cleavage and polyadenylation specificity factor subunit 2, maker-scaffold281_size224178-snap-gene-1.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. L. salmonis genes
Match: EMLSAG00000011843 (supercontig:LSalAtl2s:LSalAtl2s831:281816:286361:1 gene:EMLSAG00000011843 transcript:EMLSAT00000011843 description:"snap_masked-LSalAtl2s831-processed-gene-2.5") HSP 1 Score: 971.459 bits (2510), Expect = 0.000e+0 Identity = 485/771 (62.91%), Postives = 591/771 (76.65%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMK---VNAPGKTQQKT-FFKAIKTKHMMFPFVDEK-IKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGKDG-LLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK PLSGG PHCYLLEVD + FL D GWD F+ + EIK V +KIDAVLLSYPD+ HLG LPY V LGLSC I+ATVP++KMGQMFMYD+Y+A+ EDF LFTLDEVD F+ ITQLKYNQT LKGKGEGI+ITPIPAGHMIGG+IWKIVK+GEEDI+YAVDFNHKKE+HLNG D++K+ RPS+ ITD FN QLRRR RDEK+MTNILQTLRNNGNVL+C DTAGRVLELAHM+D LWQ +DSGL+AYSLAL+NN S++V+EFAKSQIEWMS+KLM+ FEG+RNNPFQFKHLKLCHSM EVNKVPSPKVVLASM D+E G+SR+LF+ WC P+N+II+TSR+ TLA+DL+T G+ R + LEIKKR++LTG ELEE+ + EL K + ++ DESSD+EME G KHDIIMK +NA + KT FF+++K K +FP +EK I+WDDYGEIV+ EDW+D + Q + ++ + D+ +I EVPTKCV+S +KAQ+QFIDFEGRS+G+SI+K+LQQ+KPR++I+VRG ++C+ L N C+Q+ K QQ+++VY+P+NGE +D TTESFIYQV+L ESLV L +S GKDG LAWVDG I+ D+ ADI P D+ D+A EE KKP IP L P D H FVNELKLSDFK +LTK+GISSEF GGVLFCG+G VALRRHDSGR+TIEG++C +YYRVR+LLYEQYAIV Sbjct: 1 MTSIIKMCPLSGGRSEG------PHCYLLEVDDYNFLLDVGWDPFFNSKLKKEIKKVASKIDAVLLSYPDLDHLGALPYAVGKLGLSCSIFATVPVHKMGQMFMYDVYEAQRKQEDFDLFTLDEVDSAFDKITQLKYNQTFALKGKGEGISITPIPAGHMIGGTIWKIVKDGEEDIIYAVDFNHKKERHLNGCDLDKLLRPSILITDAFNIGCHQLRRRVRDEKIMTNILQTLRNNGNVLICTDTAGRVLELAHMVDQLWQNRDSGLLAYSLALVNNFSYSVVEFAKSQIEWMSEKLMKTFEGKRNNPFQFKHLKLCHSMNEVNKVPSPKVVLASMPDMESGYSRELFIQWCTNPKNSIILTSRSPANTLAYDLMTKGSGRTIELEIKKRVELTGTELEEYNKHRDELIVKKSLTSVLNGGDESSDDEMEISGK----KHDIIMKNDPMNANDVPKGKTGFFRSMKAKFPIFPTHEEKVIRWDDYGEIVRSEDWLDIS----QSTENSNVKQNNEIKDDRSNIQSEVPTKCVTSKHSFHIKAQIQFIDFEGRSEGDSILKLLQQIKPRKVIVVRGTPEKCDTLKNFCEQIALKG------DQQRIDVYSPENGEVLDVTTESFIYQVRLTESLVKSLEYSTGKDGSQLAWVDGVINLLTDDSADIIP-DEEDDAFEEPSLKKPRIPQLDSAPLDLQCNHQATFVNELKLSDFKAILTKNGISSEFQGGVLFCGDGFVALRRHDSGRITIEGSLCSEYYRVRELLYEQYAIV 750
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. L. salmonis genes
Match: EMLSAG00000000010 (supercontig:LSalAtl2s:LSalAtl2s1003:5798:7615:-1 gene:EMLSAG00000000010 transcript:EMLSAT00000000010 description:"augustus_masked-LSalAtl2s1003-processed-gene-0.0") HSP 1 Score: 132.109 bits (331), Expect = 2.225e-32 Identity = 115/467 (24.63%), Postives = 203/467 (43.47%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQF-------DMNIMNEIKA--VINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNME-DFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRV-----LNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNAPGKT 469 MT I+ PL G S C L+ + + DCG + D + + + + +DAV++S+ + H G LPY+ +G S PIY T P + + + D+ + + + FT + + + + + +Q I++ E + I AGH++G ++++ VK G IVY D+N ++HL + I+K RP L IT+ A+ + +R R+ + + + G VL+ V GR EL +++ W D + + ++ + K I W ++K+ + F R N F FK +K N P P VV A+ L G S +F WC N II+ GT+ H ++ NGT ++ +E+K ++ + +L S + +M+ E + +ME K +H + + A G+T Sbjct: 1 MTEEIRVTPLGAGQDVGRS------CLLVSIGGKNLMLDCGMHMGYNDERRFPDFSFIEDTPGAPLTPHLDAVIISHFHLDHCGALPYMTEMVGYSGPIYMTHPTKAIAPILLEDMRRVAVERKGESNFFTSAMIKECMKKVVAVHLHQVIRVD---ESLEIKAYYAGHVLGAAMFQ-VKVGNRSIVYTGDYNMTPDRHLGAAWIDKC-RPDLLITESTYATTVRDSKRCRERDFLKKVHDCVERGGKVLIPVFALGRAQELCILLETYW---DRMNLKVPIFFSTGLTEKATNYYKMFITWTNEKIRKTFVER--NMFDFKFIKPLDRAYIQN--PGPMVVFATPGMLHGGLSLAIFEEWCTNELNMIIMPGYCVAGTVGHKIL-NGTRKLEFSKGKTVEVKMSVQYMSFSAHADAKGIMQLISYCEPKNVMLVHGEQA--KMEFLKAKIESEHGVQCFMPANGET 446
