abc c2 partial, maker-scaffold2698_size13172-snap-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 174.096 bits (440), Expect = 5.710e-52 Identity = 82/116 (70.69%), Postives = 97/116 (83.62%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDAN 116 L DGL+ V EGG NLSVGQRQLICLARA+LRKT++L+LDEATAA+DLETDDLIQ+TIR +F+ TVLTIAHR+NTIMD +RIMVLD G I EFD P+NLL N S+FY + D+N Sbjct: 1402 LGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLANPDSMFYSLVNDSN 1517
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 160.614 bits (405), Expect = 2.916e-47 Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+DGL + VSEGG+NLS+GQRQLICLARALLR+T+VLILDEATAAVDLETD+LIQ TIR +F+ TV+TIAHRLNTIMDY +I+VL G+ E+ + LL + S FY M DA L Sbjct: 1442 LKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADKKSQFYSMCSDAGL 1558 HSP 2 Score: 47.3654 bits (111), Expect = 1.408e-7 Identity = 30/106 (28.30%), Postives = 53/106 (50.00%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGC----TVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLK 102 L G ++ E G NLS GQ+Q + LARA+ + + +LD+ +AVD I + G T + + H + + D+I+V+ G++ E + + LL+ Sbjct: 746 LPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLR 851
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 158.303 bits (399), Expect = 2.162e-46 Identity = 76/117 (64.96%), Postives = 91/117 (77.78%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+DGL+H +SEGG NLS GQRQL+CLARALLR K+LILDEATAAVD ETD+ IQ TIR F CT+LTIAHRL TI+DYD+I+VLDKG + EF SP L N+ S+F+ M A + Sbjct: 1281 LKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHSMINAAGI 1397
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 151.754 bits (382), Expect = 4.154e-44 Identity = 71/116 (61.21%), Postives = 91/116 (78.45%), Query Frame = 0 Query: 2 EDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 EDGL ++E G+N+S+GQRQLICLARALLRK KVLI+DEATAAVD ETD LIQ I+ F+ TVLTIAHRL T++DY +I+V+D G I E+DSP+NLL ++ S FY M ++ + Sbjct: 1872 EDGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLSDSSSTFYKMCLNSGI 1987 HSP 2 Score: 47.7506 bits (112), Expect = 1.217e-7 Identity = 33/102 (32.35%), Postives = 52/102 (50.98%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLE-TDDLIQTTIRKQ--FQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLK 102 G S ++ E G NLS GQ+Q I LARA+ ++ + LD+ A VD L + I +G T + + H L+ + D I L G+I E + + L++ Sbjct: 1262 GDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELME 1363
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000000752 (supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 gene:EMLSAG00000000752 transcript:EMLSAT00000000752 description:"maker-LSalAtl2s111-augustus-gene-1.10") HSP 1 Score: 145.206 bits (365), Expect = 7.319e-42 Identity = 69/111 (62.16%), Postives = 85/111 (76.58%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGM 111 LE GL +VSEGG+N SVGQRQL CLARA+LRK KVLI+DEATA VD TD LIQ IR +F+ CTV TIAHRL T+MD DRI+V+ G+I+E +P +LL + ++FY M Sbjct: 1465 LEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELGAPLDLLSDPSNIFYQM 1575 HSP 2 Score: 84.7297 bits (208), Expect = 1.099e-20 Identity = 50/111 (45.05%), Postives = 61/111 (54.95%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGM 111 L GL V E G N SVGQRQL CLA A+LR+ KVLI+DEATA VD TD LIQ IRK+F+ CT EF +P++LLK+ ++L M Sbjct: 171 LGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLIQEAIRKEFKDCT--------------------------EFGTPKDLLKDPNNLLSRM 255 HSP 3 Score: 46.9802 bits (110), Expect = 2.097e-7 Identity = 34/109 (31.19%), Postives = 55/109 (50.46%), Query Frame = 0 Query: 3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLET-DDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDK-GQIREFDSPENLLKNTHSLFY 109 DG V E G +LS GQ+ I LAR + + ILD+ +AVD L T I+K TV+ + H+L + + + I++L+ G+I + E L+ + + Y Sbjct: 828 DGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVDPHVGQQLFDTCIQKFLSDKTVILVTHQLQFLKNANNIILLNSDGEIEASGTYEKLMSQSGFVTY 936
