abc c2 partial, maker-scaffold2698_size13172-snap-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000000090 (supercontig:LSalAtl2s:LSalAtl2s1014:9799:23913:-1 gene:EMLSAG00000000090 transcript:EMLSAT00000000090 description:"maker-LSalAtl2s1014-snap-gene-0.6") HSP 1 Score: 74.3294 bits (181), Expect = 4.446e-17 Identity = 40/116 (34.48%), Postives = 63/116 (54.31%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDAN 116 L GL + E G N+S+ LI I+DEA +A+ LE+++ I T +F T+ IAHR+ ++ D+I+VL+ G I EF +PE+L+K+ S+F M + N Sbjct: 777 LPGGLDFSLKENGSNISLAGSNLI-------------IMDEAXSAMTLESEERILNTYFSRFSSSTIFVIAHRIQPLLACDKILVLENGTIAEFGNPESLIKSQKSIFKSMLRRTN 879 HSP 2 Score: 46.595 bits (109), Expect = 2.560e-7 Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = 0 Query: 9 VSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVD--LETDDLIQTTIRKQF-QGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENL 100 ++ G LS GQRQ I ARA+ + +V ++D+ +A D L+ T K F Q T L I ++ + I DRI+V+ G + E DS E + Sbjct: 170 LASNGSTLSGGQRQRIGFARAIYQNAQVYLMDDPLSACDSNLKAQIFHNTIGPKGFLQKKTRLLITNQSSLIPLMDRIIVIQNGTVEEKDSAEEV 264
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 72.4034 bits (176), Expect = 2.550e-16 Identity = 41/110 (37.27%), Postives = 68/110 (61.82%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAK 113 G +V E G LS G++Q + +ARA L+ + ++I DEAT+++D T+ +I +++ G T + IAHRL+T++ D I VL G++ E + E LL NT +L G ++ Sbjct: 489 GYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL-NTLTLPNGRSR 597
BLAST of abc c2 partial vs. L. salmonis genes
Match: EMLSAG00000004492 (supercontig:LSalAtl2s:LSalAtl2s2344:67375:70448:-1 gene:EMLSAG00000004492 transcript:EMLSAT00000004492 description:"snap-LSalAtl2s2344-processed-gene-0.9") HSP 1 Score: 45.0542 bits (105), Expect = 8.715e-8 Identity = 21/57 (36.84%), Postives = 34/57 (59.65%), Query Frame = 0 Query: 63 QGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLGC 119 +G TV+TIAHRL+TI + DRI V+ +G++ E S L+ ++ F + + C Sbjct: 2 KGRTVVTIAHRLSTIQNADRIAVVHEGKVMEIGSYSELMNISNGYFKNLVQKQTFSC 58
BLAST of abc c2 partial vs. SwissProt
Match: gi|296439301|sp|P33527.3|MRP1_HUMAN (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter) HSP 1 Score: 183.341 bits (464), Expect = 1.089e-53 Identity = 86/117 (73.50%), Postives = 102/117 (87.18%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L D L H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF+ CTVLTIAHRLNTIMDY R++VLDKG+I+E+ +P +LL+ LFY MAKDA L Sbjct: 1415 LPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEYGAPSDLLQQ-RGLFYSMAKDAGL 1530
BLAST of abc c2 partial vs. SwissProt
Match: gi|75072869|sp|Q864R9.1|MRP1_MACFA (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter) HSP 1 Score: 182.185 bits (461), Expect = 2.556e-53 Identity = 85/117 (72.65%), Postives = 102/117 (87.18%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L D L H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF+ CTVLTIAHRLNTIMDY R++VLDKG+I+E+ +P +LL+ LFY MA+DA L Sbjct: 1415 LPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEYGAPSDLLQQ-RGLFYNMARDAGL 1530
BLAST of abc c2 partial vs. SwissProt
