fumarate hydratase, maker-scaffold2530_size14785-snap-gene-0.0 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of fumarate hydratase vs. L. salmonis genes
Match: EMLSAG00000011633 (supercontig:LSalAtl2s:LSalAtl2s806:113709:119311:1 gene:EMLSAG00000011633 transcript:EMLSAT00000011633 description:"maker-LSalAtl2s806-augustus-gene-0.29") HSP 1 Score: 75.8702 bits (185), Expect = 8.555e-19 Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 0
Query: 2 MASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
+ASGPR G+GE+ +P NEPGSSIMPGKVNPTQ EA+TMV AQ M
Sbjct: 604 LASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEAITMVAAQVM 647
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931469|sp|Q81SA0.1|FUMC_BACAN (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 84.3445 bits (207), Expect = 1.997e-20 Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
+ASGPRSG+GEIIIPANEPGSSIMPGKVNPTQ+EALTMV AQ M
Sbjct: 295 WLASGPRSGLGEIIIPANEPGSSIMPGKVNPTQSEALTMVVAQVM 339
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931463|sp|Q81F85.1|FUMC_BACCR (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 84.3445 bits (207), Expect = 2.036e-20 Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
+ASGPRSG+GEIIIPANEPGSSIMPGKVNPTQ+EALTMV AQ M
Sbjct: 295 WLASGPRSGLGEIIIPANEPGSSIMPGKVNPTQSEALTMVVAQVM 339
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931629|sp|Q9CMK1.1|FUMC_PASMU (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 82.4185 bits (202), Expect = 1.173e-19 Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
++ASGPRSGIGEI+IP NEPGSSIMPGKVNPTQ EA+TMVCAQ +
Sbjct: 297 LLASGPRSGIGEILIPENEPGSSIMPGKVNPTQCEAMTMVCAQVL 341
BLAST of fumarate hydratase vs. SwissProt
Match: gi|259016350|sp|O94552.3|FUMH_SCHPO (RecName: Full=Fumarate hydratase, mitochondrial; Short=Fumarase; Flags: Precursor) HSP 1 Score: 80.4925 bits (197), Expect = 4.790e-19 Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
Query: 2 MASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
+ SGPR G+GE+I+PANEPGSSIMPGKVNPTQ EALTMVCAQ M
Sbjct: 353 LGSGPRCGLGELILPANEPGSSIMPGKVNPTQCEALTMVCAQVM 396
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931616|sp|Q929E8.1|FUMC_LISIN (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 80.4925 bits (197), Expect = 5.073e-19 Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
++ASGPRSGIGE+ +PANEPGSSIMPGKVNPTQ EA+TMV AQ M
Sbjct: 290 LLASGPRSGIGELTLPANEPGSSIMPGKVNPTQCEAITMVAAQVM 334
BLAST of fumarate hydratase vs. SwissProt
Match: gi|6016063|sp|P71384.1|FUMC_HAEIN (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 80.4925 bits (197), Expect = 5.298e-19 Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQ 43
++ASGPRSGIGEI+IP NEPGSSIMPGKVNPTQ E +TMVCAQ
Sbjct: 297 LLASGPRSGIGEILIPENEPGSSIMPGKVNPTQCEXMTMVCAQ 339
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931417|sp|Q7VKC9.1|FUMC_HAEDU (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 80.1073 bits (196), Expect = 7.931e-19 Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
++ASGPRSGIGEI+IP NEPGSSIMPGKVNPTQ EA+TMV AQ +
Sbjct: 297 LLASGPRSGIGEILIPENEPGSSIMPGKVNPTQCEAMTMVAAQVL 341
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931610|sp|Q8Y551.1|FUMC_LISMO (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 79.7221 bits (195), Expect = 8.143e-19 Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
++ASGPRSGIGE+ IPANEPGSSIMPGKVNPTQ EA+TMV AQ M
Sbjct: 290 LLASGPRSGIGELEIPANEPGSSIMPGKVNPTQCEAITMVAAQVM 334
BLAST of fumarate hydratase vs. SwissProt
Match: gi|39931506|sp|Q83CL8.2|FUMC_COXBU (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 79.337 bits (194), Expect = 1.203e-18 Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0
Query: 2 MASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
+ASGPR GIGEI+IP NEPGSSIMPGKVNPTQ+EA+TMVC Q +
Sbjct: 295 LASGPRCGIGEIVIPENEPGSSIMPGKVNPTQSEAMTMVCVQVI 338
BLAST of fumarate hydratase vs. SwissProt
Match: gi|7404369|sp|P07343.2|FUMC_BACSU (RecName: Full=Fumarate hydratase class II; Short=Fumarase C; AltName: Full=Aerobic fumarase; AltName: Full=Iron-independent fumarase) HSP 1 Score: 79.337 bits (194), Expect = 1.244e-18 Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
Query: 2 MASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
+ASGPR GIGEI+IP NEPGSSIMPGKVNPTQ+EALTM+ AQ M
Sbjct: 296 LASGPRCGIGEIVIPENEPGSSIMPGKVNPTQSEALTMIAAQIM 339
BLAST of fumarate hydratase vs. nr
Match: gi|1309008609|gb|PKP08984.1| (class II fumarate hydratase, partial [Bacteroidetes bacterium HGW-Bacteroidetes-3]) HSP 1 Score: 91.6633 bits (226), Expect = 3.969e-21 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGE+IIPANEPGSSIMPGKVNPTQAEALTMVCAQ M