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4") HSP 1 Score: 112.849 bits (281), Expect = 1.666e-30 Identity = 52/105 (49.52%), Postives = 76/105 (72.38%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLF 108 GL + +GG +LS+GQ+QL+CLARA++ KV+ +DEATA+VD ETD LI+ ++ F TV+TIAHR+ T+++ DRI V+ GQI E PE+L+K+ +S F Sbjct: 1344 GLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKSPNSEF 1448
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000000745 (supercontig:LSalAtl2s:LSalAtl2s111:261767:264074:1 gene:EMLSAG00000000745 transcript:EMLSAT00000000745 description:"maker-LSalAtl2s111-snap-gene-2.13") HSP 1 Score: 94.3597 bits (233), Expect = 3.260e-26 Identity = 51/107 (47.66%), Postives = 62/107 (57.94%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSL 107 L GL +V++GG N S+GQRQLI TD LIQ IR +F CTVLTIAHRLNT+MD DR++VL G+I EFD P LL+N H+L Sbjct: 24 LNGGLDAQVTDGGSNFSIGQRQLI-------------------------TDSLIQEAIRIKFSKCTVLTIAHRLNTVMDSDRMLVLSDGRIEEFDEPHTLLQNDHNL 105
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 98.2117 bits (243), Expect = 2.039e-25 Identity = 45/113 (39.82%), Postives = 78/113 (69.03%), Query Frame = 0 Query: 3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDA 115 DGL V+E GDN S+GQRQ + + +ALLR+ +V+ILDE+T+A+D + + T+ + F+ T++++AHRL+ I++Y+R++V+ +G+I E +P+ LLK F + + A Sbjct: 1774 DGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGFFSALWRAA 1886
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 83.9593 bits (206), Expect = 2.235e-20 Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 0 Query: 3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIRE 93 DG S + E G +S GQ+Q I +ARALL+ +LILDEAT+A+D E++ ++Q + K +G T L IAHRL+TI + D I V+DKG + E Sbjct: 561 DGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAE 651
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 78.1814 bits (191), Expect = 2.150e-18 Identity = 39/100 (39.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 9 VSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLF 108 V E G LS GQ+Q I +ARAL+R +L+LDEA++A+D +++ ++Q+ + K +G T + +AHRL+TI D I+V+ G ++ + E+L N L+ Sbjct: 378 VGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLY 477
BLAST of abc c2 partial vs. SwissProt
Match: gi|338817955|sp|Q8VI47.2|MRP2_MOUSE (RecName: Full=Canalicular multispecific organic anion transporter 1; AltName: Full=ATP-binding cassette sub-family C member 2) HSP 1 Score: 167.548 bits (423), Expect = 3.273e-48 Identity = 81/117 (69.23%), Postives = 98/117 (83.76%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+ GL H+V+EGGDNLS+GQRQL+CL RA+LRK+K+L+LDEATAAVDLETD LIQTTIR +F CTV+TIAHRL+TIMD D+IMVLD G+I E+ SPE LL N FY MAK+A + Sbjct: 1420 LQLGLLHEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRNEFSQCTVITIAHRLHTIMDSDKIMVLDSGKIVEYGSPEELLSNMGP-FYLMAKEAGI 1535
BLAST of abc c2 partial vs. SwissProt
