AGAP004611-PA, maker-scaffold287_size221780-snap-gene-0.21 (gene) Tigriopus kingsejongensis

Overview
NameAGAP004611-PA
Unique Namemaker-scaffold287_size221780-snap-gene-0.21
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000004188 (supercontig:LSalAtl2s:LSalAtl2s221:321106:325044:-1 gene:EMLSAG00000004188 transcript:EMLSAT00000004188 description:"maker-LSalAtl2s221-augustus-gene-3.12")

HSP 1 Score: 132.494 bits (332), Expect = 5.153e-38
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 0 
Query:    1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPMSKLYGPF 87
            MT+L++P+AGGATV+PY G   +PEKG+ + W NL+ DG PD LT HAACPVL GQKWIGNKWIGYTPQ   + C+LK  +KL GP 
Sbjct:  619 MTILQSPSAGGATVFPYTGAYSYPEKGTGIGWXNLKDDGYPDELTRHAACPVLFGQKWIGNKWIGYTPQIYKKPCSLKMGTKLSGPL 705
[Close]
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000012413 (supercontig:LSalAtl2s:LSalAtl2s909:41472:46417:1 gene:EMLSAG00000012413 transcript:EMLSAT00000012413 description:"augustus_masked-LSalAtl2s909-processed-gene-0.4")

HSP 1 Score: 90.5077 bits (223), Expect = 3.567e-23
Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 0 
Query:    1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACAL---KPMSKLYGP 86
            M  L    AGG T +P +G  + PEKG+AVFW+N+  +G  DY   H  CPVL G KWI NKWI     W+  +C +   KP+ +   P
Sbjct:  447 MAYLSDVGAGGGTTFPSLGXKVTPEKGAAVFWYNIDKNGMQDYNMFHGGCPVLTGSKWITNKWIRQLSNWEKHSCTMSYGKPLKRFEVP 535
[Close]
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000012326 (supercontig:LSalAtl2s:LSalAtl2s8:1477583:1479313:1 gene:EMLSAG00000012326 transcript:EMLSAT00000012326 description:"augustus_masked-LSalAtl2s8-processed-gene-15.1")

HSP 1 Score: 85.8853 bits (211), Expect = 1.343e-21
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0 
Query:    1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALK 78
            M  +    +GG TV+P +G+ + P  G+AVFW+NL+  G+ D  TLH ACPVLLG KW+ NKWI    Q   R C L+
Sbjct:  396 MVYMNNVISGGRTVFPRLGLGVEPIPGAAVFWYNLKKSGEADDRTLHGACPVLLGSKWVSNKWIREGGQMFTRPCGLE 473
[Close]
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000004404 (supercontig:LSalAtl2s:LSalAtl2s231:1078605:1080545:-1 gene:EMLSAG00000004404 transcript:EMLSAT00000004404 description:"snap_masked-LSalAtl2s231-processed-gene-10.3")

HSP 1 Score: 80.8777 bits (198), Expect = 9.051e-20
Identity = 39/83 (46.99%), Postives = 46/83 (55.42%), Query Frame = 0 
Query:    1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPMSKL 83
            M  L     GGATV+P + +    ++G AVFW NL SDG  D  TLH  CPVL+G KWI NKWI    Q     C LK  S +
Sbjct:  507 MVYLRDVPMGGATVFPKINIYSNAQRGDAVFWINLLSDGTLDTRTLHGGCPVLVGSKWITNKWIASNVQMHLYPCPLKLSSNM 589
[Close]
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000010988 (supercontig:LSalAtl2s:LSalAtl2s73:416831:418075:1 gene:EMLSAG00000010988 transcript:EMLSAT00000010988 description:"maker-LSalAtl2s73-augustus-gene-4.34")

