abc c2 partial, maker-scaffold2698_size13172-snap-gene-0.4 (gene) Tigriopus kingsejongensis

Overview


Name	abc c2 partial
Unique Name	maker-scaffold2698_size13172-snap-gene-0.4
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25")

HSP 1 Score: 174.096 bits (440), Expect = 5.710e-52
Identity = 82/116 (70.69%), Postives = 97/116 (83.62%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDAN 116
            L DGL+  V EGG NLSVGQRQLICLARA+LRKT++L+LDEATAA+DLETDDLIQ+TIR +F+  TVLTIAHR+NTIMD +RIMVLD G I EFD P+NLL N  S+FY +  D+N
Sbjct: 1402 LGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLANPDSMFYSLVNDSN 1517

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 160.614 bits (405), Expect = 2.916e-47
Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L+DGL + VSEGG+NLS+GQRQLICLARALLR+T+VLILDEATAAVDLETD+LIQ TIR +F+  TV+TIAHRLNTIMDY +I+VL  G+  E+ +   LL +  S FY M  DA L
Sbjct: 1442 LKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADKKSQFYSMCSDAGL 1558

HSP 2 Score: 47.3654 bits (111), Expect = 1.408e-7
Identity = 30/106 (28.30%), Postives = 53/106 (50.00%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGC----TVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLK 102
            L  G   ++ E G NLS GQ+Q + LARA+   + + +LD+  +AVD      I   +     G     T + + H +  +   D+I+V+  G++ E  + + LL+
Sbjct:  746 LPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLR 851

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4")

HSP 1 Score: 158.303 bits (399), Expect = 2.162e-46
Identity = 76/117 (64.96%), Postives = 91/117 (77.78%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L+DGL+H +SEGG NLS GQRQL+CLARALLR  K+LILDEATAAVD ETD+ IQ TIR  F  CT+LTIAHRL TI+DYD+I+VLDKG + EF SP  L  N+ S+F+ M   A +
Sbjct: 1281 LKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHSMINAAGI 1397

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 151.754 bits (382), Expect = 4.154e-44
Identity = 71/116 (61.21%), Postives = 91/116 (78.45%), Query Frame = 0

Query:    2 EDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            EDGL   ++E G+N+S+GQRQLICLARALLRK KVLI+DEATAAVD ETD LIQ  I+  F+  TVLTIAHRL T++DY +I+V+D G I E+DSP+NLL ++ S FY M  ++ +
Sbjct: 1872 EDGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLSDSSSTFYKMCLNSGI 1987

HSP 2 Score: 47.7506 bits (112), Expect = 1.217e-7
Identity = 33/102 (32.35%), Postives = 52/102 (50.98%), Query Frame = 0

Query:    4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLE-TDDLIQTTIRKQ--FQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLK 102
            G S ++ E G NLS GQ+Q I LARA+  ++ +  LD+  A VD      L +  I      +G T + + H L+ +   D I  L  G+I E  + + L++
Sbjct: 1262 GDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELME 1363

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000000752 (supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 gene:EMLSAG00000000752 transcript:EMLSAT00000000752 description:"maker-LSalAtl2s111-augustus-gene-1.10")

HSP 1 Score: 145.206 bits (365), Expect = 7.319e-42
Identity = 69/111 (62.16%), Postives = 85/111 (76.58%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGM 111
            LE GL  +VSEGG+N SVGQRQL CLARA+LRK KVLI+DEATA VD  TD LIQ  IR +F+ CTV TIAHRL T+MD DRI+V+  G+I+E  +P +LL +  ++FY M
Sbjct: 1465 LEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELGAPLDLLSDPSNIFYQM 1575

HSP 2 Score: 84.7297 bits (208), Expect = 1.099e-20
Identity = 50/111 (45.05%), Postives = 61/111 (54.95%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGM 111
            L  GL   V E G N SVGQRQL CLA A+LR+ KVLI+DEATA VD  TD LIQ  IRK+F+ CT                          EF +P++LLK+ ++L   M
Sbjct:  171 LGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLIQEAIRKEFKDCT--------------------------EFGTPKDLLKDPNNLLSRM 255

HSP 3 Score: 46.9802 bits (110), Expect = 2.097e-7
Identity = 34/109 (31.19%), Postives = 55/109 (50.46%), Query Frame = 0

Query:    3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLET-DDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDK-GQIREFDSPENLLKNTHSLFY 109
            DG    V E G +LS GQ+  I LAR +     + ILD+  +AVD      L  T I+K     TV+ + H+L  + + + I++L+  G+I    + E L+  +  + Y
Sbjct:  828 DGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVDPHVGQQLFDTCIQKFLSDKTVILVTHQLQFLKNANNIILLNSDGEIEASGTYEKLMSQSGFVTY 936

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4")

HSP 1 Score: 112.849 bits (281), Expect = 1.666e-30
Identity = 52/105 (49.52%), Postives = 76/105 (72.38%), Query Frame = 0

Query:    4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLF 108
            GL   + +GG +LS+GQ+QL+CLARA++   KV+ +DEATA+VD ETD LI+  ++  F   TV+TIAHR+ T+++ DRI V+  GQI E   PE+L+K+ +S F
Sbjct: 1344 GLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKSPNSEF 1448

