSAG00000000626 transcript:EMLSAT00000000626 description:"augustus_masked-LSalAtl2s109-processed-gene-7.1") HSP 1 Score: 86.6557 bits (213), Expect = 2.951e-21 Identity = 60/189 (31.75%), Postives = 100/189 (52.91%), Query Frame = 0 Query: 4 LFG--KKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQI 190 LFG K P KE++ + + LRK + R Q++REE K+ IK++AK G KD C VLA+++V RK + YVA + + Q K + V++A + ++++ M M K++ ++ MQE + K + EEMM D D+ E D+ +++ V+K+L E+ + APS + I Sbjct: 16 LFGRSKSPNPKERVNEWGKKLRKEGYNLDRQIRQIQREEAKVTRSIKESAKRGDKDSCRVLAREVVNSRKTVNKIYVAKANLSSVEMQMKNQASQVRLAGTLSQSTEVMQCMQKLIKLPEIAHTMQELSKEMMKAGIFEEMMEDTFDNEPEELEDDVQKE--VDKVLAELTEGDRKTMEKAPSVPQASI 202
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|182627647|sp|Q54GK9.2|CM2A1_DICDI (RecName: Full=Charged multivesicular body protein 2a homolog 1; AltName: Full=Vacuolar protein-sorting-associated protein 2A) HSP 1 Score: 76.6406 bits (187), Expect = 4.301e-16 Identity = 60/210 (28.57%), Postives = 110/210 (52.38%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQL 210 M + G K T +++L+D+ R L K RE+ R+ +L+ E++ +IK+ AKAG+ D +A LV+LR Q +R + + + + AN +A AM +K M MNK + +++ + M E+ +++ MTEEMM D + +EE D +++K++DE+ ++ K+ S ++S K +D ++ +L L Sbjct: 1 MSFFGGNKKTPEQELKDSKRELSKGQREMDRELNRLKIVEQEYIGKIKQLAKAGRNDEAKRMANDLVKLRGQMERMRATKTTLSAVSTKTTTIKANQTMANAMASATKAMSTMNKQTDLVQLQKTMMEYEKQTQRVEMTEEMMQDM----FEDDEVDEEADDILSKVVDEVCLDNYQKMPSVAQKDLPYSSKTSTFKTEDEELNKLLQSL 206
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|116241295|sp|Q58CS7.4|CHMP3_BOVIN (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein sorting-associated protein 24) HSP 1 Score: 74.3294 bits (181), Expect = 3.992e-15 Identity = 57/184 (30.98%), Postives = 100/184 (54.35%), Query Frame = 0 Query: 4 LFGK---KPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPS 184 LFGK KP KE + + +RK R V R ++REE+K++ +K AAK GQKDVC VLAK++++ RK + Y + + + K A +++A ++ ++++ M M ++ ++ M+E + K + EEM+ D + M + EE ++ +++IL EI +G + APS Sbjct: 3 LFGKTQEKPP-KELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEI---TAGALGKAPS 182
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917766|sp|Q5RAU5.3|CHMP3_PONAB (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein sorting-associated protein 24) HSP 1 Score: 74.3294 bits (181), Expect = 4.202e-15 Identity = 58/184 (31.52%), Postives = 101/184 (54.89%), Query Frame = 0 Query: 4 LFGK---KPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPS 184 LFGK KP KE + + +RK R V R ++REE+K++ +K AAK GQKDVC VLAK++++ RK + Y + + + K A +++A ++ ++++ M M ++ ++ M+E + K + EEM+ D + M + EEE ++ +++IL EI +G + APS Sbjct: 3 LFGKTQEKPP-KELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEI---TAGALGKAPS 182