Match: gi|6016599|sp|O88563.1|MRP3_RAT (RecName: Full=Canalicular multispecific organic anion transporter 2; AltName: Full=ATP-binding cassette sub-family C member 3; AltName: Full=MRP-like protein 2; Short=MLP-2; AltName: Full=Multidrug resistance-associated protein 3) HSP 1 Score: 182.185 bits (461), Expect = 3.257e-53 Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118 GL + SEGGDNLSVGQRQL+CLARALLRK++VL+LDEATAA+DLETDDLIQ TIR QF+ CTVLTIAHRLNTIMDY+R++VLDKG + EFDSP NL+ +FYGMAKDA L Sbjct: 1409 GLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIA-AGGIFYGMAKDAGLA 1522 HSP 2 Score: 50.0618 bits (118), Expect = 5.148e-7 Identity = 35/110 (31.82%), Postives = 52/110 (47.27%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTI---RKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSL 107 L G ++ E G NLS GQRQ + LARA+ + +LD+ +AVD I + G T + + H ++ + D I+VL GQI E LL++ S Sbjct: 734 LPGGDQTEIGEKGINLSGGQRQRVSLARAVYSDANIFLLDDPLSAVDSHVAKHIFDQVIGPEGVLAGKTRVLVTHGISFLPQTDFIIVLADGQITEMGHYSELLQHDGSF 843
BLAST of abc c2 partial vs. SwissProt
Match: gi|75072999|sp|Q8HXQ5.1|MRP1_BOVIN (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter) HSP 1 Score: 181.8 bits (460), Expect = 3.419e-53 Identity = 86/117 (73.50%), Postives = 102/117 (87.18%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L D L+H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF CTVLTIAHRLNTIMDY R++VLDKG+I+E+ SP +LL+ LFY MAKD+ L Sbjct: 1414 LPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEWGSPSDLLQQ-RGLFYSMAKDSGL 1529 HSP 2 Score: 50.0618 bits (118), Expect = 5.301e-7 Identity = 33/104 (31.73%), Postives = 53/104 (50.96%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTI---RKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLL 101 L G ++ E G NLS GQ+Q + LARA+ + V +LD+ +AVD I + + + T L + H ++ + D I+V+ G+I E S + LL Sbjct: 753 LPSGDRTEIGEKGVNLSGGQKQRVSLARAVYCDSDVYLLDDPLSAVDAHVGKHIFENVIGPKGLLKNKTRLLVTHAISYLPQMDVIIVMSGGKISEMGSYQELL 856
BLAST of abc c2 partial vs. SwissProt
Match: gi|218526606|sp|B2RX12.1|MRP3_MOUSE (RecName: Full=Canalicular multispecific organic anion transporter 2; AltName: Full=ATP-binding cassette sub-family C member 3; AltName: Full=Multidrug resistance-associated protein 3) HSP 1 Score: 181.03 bits (458), Expect = 8.340e-53 Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118 GL + +EGGDNLSVGQRQL+CLARALLRK++VL+LDEATAA+DLETDDLIQ TIR QF+ CTVLTIAHRLNTIMDY+R++VLDKG + EFDSP NL+ +FYGMAKDA L Sbjct: 1410 GLDFQCAEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIA-AGGIFYGMAKDAGLA 1523
BLAST of abc c2 partial vs. SwissProt
Match: gi|82231164|sp|Q5F364.1|MRP1_CHICK (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter) HSP 1 Score: 180.644 bits (457), Expect = 1.063e-52 Identity = 84/118 (71.19%), Postives = 103/118 (87.29%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118 L D L+H+ SEGG+NLSVGQRQL+CLARALLRK+K+L+LDEATAAVDLETD+LIQ+TI+ QF+ CTVLTIAHRLNTIMDY R++VLD+G++ E DSP+NLL+ LFY MAKD+ L Sbjct: 1409 LPDKLNHECSEGGENLSVGQRQLVCLARALLRKSKILVLDEATAAVDLETDNLIQSTIKSQFEECTVLTIAHRLNTIMDYTRVLVLDRGEVVECDSPDNLLQ-AKGLFYSMAKDSGLA 1525
BLAST of abc c2 partial vs. SwissProt
Match: gi|52783101|sp|O35379.1|MRP1_MOUSE (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter) HSP 1 Score: 179.104 bits (453), Expect = 2.999e-52 Identity = 84/117 (71.79%), Postives = 101/117 (86.32%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L D L+H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETD+LIQ+TIR QF+ CTVLTIAHRLNTIMDY R++VLDKG++RE +P LL+ +FY MAKDA L Sbjct: 1412 LPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVRECGAPSELLQQ-RGIFYSMAKDAGL 1527
BLAST of abc c2 partial vs. SwissProt