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. L. salmonis genes
Match: EMLSAG00000007282 (supercontig:LSalAtl2s:LSalAtl2s409:129273:131364:-1 gene:EMLSAG00000007282 transcript:EMLSAT00000007282 description:"maker-LSalAtl2s409-augustus-gene-1.22") HSP 1 Score: 118.627 bits (296), Expect = 7.976e-28 Identity = 89/374 (23.80%), Postives = 171/374 (45.72%), Query Frame = 0 Query: 24 FRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFD----MNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLIT 393 FRPL G S C+LLE L DCG + ++ I+A ++ID +L+S+ + H G LP+ + ++ T + + + D + + L++ +++ + E I L +++ ++KG I AGH++G ++ I G + Y DF+ ++++HL + + +P + I + + +R DR+ + + + + G L+ V GR EL ++D W L + ++++ + ++ + M++++ R NNPF FKH+ + + V P V+LAS ++ G SR+LF +WC P+N I+ EGTLA +++ Sbjct: 13 FRPLGAGQEVGRS------CHLLEFKDKRILLDCGIHPGLSGMDALPFVDLIEA--DEIDLLLVSHFHLDHAGALPWFLEKTTFKGKVFMTHATKAIYRWLLSDYIKVSNISTEQMLYSEQDLEASMEKIQTLNFHEEKEVKG----IRFWAYNAGHVLGAXMFMIEIAGVRTL-YTGDFSREEDRHLMAXEXPSL-KPHVLILESTYGTNIHEKREDRESRFTSTVHDIVTRGGRCLIPVFALGRAQELLLILDEYWGAHPE-LHEIPIYYASSLAKKCMAVYQTFVNAMNERIRRQIS--VNNPFVFKHISNLKGIDHFDDV-GPCVILASPGMMQSGLSRELFESWCSDPKNGCIVAGYCVEGTLAKHILS 368 HSP 2 Score: 51.6026 bits (122), Expect = 7.880e-7 Identity = 32/114 (28.07%), Postives = 55/114 (48.25%), Query Frame = 0 Query: 516 PKADPYLRGHPNDADEGKDIVEVPTKCVS-SVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVD 628 PK + G+ + K I+ P + S + QK+PLK QV +I F +D + ++++KP +ILV G ++ + L + A E K++ Y P+N +VD Sbjct: 347 PKNGCIVAGYCVEGTLAKHILSEPEEVASMNGQKLPLKMQVNYISFSAHTDYKQTSGFIRELKPPHVILVHGEANEMSRLKS------ALIREYEADPSTKIDFYNPRNTVSVD 454
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|384872669|sp|O13794.2|YSH1_SCHPO (RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA 3'-end-processing protein ysh1) HSP 1 Score: 130.954 bits (328), Expect = 3.727e-30 Identity = 96/397 (24.18%), Postives = 198/397 (49.87%), Query Frame = 0 Query: 15 PIAMTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFD----MNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQ-ARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKK 406 P+ + +++F L G + C++++ T + D G + + +E ++ +D +L+S+ + H+ LPYV+ ++ T P + + + D + + MED +L+ ++ F+ I + Y+ TI++ EGI TP AGH++G ++ + G +I++ D++ ++++HL+ +++ +RP + IT+ + R +++ +L+ I T+RN G VL+ V GR EL ++D W L + + ++++ + ++ + M+D + + F R NPF F+ +K ++ + + + P V+LAS L+ G SR L W P+N +++T + EGT+A ITN +++L +K Sbjct: 12 PVDPSDLLEFINLGAG------NEVGRSCHVIQYKGKTVMLDAGVHPAYTGLSALPFFDEFD--LSTVDVLLISHFHLDHVASLPYVMQKTNFRGRVFMTHPTKAVCKWLLSDYVKVSNVGMED-QLYDEKDLLAAFDRIEAVDYHSTIEV----EGIKFTPYHAGHVLGACMYFVEMAGV-NILFTGDYSREEDRHLHVAEVPP-KRPDVLITESTYGTASHQPRLEKEARLLNIIHSTIRNGGRVLMPVFALGRAQELLLILDEYWN-NHLDLRSVPIYYASSLARKCMAIFQTYVNMMNDNIRKIFAER--NPFIFRFVKSLRNLEKFDDI-GPSVILASPGMLQNGVSRTLLERWAPDPRNTLLLTGYSVEGTMAKQ-ITNEPIEIVSLSGQK 388
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|74637743|sp|Q6FUA5.1|YSH1_CANGA (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1) HSP 1 Score: 126.716 bits (317), Expect = 9.614e-29 Identity = 91/382 (23.82%), Postives = 178/382 (46.60%), Query Frame = 0 Query: 23 KFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCG----WDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQA------RYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALL--NNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLI 392 +F L GG + C++++ T + D G + + ++ I +D +L+S+ + H LPYV+ ++ T P + + + D + N ED L++ +++ ++F+ I + Y+ I + G I T AGH++G ++++I G +++ D++ + ++HLN +++ + L + F + + R R++KL I T+ G VL+ V GR EL ++D W L + + + +N++ + ++ + M+D + + F + NPF FK++ ++ E P V+LAS L+ G SRDL WC +N ++IT + EGT+A L+ Sbjct: 11 RFFSLGGG------NEVGRSCHIIQFKGKTIMLDAGIHPAYQGMASLPFYDDFDLSI--VDVLLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKAIYRWLLRDFVRVTSIGSQSSNAEDDNLYSNEDLIESFDKIETIDYHSMIDVNG----IKFTAFHAGHVLGAAMFQIEIAGLR-VLFTGDYSREIDRHLNSAEVPPLPSDILIVESTFGTATHEPRLH-REKKLTQLIHSTVNKGGRVLMPVFALGRAQELMLILDEYWSQHKEELGSNQIPIFYASNLARKCLSVFQTYVNMMNDNIRKKFRDSQTNPFIFKNIAYIKNLDEFQDF-GPSVMLASPGMLQNGLSRDLLERWCPDEKNLVLITGYSVEGTMAKYLL 377