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000000745 (supercontig:LSalAtl2s:LSalAtl2s111:261767:264074:1 gene:EMLSAG00000000745 transcript:EMLSAT00000000745 description:"maker-LSalAtl2s111-snap-gene-2.13")

HSP 1 Score: 94.3597 bits (233), Expect = 3.260e-26
Identity = 51/107 (47.66%), Postives = 62/107 (57.94%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSL 107
            L  GL  +V++GG N S+GQRQLI                         TD LIQ  IR +F  CTVLTIAHRLNT+MD DR++VL  G+I EFD P  LL+N H+L
Sbjct:   24 LNGGLDAQVTDGGSNFSIGQRQLI-------------------------TDSLIQEAIRIKFSKCTVLTIAHRLNTVMDSDRMLVLSDGRIEEFDEPHTLLQNDHNL 105

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2")

HSP 1 Score: 98.2117 bits (243), Expect = 2.039e-25
Identity = 45/113 (39.82%), Postives = 78/113 (69.03%), Query Frame = 0

Query:    3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDA 115
            DGL   V+E GDN S+GQRQ + + +ALLR+ +V+ILDE+T+A+D   +  +  T+ + F+  T++++AHRL+ I++Y+R++V+ +G+I E  +P+ LLK     F  + + A
Sbjct: 1774 DGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGFFSALWRAA 1886

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18")

HSP 1 Score: 83.9593 bits (206), Expect = 2.235e-20
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 0

Query:    3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIRE 93
            DG S  + E G  +S GQ+Q I +ARALL+   +LILDEAT+A+D E++ ++Q  + K  +G T L IAHRL+TI + D I V+DKG + E
Sbjct:  561 DGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAE 651

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BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 78.1814 bits (191), Expect = 2.150e-18
Identity = 39/100 (39.00%), Postives = 65/100 (65.00%), Query Frame = 0

Query:    9 VSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLF 108
            V E G  LS GQ+Q I +ARAL+R   +L+LDEA++A+D +++ ++Q+ + K  +G T + +AHRL+TI   D I+V+  G   ++ + E+L  N   L+
Sbjct:  378 VGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLY 477

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BLAST of abc c2 partial vs. SwissProt
Match: gi|296439301|sp|P33527.3|MRP1_HUMAN (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter)

HSP 1 Score: 183.341 bits (464), Expect = 1.089e-53
Identity = 86/117 (73.50%), Postives = 102/117 (87.18%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L D L H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF+ CTVLTIAHRLNTIMDY R++VLDKG+I+E+ +P +LL+    LFY MAKDA L
Sbjct: 1415 LPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEYGAPSDLLQQ-RGLFYSMAKDAGL 1530

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BLAST of abc c2 partial vs. SwissProt
Match: gi|75072869|sp|Q864R9.1|MRP1_MACFA (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter)

HSP 1 Score: 182.185 bits (461), Expect = 2.556e-53
Identity = 85/117 (72.65%), Postives = 102/117 (87.18%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L D L H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF+ CTVLTIAHRLNTIMDY R++VLDKG+I+E+ +P +LL+    LFY MA+DA L
Sbjct: 1415 LPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEYGAPSDLLQQ-RGLFYNMARDAGL 1530

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BLAST of abc c2 partial vs. SwissProt
Match: gi|6016599|sp|O88563.1|MRP3_RAT (RecName: Full=Canalicular multispecific organic anion transporter 2; AltName: Full=ATP-binding cassette sub-family C member 3; AltName: Full=MRP-like protein 2; Short=MLP-2; AltName: Full=Multidrug resistance-associated protein 3)

HSP 1 Score: 182.185 bits (461), Expect = 3.257e-53
Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 0

Query:    4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118
            GL  + SEGGDNLSVGQRQL+CLARALLRK++VL+LDEATAA+DLETDDLIQ TIR QF+ CTVLTIAHRLNTIMDY+R++VLDKG + EFDSP NL+     +FYGMAKDA L 
Sbjct: 1409 GLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIA-AGGIFYGMAKDAGLA 1522

HSP 2 Score: 50.0618 bits (118), Expect = 5.148e-7
Identity = 35/110 (31.82%), Postives = 52/110 (47.27%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTI---RKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSL 107
            L  G   ++ E G NLS GQRQ + LARA+     + +LD+  +AVD      I   +        G T + + H ++ +   D I+VL  GQI E      LL++  S 
Sbjct:  734 LPGGDQTEIGEKGINLSGGQRQRVSLARAVYSDANIFLLDDPLSAVDSHVAKHIFDQVIGPEGVLAGKTRVLVTHGISFLPQTDFIIVLADGQITEMGHYSELLQHDGSF 843

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BLAST of abc c2 partial vs. SwissProt
Match: gi|75072999|sp|Q8HXQ5.1|MRP1_BOVIN (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter)

HSP 1 Score: 181.8 bits (460), Expect = 3.419e-53
Identity = 86/117 (73.50%), Postives = 102/117 (87.18%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L D L+H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF  CTVLTIAHRLNTIMDY R++VLDKG+I+E+ SP +LL+    LFY MAKD+ L
Sbjct: 1414 LPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEWGSPSDLLQQ-RGLFYSMAKDSGL 1529