Match: gi|75071939|sp|Q6UR05.1|MRP1_CANFA (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter) HSP 1 Score: 179.104 bits (453), Expect = 3.712e-52 Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L D L+ + +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF CTVLTIAHRLNTIMDY R++VLDKG+IRE P +LL+ LFY MAKDA L Sbjct: 1415 LPDKLNQECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIRECGQPSDLLQQ-RGLFYSMAKDAGL 1530
BLAST of abc c2 partial vs. SwissProt
Match: gi|85701143|sp|Q8CG09.2|MRP1_RAT (RecName: Full=Multidrug resistance-associated protein 1; AltName: Full=ATP-binding cassette sub-family C member 1; AltName: Full=Leukotriene C(4) transporter; Short=LTC4 transporter) HSP 1 Score: 177.563 bits (449), Expect = 1.247e-51 Identity = 85/117 (72.65%), Postives = 100/117 (85.47%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L D L+H+ +EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ+TIR QF+ TVLTIAHRLNTIMDY R++VLDKG+IRE +P LL+ +FY MAKDA L Sbjct: 1416 LPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDSTVLTIAHRLNTIMDYTRVIVLDKGEIRECGAPSELLQQ-RGVFYSMAKDAGL 1531
BLAST of abc c2 partial vs. SwissProt
Match: gi|6920069|sp|O15438.3|MRP3_HUMAN (RecName: Full=Canalicular multispecific organic anion transporter 2; AltName: Full=ATP-binding cassette sub-family C member 3; AltName: Full=Multi-specific organic anion transporter D; Short=MOAT-D; AltName: Full=Multidrug resistance-associated protein 3) HSP 1 Score: 176.792 bits (447), Expect = 2.085e-51 Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118 GL + SEGG+NLSVGQRQL+CLARALLRK+++L+LDEATAA+DLETD+LIQ TIR QF CTVLTIAHRLNTIMDY R++VLDKG + EFDSP NL+ +FYGMA+DA L Sbjct: 1414 GLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLIQATIRTQFDTCTVLTIAHRLNTIMDYTRVLVLDKGVVAEFDSPANLIA-ARGIFYGMARDAGLA 1527
BLAST of abc c2 partial vs. nr
Match: gi|1316204576|ref|XP_023212655.1| (multidrug resistance-associated protein 1-like [Centruroides sculpturatus]) HSP 1 Score: 206.453 bits (524), Expect = 1.591e-64 Identity = 97/117 (82.91%), Postives = 107/117 (91.45%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 LE GL H +SEGG+NLSVGQRQL+CLARALLRKTKVLILDEATAA+DLETD LIQTTIR +F GCT+LTIAHRLNTIMDYDR++VLDKG I+EFDSPENLL+N SLFYGMAKDA L Sbjct: 166 LESGLEHMISEGGENLSVGQRQLVCLARALLRKTKVLILDEATAAIDLETDALIQTTIRTEFAGCTILTIAHRLNTIMDYDRVLVLDKGIIKEFDSPENLLQNKESLFYGMAKDARL 282
BLAST of abc c2 partial vs. nr
Match: gi|586962512|gb|AHK05644.1| (ATP-binding cassette transporter sub-family C member 1 isoform X5 [Tigriopus japonicus]) HSP 1 Score: 212.231 bits (539), Expect = 3.083e-61 Identity = 100/117 (85.47%), Postives = 110/117 (94.02%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 LEDGL H VSEGG+NLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQ+TIRK+F+GCTVLTIAHRLNTIMDYDRI+VLDKG+I EFDSP+ LL+N S+FY MA+DANL Sbjct: 1392 LEDGLEHPVSEGGENLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQSTIRKEFKGCTVLTIAHRLNTIMDYDRIIVLDKGRIEEFDSPQALLENPGSIFYSMARDANL 1508
BLAST of abc c2 partial vs. nr
Match: gi|1133448726|ref|XP_019851872.1| (PREDICTED: multidrug resistance-associated protein 1-like, partial [Amphimedon queenslandica]) HSP 1 Score: 186.037 bits (471), Expect = 1.759e-58 Identity = 92/118 (77.97%), Postives = 102/118 (86.44%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118 L +GL + V+EGG+NLSVGQRQL+CLARALLRKTK+L+LDEATAAVDLETDDLIQ TIRK+F GCTVLTIAHRLNTIMDYD+IMVLD G I EFDSP N+L LFYGMAKDA L Sbjct: 29 LAEGLEYPVAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQKTIRKEFAGCTVLTIAHRLNTIMDYDKIMVLDAGCISEFDSP-NVLLERRGLFYGMAKDAGLA 145
BLAST of abc c2 partial vs. nr