HSP 1 Score: 75.0998 bits (183), Expect = 9.615e-20
Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 0 
Query:    6 APAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPMSK 82
            +   GG T +  +   ++P+KGS+VFWFNL SDG+ D LT+H ACP + G KW+ NKWI    Q   +  +    SK
Sbjct:    5 SDVDGGGTAFTKINKLVYPKKGSSVFWFNLYSDGKEDTLTIHGACPTMYGIKWVSNKWIRSFAQIFXKTLSHNQASK 81
[Close]
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 77.411 bits (189), Expect = 1.335e-18
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:    1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWI 64
            M  L     GG T +P +GV+  P KGSAVFW N++  G+ D   +H ACPV++G KW+ NKWI
Sbjct:  460 MIYLSDVQKGGNTAFPRLGVATSPRKGSAVFWHNIKRSGRSDMHMIHGACPVVMGSKWVANKWI 523
[Close]
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000009563 (supercontig:LSalAtl2s:LSalAtl2s615:626046:628492:-1 gene:EMLSAG00000009563 transcript:EMLSAT00000009563 description:"maker-LSalAtl2s615-augustus-gene-5.47")

HSP 1 Score: 76.6406 bits (187), Expect = 2.227e-18
Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 0 
Query:   10 GGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79
            GGATV+P + ++++P+KGSAVFWFNL  +G+ +  T HAA PVL G K + N WI    Q   R CAL P
Sbjct:  465 GGATVFPVLDLTLWPQKGSAVFWFNLYRNGEGNEDTRHAAXPVLKGTKXVSNFWIHERGQEFTRPCALTP 534
[Close]
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000004330 (supercontig:LSalAtl2s:LSalAtl2s227:607006:610705:1 gene:EMLSAG00000004330 transcript:EMLSAT00000004330 description:"maker-LSalAtl2s227-augustus-gene-6.6")

HSP 1 Score: 69.707 bits (169), Expect = 6.768e-16
Identity = 33/79 (41.77%), Postives = 44/79 (55.70%), Query Frame = 0 
Query:    1 MTVLEAPAAGGATVWPYVGVS--IFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACAL 77
            M  L+   AGG+T + Y G    + P KGSA  WFNL  +G+  + T H  CP++ G KWI NKW+ Y  Q+    C L
Sbjct:  423 MGWLDDVEAGGSTAFIYPGREGILKPRKGSAAIWFNLHKNGKKSFSTSHGGCPIIGGTKWILNKWMFYFDQFHGYPCGL 501
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|129365|sp|P16924.1|P4HA1_CHICK (RecName: Full=Prolyl 4-hydroxylase subunit alpha-1; Short=4-PH alpha-1; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.711e-23
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:    8 AAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPM 80
            +AGGATV+P VG S++P+KG+AVFW+NL   G+ DY T HAACPVL+G KW+ NKW+    Q   R C L  +
Sbjct:  443 SAGGATVFPEVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPCTLSEL 515
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|2507090|sp|P13674.2|P4HA1_HUMAN (RecName: Full=Prolyl 4-hydroxylase subunit alpha-1; Short=4-PH alpha-1; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1; Flags: Precursor >gi|75061858|sp|Q5RAG8.1|P4HA1_PONAB RecName: Full=Prolyl 4-hydroxylase subunit alpha-1; Short=4-PH alpha-1; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1; Flags: Precursor)

HSP 1 Score: 94.3597 bits (233), Expect = 3.956e-23
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0 
Query:    8 AAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPM 80
            +AGGATV+P VG S++P+KG+AVFW+NL + G+ DY T HAACPVL+G KW+ NKW+    Q   R C L  +
Sbjct:  461 SAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPCTLSEL 533
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|20455506|sp|Q60715.2|P4HA1_MOUSE (RecName: Full=Prolyl 4-hydroxylase subunit alpha-1; Short=4-PH alpha-1; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1; Flags: Precursor)

HSP 1 Score: 94.3597 bits (233), Expect = 4.539e-23
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0 
Query:    8 AAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPM 80
            +AGGATV+P VG S++P+KG+AVFW+NL + G+ DY T HAACPVL+G KW+ NKW+    Q   R C L  +
Sbjct:  461 SAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPCTLSEL 533
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|122144801|sp|Q1RMU3.1|P4HA1_BOVIN (RecName: Full=Prolyl 4-hydroxylase subunit alpha-1; Short=4-PH alpha-1; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1; Flags: Precursor)