Match: gi|3219824|sp|Q63120.1|MRP2_RAT (RecName: Full=Canalicular multispecific organic anion transporter 1; AltName: Full=ATP-binding cassette sub-family C member 2; AltName: Full=Canalicular multidrug resistance protein; AltName: Full=Multidrug resistance-associated protein 2) HSP 1 Score: 167.548 bits (423), Expect = 4.336e-48 Identity = 82/117 (70.09%), Postives = 99/117 (84.62%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+ GL +V+EGGDNLS+GQRQL+CL RA+LRK+K+L+LDEATAAVDLETD LIQTTIRK+F CTV+TIAHRL+TIMD D+IMVLD G+I E+ SPE LL N S FY MAK+A + Sbjct: 1418 LQLGLLSEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRKEFSQCTVITIAHRLHTIMDSDKIMVLDNGKIVEYGSPEELLSNRGS-FYLMAKEAGI 1533
BLAST of abc c2 partial vs. SwissProt
Match: gi|308153583|sp|Q92887.3|MRP2_HUMAN (RecName: Full=Canalicular multispecific organic anion transporter 1; AltName: Full=ATP-binding cassette sub-family C member 2; AltName: Full=Canalicular multidrug resistance protein; AltName: Full=Multidrug resistance-associated protein 2) HSP 1 Score: 159.073 bits (401), Expect = 3.136e-45 Identity = 78/117 (66.67%), Postives = 97/117 (82.91%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+ GLSH+V+E G NLS+GQRQL+CL RALLRK+K+L+LDEATAAVDLETD+LIQTTI+ +F CTV+TIAHRL+TIMD D++MVLD G+I E SPE LL+ FY MAK+A + Sbjct: 1422 LQLGLSHEVTEAGGNLSIGQRQLLCLGRALLRKSKILVLDEATAAVDLETDNLIQTTIQNEFAHCTVITIAHRLHTIMDSDKVMVLDNGKIIECGSPEELLQ-IPGPFYFMAKEAGI 1537
BLAST of abc c2 partial vs. SwissProt
Match: gi|8134577|sp|Q28689.1|MRP2_RABIT (RecName: Full=Canalicular multispecific organic anion transporter 1; AltName: Full=ATP-binding cassette sub-family C member 2; AltName: Full=Canalicular multidrug resistance protein; AltName: Full=Epithelial basolateral chloride conductance regulator; AltName: Full=Multidrug resistance-associated protein 2) HSP 1 Score: 158.303 bits (399), Expect = 7.225e-45 Identity = 78/117 (66.67%), Postives = 95/117 (81.20%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+ GLS +VSE DNLS+GQRQL+CL RALLRK+K+L+LDEATAAVDLETD LIQTTIR +F CTV+TIAHRL+TIMD D+IMVLD G I E+ SPE LL++ F MAK++ + Sbjct: 1420 LQHGLSREVSEAEDNLSIGQRQLLCLGRALLRKSKILVLDEATAAVDLETDHLIQTTIRNEFSHCTVITIAHRLHTIMDSDKIMVLDNGNIVEYGSPEELLESAGP-FSLMAKESGI 1535 HSP 2 Score: 51.2174 bits (121), Expect = 2.262e-7 Identity = 34/97 (35.05%), Postives = 50/97 (51.55%), Query Frame = 0 Query: 8 KVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTI---RKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLL 101 ++ E G NLS GQ+Q I LARA + + + ILD+ +AVD I + G T L + H L+ + D I+V++ G I E S +LL Sbjct: 751 EIGEKGINLSGGQKQRISLARASYQNSDIYILDDPLSAVDAHVGKHIFNKVLGPNGLLNGKTRLLVTHSLHFLPQVDEIVVVENGTILEKGSYSSLL 847
BLAST of abc c2 partial vs. SwissProt
Match: gi|74680022|sp|Q5A762.1|MLT1_CANAL (RecName: Full=Multiple drug resistance-associated protein-like transporter 1; Short=MRP-like transporter 1; AltName: Full=Vacuolar multi-drug resistance ABC transporter MTL1) HSP 1 Score: 154.836 bits (390), Expect = 1.125e-43 Identity = 71/113 (62.83%), Postives = 93/113 (82.30%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKT-KVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDA 115 GL ++ EGG NLS GQ+QL+CLARALL +T K+L+LDEATAAVD +TD +IQ TIR +F+ T+LTIAHR++TIMD D+I+VLD G++ EFDSP+NLLKN S+FY +AK+ Sbjct: 1490 GLDAQIEEGGSNLSSGQKQLLCLARALLNETSKILVLDEATAAVDFQTDKIIQETIRTEFKDKTILTIAHRIDTIMDSDKILVLDSGKVAEFDSPQNLLKNKDSIFYSLAKEG 1602
BLAST of abc c2 partial vs. SwissProt
