AGAP004611-PA, maker-scaffold287_size221780-snap-gene-0.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000004188 (supercontig:LSalAtl2s:LSalAtl2s221:321106:325044:-1 gene:EMLSAG00000004188 transcript:EMLSAT00000004188 description:"maker-LSalAtl2s221-augustus-gene-3.12") HSP 1 Score: 132.494 bits (332), Expect = 5.153e-38 Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPMSKLYGPF 87 MT+L++P+AGGATV+PY G +PEKG+ + W NL+ DG PD LT HAACPVL GQKWIGNKWIGYTPQ + C+LK +KL GP Sbjct: 619 MTILQSPSAGGATVFPYTGAYSYPEKGTGIGWXNLKDDGYPDELTRHAACPVLFGQKWIGNKWIGYTPQIYKKPCSLKMGTKLSGPL 705
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000012413 (supercontig:LSalAtl2s:LSalAtl2s909:41472:46417:1 gene:EMLSAG00000012413 transcript:EMLSAT00000012413 description:"augustus_masked-LSalAtl2s909-processed-gene-0.4") HSP 1 Score: 90.5077 bits (223), Expect = 3.567e-23 Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACAL---KPMSKLYGP 86 M L AGG T +P +G + PEKG+AVFW+N+ +G DY H CPVL G KWI NKWI W+ +C + KP+ + P Sbjct: 447 MAYLSDVGAGGGTTFPSLGXKVTPEKGAAVFWYNIDKNGMQDYNMFHGGCPVLTGSKWITNKWIRQLSNWEKHSCTMSYGKPLKRFEVP 535
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000012326 (supercontig:LSalAtl2s:LSalAtl2s8:1477583:1479313:1 gene:EMLSAG00000012326 transcript:EMLSAT00000012326 description:"augustus_masked-LSalAtl2s8-processed-gene-15.1") HSP 1 Score: 85.8853 bits (211), Expect = 1.343e-21 Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALK 78 M + +GG TV+P +G+ + P G+AVFW+NL+ G+ D TLH ACPVLLG KW+ NKWI Q R C L+ Sbjct: 396 MVYMNNVISGGRTVFPRLGLGVEPIPGAAVFWYNLKKSGEADDRTLHGACPVLLGSKWVSNKWIREGGQMFTRPCGLE 473
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000004404 (supercontig:LSalAtl2s:LSalAtl2s231:1078605:1080545:-1 gene:EMLSAG00000004404 transcript:EMLSAT00000004404 description:"snap_masked-LSalAtl2s231-processed-gene-10.3") HSP 1 Score: 80.8777 bits (198), Expect = 9.051e-20 Identity = 39/83 (46.99%), Postives = 46/83 (55.42%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPMSKL 83 M L GGATV+P + + ++G AVFW NL SDG D TLH CPVL+G KWI NKWI Q C LK S + Sbjct: 507 MVYLRDVPMGGATVFPKINIYSNAQRGDAVFWINLLSDGTLDTRTLHGGCPVLVGSKWITNKWIASNVQMHLYPCPLKLSSNM 589
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000010988 (supercontig:LSalAtl2s:LSalAtl2s73:416831:418075:1 gene:EMLSAG00000010988 transcript:EMLSAT00000010988 description:"maker-LSalAtl2s73-augustus-gene-4.34") HSP 1 Score: 75.0998 bits (183), Expect = 9.615e-20 Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 6 APAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPMSK 82 + GG T + + ++P+KGS+VFWFNL SDG+ D LT+H ACP + G KW+ NKWI Q + + SK Sbjct: 5 SDVDGGGTAFTKINKLVYPKKGSSVFWFNLYSDGKEDTLTIHGACPTMYGIKWVSNKWIRSFAQIFXKTLSHNQASK 81