HSP 2 Score: 50.0618 bits (118), Expect = 5.301e-7
Identity = 33/104 (31.73%), Postives = 53/104 (50.96%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTI---RKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLL 101
            L  G   ++ E G NLS GQ+Q + LARA+   + V +LD+  +AVD      I   +   +   +  T L + H ++ +   D I+V+  G+I E  S + LL
Sbjct:  753 LPSGDRTEIGEKGVNLSGGQKQRVSLARAVYCDSDVYLLDDPLSAVDAHVGKHIFENVIGPKGLLKNKTRLLVTHAISYLPQMDVIIVMSGGKISEMGSYQELL 856

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BLAST of abc c2 partial vs. SwissProt
Match: gi|218526606|sp|B2RX12.1|MRP3_MOUSE (RecName: Full=Canalicular multispecific organic anion transporter 2; AltName: Full=ATP-binding cassette sub-family C member 3; AltName: Full=Multidrug resistance-associated protein 3)

HSP 1 Score: 181.03 bits (458), Expect = 8.340e-53
Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = 0

Query:    4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118
            GL  + +EGGDNLSVGQRQL+CLARALLRK++VL+LDEATAA+DLETDDLIQ TIR QF+ CTVLTIAHRLNTIMDY+R++VLDKG + EFDSP NL+     +FYGMAKDA L 
Sbjct: 1410 GLDFQCAEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIA-AGGIFYGMAKDAGLA 1523

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BLAST of abc c2 partial vs. SwissProt
Match: gi|82231164|sp|Q5F364.1|MRP1_CHICK (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter)

HSP 1 Score: 180.644 bits (457), Expect = 1.063e-52
Identity = 84/118 (71.19%), Postives = 103/118 (87.29%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118
            L D L+H+ SEGG+NLSVGQRQL+CLARALLRK+K+L+LDEATAAVDLETD+LIQ+TI+ QF+ CTVLTIAHRLNTIMDY R++VLD+G++ E DSP+NLL+    LFY MAKD+ L 
Sbjct: 1409 LPDKLNHECSEGGENLSVGQRQLVCLARALLRKSKILVLDEATAAVDLETDNLIQSTIKSQFEECTVLTIAHRLNTIMDYTRVLVLDRGEVVECDSPDNLLQ-AKGLFYSMAKDSGLA 1525

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BLAST of abc c2 partial vs. SwissProt
Match: gi|52783101|sp|O35379.1|MRP1_MOUSE (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter)

HSP 1 Score: 179.104 bits (453), Expect = 2.999e-52
Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L D L+H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETD+LIQ+TIR QF+ CTVLTIAHRLNTIMDY R++VLDKG++RE  +P  LL+    +FY MAKDA L
Sbjct: 1412 LPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVRECGAPSELLQQ-RGIFYSMAKDAGL 1527

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BLAST of abc c2 partial vs. SwissProt
Match: gi|75071939|sp|Q6UR05.1|MRP1_CANFA (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter)

HSP 1 Score: 179.104 bits (453), Expect = 3.712e-52
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L D L+ + +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF  CTVLTIAHRLNTIMDY R++VLDKG+IRE   P +LL+    LFY MAKDA L
Sbjct: 1415 LPDKLNQECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIRECGQPSDLLQQ-RGLFYSMAKDAGL 1530

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BLAST of abc c2 partial vs. SwissProt
Match: gi|85701143|sp|Q8CG09.2|MRP1_RAT (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter)

HSP 1 Score: 177.563 bits (449), Expect = 1.247e-51
Identity = 85/117 (72.65%), Postives = 100/117 (85.47%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L D L+H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF+  TVLTIAHRLNTIMDY R++VLDKG+IRE  +P  LL+    +FY MAKDA L
Sbjct: 1416 LPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDSTVLTIAHRLNTIMDYTRVIVLDKGEIRECGAPSELLQQ-RGVFYSMAKDAGL 1531

[Close]

BLAST of abc c2 partial vs. SwissProt
Match: gi|6920069|sp|O15438.3|MRP3_HUMAN (RecName: Full=Canalicular multispecific organic anion transporter 2; AltName: Full=ATP-binding cassette sub-family C member 3; AltName: Full=Multi-specific organic anion transporter D; Short=MOAT-D; AltName: Full=Multidrug resistance-associated protein 3)

HSP 1 Score: 176.792 bits (447), Expect = 2.085e-51
Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 0

Query:    4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118
            GL  + SEGG+NLSVGQRQL+CLARALLRK+++L+LDEATAA+DLETD+LIQ TIR QF  CTVLTIAHRLNTIMDY R++VLDKG + EFDSP NL+     +FYGMA+DA L 
Sbjct: 1414 GLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLIQATIRTQFDTCTVLTIAHRLNTIMDYTRVLVLDKGVVAEFDSPANLIA-ARGIFYGMARDAGLA 1527

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|1316204576|ref|XP_023212655.1| (multidrug resistance-associated protein 1-like [Centruroides sculpturatus])