Match: gi|338235270|gb|AEI91125.1| (ABC C2 transporter, partial [Rhipicephalus microplus]) HSP 1 Score: 186.808 bits (473), Expect = 1.796e-58 Identity = 85/117 (72.65%), Postives = 105/117 (89.74%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 LE GL H ++EGG+N+SVGQRQL+CLARALLRK+++LILDEATAAVD+ETDDLIQ TIR++F CT++TIAHRLNT++DYDRIMVLD+GQI EFD+P +LLK S+FY +AKDANL Sbjct: 45 LEKGLEHIITEGGENISVGQRQLVCLARALLRKSRILILDEATAAVDMETDDLIQATIRREFADCTIITIAHRLNTVLDYDRIMVLDRGQIVEFDAPRDLLKQETSVFYQLAKDANL 161
BLAST of abc c2 partial vs. nr
Match: gi|908502109|ref|XP_013062667.1| (PREDICTED: canalicular multispecific organic anion transporter 2-like [Biomphalaria glabrata]) HSP 1 Score: 190.274 bits (482), Expect = 9.155e-58 Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 0 Query: 4 GLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 GL EGG NLSVGQRQL+CLAR+LLRKTK+L+LDEATAAVD+ETDDLIQ TIR +F+ CTVLTIAHRLNTIMDYDRIMVLD+G+I+EFD+P+ LLKN S+FYGMAKDANL Sbjct: 202 GLEFVCDEGGQNLSVGQRQLVCLARSLLRKTKILVLDEATAAVDMETDDLIQKTIRSEFKDCTVLTIAHRLNTIMDYDRIMVLDQGEIKEFDAPDILLKNKQSIFYGMAKDANL 315
BLAST of abc c2 partial vs. nr
Match: gi|1078810430|ref|XP_018496819.1| (PREDICTED: LOW QUALITY PROTEIN: multidrug resistance-associated protein 1-like [Galendromus occidentalis]) HSP 1 Score: 200.29 bits (508), Expect = 3.925e-57 Identity = 92/118 (77.97%), Postives = 106/118 (89.83%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANLG 118 +E GL H+VSEGG+NLSVGQRQLICLAR+LLRKT+VL+LDEATAAVDLETD+LIQ TIR +F+ CT++TIAHRLNTIMDYDRIMVLD G I+EFDSP LLKN +S+FY MAKDANL Sbjct: 1511 VEKGLDHEVSEGGENLSVGQRQLICLARSLLRKTRVLVLDEATAAVDLETDELIQKTIRTEFKDCTIMTIAHRLNTIMDYDRIMVLDNGYIKEFDSPSELLKNKNSIFYSMAKDANLA 1628
BLAST of abc c2 partial vs. nr
Match: gi|1321305418|ref|XP_023294651.1| (multidrug resistance-associated protein 1 isoform X14 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305412|ref|XP_023294648.1| (multidrug resistance-associated protein 1 isoform X11 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305406|ref|XP_023294645.1| (multidrug resistance-associated protein 1 isoform X8 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549
BLAST of abc c2 partial vs. nr
Match: gi|1321305410|ref|XP_023294647.1| (multidrug resistance-associated protein 1 isoform X10 [Lucilia cuprina]) HSP 1 Score: 200.29 bits (508), Expect = 3.957e-57 Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0 Query: 1 LEDGLSHKVSEGGDNLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQTTIRKQFQGCTVLTIAHRLNTIMDYDRIMVLDKGQIREFDSPENLLKNTHSLFYGMAKDANL 117 L GL+H++SEGGDNLSVGQRQL+CLARALLRKTKVL+LDEATAAVDLETDDLIQ TIR +F+ CTVLTIAHRLNTI+D D+++VLDKG+I EFDSPENLL N+ S FY MAKDANL Sbjct: 1433 LPAGLNHEISEGGDNLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRSEFKECTVLTIAHRLNTILDSDKVIVLDKGEISEFDSPENLLNNSQSAFYSMAKDANL 1549 The following BLAST results are available for this feature:
BLAST of abc c2 partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 13
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BLAST of abc c2 partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc c2 partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2698_size13172:6356..13157- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold2698_size13172-snap-gene-0.4 ID=maker-scaffold2698_size13172-snap-gene-0.4|Name=abc c2 partial|organism=Tigriopus kingsejongensis|type=gene|length=6802bp|location=Sequence derived from alignment at scaffold2698_size13172:6356..13157- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc c2 partial' has the following synonyms
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