Sbjct: 141 MMASGPRSGIGELIIPANEPGSSIMPGKVNPTQAEALTMVCAQVM 185
BLAST of fumarate hydratase vs. nr
Match: gi|653175050|ref|WP_027418006.1| (class II fumarate hydratase [Crocinitomix catalasitica]) HSP 1 Score: 92.0485 bits (227), Expect = 1.031e-20 Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQ M
Sbjct: 298 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQVM 342
BLAST of fumarate hydratase vs. nr
Match: gi|1119874754|ref|WP_072763529.1| (class II fumarate hydratase [Arenibacter nanhaiticus] >gi|1110165474|emb|SHI75656.1| fumarase, class II [Arenibacter nanhaiticus]) HSP 1 Score: 91.6633 bits (226), Expect = 1.466e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQ+EALTMVCAQ M
Sbjct: 298 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQSEALTMVCAQVM 342
BLAST of fumarate hydratase vs. nr
Match: gi|1085072835|gb|OGS72315.1| (fumarate hydratase, class II [Flavobacteria bacterium RIFCSPLOWO2_12_FULL_35_11]) HSP 1 Score: 91.6633 bits (226), Expect = 1.686e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGE+IIPANEPGSSIMPGKVNPTQAEALTMVCAQ M
Sbjct: 298 MMASGPRSGIGELIIPANEPGSSIMPGKVNPTQAEALTMVCAQVM 342
BLAST of fumarate hydratase vs. nr
Match: gi|652381957|ref|WP_026777887.1| (class II fumarate hydratase [Polaribacter sp. Hel_I_88]) HSP 1 Score: 91.6633 bits (226), Expect = 1.726e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEA+TMVCAQ M
Sbjct: 299 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEAITMVCAQVM 343
BLAST of fumarate hydratase vs. nr
Match: gi|974229246|gb|KUO69699.1| (class II fumarate hydratase [Lutibacter sp. BRH_c52]) HSP 1 Score: 91.6633 bits (226), Expect = 1.826e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGE+IIPANEPGSSIMPGKVNPTQAEALTMVCAQ M
Sbjct: 298 MMASGPRSGIGELIIPANEPGSSIMPGKVNPTQAEALTMVCAQVM 342
BLAST of fumarate hydratase vs. nr
Match: gi|1043035582|ref|WP_065318185.1| (class II fumarate hydratase [Polaribacter vadi] >gi|1042758535|gb|OBY65407.1| class II fumarate hydratase [Polaribacter vadi] >gi|1078669159|gb|AOW16266.1| fumarate hydratase, class II [Polaribacter vadi]) HSP 1 Score: 91.2781 bits (225), Expect = 1.964e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEA+TMVCAQ M
Sbjct: 299 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEAITMVCAQVM 343
BLAST of fumarate hydratase vs. nr
Match: gi|1148665304|ref|WP_077405551.1| (class II fumarate hydratase [Cellulophaga sp. W5C]) HSP 1 Score: 91.2781 bits (225), Expect = 2.057e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEA+TMVCAQ M
Sbjct: 298 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEAITMVCAQVM 342
BLAST of fumarate hydratase vs. nr
Match: gi|503387606|ref|WP_013622267.1| (MULTISPECIES: class II fumarate hydratase [Cellulophaga] >gi|324323059|gb|ADY30524.1| Fumarate hydratase class II [Cellulophaga lytica DSM 7489] >gi|584429287|gb|EWH13955.1| class II fumarate hydratase [Cellulophaga geojensis KL-A] >gi|682034390|gb|AIM61514.1| fumarate hydratase [Cellulophaga lytica] >gi|1130023497|gb|APU11407.1| class II fumarate hydratase [Cellulophaga lytica] >gi|1214876355|emb|SNQ43506.1| Fumarate hydratase, class II [Cellulophaga lytica]) HSP 1 Score: 91.2781 bits (225), Expect = 2.057e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEA+TMVCAQ M
Sbjct: 298 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEAITMVCAQVM 342
BLAST of fumarate hydratase vs. nr
Match: gi|1301726205|ref|WP_100896173.1| (class II fumarate hydratase [Algibacter sp. RHA_19] >gi|1294382394|gb|PKB44581.1| fumarase class II [Algibacter sp. RHA_19]) HSP 1 Score: 91.2781 bits (225), Expect = 2.078e-20 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
Query: 1 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEALTMVCAQAM 45
MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEA+TMVCAQ M
Sbjct: 298 MMASGPRSGIGEIIIPANEPGSSIMPGKVNPTQAEAITMVCAQVM 342 The following BLAST results are available for this feature:
BLAST of fumarate hydratase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of fumarate hydratase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of fumarate hydratase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2530_size14785:907..1399+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold2530_size14785-snap-gene-0.0 ID=maker-scaffold2530_size14785-snap-gene-0.0|Name=fumarate hydratase|organism=Tigriopus kingsejongensis|type=gene|length=493bp|location=Sequence derived from alignment at scaffold2530_size14785:907..1399+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'fumarate hydratase' has the following synonyms
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