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917764|sp|Q4R574.3|CHMP3_MACFA (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Vacuolar protein sorting-associated protein 24) HSP 1 Score: 73.9442 bits (180), Expect = 4.515e-15 Identity = 57/184 (30.98%), Postives = 100/184 (54.35%), Query Frame = 0 Query: 4 LFGK---KPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPS 184 LFGK KP KE + + +RK R V R ++REE+K++ +K AAK GQKDVC VLAK++++ RK + Y + + + K A +++A ++ ++++ M M ++ ++ M+E + K + EEM+ D + M + EE ++ +++IL EI +G + APS Sbjct: 3 LFGKTQEKPP-KELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIRATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEI---TAGALGKAPS 182
BLAST of charged multivesicular body protein 2b vs. SwissProt
Match: gi|73917763|sp|Q9Y3E7.3|CHMP3_HUMAN (RecName: Full=Charged multivesicular body protein 3; AltName: Full=Chromatin-modifying protein 3; AltName: Full=Neuroendocrine differentiation factor; AltName: Full=Vacuolar protein sorting-associated protein 24; Short=hVps24) HSP 1 Score: 73.9442 bits (180), Expect = 5.432e-15 Identity = 58/184 (31.52%), Postives = 101/184 (54.89%), Query Frame = 0 Query: 4 LFGK---KPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPS 184 LFGK KP KE + + +RK R V R ++REE+K++ +K AAK GQKDVC VLAK++++ RK + Y + + + K A +++A ++ ++++ M M ++ ++ M+E + K + EEM+ D + M + EEE ++ +++IL EI +G + APS Sbjct: 3 LFGKTQEKPP-KELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEI---TAGALGKAPS 182
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|225708732|gb|ACO10212.1| (Charged multivesicular body protein 2b [Caligus rogercresseyi]) HSP 1 Score: 282.337 bits (721), Expect = 6.644e-94 Identity = 142/215 (66.05%), Postives = 173/215 (80.47%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESS---AAKKQDLDIEAMLAQLKA 212 MD LFG+K TMKEQ+RDNDR LRK +R++ RDR +LE EEKKLE EIKKAAK+G K VCT+LAKQLV +RKQK RT+VASSQI AG+ AK M +N KIA+AMGETSKTMG MNKVM+P K+ M++F +ANEKMNMTEE+MNDA DD+L ES DE EE V+NK+LD IGIEIS K+ +APS KG IGE + ++ K+D +IEAMLA+LK+ Sbjct: 1 MDSLFGRKKTMKEQIRDNDRDLRKANRDIERDRNKLEMEEKKLEAEIKKAAKSGNKQVCTILAKQLVNIRKQKNRTFVASSQISAAGYAAKGMASNFKIAEAMGETSKTMGQMNKVMDPRKLAGTMRDFTVANEKMNMTEEIMNDAFDDILGESDDESEEQGVINKVLDAIGIEISDKLINAPSTSKGAIGEPAKKVSSSKEDREIEAMLAELKS 215