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 77.411 bits (189), Expect = 1.335e-18 Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWI 64 M L GG T +P +GV+ P KGSAVFW N++ G+ D +H ACPV++G KW+ NKWI Sbjct: 460 MIYLSDVQKGGNTAFPRLGVATSPRKGSAVFWHNIKRSGRSDMHMIHGACPVVMGSKWVANKWI 523
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000009563 (supercontig:LSalAtl2s:LSalAtl2s615:626046:628492:-1 gene:EMLSAG00000009563 transcript:EMLSAT00000009563 description:"maker-LSalAtl2s615-augustus-gene-5.47") HSP 1 Score: 76.6406 bits (187), Expect = 2.227e-18 Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 0 Query: 10 GGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79 GGATV+P + ++++P+KGSAVFWFNL +G+ + T HAA PVL G K + N WI Q R CAL P Sbjct: 465 GGATVFPVLDLTLWPQKGSAVFWFNLYRNGEGNEDTRHAAXPVLKGTKXVSNFWIHERGQEFTRPCALTP 534
BLAST of AGAP004611-PA vs. L. salmonis genes
Match: EMLSAG00000004330 (supercontig:LSalAtl2s:LSalAtl2s227:607006:610705:1 gene:EMLSAG00000004330 transcript:EMLSAT00000004330 description:"maker-LSalAtl2s227-augustus-gene-6.6") HSP 1 Score: 69.707 bits (169), Expect = 6.768e-16 Identity = 33/79 (41.77%), Postives = 44/79 (55.70%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVS--IFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACAL 77 M L+ AGG+T + Y G + P KGSA WFNL +G+ + T H CP++ G KWI NKW+ Y Q+ C L Sbjct: 423 MGWLDDVEAGGSTAFIYPGREGILKPRKGSAAIWFNLHKNGKKSFSTSHGGCPIIGGTKWILNKWMFYFDQFHGYPCGL 501
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|75248531|sp|Q8VZJ7.1|P4H9_ARATH (RecName: Full=Probable prolyl 4-hydroxylase 9; Short=AtP4H9) HSP 1 Score: 50.447 bits (119), Expect = 9.401e-8 Identity = 21/70 (30.00%), Postives = 37/70 (52.86%), Query Frame = 0 Query: 10 GGATVWPY---------------VGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWI 64 GG T++P+ +G+ + P KG + ++++ +G D +LH +CPV G+KW+ KWI Sbjct: 212 GGETMFPFENGSNMGIGYDYKQCIGLKVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVATKWI 281
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|75245815|sp|Q8L970.1|P4H7_ARATH (RecName: Full=Probable prolyl 4-hydroxylase 7; Short=AtP4H7) HSP 1 Score: 50.447 bits (119), Expect = 1.136e-7 Identity = 19/46 (41.30%), Postives = 29/46 (63.04%), Query Frame = 0 Query: 19 GVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWI 64 G ++ P KG A+ +FNL + D +LH +CPV+ G+KW +WI Sbjct: 214 GYAVKPRKGDALLFFNLHPNATTDSNSLHGSCPVVEGEKWSATRWI 259
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|75268095|sp|Q9ZW86.1|P4H1_ARATH (RecName: Full=Prolyl 4-hydroxylase 1; Short=AtP4H-1; Short=AtP4H1) HSP 1 Score: 50.0618 bits (118), Expect = 1.452e-7 Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 0 Query: 19 GVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWI 64 G+S+ P KG AV ++++ DGQ D ++H C VL G+KW KW+ Sbjct: 232 GISVKPTKGDAVLFWSMGLDGQSDPRSIHGGCEVLSGEKWSATKWM 277
BLAST of AGAP004611-PA vs. SwissProt