Match: gi|31340495|sp|Q9P5N0.1|ABC3_SCHPO (RecName: Full=ATP-binding cassette transporter abc3) HSP 1 Score: 154.451 bits (389), Expect = 1.485e-43 Identity = 70/117 (59.83%), Postives = 94/117 (80.34%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 LEDGL +V+EGG N S GQRQLICLAR LL T++L+LDEATA+V ETD ++Q TIRK+F+ T+LT+AHR+NT+MD DRI+VLD G++ EFD+ + LL+N S+FY +AK++ L Sbjct: 1348 LEDGLYSRVAEGGANFSSGQRQLICLARVLLTSTRILLLDEATASVHAETDAIVQQTIRKRFKDRTILTVAHRINTVMDSDRILVLDHGKVVEFDATKKLLENKDSMFYSLAKESGL 1464 HSP 2 Score: 49.6766 bits (117), Expect = 6.118e-7 Identity = 35/108 (32.41%), Postives = 59/108 (54.63%), Query Frame = 0 Query: 3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLE-TDDLIQTTIRKQ---FQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHS 106 +G +V + G +LS GQ+ I LARA+ + + +LD+ ++VD + DLI+ + C VLT + LN + + D I +L G+I E + E+L +T+S Sbjct: 691 EGDQTEVGQKGASLSGGQKSRISLARAIYSQADIYLLDDVLSSVDQHVSRDLIKNLFGPEGFLRTHCVVLT-TNSLNVLKEADSIYILSNGKIVEKGNYEHLFVSTNS 797
BLAST of abc c2 partial vs. SwissProt
Match: gi|75017603|sp|Q8ST87.1|ABCCA_DICDI (RecName: Full=ABC transporter C family member 10; AltName: Full=ABC transporter ABCC.10) HSP 1 Score: 153.68 bits (387), Expect = 2.379e-43 Identity = 74/108 (68.52%), Postives = 86/108 (79.63%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLF 108 LE GL KV+E G+N SVGQRQLI LARALLRK K+L+LDEATA+VD ++D LIQ TIR +F CT+LTIAHRLNTIMD DRIMVLD G+I EFD P LL+N + L Sbjct: 1175 LEGGLDSKVTENGENFSVGQRQLIVLARALLRKPKILVLDEATASVDGQSDSLIQATIRNKFSNCTILTIAHRLNTIMDSDRIMVLDAGKISEFDEPWTLLQNQNGLL 1282 HSP 2 Score: 49.2914 bits (116), Expect = 8.975e-7 Identity = 32/91 (35.16%), Postives = 48/91 (52.75%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLET-DDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIRE 93 G S ++ E G NLS GQ+Q + +ARA+ V ILD+ +AVD L + TV+ +A++LN + D +VL G+I E Sbjct: 537 GDSVEIGERGINLSGGQKQRVSIARAVYSDADVYILDDPLSAVDSHVGKHLFHKCFKGILSSKTVILVANQLNYLPFADNTVVLKSGEIVE 627
BLAST of abc c2 partial vs. SwissProt
Match: gi|1723255|sp|Q10185.1|ABC2_SCHPO (RecName: Full=ATP-binding cassette transporter abc2; Short=ABC transporter abc2; AltName: Full=ATP-energized glutathione S-conjugate pump abc2; AltName: Full=Glutathione S-conjugate-transporting ATPase abc2) HSP 1 Score: 153.68 bits (387), Expect = 2.484e-43 Identity = 72/117 (61.54%), Postives = 95/117 (81.20%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+ GL +V+EGG NLS GQRQL+CL RALL T+VL+LDEATAAVD+ETD ++Q TIR++F T+LTIAHR+NT+MD +RI+VLD G++ EFDS + LL+N SLFY +AK++ L Sbjct: 1361 LDGGLYSRVTEGGANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIRERFNDRTILTIAHRINTVMDSNRILVLDHGKVVEFDSTKKLLENKASLFYSLAKESGL 1477
BLAST of abc c2 partial vs. SwissProt
Match: gi|6920083|sp|P39109.2|YCFI_YEAST (RecName: Full=Metal resistance protein YCF1; AltName: Full=Yeast cadmium factor 1) HSP 1 Score: 153.295 bits (386), Expect = 3.168e-43 Identity = 73/115 (63.48%), Postives = 92/115 (80.00%), Query Frame = 0 Query: 3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 DGL +++EGG NLSVGQRQL+CLARA+L +K+L+LDEATAAVD+ETD ++Q TIR F+ T+LTIAHRLNTIMD DRI+VLD G++ EFDSP LL + SLFY + +A L Sbjct: 1397 DGLDAQLTEGGGNLSVGQRQLLCLARAMLVPSKILVLDEATAAVDVETDKVVQETIRTAFKDRTILTIAHRLNTIMDSDRIIVLDNGKVAEFDSPGQLLSDNKSLFYSLCMEAGL 1511
BLAST of abc c2 partial vs. SwissProt