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|225712084|gb|ACO11888.1| (Charged multivesicular body protein 2b [Lepeophtheirus salmonis]) HSP 1 Score: 281.182 bits (718), Expect = 2.069e-93 Identity = 144/213 (67.61%), Postives = 173/213 (81.22%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESS-AAKKQDLDIEAMLAQLKA 212 MD LFG+K T+KEQ++DNDR LRK +REV RDR +LE EEKKLE EIKKAAK+G K VCT+LAKQLV LRKQK RT+VASSQI AG+ AK M +NVKIA+AMGETS+TMG MNK M+P K+ +++F +AN+KMNMTEE+MNDA DD+L ES DE EE V+NK+LDEIGIEISGK+ +APSA K IGES+ K+D +IE MLAQLKA Sbjct: 1 MDSLFGRKKTLKEQVKDNDRDLRKANREVERDRKKLEMEEKKLEQEIKKAAKSGNKQVCTLLAKQLVNLRKQKNRTFVASSQISAAGYAAKGMVSNVKIAEAMGETSRTMGQMNKAMDPKKLAGTLRDFTVANDKMNMTEEVMNDAFDDILGESDDEAEEQGVINKVLDEIGIEISGKMINAPSAGKDTIGESTKTTTKEDREIEEMLAQLKA 213
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|225708870|gb|ACO10281.1| (Charged multivesicular body protein 2b [Caligus rogercresseyi]) HSP 1 Score: 281.182 bits (718), Expect = 2.339e-93 Identity = 141/215 (65.58%), Postives = 173/215 (80.47%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESS---AAKKQDLDIEAMLAQLKA 212 MD LFG+K TMKEQ+RDNDR LRK +R++ RDR +LE EEKKLE EIKKAAK+G K VCT+LAKQLV +RKQK RT+VASSQI AG+ AK +N KIA+AMGETSKTMG MNKVM+P K+ M++F +ANEKMNMTEE+MNDA DD+L ES DE EE V+N++LDEIGIEIS K+ +APS KG IGE + ++ K+D +IEAMLA+LK+ Sbjct: 1 MDSLFGRKKTMKEQIRDNDRDLRKANRDIERDRNKLEMEEKKLEAEIKKAAKSGNKQVCTILAKQLVNIRKQKNRTFVASSQISAAGYAAKGTASNFKIAEAMGETSKTMGQMNKVMDPRKLAGTMRDFTVANEKMNMTEEIMNDAFDDILGESDDESEEQGVINQVLDEIGIEISDKLINAPSTSKGAIGEPAKKVSSSKEDREIEAMLAELKS 215
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|225709544|gb|ACO10618.1| (Charged multivesicular body protein 2b [Caligus rogercresseyi]) HSP 1 Score: 280.796 bits (717), Expect = 2.818e-93 Identity = 142/215 (66.05%), Postives = 172/215 (80.00%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESS---AAKKQDLDIEAMLAQLKA 212 MD LFG+K TMKEQ+RDNDR LRK +R++ RDR +LE EEKKLE EIKKAAK+G K VCT+LAKQLV +RKQK RT+VASSQI AG+ AK M +N KIA+AMGETSKTMG MNKVM+P K+ M +F +ANEKMNM EE+MNDA DD+L ES DE EE V+NK+LDEIGIEIS K+ +APS KG IGE + ++ K+D +IEAMLA+LK+ Sbjct: 1 MDSLFGRKKTMKEQIRDNDRDLRKANRDIERDRNKLEMEEKKLEAEIKKAAKSGNKQVCTILAKQLVNIRKQKNRTFVASSQISAAGYAAKGMASNFKIAEAMGETSKTMGQMNKVMDPRKLAGTMGDFTVANEKMNMAEEIMNDAFDDILGESDDESEEQGVINKVLDEIGIEISDKLINAPSTSKGAIGEPAKKVSSSKEDREIEAMLAELKS 215
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|957849665|ref|XP_014675366.1| (PREDICTED: charged multivesicular body protein 2b-like [Priapulus caudatus]) HSP 1 Score: 263.462 bits (672), Expect = 1.738e-86 Identity = 129/207 (62.32%), Postives = 161/207 (77.78%), Query Frame = 0 Query: 4 LFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQL 210 LFGK PT KEQ+R DRALR +R++ +DR +LER EK+LE EIKKAA+AG K CTVLAKQLVQLRKQK RTY S++ G Q KAM +N+ +A AM T+KTM MNK M+P+K+ + M+EF MAN KM M+EEM+ND LDD+LTESGDEEEED +V ++LDEIGIE++GK+A+AP+A KGQ+GE S A+ D DIE LAQL Sbjct: 3 LFGKSPTPKEQMRKQDRALRSTNRDIDKDRRELERREKQLESEIKKAAQAGNKQACTVLAKQLVQLRKQKTRTYTMQSRVSAVGAQGKAMSSNMAMANAMSTTTKTMQGMNKTMDPMKVAKTMKEFEMANTKMEMSEEMINDTLDDILTESGDEEEEDAIVTQVLDEIGIEMTGKVAAAPTAGKGQLGELSKAEVTDADIERQLAQL 209
