glycine receptor subunit alpha-2-like, maker-scaffold274_size229011-snap-gene-1.20 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000009137 (supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 gene:EMLSAG00000009137 transcript:EMLSAT00000009137 description:"maker-LSalAtl2s575-augustus-gene-0.8") HSP 1 Score: 85.8853 bits (211), Expect = 1.909e-19 Identity = 42/145 (28.97%), Postives = 80/145 (55.17%), Query Frame = 0 Query: 5 CMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIP----AKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSY 145 C M+ K+P DEQ+C + + S+ + ++ L W D+SN V P + + P K + +YS L+ + L+R + +H++Q++IP+I+ V++ W+S ++D ++ GR + + +LLT + + V+ P VSY Sbjct: 153 CQMDFHKYPNDEQLCDIPLESWDTSMDDMKLNW------DLSNSVINPNITLDQFSPLIYFKKYDTQSDMTSYSGLIIRIQLQRLIPYHVIQTFIPSIVFVILGWISLFLDPQAIPGRVKMVMLSLLTSLAMFNSVRDSTPQVSY 291
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000003314 (supercontig:LSalAtl2s:LSalAtl2s181:427820:487404:-1 gene:EMLSAG00000003314 transcript:EMLSAT00000003314 description:"augustus_masked-LSalAtl2s181-processed-gene-4.3") HSP 1 Score: 84.7297 bits (208), Expect = 4.134e-19 Identity = 52/169 (30.77%), Postives = 89/169 (52.66%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEI-FKVIPAKCQETFHI-GNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEF 167 + F C M + FPLD QVC ++ SF+ +++ D D S + + I + +P + Q + GNYS EL L+R + +++ Y+P+ + V++SW+SF + D V GR TL VT L + + + + +P + AI+ W+ C F+F AL+E+ Sbjct: 193 ITFICPMTFNSFPLDVQVCRFQVGSFNYDISKMVFH--DEFIADQSQIRSVLDYFIEIRKLPDEYQHYVALTGNYSVAGFELTLQRKVSHYIITYYLPSGMFVIVSWISFLVPPDIVPGRMTLLVTVFLVLVNIFNTITTNIPKAEGLTAIEAWVIVCVLFVFGALIEY 359
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000011211 (supercontig:LSalAtl2s:LSalAtl2s765:133774:155316:1 gene:EMLSAG00000011211 transcript:EMLSAT00000011211 description:"maker-LSalAtl2s765-snap-gene-1.16") HSP 1 Score: 82.8037 bits (203), Expect = 1.069e-18 Identity = 53/201 (26.37%), Postives = 92/201 (45.77%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIAS---------FSKTTKELILQWKDGLAVDISNEVKMPQ--------FEIFKVIPAKCQET-FHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTS 183 + SC M +PLD C ++ S + K+T +L+ + V S+ Q + F+ +P K + G Y+ ++ L R ++VQ Y+P+ + VV SWVSF + + V GR L VT L + + + V+ P+ S + AID+++ C +F AL+E+ L ++ R+ S Sbjct: 82 ITISCRMMFDDYPLDAHTCQFQVGSCKYQDITRPWGKSTYQLLSDYDSNKTVQCSSSYVYDQIRQRSLQHYITFEELPEKDRSVVLPSGTYAACGFQIQLVRKQMQYLVQVYLPSCMFVVTSWVSFLIKPEVVPGRMALLVTLFLVLINIFNSVRERAPISSKLNAIDLYLVVCIFLVFGALMEYAVILLLLKQRRKPKRS 282
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000001113 (supercontig:LSalAtl2s:LSalAtl2s1186:160345:169896:1 gene:EMLSAG00000001113 transcript:EMLSAT00000001113 description:"maker-LSalAtl2s1186-snap-gene-1.38") HSP 1 Score: 83.5741 bits (205), Expect = 1.138e-18 Identity = 65/235 (27.66%), Postives = 107/235 (45.53%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDG----------LAVDISNEVKMPQFEIFKVIPAKCQETF---HIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTSRHFN-----KEKQQMQAIRTPSPPSTSENGGRGE--VGL 215 + F C M KFPLD QVC ++ S S ++ ++ +A+D ++KM +K + F +GN+S EL L R + +++ Y+P+ L V++SW+SF + +D + GR L VT L + + + V P + AI+ WM AC F+F AL+E + L+++ R N K+ + + PP+ G E VGL Sbjct: 195 ITFICPMRFDKFPLDTQVCKFQVGSCSYDDTKMRFMTENAGYQSPKTANSIALDYDIQIKML---------SKEDQVFLGGGLGNFSLAGFELVLHRYVSTYIITYYLPSGLFVIVSWISFLIPMDVIPGRMALLVTLFLVLVNIFNTVTTNTPKAEGLTAIEAWMLACILFVFGALIE--YXAILFKKQRHVSAQHKLNIRVVCKDNLKYEVHEQRPPPTRDVKGTHTETLVGL 418 HSP 2 Score: 53.1434 bits (126), Expect = 2.330e-8 Identity = 34/111 (30.63%), Postives = 54/111 (48.65%), Query Frame = 0 Query: 99 LIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTSRHFN-----KEKQQMQAIRTPSPPST 204 L V++SW+SF + +D + GR L V L + + + V P + AI+ WM AC F+F AL+E +A L+++ R N K+ + + PPST Sbjct: 418 LFVIVSWISFLIPMDVIPGRMGLLVMLFLVLVNIFNTVTTNTPKAEGLTAIEAWMLACILFVFGALIE--YAAILFKKQRYVSAQNKLNIRIVWKDNLKYEVYEQRPPPST 526
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000003185 (supercontig:LSalAtl2s:LSalAtl2s176:68925:134641:-1 gene:EMLSAG00000003185 transcript:EMLSAT00000003185 description:"maker-LSalAtl2s176-augustus-gene-1.7") HSP 1 Score: 81.2629 bits (199), Expect = 6.116e-18 Identity = 48/178 (26.97%), Postives = 86/178 (48.31%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGL--------AVDISNEVKMPQFEIFKVIPAKCQETFH---IGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEF 167 + F C M FPLD Q C ++ S+S ++ + A+ + ++++ ++ +I +H +GNYS E+ L R + +++ Y+P+ L VV+SW+SF + + GR L +T L + + + V P + AI+ WM AC F+F AL+E+ Sbjct: 162 ITFICPMRFDAFPLDTQRCKFQVGSYSYDDTKMRFAGSPRVTGYAEXSRAIVLDYDIQIKSLKMKDMI-------YHSGTLGNYSLAGFEMVLHRYVSHYIITYYLPSGLFVVVSWISFVVPPTVIPGRMALLITLFLVLVNIFNSVTTNTPKAEGLTAIEAWMLACILFVFGALVEY 332
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|62901525|sp|Q94900.2|GLUCL_DROME (RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl; Flags: Precursor) HSP 1 Score: 179.489 bits (454), Expect = 1.329e-52 Identity = 81/197 (41.12%), Postives = 120/197 (60.91%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTSRHFNKEKQQMQAIR 197 L +C M L +PLD Q+C++ +AS+ TT +L+ WK+G V + + +P+F + K + C + G YSCL +L KR ++++Q YIP ++V++SWVSFW+D +V R +LGVTTLLT++++ S + A +P VSY KAID+W G C F+F ALLEF NY R G S N K+ M+ R Sbjct: 159 LTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSG-----SNKANMHKESMKKKR 350
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|121580|sp|P24524.1|GLRA3_RAT (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 176.022 bits (445), Expect = 3.295e-51 Identity = 77/197 (39.09%), Postives = 129/197 (65.48%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAK-CQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTSRHFNKEKQQMQAI 196 L SC M+L FP+D Q C M++ SF T +LI +W+D V ++ + +PQF + + + C + ++ G ++C+ HL+R +G++++Q YIP++LIV++SWVSFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+F+ALLE+ N++ R+ + R K K + A+ Sbjct: 167 LTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFAL 363
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 176.022 bits (445), Expect = 3.624e-51 Identity = 77/197 (39.09%), Postives = 129/197 (65.48%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAK-CQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTSRHFNKEKQQMQAI 196 L SC M+L FP+D Q C M++ SF T +LI +W+D V ++ + +PQF + + + C + ++ G ++C+ HL+R +G++++Q YIP++LIV++SWVSFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+F+ALLE+ N++ R+ + R K K + A+ Sbjct: 167 LTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFAL 363