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|74644951|sp|Q06224.1|YSH1_YEAST (RecName: Full=Endoribonuclease YSH1; AltName: Full=Yeast 73 kDa homolog 1; AltName: Full=mRNA 3'-end-processing protein YSH1) HSP 1 Score: 125.946 bits (315), Expect = 1.535e-28 Identity = 91/384 (23.70%), Postives = 179/384 (46.61%), Query Frame = 0 Query: 19 TSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCG----WDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQAR--------YNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALL--NNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLA 388 T+ KF L G S+ C++L+ T + D G + + +E ++K+D +L+S+ + H LPYV+ ++ T P + + + D + +D LF+ +++ +F+ I + Y+ T+ + G I T AGH++G ++++I G +++ D++ + ++HLN +++ + L + F + + R +R+ KL I T+ G VL+ V GR E+ ++D W L + + +N++ + ++ + M+D + + F + NPF FK++ ++ + P V+LAS L+ G SRDL WC + +N ++IT + EGT+A Sbjct: 6 TTTFKFFSLGG------SNEVGRSCHILQYKGKTVMLDAGIHPAYQGLASLPFYDEFD--LSKVDILLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTKDEGLFSDEDLVDSFDKIETVDYHSTVDVNG----IKFTAFHAGHVLGAAMFQIEIAGLR-VLFTGDYSREVDRHLNSAEVPPLSSNVLIVESTFGTATHE-PRLNRERKLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILDEYWSQHADELGGGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFRDSQTNPFIFKNISYLRNLEDFQDF-GPSVMLASPGMLQSGLSRDLLERWCPEDKNLVLITGYSIEGTMA 374
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|442570103|sp|Q74ZC0.2|YSH1_ASHGO (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1) HSP 1 Score: 123.635 bits (309), Expect = 9.154e-28 Identity = 81/327 (24.77%), Postives = 161/327 (49.24%), Query Frame = 0 Query: 75 INKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARY-------NMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALL--NNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLI 392 +++++ +L+S+ + H LPYV+ ++ T P + + + D + + D L+T +++ ++F+ I + Y+ TI + G I T AGH++G +++++ G I++ D++ + ++HLN ++I + L + F + + R +++KL I T+ G VL+ V GR E+ ++D W L + + +N++ + ++ + M+DK+ + F + NPF FK++ ++ E P V+LAS L+ G SRDL WC +N ++IT + EGT+A L+ Sbjct: 60 LSQVEVLLISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLSDFVKVTNIGNDNAGGVSDENLYTDEDLAESFDRIETVDYHSTIDVNG----IKFTAYHAGHVLGAAMFQVEIAGLR-ILFTGDYSRELDRHLNSAEIPTLPSDILIVESTFGTATHE-PRTSKEKKLTQLIHTTVSKGGRVLLPVFALGRAQEIMLILDEYWSQHAEQLGNGQVPIFYASNLARKCMSVFQTYVNMMNDKIRKKFRDSQTNPFIFKNISYLKNLDEFQDF-GPSVMLASPGMLQNGLSRDLLEKWCPDEKNLVLITGYSVEGTMAKFLM 379
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Match: gi|74703664|sp|Q4PEJ3.1|YSH1_USTMA (RecName: Full=Endoribonuclease YSH1; AltName: Full=mRNA 3'-end-processing protein YSH1) HSP 1 Score: 122.094 bits (305), Expect = 3.361e-27 Identity = 90/360 (25.00%), Postives = 169/360 (46.94%), Query Frame = 0 Query: 43 CYLLEVDQFTFLCDCGWDAQFD----MNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLS---CPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQ---DSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLI 392 C +L+ T +CD G F + ++E+ + +DA+L+++ + H L Y++ +Y T P + + M D + D LF +E+ ++ I + ++Q + + G G+ T AGH++G ++ I G I+Y DF+ ++++HL ++I + +P + I + + R D++ + + I ++ G VL+ V GR EL ++D W S I Y+ AL I ++ I M+D + F RR+NPF FKH+ S+ + P V++AS ++ G SR+L W +N +I++ + EGT+A +++ Sbjct: 39 CCVLKYRGKTIVCDTGVHPAFTGIAALPFIDELD--WSTVDAILITHFHLDHAAALTYIMEKTNFRDGHGKVYMTHPTKAVYRFLMSDFVRISNAGNDDNLFDENEMLASWRQIEAVDFHQDVSIAG---GLRFTSYHAGHVLGACMFLIEIAGLR-ILYTGDFSREEDRHLVQAEIPPV-KPDVLICESTYGTQTHEPRLDKEHRFTSQIHHIIKRGGRVLLPVFVLGRAQELLLLLDEYWAAHPELHSVPIYYASALAKK----CISVYQTYIHTMNDHIRTRF-NRRDNPFVFKHISNLRSLEKFED-RGPCVMMASPGFMQSGVSRELLERWAPDKRNGLIVSGYSVEGTMARNIL 385
