abc c2 partial, maker-scaffold2698_size13172-snap-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 174.096 bits (440), Expect = 5.710e-52 Identity = 82/116 (70.69%), Postives = 97/116 (83.62%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDAN 116 L DGL+ V EGG NLSVGQRQLICLARA+LRKT++L+LDEATAA+DLETDDLIQ+TIR +F+ TVLTIAHR+NTIMD +RIMVLD G I EFD P+NLL N S+FY + D+N Sbjct: 1402 LGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLANPDSMFYSLVNDSN 1517
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 160.614 bits (405), Expect = 2.916e-47 Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+DGL + VSEGG+NLS+GQRQLICLARALLR+T+VLILDEATAAVDLETD+LIQ TIR +F+ TV+TIAHRLNTIMDY +I+VL G+ E+ + LL + S FY M DA L Sbjct: 1442 LKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLADKKSQFYSMCSDAGL 1558 HSP 2 Score: 47.3654 bits (111), Expect = 1.408e-7 Identity = 30/106 (28.30%), Postives = 53/106 (50.00%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGC----TVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLK 102 L G ++ E G NLS GQ+Q + LARA+ + + +LD+ +AVD I + G T + + H + + D+I+V+ G++ E + + LL+ Sbjct: 746 LPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLR 851
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 158.303 bits (399), Expect = 2.162e-46 Identity = 76/117 (64.96%), Postives = 91/117 (77.78%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+DGL+H +SEGG NLS GQRQL+CLARALLR K+LILDEATAAVD ETD+ IQ TIR F CT+LTIAHRL TI+DYD+I+VLDKG + EF SP L N+ S+F+ M A + Sbjct: 1281 LKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHSMINAAGI 1397
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 151.754 bits (382), Expect = 4.154e-44 Identity = 71/116 (61.21%), Postives = 91/116 (78.45%), Query Frame = 0 Query: 2 EDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 EDGL ++E G+N+S+GQRQLICLARALLRK KVLI+DEATAAVD ETD LIQ I+ F+ TVLTIAHRL T++DY +I+V+D G I E+DSP+NLL ++ S FY M ++ + Sbjct: 1872 EDGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLSDSSSTFYKMCLNSGI 1987 HSP 2 Score: 47.7506 bits (112), Expect = 1.217e-7 Identity = 33/102 (32.35%), Postives = 52/102 (50.98%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLE-TDDLIQTTIRKQ--FQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLK 102 G S ++ E G NLS GQ+Q I LARA+ ++ + LD+ A VD L + I +G T + + H L+ + D I L G+I E + + L++ Sbjct: 1262 GDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGLLRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELME 1363
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000000752 (supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 gene:EMLSAG00000000752 transcript:EMLSAT00000000752 description:"maker-LSalAtl2s111-augustus-gene-1.10") HSP 1 Score: 145.206 bits (365), Expect = 7.319e-42 Identity = 69/111 (62.16%), Postives = 85/111 (76.58%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGM 111 LE GL +VSEGG+N SVGQRQL CLARA+LRK KVLI+DEATA VD TD LIQ IR +F+ CTV TIAHRL T+MD DRI+V+ G+I+E +P +LL + ++FY M Sbjct: 1465 LEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELGAPLDLLSDPSNIFYQM 1575 HSP 2 Score: 84.7297 bits (208), Expect = 1.099e-20 Identity = 50/111 (45.05%), Postives = 61/111 (54.95%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGM 111 L GL V E G N SVGQRQL CLA A+LR+ KVLI+DEATA VD TD LIQ IRK+F+ CT EF +P++LLK+ ++L M Sbjct: 171 LGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLIQEAIRKEFKDCT--------------------------EFGTPKDLLKDPNNLLSRM 255 HSP 3 Score: 46.9802 bits (110), Expect = 2.097e-7 Identity = 34/109 (31.19%), Postives = 55/109 (50.46%), Query Frame = 0 Query: 3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLET-DDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDK-GQIREFDSPENLLKNTHSLFY 109 DG V E G +LS GQ+ I LAR + + ILD+ +AVD L T I+K TV+ + H+L + + + I++L+ G+I + E L+ + + Y Sbjct: 828 DGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVDPHVGQQLFDTCIQKFLSDKTVILVTHQLQFLKNANNIILLNSDGEIEASGTYEKLMSQSGFVTY 936