HSP 1 Score: 93.9745 bits (232), Expect = 5.365e-23
Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 0 
Query:    9 AGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPM 80
            AGGATV+P VG S++P+KG+AVFW+NL + G+ DY T HAACPVL+G KW+ NKW+    Q   R C L  +
Sbjct:  462 AGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPCTLSEL 533
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|90111077|sp|P54001.2|P4HA1_RAT (RecName: Full=Prolyl 4-hydroxylase subunit alpha-1; Short=4-PH alpha-1; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-1; Flags: Precursor)

HSP 1 Score: 93.9745 bits (232), Expect = 5.472e-23
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0 
Query:    8 AAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPM 80
            +AGGATV+P VG S++P+KG+AVFW+NL + G+ DY T HAACPVL+G KW+ NKW+    Q   R C L  +
Sbjct:  461 SAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLHERGQEFRRPCTLSEL 533
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|32171589|sp|Q20065.1|P4HA2_CAEEL (RecName: Full=Prolyl 4-hydroxylase subunit alpha-2; Short=4-PH alpha-2; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-2; Flags: Precursor)

HSP 1 Score: 92.8189 bits (229), Expect = 1.486e-22
Identity = 39/75 (52.00%), Postives = 50/75 (66.67%), Query Frame = 0 
Query:    4 LEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALK 78
            +  P  GGATV+ ++G ++FP K  A+FW+NLR DG+ D  T HAACPVLLG KW+ NKWI    Q   R C L+
Sbjct:  447 MSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIHEKGQEFTRPCGLE 521
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|20455169|sp|O15460.1|P4HA2_HUMAN (RecName: Full=Prolyl 4-hydroxylase subunit alpha-2; Short=4-PH alpha-2; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-2; Flags: Precursor)

HSP 1 Score: 86.2705 bits (212), Expect = 2.930e-20
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:    9 AGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACA 76
            AGGATV+P +G +I+P+KG+AVFW+NL   G+ DY T HAACPVL+G KW+ NKW     Q   R C 
Sbjct:  463 AGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPCG 530
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|2498741|sp|Q60716.1|P4HA2_MOUSE (RecName: Full=Prolyl 4-hydroxylase subunit alpha-2; Short=4-PH alpha-2; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-2; Flags: Precursor)

HSP 1 Score: 85.8853 bits (211), Expect = 3.673e-20
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:    9 AGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACA 76
            AGGATV+P +G +I+P+KG+AVFW+NL   G+ DY T HAACPVL+G KW+ NKW     Q   R C 
Sbjct:  465 AGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPCG 532
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|82082587|sp|Q5ZLK5.1|P4HA2_CHICK (RecName: Full=Prolyl 4-hydroxylase subunit alpha-2; Short=4-PH alpha-2; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-2; Flags: Precursor)

HSP 1 Score: 84.7297 bits (208), Expect = 1.173e-19
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0 
Query:    9 AGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKW 63
            AGGATV+P  G +I+P+KG+AVFW+NL   G+ DY T HAACPVL+G KW+ NKW
Sbjct:  462 AGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGCKWVSNKW 516
[Close]
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|75053350|sp|Q75UG4.1|P4HA3_BOVIN (RecName: Full=Prolyl 4-hydroxylase subunit alpha-3; Short=4-PH alpha-3; AltName: Full=Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-3; Flags: Precursor)

HSP 1 Score: 75.485 bits (184), Expect = 1.652e-16
Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:    1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79
            M  L +  AGGAT + Y   S+   K +A+FW+NL   G+ D  TLHAACPVL+G KW+ NKWI    Q   R C+ +P
Sbjct:  464 MIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAACPVLVGDKWVANKWIHEYGQEFRRPCSSRP 542
[Close]
BLAST of AGAP004611-PA vs. nr
Match: gi|1004667034|ref|XP_015742995.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1 isoform X3 [Python bivittatus])