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|116242496|sp|O75311.2|GLRA3_HUMAN (RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 176.022 bits (445), Expect = 3.624e-51 Identity = 77/197 (39.09%), Postives = 129/197 (65.48%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAK-CQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTSRHFNKEKQQMQAI 196 L SC M+L FP+D Q C M++ SF T +LI +W+D V ++ + +PQF + + + C + ++ G ++C+ HL+R +G++++Q YIP++LIV++SWVSFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+F+ALLE+ N++ R+ + R K K + A+ Sbjct: 167 LTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFAL 363
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN (RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 174.481 bits (441), Expect = 6.307e-51 Identity = 76/180 (42.22%), Postives = 126/180 (70.00%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQW-KDGLAVDISNEVKMPQFEIFKVIP-AKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L SC+M+L FP+D Q CTM++ SF T K+L+ +W +D AV ++ + +PQF + C + ++ G ++C+ + HL+R +G++++Q YIP++LIV++SWVSFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+FAALLE+ N++ R+ + Sbjct: 168 LILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINFVSRQHK 347
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|116242495|sp|P23415.2|GLRA1_HUMAN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 174.096 bits (440), Expect = 1.764e-50 Identity = 72/179 (40.22%), Postives = 126/179 (70.39%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAK-CQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L +C M+L FP+D Q C M++ SF T +LI +W++ AV +++ + +PQF + + + C + ++ G ++C+ A HL+R +G++++Q YIP++LIV++SW+SFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+F+ALLE+ N++ R+ + Sbjct: 162 LTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 340
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|12644526|sp|P57695.1|GLRA1_BOVIN (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 174.096 bits (440), Expect = 1.840e-50 Identity = 72/179 (40.22%), Postives = 126/179 (70.39%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAK-CQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L +C M+L FP+D Q C M++ SF T +LI +W++ AV +++ + +PQF + + + C + ++ G ++C+ A HL+R +G++++Q YIP++LIV++SW+SFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+F+ALLE+ N++ R+ + Sbjct: 162 LTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 340
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|6647527|sp|O93430.1|GLRA1_DANRE (RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor) HSP 1 Score: 173.326 bits (438), Expect = 2.612e-50 Identity = 77/195 (39.49%), Postives = 130/195 (66.67%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAK-CQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR---RGHTSRHFNKEKQ 191 L +C M+L FP+D Q C M++ SF T +LI +W + AV +++ + +PQF + + + C + ++ G ++C+ A HL+R +G++++Q YIP++LIV++SWVSFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+F+ALLE+ N++ R+ + R R KE + Sbjct: 158 LVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQHKELLRFQRRRRHLKEDE 352
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|12644459|sp|Q64018.2|GLRA1_MOUSE (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 173.326 bits (438), Expect = 2.930e-50 Identity = 72/179 (40.22%), Postives = 126/179 (70.39%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAK-CQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L +C M+L FP+D Q C M++ SF T +LI +W++ AV +++ + +PQF + + + C + ++ G ++C+ A HL+R +G++++Q YIP++LIV++SW+SFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+F+ALLE+ N++ R+ + Sbjct: 162 LTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 340
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|12230887|sp|P07727.4|GLRA1_RAT (RecName: Full=Glycine receptor subunit alpha-1; AltName: Full=Glycine receptor 48 kDa subunit; AltName: Full=Glycine receptor strychnine-binding subunit; Flags: Precursor) HSP 1 Score: 173.326 bits (438), Expect = 3.188e-50 Identity = 72/179 (40.22%), Postives = 126/179 (70.39%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAK-CQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L +C M+L FP+D Q C M++ SF T +LI +W++ AV +++ + +PQF + + + C + ++ G ++C+ A HL+R +G++++Q YIP++LIV++SW+SFW+++D+ R LG+TT+LT+++++S +A +P VSYVKAIDIWM C F+F+ALLE+ N++ R+ + Sbjct: 162 LTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK 340
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|939662462|ref|XP_014278936.1| (PREDICTED: glycine receptor subunit alpha-2-like [Halyomorpha halys]) HSP 1 Score: 275.404 bits (703), Expect = 5.003e-88 Identity = 132/203 (65.02%), Postives = 159/203 (78.33%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRR-GRRGHTSRHFNKEKQQMQAIRTPSPP 202 L FSCMM+LSKFPLD QVCTME+ASFSKT +EL L+WK+ V + +KMPQFEI K+ + CQE+F IGNYSCL+AE +L RS+GFH+VQSY+PTILIVVISWVSFWMDVDSV GRTTLGVTTLL VSS+++ +Q+ +P VSYVKAID+WMG CTAF+F ALLEFTF NY WR+ GR S N E + + P+ P Sbjct: 144 LTFSCMMDLSKFPLDSQVCTMEVASFSKTIEELRLEWKNVRPVIMGKGLKMPQFEIVKIAASDCQESFQIGNYSCLVAEFYLSRSVGFHLVQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSAGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTFVNYKWRKVGRPPMQSYRVNGE---VATVDLPTDP 343
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1229990096|ref|XP_022176180.1| (glycine receptor subunit beta-type 4-like isoform X2 [Myzus persicae]) HSP 1 Score: 271.552 bits (693), Expect = 3.184e-87 Identity = 121/178 (67.98%), Postives = 151/178 (84.83%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L FSCMM+LSKFPLD Q+CTME+ASFSKT +EL L+WK+ V ++ ++MPQFEI ++P+ CQE+F IGNYSCL+A+ +L RS+GFH+VQSY+PT+LIVVISWVSFWMDVDSV GRTTLGVTTLL V S++S +Q+ +P VSYVKAID+WMG CTAF+F ALLEFT NY+WR+ R Sbjct: 79 LTFSCMMDLSKFPLDNQICTMEVASFSKTIEELRLEWKNTDPVLMAKGLRMPQFEIVNIVPSDCQESFQIGNYSCLVAQFYLSRSVGFHLVQSYLPTMLIVVISWVSFWMDVDSVPGRTTLGVTTLLAVGSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTVVNYMWRKLR 256
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|985420883|ref|XP_015375849.1| (PREDICTED: glycine receptor subunit beta-type 4-like [Diuraphis noxia]) HSP 1 Score: 271.552 bits (693), Expect = 3.399e-87 Identity = 121/178 (67.98%), Postives = 151/178 (84.83%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L FSCMM+LSKFPLD Q+CTME+ASFSKT +EL L+WK+ V ++ ++MPQFEI ++P+ CQE+F IGNYSCL+A+ +L RS+GFH+VQSY+PT+LIVVISWVSFWMDVDSV GRTTLGVTTLL V S++S +Q+ +P VSYVKAID+WMG CTAF+F ALLEFT NY+WR+ R Sbjct: 79 LTFSCMMDLSKFPLDNQICTMEVASFSKTIEELRLEWKNTDPVLMAKGLRMPQFEIVDIVPSDCQESFQIGNYSCLVAQFYLSRSVGFHLVQSYLPTMLIVVISWVSFWMDVDSVPGRTTLGVTTLLAVGSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTVVNYMWRKLR 256