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4") HSP 1 Score: 112.849 bits (281), Expect = 1.666e-30 Identity = 52/105 (49.52%), Postives = 76/105 (72.38%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLF 108 GL + +GG +LS+GQ+QL+CLARA++ KV+ +DEATA+VD ETD LI+ ++ F TV+TIAHR+ T+++ DRI V+ GQI E PE+L+K+ +S F Sbjct: 1344 GLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKSPNSEF 1448
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000000745 (supercontig:LSalAtl2s:LSalAtl2s111:261767:264074:1 gene:EMLSAG00000000745 transcript:EMLSAT00000000745 description:"maker-LSalAtl2s111-snap-gene-2.13") HSP 1 Score: 94.3597 bits (233), Expect = 3.260e-26 Identity = 51/107 (47.66%), Postives = 62/107 (57.94%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSL 107 L GL +V++GG N S+GQRQLI TD LIQ IR +F CTVLTIAHRLNT+MD DR++VL G+I EFD P LL+N H+L Sbjct: 24 LNGGLDAQVTDGGSNFSIGQRQLI-------------------------TDSLIQEAIRIKFSKCTVLTIAHRLNTVMDSDRMLVLSDGRIEEFDEPHTLLQNDHNL 105
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 98.2117 bits (243), Expect = 2.039e-25 Identity = 45/113 (39.82%), Postives = 78/113 (69.03%), Query Frame = 0 Query: 3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDA 115 DGL V+E GDN S+GQRQ + + +ALLR+ +V+ILDE+T+A+D + + T+ + F+ T++++AHRL+ I++Y+R++V+ +G+I E +P+ LLK F + + A Sbjct: 1774 DGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGNPKELLKKPMGFFSALWRAA 1886
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 83.9593 bits (206), Expect = 2.235e-20 Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 0 Query: 3 DGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIRE 93 DG S + E G +S GQ+Q I +ARALL+ +LILDEAT+A+D E++ ++Q + K +G T L IAHRL+TI + D I V+DKG + E Sbjct: 561 DGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAE 651
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 78.1814 bits (191), Expect = 2.150e-18 Identity = 39/100 (39.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 9 VSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLF 108 V E G LS GQ+Q I +ARAL+R +L+LDEA++A+D +++ ++Q+ + K +G T + +AHRL+TI D I+V+ G ++ + E+L N L+ Sbjct: 378 VGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLY 477
BLAST of abc c2 partial vs. SwissProt
Match: gi|2506123|sp|P14772.2|BPT1_YEAST (RecName: Full=Bile pigment transporter 1) HSP 1 Score: 149.828 bits (377), Expect = 5.332e-42 Identity = 66/113 (58.41%), Postives = 93/113 (82.30%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAK 113 + D L K++E G NLSVGQRQL+CLARALL ++K+L+LDEATA+VD+ETD +IQ TIR++F+ T+LTIAHR++T++D D+I+VLD+G +REFDSP LL + S+FY + + Sbjct: 1441 VNDILDVKINENGSNLSVGQRQLLCLARALLNRSKILVLDEATASVDMETDKIIQDTIRREFKDRTILTIAHRIDTVLDSDKIIVLDQGSVREFDSPSKLLSDKTSIFYSLCE 1553
BLAST of abc c2 partial vs. SwissProt
Match: gi|3915963|sp|P32386.2|YBT1_YEAST (RecName: Full=ATP-dependent bile acid permease) HSP 1 Score: 147.132 bits (370), Expect = 4.692e-41 Identity = 64/109 (58.72%), Postives = 88/109 (80.73%), Query Frame = 0 Query: 5 LSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAK 113 LS ++SEGG NLS GQRQL+CLAR+LLR K+++LDEATA++D +D IQ TIRK+FQG T+LTIAHRL +++DYD+I+V+D G+++E+D P +LL N S FY M + Sbjct: 1528 LSSEISEGGSNLSQGQRQLMCLARSLLRSPKIILLDEATASIDYSSDAKIQETIRKEFQGSTILTIAHRLRSVIDYDKILVMDAGEVKEYDHPYSLLLNKQSAFYSMCE 1636
BLAST of abc c2 partial vs. SwissProt
Match: gi|206729914|sp|O15439.3|MRP4_HUMAN (RecName: Full=Multidrug resistance-associated protein 4; AltName: Full=ATP-binding cassette sub-family C member 4; AltName: Full=MRP/cMOAT-related ABC transporter; AltName: Full=Multi-specific organic anion transporter B; Short=MOAT-B) HSP 1 Score: 145.976 bits (367), Expect = 1.275e-40 Identity = 67/106 (63.21%), Postives = 86/106 (81.13%), Query Frame = 0 Query: 8 KVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAK 113 +++E G N SVGQRQL+CLARA+LRK ++LI+DEATA VD TD+LIQ IR++F CTVLTIAHRLNTI+D D+IMVLD G+++E+D P LL+N SLFY M + Sbjct: 1169 ELAESGSNFSVGQRQLVCLARAILRKNQILIIDEATANVDPRTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNKESLFYKMVQ 1274
BLAST of abc c2 partial vs. SwissProt