HSP 1 Score: 97.4413 bits (241), Expect = 9.808e-22
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0 
Query:    8 AAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACAL 77
            AAGGATV+P VG S++P+KG+AVFW+NL   G+ DY T HAACPVL+G KW+ NKWI    Q   R CAL
Sbjct:  468 AAGGATVFPEVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPCAL 537
[Close]
BLAST of AGAP004611-PA vs. nr
Match: gi|602636139|ref|XP_007424927.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1 isoform X1 [Python bivittatus])

HSP 1 Score: 97.4413 bits (241), Expect = 9.808e-22
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0 
Query:    8 AAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACAL 77
            AAGGATV+P VG S++P+KG+AVFW+NL   G+ DY T HAACPVL+G KW+ NKWI    Q   R CAL
Sbjct:  468 AAGGATVFPEVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPCAL 537
[Close]
BLAST of AGAP004611-PA vs. nr
Match: gi|321463241|gb|EFX74258.1| (hypothetical protein DAPPUDRAFT_22132, partial [Daphnia pulex])

HSP 1 Score: 97.4413 bits (241), Expect = 1.094e-21
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:   10 GGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACAL 77
            GG+T +P  GV++ P KG A FWFNL+  G+PD LTLH ACPVLLG KW+ NKWI  T Q  NR C L
Sbjct:  455 GGSTAFPRAGVAVKPVKGGAAFWFNLKRSGKPDPLTLHGACPVLLGHKWVSNKWIRETAQTFNRRCLL 522
[Close]
BLAST of AGAP004611-PA vs. nr
Match: gi|1042376453|ref|XP_017332645.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like isoform X2 [Ictalurus punctatus])

HSP 1 Score: 97.4413 bits (241), Expect = 1.099e-21
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0 
Query:    8 AAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACAL 77
            AAGGATV+P VG +++P+KG+AVFW+NL S G+ DY T HAACPVL+G KW+ NKWI    Q   R C+L
Sbjct:  461 AAGGATVFPDVGAAVWPKKGTAVFWYNLFSSGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPCSL 530
[Close]
BLAST of AGAP004611-PA vs. nr
Match: gi|1037010164|ref|XP_017100848.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1 isoform X3 [Drosophila bipectinata])