Match: gi|122195556|sp|Q24JN5.1|P4H5_ARATH (RecName: Full=Prolyl 4-hydroxylase 5; Short=AtP4H5) HSP 1 Score: 49.2914 bits (116), Expect = 2.414e-7 Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 0 Query: 19 GVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKW 63 G+S+ P+K A+ ++N+R D D +LH CPV+ G KW KW Sbjct: 239 GLSVLPKKRDALLFWNMRPDASLDPSSLHGGCPVVKGNKWSSTKW 283
BLAST of AGAP004611-PA vs. nr
Match: gi|1325297246|ref|XP_023331149.1| (prolyl 4-hydroxylase subunit alpha-2-like [Eurytemora affinis]) HSP 1 Score: 98.2117 bits (243), Expect = 3.213e-24 Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPMSK 82 MTV+ +P GG TVWP++GVS+ +KG + W NL ++G P LT HAACPVLLG KWI NKW+ Y QW C ++K Sbjct: 68 MTVVSSPVQGGTTVWPFLGVSVILQKGDTLIWKNLSNEGDPLVLTHHAACPVLLGDKWIVNKWLSYNEQWNRNKCMRTAVNK 149
BLAST of AGAP004611-PA vs. nr
Match: gi|1205908850|gb|OWF55035.1| (Prolyl 4-hydroxylase subunit alpha-1 [Mizuhopecten yessoensis]) HSP 1 Score: 100.908 bits (250), Expect = 1.583e-23 Identity = 44/79 (55.70%), Postives = 52/79 (65.82%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79 +T + AGGATV+PY+GV IFPEKG A FW+NL G+ Y T HAACPVL+G KW+ NKWI Q R C L P Sbjct: 264 LTYMSDVKAGGATVFPYIGVKIFPEKGGAAFWYNLYKSGEGIYDTRHAACPVLVGTKWVSNKWIHEKGQEFRRRCGLNP 342
BLAST of AGAP004611-PA vs. nr
Match: gi|1207911045|ref|XP_021376327.1| (prolyl 4-hydroxylase subunit alpha-1-like, partial [Mizuhopecten yessoensis]) HSP 1 Score: 100.523 bits (249), Expect = 1.736e-23 Identity = 44/79 (55.70%), Postives = 52/79 (65.82%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79 +T + AGGATV+PY+GV IFPEKG A FW+NL G+ Y T HAACPVL+G KW+ NKWI Q R C L P Sbjct: 257 LTYMSDVKAGGATVFPYIGVKIFPEKGGAAFWYNLYKSGEGIYDTRHAACPVLVGTKWVSNKWIHEKGQEFRRRCGLNP 335
BLAST of AGAP004611-PA vs. nr
Match: gi|1228404351|ref|XP_021961276.1| (prolyl 4-hydroxylase subunit alpha-2-like [Folsomia candida] >gi|1215259448|gb|OXA45773.1| Prolyl 4-hydroxylase subunit alpha-2 [Folsomia candida]) HSP 1 Score: 100.908 bits (250), Expect = 6.428e-23 Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPMSKLYGPFR 88 M LE AGG+TV+PY+GV + P+KG+AVFW+NL+ DG D LT HA C VL G KWI NKW+ Y Q++ C +P FR Sbjct: 459 MVYLENVGAGGSTVFPYIGVQVKPKKGTAVFWWNLKRDGSGDPLTRHAGCSVLYGSKWITNKWVRYNAQFQRALCIPEPEDNRSASFR 546
BLAST of AGAP004611-PA vs. nr
Match: gi|1121085851|ref|XP_019555923.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Aedes albopictus]) HSP 1 Score: 100.523 bits (249), Expect = 7.592e-23 Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79 M L GGATV+P +GV +FP+KGSA+FW+NL DG+ D TLH ACPVLLG KW+ NKWI Q R C L+P Sbjct: 436 MYYLSDVEQGGATVFPQIGVGVFPKKGSAIFWYNLLPDGRGDERTLHGACPVLLGSKWVANKWIHQYHQEFRRPCDLQP 514
BLAST of AGAP004611-PA vs. nr
Match: gi|1000212429|gb|KXJ82020.1| (hypothetical protein RP20_CCG015909 [Aedes albopictus]) HSP 1 Score: 100.523 bits (249), Expect = 7.668e-23 Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79 M L GGATV+P +GV +FP+KGSA+FW+NL DG+ D TLH ACPVLLG KW+ NKWI Q R C L+P Sbjct: 436 MYYLSDVEQGGATVFPQIGVGVFPKKGSAIFWYNLLPDGRGDERTLHGACPVLLGSKWVANKWIHQYHQEFRRPCDLQP 514