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|1233197236|ref|XP_022198306.1| (charged multivesicular body protein 2b isoform X1 [Nilaparvata lugens] >gi|1233197239|ref|XP_022198307.1| charged multivesicular body protein 2b isoform X2 [Nilaparvata lugens]) HSP 1 Score: 250.751 bits (639), Expect = 2.452e-81 Identity = 133/213 (62.44%), Postives = 163/213 (76.53%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAK-KQDLDIEAMLAQLKA 212 MD+LFGKK T KEQ R+NDRALRKV R++ RDR QLEREEKK+EMEIKK K G K+ T+LAKQLVQLRKQK RT+ A S+++ G + KAMGAN+K+A+AM T+KTM NMN VM P KM DM F+ A KM+MTEEM+ND LDD+L E G EEE D VV ++LDEIGIEISGK++ APSA K +IG S ++ D +IEA LA+L+A Sbjct: 1 MDFLFGKKVTPKEQQRENDRALRKVGRDIERDRQQLEREEKKIEMEIKKLVKEGNKEGYTILAKQLVQLRKQKNRTFAAGSKVQNIGVKNKAMGANMKLAEAMSTTAKTMQNMNDVMKPEKMAADMSNFSKAAMKMDMTEEMINDTLDDILDEDGLEEESDHVVQQVLDEIGIEISGKVSEAPSAVKDRIGAPSKSRVPTDEEIEAQLAKLRA 213
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|768432322|ref|XP_011557480.1| (PREDICTED: charged multivesicular body protein 2b-B [Plutella xylostella]) HSP 1 Score: 247.284 bits (630), Expect = 3.372e-80 Identity = 127/209 (60.77%), Postives = 160/209 (76.56%), Query Frame = 0 Query: 4 LFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 F K PT+KE R NDR LRK RE+ RD+ LEREEKKLEMEIKK A G + C +LAKQLVQLRKQK R Y A+S+I G Q KAMGAN+ IA AMG T++TMGNMNKVMNP ++ +DM+ F MAN KM+MT+EM++D LDD++ ESGDEEE + +VN++LDEIGIEISGK+A APS +G++G S+AA D ++ A LA+LK+ Sbjct: 3 FFKKAPTVKELQRQNDRELRKAGRELDRDKANLEREEKKLEMEIKKLANEGNGEGCKILAKQLVQLRKQKTRIYAANSKIAGVSTQNKAMGANIAIANAMGTTARTMGNMNKVMNPQQIAKDMEAFKMANAKMDMTDEMISDTLDDIMGESGDEEETEGIVNQVLDEIGIEISGKMADAPSVARGKLGASTAA---DKELMAQLAKLKS 208
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|919058249|ref|XP_013411003.1| (charged multivesicular body protein 2b [Lingula anatina]) HSP 1 Score: 243.817 bits (621), Expect = 8.127e-79 Identity = 123/208 (59.13%), Postives = 161/208 (77.40%), Query Frame = 0 Query: 4 LFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLK 211 LF KKPT++EQLR NDR +R+ R++ RDR QLE++EK++E+EIKKAAK G K T+LAKQLVQLRKQK +++ S+I+G G Q K M +N+K+A AMG T+K M +MNKVM+P K + MQ+F + KM+M+EEM+ND LD++ ESGDEEE+D +V ++LDEIGIEISGK+A APSAHKG++GESS A D DIE LA LK Sbjct: 3 LFKKKPTVQEQLRQNDRQIRRTQRDLERDRGQLEKQEKQIEIEIKKAAKRGDKQTATILAKQLVQLRKQKTKSFAVGSRIQGVGHQTKMMHSNMKMANAMGSTTKAMQSMNKVMDPQKTMKTMQDFTKESMKMDMSEEMINDTLDEIFDESGDEEEQDAIVTQVLDEIGIEISGKMADAPSAHKGKLGESSKA---DQDIERQLAALK 207