HSP 1 Score: 96.6709 bits (239), Expect = 1.152e-21
Identity = 38/69 (55.07%), Postives = 54/69 (78.26%), Query Frame = 0 
Query:   10 GGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALK 78
            GGATV+P +  +++P++GSA+ W+NL+ DG+PD LTLHAACPVL+G KW+ NKWI    Q+++R C  K
Sbjct:  358 GGATVFPTIHKTVYPQRGSAIMWYNLKDDGEPDELTLHAACPVLVGSKWVCNKWIRERAQFRSRPCLKK 426
The following BLAST results are available for this feature:
BLAST of AGAP004611-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 8
Match NameE-valueIdentityDescription
EMLSAG000000041885.153e-3863.22supercontig:LSalAtl2s:LSalAtl2s221:321106:325044:-... [more]
EMLSAG000000124133.567e-2342.70supercontig:LSalAtl2s:LSalAtl2s909:41472:46417:1 g... [more]
EMLSAG000000123261.343e-2147.44supercontig:LSalAtl2s:LSalAtl2s8:1477583:1479313:1... [more]
EMLSAG000000044049.051e-2046.99supercontig:LSalAtl2s:LSalAtl2s231:1078605:1080545... [more]
EMLSAG000000109889.615e-2042.86supercontig:LSalAtl2s:LSalAtl2s73:416831:418075:1 ... [more]
EMLSAG000000117001.335e-1848.44supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 ... [more]
EMLSAG000000095632.227e-1851.43supercontig:LSalAtl2s:LSalAtl2s615:626046:628492:-... [more]
EMLSAG000000043306.768e-1641.77supercontig:LSalAtl2s:LSalAtl2s227:607006:610705:1... [more]
back to top
BLAST of AGAP004611-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
gi|129365|sp|P16924.1|P4HA1_CHICK3.711e-2354.79RecName: Full=Prolyl 4-hydroxylase subunit alpha-1... [more]
gi|2507090|sp|P13674.2|P4HA1_HUMAN3.956e-2354.79RecName: Full=Prolyl 4-hydroxylase subunit alpha-1... [more]
gi|20455506|sp|Q60715.2|P4HA1_MOUSE4.539e-2354.79RecName: Full=Prolyl 4-hydroxylase subunit alpha-1... [more]
gi|122144801|sp|Q1RMU3.1|P4HA1_BOVIN5.365e-2355.56RecName: Full=Prolyl 4-hydroxylase subunit alpha-1... [more]
gi|90111077|sp|P54001.2|P4HA1_RAT5.472e-2354.79RecName: Full=Prolyl 4-hydroxylase subunit alpha-1... [more]
gi|32171589|sp|Q20065.1|P4HA2_CAEEL1.486e-2252.00RecName: Full=Prolyl 4-hydroxylase subunit alpha-2... [more]
gi|20455169|sp|O15460.1|P4HA2_HUMAN2.930e-2055.88RecName: Full=Prolyl 4-hydroxylase subunit alpha-2... [more]
gi|2498741|sp|Q60716.1|P4HA2_MOUSE3.673e-2055.88RecName: Full=Prolyl 4-hydroxylase subunit alpha-2... [more]
gi|82082587|sp|Q5ZLK5.1|P4HA2_CHICK1.173e-1963.64RecName: Full=Prolyl 4-hydroxylase subunit alpha-2... [more]
gi|75053350|sp|Q75UG4.1|P4HA3_BOVIN1.652e-1646.84RecName: Full=Prolyl 4-hydroxylase subunit alpha-3... [more]