HSP 1 Score: 206.453 bits (524), Expect = 1.591e-64
Identity = 97/117 (82.91%), Postives = 107/117 (91.45%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            LE GL H +SEGG+NLSVGQRQL+CLARALLRKTKVLILDEATAA+DLETD LIQTTIR +F GCT+LTIAHRLNTIMDYDR++VLDKG I+EFDSPENLL+N  SLFYGMAKDA L
Sbjct:  166 LESGLEHMISEGGENLSVGQRQLVCLARALLRKTKVLILDEATAAIDLETDALIQTTIRTEFAGCTILTIAHRLNTIMDYDRVLVLDKGIIKEFDSPENLLQNKESLFYGMAKDARL 282

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|586962512|gb|AHK05644.1| (ATP-binding cassette transporter sub-family C member 1 isoform X5 [Tigriopus japonicus])

HSP 1 Score: 212.231 bits (539), Expect = 3.083e-61
Identity = 100/117 (85.47%), Postives = 110/117 (94.02%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            LEDGL H VSEGG+NLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQ+TIRK+F+GCTVLTIAHRLNTIMDYDRI+VLDKG+I EFDSP+ LL+N  S+FY MA+DANL
Sbjct: 1392 LEDGLEHPVSEGGENLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQSTIRKEFKGCTVLTIAHRLNTIMDYDRIIVLDKGRIEEFDSPQALLENPGSIFYSMARDANL 1508

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|1133448726|ref|XP_019851872.1| (PREDICTED: multidrug resistance-associated protein 1-like, partial [Amphimedon queenslandica])

HSP 1 Score: 186.037 bits (471), Expect = 1.759e-58
Identity = 92/118 (77.97%), Postives = 102/118 (86.44%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118
            L +GL + V+EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ TIRK+F GCTVLTIAHRLNTIMDYD+IMVLD G I EFDSP N+L     LFYGMAKDA L 
Sbjct:   29 LAEGLEYPVAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQKTIRKEFAGCTVLTIAHRLNTIMDYDKIMVLDAGCISEFDSP-NVLLERRGLFYGMAKDAGLA 145

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|338235270|gb|AEI91125.1| (ABC C2 transporter, partial [Rhipicephalus microplus])

HSP 1 Score: 186.808 bits (473), Expect = 1.796e-58
Identity = 85/117 (72.65%), Postives = 105/117 (89.74%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            LE GL H ++EGG+N+SVGQRQL+CLARALLRK+++LILDEATAAVD+ETDDLIQ TIR++F  CT++TIAHRLNT++DYDRIMVLD+GQI EFD+P +LLK   S+FY +AKDANL
Sbjct:   45 LEKGLEHIITEGGENISVGQRQLVCLARALLRKSRILILDEATAAVDMETDDLIQATIRREFADCTIITIAHRLNTVLDYDRIMVLDRGQIVEFDAPRDLLKQETSVFYQLAKDANL 161

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|908502109|ref|XP_013062667.1| (PREDICTED: canalicular multispecific organic anion transporter 2-like [Biomphalaria glabrata])

HSP 1 Score: 190.274 bits (482), Expect = 9.155e-58
Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 0

Query:    4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            GL     EGG NLSVGQRQL+CLAR+LLRKTK+L+LDEATAAVD+ETDDLIQ TIR +F+ CTVLTIAHRLNTIMDYDRIMVLD+G+I+EFD+P+ LLKN  S+FYGMAKDANL
Sbjct:  202 GLEFVCDEGGQNLSVGQRQLVCLARSLLRKTKILVLDEATAAVDMETDDLIQKTIRSEFKDCTVLTIAHRLNTIMDYDRIMVLDQGEIKEFDAPDILLKNKQSIFYGMAKDANL 315

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|1078810430|ref|XP_018496819.1| (PREDICTED: LOW QUALITY PROTEIN: multidrug resistance-associated protein 1-like [Galendromus occidentalis])

HSP 1 Score: 200.29 bits (508), Expect = 3.925e-57
Identity = 92/118 (77.97%), Postives = 106/118 (89.83%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118
            +E GL H+VSEGG+NLSVGQRQLICLAR+LLRKT+VL+LDEATAAVDLETD+LIQ TIR +F+ CT++TIAHRLNTIMDYDRIMVLD G I+EFDSP  LLKN +S+FY MAKDANL 
Sbjct: 1511 VEKGLDHEVSEGGENLSVGQRQLICLARSLLRKTRVLVLDEATAAVDLETDELIQKTIRTEFKDCTIMTIAHRLNTIMDYDRIMVLDNGYIKEFDSPSELLKNKNSIFYSMAKDANLA 1628

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|1321305418|ref|XP_023294651.1| (multidrug resistance-associated protein 1 isoform X14 [Lucilia cuprina])

HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L  GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL
Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|1321305412|ref|XP_023294648.1| (multidrug resistance-associated protein 1 isoform X11 [Lucilia cuprina])

HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L  GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL
Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|1321305406|ref|XP_023294645.1| (multidrug resistance-associated protein 1 isoform X8 [Lucilia cuprina])

HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L  GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL
Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549

[Close]

