AGAP010608-PA, maker-scaffold269_size230758-snap-gene-1.33 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|25089873|sp|Q9VWA1.1|CLC_DROME (RecName: Full=Clathrin light chain; AltName: Full=dClc) HSP 1 Score: 110.923 bits (276), Expect = 4.219e-29 Identity = 79/219 (36.07%), Postives = 108/219 (49.32%), Query Frame = 0
Query: 14 DAFGTDELVDPEVDF----------------DAAASPPPDMSDD-----VTSAFEADAVLLEQPGDENASDTLADEPWANQVNGADEELPPARHSPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNRSSEKNFVA-EMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNPREI 210
D F E VDP +F +AS PP S D + ++ LL G + L + +V G + P P P E E I+ WRE+QKQRL +KD E E+L+ Q+K EL+DW ++ + + +T+ +R++EK E I PGTEWERI KLCDFN K N+ KD SR+RSI L LKQNP ++
Sbjct: 5 DDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAASTDEGLGELLGGTASEGDLLSAGG----TGGLESSTGSFEVIGGESNEPVGISGP----PPSREEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESISKTKLASRNAEKQAATLENGTIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQNPIQV 215
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|62510439|sp|Q6IRU5.1|CLCB_MOUSE (RecName: Full=Clathrin light chain B; Short=Lcb) HSP 1 Score: 97.0561 bits (240), Expect = 1.131e-23 Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 0
Query: 98 EHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNR------------------SSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
E E+I+ WRE+QK+RL + D A ++ + +AK +LE+W ++ ++ + + + +NR +SE+ FV E + TPGTEWE++ +LCDFN K+++ KD SRLRS+L+ LKQ P
Sbjct: 99 EPESIRKWREEQKKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADTIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTP 226
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|408360022|sp|O08585.2|CLCA_MOUSE (RecName: Full=Clathrin light chain A; Short=Lca) HSP 1 Score: 97.0561 bits (240), Expect = 1.502e-23 Identity = 55/169 (32.54%), Postives = 92/169 (54.44%), Query Frame = 0
Query: 57 GDENASDTLADEPWANQVNGADEELPPARHSPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNR------------------SSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
G +A D + + + + NG P ++ R + E E+I+ WRE+Q +RL D + K +A ELE+WY + + L +T+++NR ++E+ FV ++++ +PGTEWER+ +LCDFN K+++ KD SR+RS+L+ LKQ P
Sbjct: 69 GGPDAVDGVMNGEYYQESNG-----PTDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRVADEAFYKQPFADLIGYVAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAP 232
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|116507|sp|P08082.1|CLCB_RAT (RecName: Full=Clathrin light chain B; Short=Lcb) HSP 1 Score: 96.6709 bits (239), Expect = 1.585e-23 Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 0
Query: 98 EHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNR------------------SSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
E E+I+ WRE+QK+RL + D A ++ + +AK +LE+W ++ ++ + + + +NR +SE+ FV E + TPGTEWE++ +LCDFN K+++ KD SRLRS+L+ LKQ P
Sbjct: 99 EPESIRKWREEQKKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADTIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTP 226
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|116504|sp|P04975.1|CLCB_BOVIN (RecName: Full=Clathrin light chain B; Short=Lcb) HSP 1 Score: 96.2857 bits (238), Expect = 2.546e-23 Identity = 62/176 (35.23%), Postives = 95/176 (53.98%), Query Frame = 0
Query: 53 LEQPGDENASDTLADEPWANQVNG--ADEELPPARHSPTLATP-RPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNR------------------SSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
L QPG + A E VNG E PA +A R E E+I+ WRE+Q++RL + D A ++ + +AK +LE+W ++ ++ + + + +NR +SE+ FV E + TPGTEWE++ +LCDFN K+++ KD SRLRS+L+ LKQ P
Sbjct: 54 LAQPGPASG----ASEDMGATVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTP 225
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|116505|sp|P09497.1|CLCB_HUMAN (RecName: Full=Clathrin light chain B; Short=Lcb) HSP 1 Score: 95.9005 bits (237), Expect = 3.493e-23 Identity = 48/128 (37.50%), Postives = 79/128 (61.72%), Query Frame = 0