Pages

back to top
BLAST of AGAP004611-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1004667034|ref|XP_015742995.1|9.808e-2261.43PREDICTED: prolyl 4-hydroxylase subunit alpha-1 is... [more]
gi|602636139|ref|XP_007424927.1|9.808e-2261.43PREDICTED: prolyl 4-hydroxylase subunit alpha-1 is... [more]
gi|321463241|gb|EFX74258.1|1.094e-2160.29hypothetical protein DAPPUDRAFT_22132, partial [Da... [more]
gi|1042376453|ref|XP_017332645.1|1.099e-2160.00PREDICTED: prolyl 4-hydroxylase subunit alpha-1-li... [more]
gi|1037010164|ref|XP_017100848.1|1.152e-2155.07PREDICTED: prolyl 4-hydroxylase subunit alpha-1 is... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold287_size221780supercontigscaffold287_size221780:31828..33868 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:oxidoreductase activity
Note acting on paired donors
Note with incorporation or reduction of molecular oxygen
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold287_size221780-snap-gene-0.21-mRNA-1maker-scaffold287_size221780-snap-gene-0.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold287_size221780:31828..33868+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold287_size221780-snap-gene-0.21 ID=maker-scaffold287_size221780-snap-gene-0.21|Name=AGAP004611-PA|organism=Tigriopus kingsejongensis|type=gene|length=2041bp|location=Sequence derived from alignment at scaffold287_size221780:31828..33868+ (Tigriopus kingsejongensis)
CCGACAAATACAACAATTTCGCCTGATTTCAGTGCGGAAACTATGGCATC
GGCGGTCACTATGGAACTCATCCCGACTTTAGCAAATGGGACCCTCGAGC
ATTCCAGGAGCCAGCTTCGCGCGTCAACCGCATTTCCACGGTCATGACCG
TTCTCGAAGCCCCAGCCGCAGGTAACGGCTAATTCATAAATGTCTAATTT
GGACGGCGAACTTTCATCCCTCTCTCTCTTCTTTTCCAGGCGGAGCGACA
GTTTGGCCTTATGTGGGCGTGTCCATTTTCCCCGAGAAAGGATCTGCTGT
CTTTTGGTTCAATCTGAGGAGTGATGGACAGCCTGATTACCTCACCCTCC
ATGCCGCATGTCCCGTGCTGCTAGGGCAAAAATGGAGTAAGTCATGGGGC
TAGTGATATTATTGAAGGCTTGTCAACTTGACATTATCATAGGGGGAGAG
CCAGATCAAAGCCCCACCTCGAGATACAACCGCTCACACTAGCAATTACC
ACCATGCCTGCCAATGATGGAATGTCAGGAGCAAAAATAACATCTTTGCC
ATTATCTCCAGTGCGAAGAGTTCAAGTTTAATTTCAACGTAGAAATTTGG
ACGAGATCTCGTCACGAACGCCGATTTGAGAAATCTACATACAAACAATA
CATTGAGACAAATTCCAGGGGTACTATTTTTACCATATGGTTAAACCATT
ATCGAACTTAGCTTGGTGAAAAATTGCCCAAACCGAACCTCGTGCTGAAA
CATGCCTCATAATTCTCACGTTTTAACAAAATTCGACAAAAAAAACTTTT
GTTTTTCTTGACCTTGTCCGGTTTTTCTCTCAAAAATATAAAGTTGGCTT
TGCTTTTGAAGTTGGTCGAGACCAACTATGGAGATTCTTCAGTCATAAAC
CCGCACCTTTTCTCACTCAGTGAGACTGTGTGATCTCTGCTCTAACCAAA
TAACGGGAAACCCCCTCCAGGAAACCCGGTCAACCCACTCAAGGTTCGGC
ACCAAAATACAATAACTTATATTTTCATCGGCAACGAAGGCTCCTCTGGT
TTGTAAATCCCCACATGCCTACTAAAGTACAATGCTCTGAAGGCACTTCA
ACCAGAAATGTCGAACGGCCAGAAAAACAATCAAATGGTGCTCCCACTTT
TCGGGGGACACTGGCCACATCCAGTTTAACGTAGAGAAACATGGACAGTG
TCGATGAGTCATCCACAAAAAAATCCCGGTAAGAATCCGGTTTACTCAGT
TCGAAAGCGCAGGAGCTAAATTCTTCGCACATCGAAAGTTTTTGTGTATT
CAATGTCTCGCATCTTTCAAGGCATTCTTAAATTTAGCCATCAATGTATA
CATCCTGTCATAGGAACACTTCAGTCCCTGGGCATCACTCACCCTCATTG
GCTTTGGTGGGAACAAACTTGATCTCATGAATAATCGTTCCCTTGATCAA
GACTAGCTTCGCGAGGTGATGGAGATTTGGAGAAAAGTTCCTCATTATCA
CTCCTCAGCCGCCCTCAAGACTGGTGTTTTTTCGAGTCCCGCAGCATTTG
ACCACGACTCAACCCCCTATTTCAGATCTGATCAGGCTGTTCGAGCTCCT
ACTTTGGGGGTCTCAGCGCCATGTCAACATTTACCTAGAGCTGATCAAAC
CCCAATTAGGCAGACAATGGGGATTGGCTCGAGAAAACATGTTCATGAAA
AGCACAGCCCATACAGGTTCCTTTCACATAATAGTAATGTACGTACAGTG
TACGTCCATTACATATGCCATTAAAATCGCCGTGGTAGCTGCTACAGAAG
CTACTTCAGCGTATATTGCAGTCTGTTAGACGCCAATCCTACGAGTAATA
CTGGATTCCCATTTTCAGTCGGCAACAAGTGGATCGGCTACACTCCGCAG
TGGAAGAATCGAGCGTGCGCCTTGAAGCCCATGTCCAAGCTCTATGGCCC
ATTCCGTTGATCTGTGCATAATTTTCAGTCTTCTTTTTCCTTGTTATTGA
CCAATGTCTGTGATAAACGTGTACTACCGAGCAAAATATGT
back to top
Synonyms
The feature 'AGAP004611-PA' has the following synonyms
Synonym
Tk01887
Add to Basket