BLAST of abc c2 partial vs. nr
Match: gi|1321305410|ref|XP_023294647.1| (multidrug resistance-associated protein 1 isoform X10 [Lucilia cuprina])

HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117
            L  GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL
Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549

The following BLAST results are available for this feature:

BLAST of abc c2 partial vs. L. salmonis genes
BLAST of abc c2 partial vs. SwissProt
BLAST of abc c2 partial vs. nr

BLAST of abc c2 partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 13


Match Name	E-value	Identity	Description
EMLSAG00000008248	5.710e-52	70.69	supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1...	[more]
EMLSAG00000002221	2.916e-47	66.67	supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 ...	[more]
EMLSAG00000003611	2.162e-46	64.96	supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 ...	[more]
EMLSAG00000011700	4.154e-44	61.21	supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 ...	[more]
EMLSAG00000000752	7.319e-42	62.16	supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 g...	[more]
EMLSAG00000001655	1.666e-30	49.52	supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487...	[more]
EMLSAG00000000745	3.260e-26	47.66	supercontig:LSalAtl2s:LSalAtl2s111:261767:264074:1...	[more]
EMLSAG00000002016	2.039e-25	39.82	supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1...	[more]
EMLSAG00000007660	2.235e-20	48.35	supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 g...	[more]
EMLSAG00000010048	2.150e-18	39.00	supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1...	[more]

Pages

BLAST of abc c2 partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|296439301\|sp\|P33527.3\|MRP1_HUMAN	1.089e-53	73.50	RecName: Full=Multidrug resistance-associated prot...	[more]
gi\|75072869\|sp\|Q864R9.1\|MRP1_MACFA	2.556e-53	72.65	RecName: Full=Multidrug resistance-associated prot...	[more]
gi\|6016599\|sp\|O88563.1\|MRP3_RAT	3.257e-53	74.78	RecName: Full=Canalicular multispecific organic an...	[more]
gi\|75072999\|sp\|Q8HXQ5.1\|MRP1_BOVIN	3.419e-53	73.50	RecName: Full=Multidrug resistance-associated prot...	[more]
gi\|218526606\|sp\|B2RX12.1\|MRP3_MOUSE	8.340e-53	73.91	RecName: Full=Canalicular multispecific organic an...	[more]
gi\|82231164\|sp\|Q5F364.1\|MRP1_CHICK	1.063e-52	71.19	RecName: Full=Multidrug resistance-associated prot...	[more]
gi\|52783101\|sp\|O35379.1\|MRP1_MOUSE	2.999e-52	71.79	RecName: Full=Multidrug resistance-associated prot...	[more]
gi\|75071939\|sp\|Q6UR05.1\|MRP1_CANFA	3.712e-52	73.50	RecName: Full=Multidrug resistance-associated prot...	[more]
gi\|85701143\|sp\|Q8CG09.2\|MRP1_RAT	1.247e-51	72.65	RecName: Full=Multidrug resistance-associated prot...	[more]
gi\|6920069\|sp\|O15438.3\|MRP3_HUMAN	2.085e-51	71.30	RecName: Full=Canalicular multispecific organic an...	[more]

Pages

BLAST of abc c2 partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1316204576\|ref\|XP_023212655.1\|	1.591e-64	82.91	multidrug resistance-associated protein 1-like [Ce...	[more]
gi\|586962512\|gb\|AHK05644.1\|	3.083e-61	85.47	ATP-binding cassette transporter sub-family C memb...	[more]
gi\|1133448726\|ref\|XP_019851872.1\|	1.759e-58	77.97	PREDICTED: multidrug resistance-associated protein...	[more]
gi\|338235270\|gb\|AEI91125.1\|	1.796e-58	72.65	ABC C2 transporter, partial [Rhipicephalus micropl...	[more]
gi\|908502109\|ref\|XP_013062667.1\|	9.155e-58	78.07	PREDICTED: canalicular multispecific organic anion...	[more]
gi\|1078810430\|ref\|XP_018496819.1\|	3.925e-57	77.97	PREDICTED: LOW QUALITY PROTEIN: multidrug resistan...	[more]
gi\|1321305418\|ref\|XP_023294651.1\|	3.957e-57	79.49	multidrug resistance-associated protein 1 isoform ...	[more]
gi\|1321305412\|ref\|XP_023294648.1\|	3.957e-57	79.49	multidrug resistance-associated protein 1 isoform ...	[more]
gi\|1321305406\|ref\|XP_023294645.1\|	3.957e-57	79.49	multidrug resistance-associated protein 1 isoform ...	[more]
gi\|1321305410\|ref\|XP_023294647.1\|	3.957e-57	79.49	multidrug resistance-associated protein 1 isoform ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold2698_size13172	supercontig	scaffold2698_size13172:6356..13157 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:ATP catabolic process