Query: 98 EHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNR------------------SSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
E E+I+ WRE+Q++RL + D A ++ + +AK +LE+W ++ ++ + + + +NR +SE+ FV E + TPGTEWE++ +LCDFN K+++ KD SRLRS+L+ LKQ P
Sbjct: 99 EPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTP 226
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|116501|sp|P09496.1|CLCA_HUMAN (RecName: Full=Clathrin light chain A; Short=Lca) HSP 1 Score: 95.1301 bits (235), Expect = 9.635e-23 Identity = 57/184 (30.98%), Postives = 94/184 (51.09%), Query Frame = 0
Query: 54 EQPGDENASDTLADEPWANQVNGADEELPPARHSPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNR------------------------------SSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
E PG +A D + + + + NG P ++ R + E E+I+ WRE+Q +RL D + K +A ELE+WY + + L +T+++NR ++E+ FV ++++ +PGTEWER+ +LCDFN K+++ KD SR+RS+L+ LKQ P
Sbjct: 67 EPPGGPDAVDGVMNGEYYQESNG-----PTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAP 245
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|116503|sp|P08081.1|CLCA_RAT (RecName: Full=Clathrin light chain A; Short=Lca) HSP 1 Score: 94.7449 bits (234), Expect = 1.306e-22 Identity = 57/184 (30.98%), Postives = 93/184 (50.54%), Query Frame = 0
Query: 54 EQPGDENASDTLADEPWANQVNGADEELPPARHSPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNR------------------------------SSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
E PG +A D + + + + NG P ++ R + E E+I+ WRE+Q +RL D + K +A ELE+WY + + L +T++ NR ++E+ FV ++++ +PGTEWER+ +LCDFN K+++ KD SR+RS+L+ LKQ P
Sbjct: 67 EPPGGPDAVDGVMNGEYYQESNG-----PTDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAVKELEEWYARQDEQLQKTKASNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAP 245
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|116500|sp|P04973.1|CLCA_BOVIN (RecName: Full=Clathrin light chain A; Short=Lca) HSP 1 Score: 92.4337 bits (228), Expect = 1.036e-21 Identity = 56/184 (30.43%), Postives = 93/184 (50.54%), Query Frame = 0
Query: 54 EQPGDENASDTLADEPWANQVNGADEELPPARHSPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNR------------------------------SSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
E PG +A D + + + + NG P ++ R + E E+I+ WRE+Q +RL D + K +A EL++WY + + L +T+++NR ++E+ FV ++ + +PGTEWER+ +LCDFN K+++ KD SR+RS+L+ LKQ P
Sbjct: 62 EPPGIPDAVDGVTNGDYYQESNG-----PTDSYAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELDEWYARQDEQLQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIEESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAP 240
BLAST of AGAP010608-PA vs. SwissProt
Match: gi|26392331|sp|Q9USP6.1|CLC1_SCHPO (RecName: Full=Clathrin light chain; Short=CLC) HSP 1 Score: 60.077 bits (144), Expect = 6.591e-10 Identity = 47/181 (25.97%), Postives = 85/181 (46.96%), Query Frame = 0
Query: 45 AFEADAVLLEQPGDENASDTLADEPWANQVNGADEELPP----ARHSPTLATPR-----------PEVEH---ETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNRSSEKNFVAEMNDITPG-TEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQN 206
A DA E P D++A ++ A Q ++ PP + S T + P+ PE E E ++ W+EDQ +R+ ++DE+ E +A+ ++D+Y+ + D + + +R ++ + E + G T WERI KL D + K + + T R R +L+ L ++
Sbjct: 35 ALGEDAGQFETPEDKDALLNFENDSEAEQTR-FEQNFPPIDAEMQASGTFSAPKAPYMGQAEVHPPEDESGDPEPVRKWKEDQMKRIQERDESSKKLRESNIEKARKAIDDFYENFNDKRDKVIAKSRKEQEKLLEENESKSTGTTSWERILKLIDLSDKPEAHGRSTERFRELLISLAKD 214
BLAST of AGAP010608-PA vs. nr
Match: gi|1279716472|ref|XP_022902657.1| (clathrin light chain isoform X3 [Onthophagus taurus]) HSP 1 Score: 130.568 bits (327), Expect = 4.093e-34 Identity = 64/121 (52.89%), Postives = 85/121 (70.25%), Query Frame = 0
Query: 87 SPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNRSSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
SP L + E E I+ WRE+Q RL +KD+AE E+ + AK ELEDWYK + + + +T++ NR++EK FVA+ N+I PGTEWERI KLCDFN K + KD SR+RSI+LQLKQ+P