BLAST of AGAP004611-PA vs. nr
Match: gi|1121128559|ref|XP_019552005.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Aedes albopictus]) HSP 1 Score: 100.523 bits (249), Expect = 7.744e-23 Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79 M L GGATV+P +GV +FP+KGSA+FW+NL DG+ D TLH ACPVLLG KW+ NKWI Q R C L+P Sbjct: 436 MYYLSDVEQGGATVFPQIGVGVFPKKGSAIFWYNLLPDGRGDERTLHGACPVLLGSKWVANKWIHQYHQEFRRPCDLQP 514
BLAST of AGAP004611-PA vs. nr
Match: gi|957840244|ref|XP_014670419.1| (PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Priapulus caudatus]) HSP 1 Score: 99.7525 bits (247), Expect = 1.259e-22 Identity = 47/80 (58.75%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKPM 80 MT LEA GGATV+P VG I PE+GSA FW+NL+ GQ DY T HAACPVL G KW+ NKWI Q R C L M Sbjct: 390 MTDLEA---GGATVFPRVGARIIPERGSAAFWYNLKQSGQGDYSTRHAACPVLAGTKWVANKWIHEIGQEFRRPCGLSEM 466
BLAST of AGAP004611-PA vs. nr
Match: gi|347972274|ref|XP_001237637.3| (AGAP004611-PA [Anopheles gambiae str. PEST] >gi|333469330|gb|EAU76664.3| AGAP004611-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 98.9821 bits (245), Expect = 2.862e-22 Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79 M L A GGATV+P +G+ +FP+KGSA+FW+NL ++G D+ TLH ACPV +G KW+GNKWI Q R+C L P Sbjct: 434 MYYLSDVAIGGATVFPQLGLGVFPQKGSAIFWYNLHANGTVDHRTLHGACPVFVGSKWVGNKWIHERGQEFRRSCELDP 512
BLAST of AGAP004611-PA vs. nr
Match: gi|1218215910|ref|XP_011493297.2| (prolyl 4-hydroxylase subunit alpha-1 [Aedes aegypti]) HSP 1 Score: 98.9821 bits (245), Expect = 3.065e-22 Identity = 44/79 (55.70%), Postives = 51/79 (64.56%), Query Frame = 0 Query: 1 MTVLEAPAAGGATVWPYVGVSIFPEKGSAVFWFNLRSDGQPDYLTLHAACPVLLGQKWIGNKWIGYTPQWKNRACALKP 79 M L GGATV+P +GV +FP+KGSA+FW+NL DG D TLH ACPVLLG KW+ NKWI Q R C L P Sbjct: 436 MYYLSDVEQGGATVFPQIGVGVFPKKGSAIFWYNLLPDGTGDERTLHGACPVLLGSKWVANKWIHQYHQEFRRPCDLHP 514 The following BLAST results are available for this feature:
BLAST of AGAP004611-PA vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 8
BLAST of AGAP004611-PA vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 24
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BLAST of AGAP004611-PA vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold287_size221780:31828..33868+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold287_size221780-snap-gene-0.21 ID=maker-scaffold287_size221780-snap-gene-0.21|Name=AGAP004611-PA|organism=Tigriopus kingsejongensis|type=gene|length=2041bp|location=Sequence derived from alignment at scaffold287_size221780:31828..33868+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'AGAP004611-PA' has the following synonyms
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