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold2698_size13172-snap-gene-0.4-mRNA-1	maker-scaffold2698_size13172-snap-gene-0.4-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold2698_size13172:6356..13157-

gene from alignment at scaffold2698_size13172:6356..13157-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold2698_size13172-snap-gene-0.4 ID=maker-scaffold2698_size13172-snap-gene-0.4|Name=abc c2 partial|organism=Tigriopus kingsejongensis|type=gene|length=6802bp|location=Sequence derived from alignment at scaffold2698_size13172:6356..13157- (Tigriopus kingsejongensis)
ACCTTTGTGGCCTCCTTGGAGGACGGACTCAGCCATAAAGTCAGTGAGGG
TGGGGACAACTTGAGTGTGGGTCAAAGACAACTCATCTGTCTAGCCCGAG
CTCTCTTGCGGAAGACCAAGGTCCTAATCCTCGACGAGGCCACAGCTGCT
GTCGACCTCGAGACCGACGATCTCATTCAGACGACAATTCGCAAGCAGTT
TCAAGGATGCACCGTCCTCACCATTGCCCATCGTCTCAATACCATCATGG
ACTACGACAGGATCATGGTCTTGGACAAGGGACAGATCAGAGAGTTTGAT
TCTCCGGAGAATCTTCTCAAAAATACCCATTCGCTCTTCTATGGTATGGC
CAAGGATGCCAATTTGGTATAAAACGCATTTGTACAATATAGGAAACATA
AGCCAGATTTTGGTATATACTTTTTGGCCAGCTCACAAGAGGTTGGATGG
CGATCGCATCTTGACAACTCAAACCGAACCAATTGCGCCGCACCTCCTTT
GAATGGAGAATGGAGAGCGTGTGACATCCTCGAGGATGCTAGAGCTTTGA
AGTTTAGTGAGGTTAATAAGGGACTGTTTAAGTGAGTTTAGGAAGGGACT
CTTTAAGTGAGTTTGGGGAAGGGACTCTTTTATTGAGTTTATGAAGGGAC
TCTTTTTGTGATTTCAGGAAGTGACTCTTTTAGTGAGTTTAGGAAGGGAC
TCTTTAAGTGAGTTTAGGAACGGACTCTTTTATTGAGTTTATGAAGGGAC
TAGCAGCAAATTAAGCTTAAAAGAGCATACCTGGCGGTTAATTGGTCTAT
CTACTGTAAGTGCTATATGTATACCGGCGAATCTTGGATGTACTTTGGGG
TGACCCGTGGTCGTTGTGGCCAGCTTTTTTTGATGGCTAGGCCATATTAA
GTCTCCCGGCTAGACAGACATCCTTGTAAGGAACTCCCAAATGTGACAGT
GTTGAAATAATTTGTCTAAGCCAGGGCATGGATTTCATAACATCAGGATG
AATCCCTTAATACGAGGTCACCTGAATGTTCCTCCATTGGCAGGCACTCA
AACCAACGATACTAAAAGTCAATTTACATACAATACTAACAAGAGAAGCC
CACTTCTAGTGTGTAATCGGATTATATTTGACGAAAAATACCGCCAGCAT
AAAAGACTCTTATTACATTGTTTTAGTCATGCTTAGTCATGCGTGGCAGG
AAAATGTATATATATAAAAAAAATTACTAGATGGCAGCATCCTTGCTCAC
TTTTTTTTACCGGACGGTTGAGACATTTCTCCCAGTTTTGTAGGGTTTAA
GAGTGACCAGTTGATGGAATCTGAAAAACAGAGGATGCTCTGAAGCCCTA
CGGAACAGGAGAATGTCTCAAGCAACTCCGATCCGTCAATCGATGACATG
AACGACTTTCTGCTCCCTCTAAAAAGTGAACACATTCTAGAAATGATGAC
AATAACTTTATTCTTATGTCTTCCAAGCAATTAAAGCTTCTACAAATCAA
TACCTTCTAAAAAAATAACTTCTGAAAAGTATCAACCTTCAAAGAGCTAA
TACCTTGTAAAAAGTAACAAACTATGAATAAGTTAACTCATTCAAAAAAG
TGAATAATTGTAACAAGGTACCTCATTCTAATAATTATTTTCTAACCTTC
AAAAAAGTGAAAAGCTTTTAAAAATGCATTACCTTTGGAAAAGGTAAAAG
CTTTTAAAAAGCAAAGAACTTCTAAATAAAAGGCATAAGTTAAAAAAAAT
CATTCTACAAAGTCAACTCATTCTAAAAATATCAACTCATTCTTCAAAGT
CAACTCATTCTAAAAATATCAGCTCATTCTTCAAAGTCAACTCATTATAA
AAAGTAATTTACTTTTAAGAAGCATGGTCATTCGTAAAAGTAAATATCTT