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|987914698|ref|XP_015433252.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Dufourea novaeangliae] >gi|1016164024|gb|KZC11186.1| putative cleavage and polyadenylation specificity factor subunit 2 [Dufourea novaeangliae]) HSP 1 Score: 900.197 bits (2325), Expect = 0.000e+0 Identity = 449/772 (58.16%), Postives = 565/772 (73.19%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKADPYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRIS----FALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+IIITSRT GTLA DL+ G NR + LE+++RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI++PED+ E L DA ++ ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AW+D I+ D VAD Q D D++ I TL PLP +EV H T F+NELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAVSGAM-----DESPP-CYVLQVDELRILLDCGWDENFDQEFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKIGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIIITSRTSPGTLARDLVEKGGNRNITLEVRRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDYKIAETMPEVEDNKENLETKQEDAAHHPEVATDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSPNDTEILAQQAQSAGAR-------------VFLPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWIDAMITARDQVCRDAVADTQQDDTIDQS--------DKILTLEPLPLNEVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCLSEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|1059869929|ref|XP_017789784.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Habropoda laboriosa]) HSP 1 Score: 899.812 bits (2324), Expect = 0.000e+0 Identity = 452/775 (58.32%), Postives = 567/775 (73.16%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRIS----FALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI++PED+ I P+ D L D +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ D VAD + D D++ I TL PLP +EV H T FVNELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAVSGAM-----DESPP-CYILQVDELRILLDCGWDENFDHEFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGIELEEYQRKEKLKQEQLKQEQMYTADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDY---KIAETMPEVDDNKENLETKQEDTAHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQKDTEILAQQAQGAGAR-------------VFVPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMITARDQVCRDAVADTESNDPIDQS--------DKILTLEPLPLNEVPGHQTTFVNELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|571527115|ref|XP_006561139.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Apis mellifera] >gi|571527119|ref|XP_006561140.1| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Apis mellifera]) HSP 1 Score: 899.812 bits (2324), Expect = 0.000e+0 Identity = 450/772 (58.29%), Postives = 572/772 (74.09%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRISFALDEVA-DIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI++PED+ I P+ D L D +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ A D++ D + ++A++++ K I TL PLP +EV H T F+NELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAVSGAM-----DESPP-CYILQVDELRILLDCGWDENFDQEFIRELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDY---KIAETMPEVDDNKENLETKQEDTAHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQRDTEILAQQAQSAGAR-------------VFIPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMIT-ARDQICRDAVAGTESNDAIDQSDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|1035605179|ref|XP_016910092.