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|512930562|ref|XP_004932090.1| (charged multivesicular body protein 2b [Bombyx mori] >gi|1200737142|ref|XP_021207603.1| charged multivesicular body protein 2b [Bombyx mori] >gi|1200737144|ref|XP_021207604.1| charged multivesicular body protein 2b [Bombyx mori]) HSP 1 Score: 243.432 bits (620), Expect = 1.550e-78 Identity = 126/209 (60.29%), Postives = 155/209 (74.16%), Query Frame = 0 Query: 4 LFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 F K PT+KE R NDR LRK R++ RD+ LEREEKKLEMEIKK AK G D C +LAKQLVQLRKQK R Y A+S+I KAMGAN+ IA AMG T+KTMGNMNKVMNP ++ +DM+ F AN KM+MT+EM++D LDD++ ESGDEEE +VN++LDEIGIEISGK+A APS + +IG+S+ D DI A LA+LK+ Sbjct: 4 FFSKAPTVKEIQRQNDRDLRKAGRDLERDKANLEREEKKLEMEIKKMAKEGNNDGCKILAKQLVQLRKQKNRIYAANSKISSVQIHNKAMGANIAIAGAMGTTAKTMGNMNKVMNPHQIAKDMEAFKQANAKMDMTDEMISDTLDDIMDESGDEEESAGIVNQVLDEIGIEISGKMADAPSVSRNKIGQSTT--DADKDIMAQLAKLKS 210
BLAST of charged multivesicular body protein 2b vs. nr
Match: gi|751442213|ref|XP_011195738.1| (PREDICTED: charged multivesicular body protein 2b [Zeugodacus cucurbitae]) HSP 1 Score: 241.891 bits (616), Expect = 5.048e-78 Identity = 120/212 (56.60%), Postives = 160/212 (75.47%), Query Frame = 0 Query: 1 MDYLFGKKPTMKEQLRDNDRALRKVDREVGRDRLQLEREEKKLEMEIKKAAKAGQKDVCTVLAKQLVQLRKQKQRTYVASSQIKGAGFQAKAMGANVKIAQAMGETSKTMGNMNKVMNPIKMGQDMQEFAMANEKMNMTEEMMNDALDDMLTESGDEEEEDLVVNKILDEIGIEISGKIASAPSAHKGQIGESSAAKKQDLDIEAMLAQLKA 212 + +FGKKPT+KEQ RDND+ LRK R++ R+R +L+ EE+KL+ EIKKAA G DVC +LAKQLV++RKQK RT+ A+S+I G+Q K +G N+ +A AMG T+KTMG+MNKVM P + ++++F AN M MT+EM+ND LDDML ESGDEEE D +VNK+LDEIGIEISGK+A+ PS G + +SS +K DIEA LA+L++ Sbjct: 2 FNNIFGKKPTVKEQQRDNDKNLRKATRDIERERRKLDEEERKLQQEIKKAAAQGNNDVCRILAKQLVEIRKQKARTFAATSKITSIGYQNKNIGTNIVLADAMGTTAKTMGDMNKVMRPEGIAANLRDFQKANMHMEMTDEMINDTLDDMLNESGDEEESDAIVNKVLDEIGIEISGKMANIPSTGSGDLEKSSRTEK---DIEAQLAKLRS 210 The following BLAST results are available for this feature:
BLAST of charged multivesicular body protein 2b vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of charged multivesicular body protein 2b vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of charged multivesicular body protein 2b vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold252_size238019:132832..135403- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold252_size238019-snap-gene-1.38 ID=maker-scaffold252_size238019-snap-gene-1.38|Name=charged multivesicular body protein 2b|organism=Tigriopus kingsejongensis|type=gene|length=2572bp|location=Sequence derived from alignment at scaffold252_size238019:132832..135403- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'charged multivesicular body protein 2b' has the following synonyms
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