CCAAAAGTGAACTCATTCTTAGTAGTAAATAAGTTCTAAAAGTTCACTAA
TTCTGAAAGGACCAGATCACCAATTCTAAAAAGTCAATAACTTTTGATTA
ATTAACTGGCTCTAAAAGGTTAGTGATTCCTGCAGATCCCTAAAAGTTAA
TATATAAAAGGACTACATTTAAAACTAGGGCTTGACCTTTCAATAAGTTT
AAAATTGAAAAAGACTCCACTTCAACCATTGCCGTAAGTGCCGCGTGCGG
GAGACATTTTCTTTCTGAACGACATTCAGCTGATTTTATGACTGAATAAT
TTCCGAAAAAGGTTCCTTGACACTCCAGGAACAATGTGTCCCAAGCGCAC
GACAGTATCAATCAGGAATGGTCATGTTTTCAAAAAATCAAACCGAAGGA
AAAATGGAATTGAACCTCATACGTCGAGTCTCATTTATTAGTAACTACAG
TAGATTCAATGTAGTTTCAAACCGCCCAACTTAGATCTTCGGAATTAGCA
TGATACTTTCATGATTGGCGGATTACATGTACCATACGTATGAATAGGTC
ACGTTCACAAACTTAATTACAACTTCGGCAGGGACATAGCAATTCACAAA
TAAGTTCAGCCTTATCTTCATCAGAGGGGCACACATTGAGATCACATAAT
GAACATGCATACTATACATACGCGAGCATTACTCATGGAAATTTATTTCC
CTTCATAATGTCGCTTGGAAAGCCAATGCAATCGGAGAAGGTTGGTTAAC
GGATGTAATCAGTCCGTGAATTGGGGGAGATGCCAACAAAGCATCTATTG
TAAAAACATGTTTGTATAGGTAAGCATAGCTCTAGTCGTGGGTATATCCC
GAAATAAACATACGTATACACAATACCACAACATACATACACTTTAAGGC
TGTGCGATATTCTCGAATTTGAATATCAATAAATCATCTGCGATATCTCA
TTTGAGGTCGATAATTGGTATAGATTATCGTTACTTTTTCACTTCACATT
GATTATCGATATTTTACTTCACATTGATTATCAATGTTCACATCGATTAT
CAATATTTCACTTCACATCGATTATCGATATTGCACTTCACATTGATTAT
CAATGTTCACACCGATTATCAATATTTCGCTTAACATCGAGTGTGTGTAA
TCGTTTATTCCTACACATTAAAATAGGTTTATACCCGGGAGTCAACACTT
AGCAAACGAATGCTAGTCAATAGTGGGTGTGTGTGTTATCGAACCTTCCG
GTGGTTTCGTGTTCGCACCATGTGAATTATCGTGATTACCCTGCCACTCG
CCTCCAAACCTCGACTCATGATCTGACCTTCGCCACCCTACTTAAAGGCT
CGGCGAAGACTATTGGAGATCACTCGCTGCACCCAAGCGAACCCCGCGCC
TGACCCCCGGCTCCACATCGTCCCGCAGGGTGCGCTTTACGCTTATTTTT
ATATCAAACATATCCCTTATGTTATATTGTAAATACACAGGCTTGTCCCA
CTGAGACTAAGAGACGGGTTATTATTTCACCATGGAGCATCGGGATGGAG
CTCGTAGGGCTGGGAACTTGTTCCACATGGCGATTCCGTTGTCTACCAGG
GTGTTGGCTGCGTAGGGAAGATGCGGTGAGACAACTCCGACCTGGTCGAC
CTCGTAGCGACGTTGGAGGGGAAGAGAACCTGGCCAAGGGCGTTCCTCGA
GCCATCCGGCCCATCTTGACTGTGGAAGGCTCGCCACGTCTCCATGGCCA
CTGCATGCACAGTGAGCTCATTGAGGCTGGACAAACCTGCCCGCTGCAAT
AGAGAAGATACGTTAATATGGTCCGTCCTCTTTTTGCCCAAAATGGATGT
GGCCACATCATTAATGGCAATTTGGCCAGCCCTGTAGCTGGCTACAGGCG
GGGATGTGTCTTCCTCCAATCTGGGGGCTGCTACCGCCCCGATGGCATAG
CTAACCTTGCCCAGAACCAATCCCCTCGCCAGCTGCTGCAGGTAGGCTCC
CCTGGGCAAGTGGCGTGACAACCTAGCGATCATGGCAGCCACCGAGGCCC
CATGGGGGAAAATACTGAAGCTTGAGTCGGATGGTGAAGAGTCCCGCTTC
TAGATGTTCGGGAACCCTAGACTCTTAAGTCGTAAAAAATCGATTCTTTG
GTTCGACTCACTTTTCAATACCAAAAATGATATTATCTTCCTTGATAAAG
TCCTGAGTTATGCACGGCAGCTAGGGCGAATTTAGAATCGGCATTATTAT
TGTCATCGATTTGCCATATGGAGGGTGTTTTAACGTGTTGTATGAGCGAG
CAATTGGATCTGCAATTTGGCAACATCACATATTTTGTCGGCAAGGCTTT
CNTCCATGCTTTGCTTAAGGGCTTAAGCTGAAGGCTATGCATGTTGTTGG
GAGGGAGGAGGAGGAGGTGGACGGGGCCGGGATTCGGCGGCGAGGCAGCT
GAGCACCGGGGAGGATGGGGGGTACTGAAGCTTGAGTCGGATGGTGAAGA
GTCCCGCTTCTAGATGTTCGGGAACCCTAGACTCTTAAGTCGTAAAAAAT