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Apis cerana] >gi|1035605181|ref|XP_016910093.1| PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 [Apis cerana] >gi|1241835439|gb|PBC31715.1| cleavage and polyadenylation specificity factor subunit [Apis cerana cerana]) HSP 1 Score: 899.427 bits (2323), Expect = 0.000e+0 Identity = 450/772 (58.29%), Postives = 572/772 (74.09%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRISFALDEVA-DIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI++PED+ I P+ D L D +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ A D++ D + ++A++++ K I TL PLP +EV H T F+NELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAVSGAM-----DESPP-CYILQVDELRILLDCGWDENFDQEFIRELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDY---KIAETMPEIDDNKENLETKQEDTAHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQRDTEILAQQAQSAGAR-------------VFIPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMIT-ARDQICRDAVAGTESNDAIDQSDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|572271377|ref|XP_006613635.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2-like [Apis dorsata]) HSP 1 Score: 899.427 bits (2323), Expect = 0.000e+0 Identity = 449/772 (58.16%), Postives = 572/772 (74.09%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRISFALDEVA-DIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI++PED+ I P+ D L D +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ A D++ D + +++++++ K I TL PLP +EV H T F+NELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAVSGAM-----DESPP-CYILQVDELRILLDCGWDENFDQEFIRELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADISSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDY---KIAETMPEVDDNKENLETKQEDTAHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQRDTEILAQQAQSAGAR-------------VFIPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMIT-ARDQICRDAVAGTESNDSIDQSDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|350400562|ref|XP_003485880.1| (probable cleavage and polyadenylation specificity factor subunit 2 [Bombus impatiens]) HSP 1 Score: 899.427 bits (2323), Expect = 0.000e+0 Identity = 449/772 (58.16%), Postives = 571/772 (73.96%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRISFALDEVA-DIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPF++EKIK D+YGEI++PED+ I P+ D L D +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ A D++ D + D+ ++++ K I TL PLP +EV H T F+NELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAISGAM-----DESPP-CYILQVDELRILLDCGWDENFDQEFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFLEEKIKIDEYGEIIRPEDY---KIAETMPEVDDNKENLETRQEDTTHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQKDTEILAQQAQSAGAR-------------VFIPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMIT-ARDQICRDAVAGTESDDVIDQSDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|340713940|ref|XP_003395491.1| (probable cleavage and polyadenylation specificity factor subunit 2 [Bombus terrestris] >gi|808120684|ref|XP_012163773.1| probable cleavage and polyadenylation specificity factor subunit 2 [Bombus terrestris]) HSP 1 Score: 899.427 bits (2323), Expect = 0.000e+0 Identity = 449/772 (58.16%), Postives = 571/772 (73.96%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRISFALDEVA-DIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPF++EKIK D+YGEI++PED+ I P+ D L D +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ A D++ D + D+ ++++ K I TL PLP +EV H T F+NELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAISGAM-----DESPP-CYILQVDELRILLDCGWDENFDQEFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGLELEEYQRKEKLKQEQLKQEQMETADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFLEEKIKIDEYGEIIRPEDY---KIAETMPEVDDNKENLETKQEDTTHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQKDTEILAQQAQSAGAR-------------VFIPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMIT-ARDQICRDAVAGTESDDVIDQSDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|951559022|ref|XP_014478690.1| (PREDICTED: probable cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Dinoponera quadriceps]) HSP 1 Score: 899.042 bits (2322), Expect = 0.000e+0 Identity = 447/772 (57.90%), Postives = 569/772 (73.70%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW-VDGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRIS----FALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + + E+K +N+IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WC PQN+II+TSRT GTLA DL+ G NR + LE+K+R+KL G ELEE+++KE+ + KQ +M + D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI+KPED+ + T+ + + + + ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AW+D I+ D VAD + D M+E+ K I TL PLP +EV H T F+NELKLSDFK VL KS ISSEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLY+QYAIV Sbjct: 1 MTSIIKLHAISGAM-----DESPP-CYILQVDELRILLDCGWDENFDQDFIKELKRHVNQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCTNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRVKLEGIELEEYQKKEKLKQEQLKQEQMEIADVSSESEDEIEVGGVRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIKPEDYKIAETLPEIEDNKENVEMKQEETSHHPEIAADIPTKCIQVSRTMTVNAAVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSFKDTEILAQQAQSAGAR-------------VFVPARGETLDATTETHIYQVRLTDALVTGLNFSKGKGDSEVAWIDAMITARDQVCRDAVADTE---SDDAIMDESDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQVLNKSNISSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYQQYAIV 738
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|915663318|gb|KOC65642.1| (putative cleavage and polyadenylation specificity factor subunit 2 [Habropoda laboriosa]) HSP 1 Score: 899.042 bits (2322), Expect = 0.000e+0 Identity = 452/775 (58.32%), Postives = 567/775 (73.16%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDES-SDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDWVDGTIDHEQPKAD---PYLRGHPNDADEGKDI-VEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRIS----FALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + E+K +++IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+N+VPSPKVVLAS D+ECGFSR+LFL WCG PQN+II+TSRT GTLA DL+ G NR + LE+K+RIKL G ELEE++RKE+ + KQ +M D S S++E+E GG +G KHD+++K + PG FFK K +H MFPFV+EKIK D+YGEI++PED+ I P+ D L D +I ++PTKC+ + + + A V +IDFEGRSDGES+ K+L Q++PRR++LVRG + LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AWVD I+ D VAD + D D++ I TL PLP +EV H T FVNELKLSDFK +L KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLHAVSGAM-----DESPP-CYILQVDELRILLDCGWDENFDHEFIKELKRHVHQIDAVLLSYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCGNPQNSIILTSRTSPGTLARDLVEKGGNRNITLEVKRRIKLEGIELEEYQRKEKLKQEQLKQEQMETADVSSESEDEIEVGGGRG--KHDLLVKQESKPG------FFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDY---KIAETMPEVDDNKENLETKQEDTAHHPEIPTDIPTKCIQVTRTMTVNASVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSQKDTEILAQQAQGAGAR-------------VFVPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDSEVAWVDAMITARDQVCRDAVADTESNDPIDQS--------DKILTLEPLPLNEVPGHQTTFVNELKLSDFKQILNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 737