Sbjct: 103 SPPLMKHELKEEPEKIRKWREEQVTRLEEKDKAEEIKKEEWREVAKKELEDWYKNHAEQIAKTKAANRNAEKQFVADDNEIEPGTEWERIAKLCDFNPKAKQGSKDVSRMRSIILQLKQSP 223
BLAST of AGAP010608-PA vs. nr
Match: gi|1233198082|ref|XP_022198585.1| (clathrin light chain isoform X3 [Nilaparvata lugens]) HSP 1 Score: 130.568 bits (327), Expect = 4.585e-34 Identity = 68/129 (52.71%), Postives = 85/129 (65.89%), Query Frame = 0
Query: 83 PARHSPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNRSSEKN----FVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
P +S L TP E E IK WREDQK+ L +KD E E+L+ AK EL++WY+ + + + +T++ NR S KN FVAE I PGTEWERI KLCDFN K+ R KD SR+RSI+LQLKQNP
Sbjct: 87 PHVNSSPLKTPVVREEPEKIKKWREDQKKSLEEKDLNEEKKKEELRTAAKSELDEWYRHHEELIAKTRAANRESAKNAEKQFVAESGAIEPGTEWERIAKLCDFNPKSTRTSKDVSRMRSIILQLKQNP 215
BLAST of AGAP010608-PA vs. nr
Match: gi|970919194|ref|XP_015126278.1| (PREDICTED: clathrin light chain isoform X1 [Diachasma alloeum]) HSP 1 Score: 130.568 bits (327), Expect = 4.643e-34 Identity = 79/189 (41.80%), Postives = 108/189 (57.14%), Query Frame = 0
Query: 24 PEVDFDAAASPPPDMSDDVTSAFEADAVLLEQPGDENASDTLADEPWANQVNG-ADEELPPARHSPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNRSSEKN----FVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
P V + A+ P DD++ FE + +E G+ S + N + D E + +P + PR E E IK WRE+Q RL +KD E T E+ + AK ELE+WYK + + +T++ NR S KN FVAE +++ PGTEWERI KLCDFN K++R KD SR+RSI+LQLKQ P
Sbjct: 36 PPVVMNTPATAPAVADDDLSGNFEN--MTIESGGNGTGSFEMI-----NTIEQPTDSEFSASEAAPAPSLPREEPEK--IKKWREEQAARLEEKDAEEETKKEEWREAAKKELEEWYKHHAETTSKTKATNRESAKNAEKQFVAEADEVEPGTEWERIAKLCDFNPKSSRTSKDVSRMRSIILQLKQTP 215
BLAST of AGAP010608-PA vs. nr
Match: gi|766938682|ref|XP_011501858.1| (PREDICTED: clathrin light chain isoform X2 [Ceratosolen solmsi marchali]) HSP 1 Score: 129.798 bits (325), Expect = 5.120e-34 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 0
Query: 92 TPRPEV----EHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNRSSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
TP P V E E IK WRE+QK RL +KD E E + AK EL DWYK +T+ + +T++ NR++EK FVAE +DI PGTEWERI KLCDFN K++R KD S++RSI+LQLKQNP
Sbjct: 82 TPPPSVPIKEEPEKIKKWREEQKARLEEKDAEEEKKKEDWRVAAKKELNDWYKHHTEAISKTKATNRNAEKQFVAEADDIEPGTEWERIAKLCDFNPKSSRTSKDVSKMRSIILQLKQNP 201
BLAST of AGAP010608-PA vs. nr
Match: gi|987912457|ref|XP_015432014.1| (PREDICTED: clathrin light chain isoform X2 [Dufourea novaeangliae]) HSP 1 Score: 130.183 bits (326), Expect = 5.349e-34 Identity = 86/216 (39.81%), Postives = 119/216 (55.09%), Query Frame = 0
Query: 13 MDAFGTDELVDPEVD----FDAAAS----------PPPDMSDDVTSAFEADAV------LLEQPG-DENASDTLADEPWANQVNGADEELPPARHSPTLATPRPEVEHETIKAWREDQKQRLADKDEAEATAMEQLKAQAKGELEDWYKKYTDHLGQTQSDNRSSEKNFVAEMNDITPGTEWERIHKLCDFNQKTNRNQKDTSRLRSILLQLKQNP 207
MDAFG + +++PEVD F A PP MS + D + L PG D S + D V +E PP+ +P + E E I+ WRE+QK RL +KD E E+ + A+ ELE+WYK + + + +T++ NR++EK FVAE +++ PGTEWERI KLCDFN K++R KD SR+RSI+LQLKQ P
Sbjct: 1 MDAFGDNFVIEPEVDPVAEFVAREQDQLAGLEDEIPPVSMSTTTGTNANVDNLPENFGNLKVGPGGDAEGSFEIID-----AVGQTNEIQPPSATETAPKSPPVKEEPEKIRKWREEQKTRLEEKDAEEEKKKEEWREAARKELEEWYKHHAEAISKTKTTNRNAEKQFVAEADEVEPGTEWERIAKLCDFNPKSSRTSKDVSRMRSIILQLKQTP 211 The following BLAST results are available for this feature:
BLAST of AGAP010608-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of AGAP010608-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 10
BLAST of AGAP010608-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold269_size230758:133982..134841+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold269_size230758-snap-gene-1.33 ID=maker-scaffold269_size230758-snap-gene-1.33|Name=AGAP010608-PA|organism=Tigriopus kingsejongensis|type=gene|length=860bp|location=Sequence derived from alignment at scaffold269_size230758:133982..134841+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP010608-PA' has the following synonyms
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