Match: gi|74997050|sp|Q54U44.1|ABCCC_DICDI (RecName: Full=ABC transporter C family member 12; AltName: Full=ABC transporter ABCC.12) HSP 1 Score: 152.91 bits (385), Expect = 5.692e-43 Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = 0 Query: 2 EDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKD 114 E+GL+ KV+E G+N SVGQRQLI LARALLRK K+L+LDEATA+VD ++D LIQ TIR +F CT+LTIAHRLNTIMD D+IMVLD G+I EFD P LL+N + L + + Sbjct: 1170 EEGLNSKVTENGENFSVGQRQLIVLARALLRKPKILVLDEATASVDGQSDSLIQATIRNKFSNCTILTIAHRLNTIMDSDKIMVLDAGKISEFDEPWTLLQNQNGLLTWLVNE 1282
BLAST of abc c2 partial vs. nr
Match: gi|1321305420|ref|XP_023294652.1| (multidrug resistance-associated protein 1 isoform X15 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305408|ref|XP_023294646.1| (multidrug resistance-associated protein 1 isoform X9 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305402|ref|XP_023294643.1| (multidrug resistance-associated protein 1 isoform X6 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1434 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1550
BLAST of abc c2 partial vs. nr
Match: gi|1321305404|ref|XP_023294644.1| (multidrug resistance-associated protein 1 isoform X7 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1434 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1550
BLAST of abc c2 partial vs. nr
Match: gi|1321305396|ref|XP_023294639.1| (multidrug resistance-associated protein 1 isoform X3 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.958e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305398|ref|XP_023294640.1| (multidrug resistance-associated protein 1 isoform X4 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.958e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305400|ref|XP_023294641.1| (multidrug resistance-associated protein 1 isoform X5 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.958e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305392|ref|XP_023294637.1| (multidrug resistance-associated protein 1 isoform X1 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.958e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1434 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1550
BLAST of abc c2 partial vs. nr
Match: gi|1321305394|ref|XP_023294638.1| (multidrug resistance-associated protein 1 isoform X2 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.958e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1434 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1550
BLAST of abc c2 partial vs. nr
Match: gi|906466397|gb|KNC27832.1| (hypothetical protein FF38_12503 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.994e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 2023 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 2139 The following BLAST results are available for this feature:
BLAST of abc c2 partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of abc c2 partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc c2 partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2698_size13172:6356..13157- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold2698_size13172-snap-gene-0.4 ID=maker-scaffold2698_size13172-snap-gene-0.4|Name=abc c2 partial|organism=Tigriopus kingsejongensis|type=gene|length=6802bp|location=Sequence derived from alignment at scaffold2698_size13172:6356..13157- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc c2 partial' has the following synonyms
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