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1028713732|ref|XP_016661210.1| (PREDICTED: glycine receptor subunit beta-type 4-like [Acyrthosiphon pisum]) HSP 1 Score: 271.552 bits (693), Expect = 4.365e-87 Identity = 121/178 (67.98%), Postives = 151/178 (84.83%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L FSCMM+LSKFPLD Q+CTME+ASFSKT +EL L+WK+ V ++ ++MPQFEI ++P+ CQE+F IGNYSCL+A+ +L RS+GFH+VQSY+PT+LIVVISWVSFWMDVDSV GRTTLGVTTLL V S++S +Q+ +P VSYVKAID+WMG CTAF+F ALLEFT NY+WR+ R Sbjct: 79 LTFSCMMDLSKFPLDNQICTMEVASFSKTIEELRLEWKNTDPVLMAKGLRMPQFEIVDIVPSDCQESFQIGNYSCLVAQFYLSRSVGFHLVQSYLPTMLIVVISWVSFWMDVDSVPGRTTLGVTTLLAVGSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTVVNYMWRKLR 256
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1330929822|gb|PNF41132.1| (hypothetical protein B7P43_G04520, partial [Cryptotermes secundus]) HSP 1 Score: 267.314 bits (682), Expect = 5.404e-87 Identity = 126/176 (71.59%), Postives = 151/176 (85.80%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRR 176 L FSCMM+LSKFPLD QVCTME+ASFSKT +EL L+WK V + ++MPQFEI K+ + CQE+FHIGNYSCL+AE HL RS+GFH++QSY+PTILIVVISWVSFWMDVDSV GRTTLGVTTLL VSS++S +Q+ +P VSYVKAID+WMG CTAF+F+ALLEFTF NY+WR+ Sbjct: 6 LTFSCMMDLSKFPLDSQVCTMEVASFSKTIEELSLEWKTMNPVIMGKGLRMPQFEIVKIAASDCQESFHIGNYSCLVAEFHLSRSVGFHLIQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFSALLEFTFVNYMWRK 181
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1229990084|ref|XP_022176179.1| (glycine receptor subunit beta-type 4-like isoform X1 [Myzus persicae]) HSP 1 Score: 272.322 bits (695), Expect = 7.459e-87 Identity = 121/178 (67.98%), Postives = 151/178 (84.83%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGR 178 L FSCMM+LSKFPLD Q+CTME+ASFSKT +EL L+WK+ V ++ ++MPQFEI ++P+ CQE+F IGNYSCL+A+ +L RS+GFH+VQSY+PT+LIVVISWVSFWMDVDSV GRTTLGVTTLL V S++S +Q+ +P VSYVKAID+WMG CTAF+F ALLEFT NY+WR+ R Sbjct: 126 LTFSCMMDLSKFPLDNQICTMEVASFSKTIEELRLEWKNTDPVLMAKGLRMPQFEIVNIVPSDCQESFQIGNYSCLVAQFYLSRSVGFHLVQSYLPTMLIVVISWVSFWMDVDSVPGRTTLGVTTLLAVGSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTVVNYMWRKLR 303
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1339066660|ref|XP_023726341.1| (glycine receptor subunit alpha-2-like isoform X2 [Cryptotermes secundus]) HSP 1 Score: 267.314 bits (682), Expect = 9.802e-86 Identity = 126/176 (71.59%), Postives = 151/176 (85.80%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRR 176 L FSCMM+LSKFPLD QVCTME+ASFSKT +EL L+WK V + ++MPQFEI K+ + CQE+FHIGNYSCL+AE HL RS+GFH++QSY+PTILIVVISWVSFWMDVDSV GRTTLGVTTLL VSS++S +Q+ +P VSYVKAID+WMG CTAF+F+ALLEFTF NY+WR+ Sbjct: 79 LTFSCMMDLSKFPLDSQVCTMEVASFSKTIEELSLEWKTMNPVIMGKGLRMPQFEIVKIAASDCQESFHIGNYSCLVAEFHLSRSVGFHLIQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFSALLEFTFVNYMWRK 254
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1233179052|ref|XP_022190972.1| (glycine receptor subunit beta-type 4-like [Nilaparvata lugens]) HSP 1 Score: 268.085 bits (684), Expect = 1.040e-85 Identity = 128/189 (67.72%), Postives = 154/189 (81.48%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTSRHFNKE 189 L FSCMM+LSKFPLD Q+CTME+ASFSKT +EL L+WK V + ++MPQFEI ++IP+ CQE+F IGNYSCL+AE +L RS+GFH+VQSY+PTILIVVISWVSFWMDVDSV GRTTLGVTTLL VSS++S +Q+ +P VSYVKAID+WMG CTAF+F ALLEFTF NY+WR+ R F E Sbjct: 79 LTFSCMMDLSKFPLDNQICTMEVASFSKTIEELRLEWKTMNPVIMGKGLRMPQFEIVEIIPSDCQESFQIGNYSCLVAEFYLSRSVGFHLVQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFCALLEFTFVNYMWRKLSPDILKRTFVPE 267
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1061478751|gb|ODM96329.1| (Glutamate-gated chloride channel, partial [Orchesella cincta]) HSP 1 Score: 266.159 bits (679), Expect = 2.328e-85 Identity = 135/249 (54.22%), Postives = 169/249 (67.87%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRRGRRGHTSRHFNKEKQQMQAIRTPSPPSTSENGGRGEVGLHRLRHSPDGDNEEGAELNGNLQTEVVRADNGMHG 249 + FSCMM+LSKFPLD Q CTME+ASFSKT +ELIL WK+ V N + M QFE+ ++ +CQE+F IGNYSCL+AE HL RSLGFH+VQSY+PTIL+VVISWVSFWMDV+SV GR TLGVTTLLTVSSKA+++Q +P SYVKAID+WMG CTAF+F ALLEFT NYLWR+ R+F + R SP + +++ G+ DN++ L E +N +HG Sbjct: 68 VTFSCMMDLSKFPLDRQTCTMEVASFSKTVEELILAWKEDNPVTTGN-LGMSQFELVAIVTDRCQESFQIGNYSCLVAEFHLSRSLGFHLVQSYLPTILMVVISWVSFWMDVNSVPGRVTLGVTTLLTVSSKATNIQENLPQASYVKAIDVWMGTCTAFVFLALLEFTVVNYLWRK----ECCRNFRRA-------RAYSPDAITKDLLDGQ------------DNDKPPSPCNTLVKECSTKENKIHG 292
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1339066656|ref|XP_023726328.1| (glycine receptor subunit alpha-3-like isoform X1 [Cryptotermes secundus] >gi|1339066658|ref|XP_023726335.1| glycine receptor subunit alpha-3-like isoform X1 [Cryptotermes secundus]) HSP 1 Score: 266.929 bits (681), Expect = 3.441e-85 Identity = 126/176 (71.59%), Postives = 151/176 (85.80%), Query Frame = 0 Query: 1 LKFSCMMELSKFPLDEQVCTMEIASFSKTTKELILQWKDGLAVDISNEVKMPQFEIFKVIPAKCQETFHIGNYSCLLAELHLKRSLGFHMVQSYIPTILIVVISWVSFWMDVDSVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFANYLWRR 176 L FSCMM+LSKFPLD QVCTME+ASFSKT +EL L+WK V + ++MPQFEI K+ + CQE+FHIGNYSCL+AE HL RS+GFH++QSY+PTILIVVISWVSFWMDVDSV GRTTLGVTTLL VSS++S +Q+ +P VSYVKAID+WMG CTAF+F+ALLEFTF NY+WR+ Sbjct: 79 LTFSCMMDLSKFPLDSQVCTMEVASFSKTIEELSLEWKTMNPVIMGKGLRMPQFEIVKIAASDCQESFHIGNYSCLVAEFHLSRSVGFHLIQSYLPTILIVVISWVSFWMDVDSVPGRTTLGVTTLLAVSSQSSGIQSGLPQVSYVKAIDVWMGTCTAFVFSALLEFTFVNYMWRK 254 The following BLAST results are available for this feature:
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glycine receptor subunit alpha-2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold274_size229011:187440..189828+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold274_size229011-snap-gene-1.20 ID=maker-scaffold274_size229011-snap-gene-1.20|Name=glycine receptor subunit alpha-2-like|organism=Tigriopus kingsejongensis|type=gene|length=2389bp|location=Sequence derived from alignment at scaffold274_size229011:187440..189828+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glycine receptor subunit alpha-2-like' has the following synonyms
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