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Match: gi|607366741|gb|EZA60898.1| (putative cleavage and polyadenylation specificity factor subunit [Ooceraea biroi]) HSP 1 Score: 899.042 bits (2322), Expect = 0.000e+0 Identity = 448/774 (57.88%), Postives = 567/774 (73.26%), Query Frame = 0 Query: 18 MTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQFTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVSTLGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMITQLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFNHKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTLRNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVIEFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVLASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVLNLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGGTKGPIKHDIIMKVNA-PGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEIVKPEDW--------VDGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIPLKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQLWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLFSKGK-DGLLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLPLPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALRRHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV 781 MTSIIK +SG + D PP CY+L+VD+ L DCGWD FD + M E+K +N+IDAVLLSYPD HLG LPY+V GL+CPIYAT+P+YKMGQMFMYD+YQ+R+NMEDF LFTLD+VD F+ I QLKYNQ+I +KGKG G+ +TP+PAGHMIGG+IWKIVK GEEDI+YAVDFNHKKE+HLNG ++E++QRPSL ITD FNA+Y+Q RRR RDEKLMTNILQTLR GNVLV VDTAGRVLELAHM+D LW+ ++SGL+AYSLALLNN+S+NV+EFAKSQIEWMSDKLMR+FEG RNNPFQFKHL+LCHSMAE+++VPSPKVVLAS D+ECGFSR+LFL WC PQN+II+TSRT GTLA DL+ G NR + LE+K+R++L GAELEEH+++E K KQ +M E S++E+E GG +G KHD+++K PG FFK K +H +FPFV+EKIK D+YGEI+KPED+ VD ++ + K + + HP A ++PTKCV + + + A+V +IDFEGRSDGES+ K+L Q++PRR++LVRG LA + A+ V+ P GET+DATTE+ IYQV+L ++LV L FSKGK D +AW+D I+ D + + A+ E+ K I TL PLP +EV H T F+NELKLSDFK VL KS I SEF+GGVL+C N +A+RRH++G+V +EG + +DYY+VR+LLYEQYAIV Sbjct: 1 MTSIIKLLAISGAM-----DESPP-CYILQVDELRILLDCGWDENFDHDFMRELKRHVNQIDAVLLSYPDPLHLGALPYLVGRCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVDAAFDRIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKKERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTAGRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARNNPFQFKHLQLCHSMAELSQVPSPKVVLASTPDMECGFSRELFLQWCTNPQNSIILTSRTSPGTLARDLVERGGNRNITLEVKRRVRLEGAELEEHQKRE-----KLKQEQMKQEQISESEDEIEVGGARG--KHDLLVKQETKPG------FFKQSKKQHPIFPFVEEKIKIDEYGEIIKPEDYKIAETAPEVDENKENTETKHEE-INHHPEIA------ADIPTKCVQVSRTMTVNAEVTYIDFEGRSDGESLQKILAQLRPRRVVLVRGSPKDSEILAQQAQSAGAR-------------VFIPGRGETLDATTETHIYQVRLTDALVSGLNFSKGKGDAEVAWIDAMITARNHVCRDAIADKESENAIAESDK----ILTLEPLPLNEVPGHQTTFINELKLSDFKQVLNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCISEDYYKVRELLYEQYAIV 731 The following BLAST results are available for this feature:
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of cleavage and polyadenylation specificity factor subunit 2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold281_size224178:128942..131997- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold281_size224178-snap-gene-1.30 ID=maker-scaffold281_size224178-snap-gene-1.30|Name=cleavage and polyadenylation specificity factor subunit 2|organism=Tigriopus kingsejongensis|type=gene|length=3056bp|location=Sequence derived from alignment at scaffold281_size224178:128942..131997- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cleavage and polyadenylation specificity factor subunit 2' has the following synonyms
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