Match: gi|74996860|sp|Q54P13.1|ABCC8_DICDI (RecName: Full=ABC transporter C family member 8; AltName: Full=ABC transporter ABCC.8) HSP 1 Score: 144.436 bits (363), Expect = 3.919e-40 Identity = 65/113 (57.52%), Postives = 87/113 (76.99%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAK 113 L+ GL V +GGDN SVGQRQL+ + RALL+K +++LDEA++++D+ +D LIQ TIR +F CTVLTIAHRL TI D D+IMVLDKG++ E+DSP LLKN S++Y + K Sbjct: 1466 LDGGLDAMVQDGGDNFSVGQRQLLVIGRALLKKANIIVLDEASSSIDIASDALIQETIRTKFADCTVLTIAHRLGTIADSDKIMVLDKGELIEYDSPSELLKNQDSIYYSLVK 1578
BLAST of abc c2 partial vs. SwissProt
Match: gi|1018447391|sp|P91660.4|L259_DROME (RecName: Full=Probable multidrug resistance-associated protein lethal(2)03659; AltName: Full=Wunen region A protein) HSP 1 Score: 144.05 bits (362), Expect = 5.417e-40 Identity = 65/106 (61.32%), Postives = 86/106 (81.13%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHS 106 L DGL+ K+SEGG N SVGQRQL+CLARA+LR+ ++L++DEATA VD +TD LIQ TIR +F+ CTVLTIAHRL+TI+D D++MV+D G++ EF SP L+ + S Sbjct: 1240 LPDGLASKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFGSPYELMTKSDS 1345 HSP 2 Score: 59.3066 bits (142), Expect = 3.080e-10 Identity = 34/95 (35.79%), Postives = 52/95 (54.74%), Query Frame = 0 Query: 9 VSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETD-DLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLK 102 V E G LS GQ+ I LAR++ RK + +LD+ +AVD L +R +G TV+ + H+ + D+I++L GQI+ E+LLK Sbjct: 617 VGERGATLSGGQKARISLARSVYRKASIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQIKALGDYESLLK 711
BLAST of abc c2 partial vs. nr
Match: gi|1321305416|ref|XP_023294650.1| (multidrug resistance-associated protein 1 isoform X13 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 4.153e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305414|ref|XP_023294649.1| (multidrug resistance-associated protein 1 isoform X12 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 4.620e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|154551047|gb|ABS83557.1| (ABCC/MRP-like protein [Mytilus californianus]) HSP 1 Score: 199.904 bits (507), Expect = 4.844e-57 Identity = 96/117 (82.05%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+DGL H+ SEGGDNLSVGQRQLICLARALLRKT++L+LDEATAAVDLETDDLIQTTIR +F CT+LTIAHRLNTIMDY RIMVLD GQIREFDSP NLL + +S+FYGMAKDA L Sbjct: 1380 LKDGLDHQCSEGGDNLSVGQRQLICLARALLRKTRILVLDEATAAVDLETDDLIQTTIRTEFADCTILTIAHRLNTIMDYTRIMVLDCGQIREFDSPTNLLLDKNSIFYGMAKDAGL 1496
BLAST of abc c2 partial vs. nr
Match: gi|675389739|gb|KFM82636.1| (Multidrug resistance-associated protein 1, partial [Stegodyphus mimosarum]) HSP 1 Score: 199.519 bits (506), Expect = 8.185e-57 Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L+DGL H++ EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDL+TDDLIQTTIRK+F +VLTIAHRLNT+MDYDRIMVLDKG++ EFDSP LLKN S+FYGMAKDA L Sbjct: 1431 LDDGLDHEIIEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLQTDDLIQTTIRKEFADASVLTIAHRLNTVMDYDRIMVLDKGKVAEFDSPSVLLKNKKSIFYGMAKDARL 1547
BLAST of abc c2 partial vs. nr
Match: gi|118151643|gb|ABK63642.1| (multidrug resistance-associated protein, partial [Mytilus galloprovincialis]) HSP 1 Score: 181.415 bits (459), Expect = 1.151e-56 Identity = 90/108 (83.33%), Postives = 96/108 (88.89%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLF 108 L+DGL H SEGGDNLSVGQRQLICLARALLRKTK+L+LDEATAAVDLETDDLIQTTIR +F CTVLTIAHRLNTIMDY RIMVLD GQIREFDSP NLL + S+F Sbjct: 31 LKDGLDHHCSEGGDNLSVGQRQLICLARALLRKTKILVLDEATAAVDLETDDLIQTTIRTEFADCTVLTIAHRLNTIMDYTRIMVLDCGQIREFDSPPNLLLDKKSIF 138 The following BLAST results are available for this feature:
BLAST of abc c2 partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of abc c2 partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc c2 partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2698_size13172:6356..13157- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold2698_size13172-snap-gene-0.4 ID=maker-scaffold2698_size13172-snap-gene-0.4|Name=abc c2 partial|organism=Tigriopus kingsejongensis|type=gene|length=6802bp|location=Sequence derived from alignment at scaffold2698_size13172:6356..13157- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc c2 partial' has the following synonyms
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