CGATTCTTTGGTTCGACTCACTTTTCAATACCAAAAATGATATTATCTTC
CTTGATAAAGTCCTGAGTTATGCACGGCAGCTAGGGCGAATTTAGAATCG
GCATTATTATTGTCATCGATTTGCCATATGGAGGGTGTTTTAACGTGTTG
TATGAGCGAGCAATTGGATCTGCAATTTGGCAACATCACATATTTTGTCG
GCAAGGCTTTCAAATACCGTCAAAAAACCGAAGGTCATGTAGAACCCCCA
AATGTTTCAGATTGGGCAAGCTTTAATTGCCACTTTCGAAATTTCTGTAA
TACTTTTTAATCTCAAGTCTAGTCAAACAATTATTATACGTATACATTTT
ATCTGACACGCATGACTACAACAATACACTGAGTTAATTTTTTTGAAGAC
GGAATTTTTCGTTTAATACAATCTGATTACACACCCACTCTTCAGAAAAC
AGGGTTGACTCTTTGGAAAATGCCGAAATTACCTATGAAGTCGTCGACTC
TTTTTCAGCTCTCGACTTAACCTCAACCCTAACTTAAATTAAAAAAAGAC
GAACTGCTAAGTAGATATTTAGGCTCTGGAGCGGTGACAGTTGGCAATCC
GTAGCAAATCTGAAGATTTTTGATTATTTTCTGGAAAATATCCCAAAGGT
TCATTGGTTGTTCAGCTGACTAACACGTGGTGACAAATTGGAAACAAAAA
TGGGACAGAATGCAACTTTTAACAATTCATTTTTTTATTCAAATTGTCTA
GGATTTTAAAATCTTTTCAATTTATGTAGAACCATTTGTAAAGGCCGAAT
TGCCCCAATAAGACCGCCTTGAAACCTGACCCTTATACTAAGTGTCACTC
ATTATACAGTGTGTTCTTGTTGCGAGTCGTGATCTCAAATCACGTATACA
TTCACCTATATACGTACACAAATAGCTCATTGGAAACTTACACGTTTGAC
TTAGAGACGTTTCTCGAAGTACGAGGATTTGTTAGTGCGTTAGACAATTA
CACAGGGCTTGAATTTGATCGTGTTATGAAATGTGTTGCCATATGTGAAT
ATGTGATATAATTGATTCAAATTTTATCTAAACAATTATGAGAATTCGTC
CTTTAATAGAGAAAAGACCTACCGTCCTTGTAACTACAGCGTCAAGTCGA
GGTACAATTGACTCAAGCCAGAGTGTAGGGGGGGGAGGGGGGATTATGCC
AGAGCCTCGATGGGAATGACCTTCAAGAGGTCATATTTTGCATTCGCAAG
GACTGAACGAAAACATTCAGAGCAAATATTGCAGTCAAGTTATTGAGGTC
TAGCGAGGATGGGGCGACAGATACCCTTGCACCATAAACTATGTAACACA
TACACCCGATTGAAAACAGACAGTTTTGACAGATCCACGGAGGTTATTAT
ACCAAATAATGCCATCATATAGGTACATTACACCAAATTATACCATTTCC
AGAAAGGCCGTATTTTGTGCATTACAACACACTCCGAGGCTTTCCTCAGT
TTGAGTCCAAACCTTTTTTTCACATTTCGAGCCAAAAAAACACAAAGAAC
AAATTTTGTTCCTATTGTTAAAAAAATCACAGAAGTGCAAAAAATATAAT
GTGTTTTGGATTTTGGTTTTTTGTTTTATTATTTTGCTTGGCTTTTTGTC
CAAGTGAACAGTTAAACCAAAATTATGCCAAAGTCAGCTGTTGTTGTTGT
TGTTGTGAAAGAGAGGGGGACGGGACAGATACAAGATCTGTACCGCCCCC
ACGGCCGGTCCGTTTCCGGACCATTATGCCTTCTCCCGGACTCTCCACCT
TAATCTCCCCTCTGGTCGAACAGATGTTCAATATGTGCTTCCCGAAGGAA
GCTGAACACCTGTGGGACCGACCATACGAGGGGTAAAAGTCAGCTGTTAT
ACCAAATTAAATTTGGTAATACTCTTAGCCTTCTTAATTATACCATTTTG
CTAAAAAATAATCCAGATTATACCAATCTGTCCACGCTAAAGACAGCCTC
AAAAATGCGGTGAAAGCGTGGACGCCATCTTCCATGCACCCAAACGGGAT
ATCTCTGGTTCGAGTGCACTTCCCAGCTCATTGCATTATTTCATTCTGTA
GAAACTCACTCTCTGCAAGAAAATATTCGATTGAATTTTTACCTCAAATT
TAGATAGCACCTTCAGTATTGCTACGTTGACAAAGATATCCAACTTCTGC
TAATGTTCATAAGTTCATTGAAGGATGATTCGTGCCTTCACTATAAAAAG
TGTTACTATCGGGTGACCATTGAGTAGCATAATAGAGATTGTTGGACTGA
CAAAATATTATTTTCAATCCATTCAATTTTCGTCCAATTTCAGGGGTGCT
AG

Synonyms

The feature 'abc c2 partial' has the following synonyms


Synonym
Tk03832

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