adp-ribosylation factor gtpase-activating protein 1, maker-scaffold292_size219010-snap-gene-1.46 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. L. salmonis genes
Match: EMLSAG00000000350 (supercontig:LSalAtl2s:LSalAtl2s104:877817:880136:-1 gene:EMLSAG00000000350 transcript:EMLSAT00000000350 description:"maker-LSalAtl2s104-snap-gene-8.22") HSP 1 Score: 80.4925 bits (197), Expect = 5.994e-19 Identity = 31/53 (58.49%), Postives = 42/53 (79.25%), Query Frame = 0
Query: 13 LRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMD 65
L+ + N CF+C ++NP W SVTYGI+IC++CSG HRSLGVH++FVRS +D
Sbjct: 16 LKSQSANKVCFDCGSNNPTWSSVTYGIFICIDCSGIHRSLGVHLTFVRSTVLD 68
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. L. salmonis genes
Match: EMLSAG00000009887 (supercontig:LSalAtl2s:LSalAtl2s643:209342:213124:-1 gene:EMLSAG00000009887 transcript:EMLSAT00000009887 description:"maker-LSalAtl2s643-augustus-gene-2.25") HSP 1 Score: 74.3294 bits (181), Expect = 1.072e-16 Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0
Query: 2 ASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH--SQRMLKSGISSILVPKSK 98
A K +R +L NN+C +C +P+W S+ GI +C+ECSG HRSLGVH+S VRS+ +D L ++ G+ S R+ ++ + I+ P++K
Sbjct: 393 AVRKVKRTAGQLLQIPGNNRCCDCGAFDPKWASINLGITLCIECSGVHRSLGVHVSKVRSIELDGWEPEILKVMTEIGNNLSNRIYEAKVEEIIAPRAK 491
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. L. salmonis genes
Match: EMLSAG00000002121 (supercontig:LSalAtl2s:LSalAtl2s139:1066244:1170379:-1 gene:EMLSAG00000002121 transcript:EMLSAT00000002121 description:"maker-LSalAtl2s139-augustus-gene-11.8") HSP 1 Score: 62.3882 bits (150), Expect = 1.592e-12 Identity = 25/63 (39.68%), Postives = 41/63 (65.08%), Query Frame = 0
Query: 19 NNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGHS 81
N+KC +C + +P W S+ G+ +C+ECSG HR LG H+S VRS+ +D+ L ++ G++
Sbjct: 605 NHKCVDCDSSSPLWASINLGVLMCIECSGVHRKLGSHISRVRSLDLDEWPPGHLAVMLSTGNA 667
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. SwissProt
Match: gi|81880083|sp|Q99K28.1|ARFG2_MOUSE (RecName: Full=ADP-ribosylation factor GTPase-activating protein 2; Short=ARF GAP 2; AltName: Full=GTPase-activating protein ZNF289; AltName: Full=Zinc finger protein 289) HSP 1 Score: 76.6406 bits (187), Expect = 4.824e-16 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 0
Query: 13 LRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMD 65
LR N CF+C +P W S+TYG+++C++CSG HRSLGVH+SF+RS +D
Sbjct: 17 LRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELD 69
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. SwissProt
Match: gi|123780788|sp|Q3MID3.1|ARFG2_RAT (RecName: Full=ADP-ribosylation factor GTPase-activating protein 2; Short=ARF GAP 2; AltName: Full=GTPase-activating protein ZNF289; AltName: Full=Zinc finger protein 289) HSP 1 Score: 76.6406 bits (187), Expect = 5.113e-16 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 0
Query: 13 LRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMD 65
LR N CF+C +P W S+TYG+++C++CSG HRSLGVH+SF+RS +D
Sbjct: 17 LRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELD 69
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. SwissProt
Match: gi|123782071|sp|Q4KLN7.1|ARFG3_RAT (RecName: Full=ADP-ribosylation factor GTPase-activating protein 3; Short=ARF GAP 3) HSP 1 Score: 76.6406 bits (187), Expect = 5.176e-16 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 0
Query: 13 LRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMD 65
LR N CF+C NP W S++YG+++C++CSG HRSLGVH+SF+RS +D
Sbjct: 16 LRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELD 68
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. SwissProt
Match: gi|75262642|sp|Q9FL69.1|AGD5_ARATH (RecName: Full=Probable ADP-ribosylation factor GTPase-activating protein AGD5; Short=ARF GAP AGD5; AltName: Full=Protein ARF-GAP DOMAIN 5; Short=AtAGD5; AltName: Full=Protein ZIGA3) HSP 1 Score: 74.3294 bits (181), Expect = 2.521e-15 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0
Query: 5 KTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMD 65
+ R+ L L EN +C +C+T P+W SV GI+IC++CSG HRSLGVH+S VRS T+D
Sbjct: 14 RHRKILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLD 74
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. SwissProt
Match: gi|21431921|sp|Q09531.2|YQP4_CAEEL (RecName: Full=Uncharacterized protein F07F6.4) HSP 1 Score: 74.3294 bits (181), Expect = 3.428e-15 Identity = 27/57 (47.37%), Postives = 41/57 (71.93%), Query Frame = 0
Query: 9 ALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMD 65
A+ ++R N CF+C NP W +VTYG+++C++CS HR+LGVH++FVRS +D
Sbjct: 15 AMRKMRALPPNKLCFDCGARNPTWCTVTYGVFLCIDCSAVHRNLGVHLTFVRSTNLD 71
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|1070591844|ref|XP_018392886.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X3 [Cyphomyrmex costatus]) HSP 1 Score: 144.436 bits (363), Expect = 4.823e-39 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASPKTRR LSEL+PKDENNKCFEC +HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRS++MDK + VEL + + G+
Sbjct: 1 MASPKTRRVLSELKPKDENNKCFECDSHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSISMDKWKDVELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|1070591840|ref|XP_018392884.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [Cyphomyrmex costatus]) HSP 1 Score: 144.436 bits (363), Expect = 7.935e-39 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASPKTRR LSEL+PKDENNKCFEC +HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRS++MDK + VEL + + G+
Sbjct: 1 MASPKTRRVLSELKPKDENNKCFECDSHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSISMDKWKDVELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|1070591842|ref|XP_018392885.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X2 [Cyphomyrmex costatus]) HSP 1 Score: 144.436 bits (363), Expect = 8.062e-39 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASPKTRR LSEL+PKDENNKCFEC +HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRS++MDK + VEL + + G+
Sbjct: 1 MASPKTRRVLSELKPKDENNKCFECDSHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSISMDKWKDVELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|1070206844|ref|XP_018372400.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X2 [Trachymyrmex cornetzi]) HSP 1 Score: 143.665 bits (361), Expect = 1.307e-38 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASP+TRR LSEL+PKDENNKCFEC +HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRSV+MDK + VEL + + G+
Sbjct: 1 MASPRTRRVLSELKPKDENNKCFECGSHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVSMDKWKDVELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|1069666690|ref|XP_018308799.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X2 [Trachymyrmex zeteki]) HSP 1 Score: 143.28 bits (360), Expect = 1.453e-38 Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASP+TRR LSEL+PKDENNKCFEC HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRSV+MDK + VEL + + G+
Sbjct: 1 MASPRTRRVLSELKPKDENNKCFECGNHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVSMDKWKDVELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|1070157332|ref|XP_018341644.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X2 [Trachymyrmex septentrionalis]) HSP 1 Score: 143.28 bits (360), Expect = 1.549e-38 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASP+TRR LSEL+PKDENNKCFEC +HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRSV+MDK + VEL + + G+
Sbjct: 1 MASPRTRRVLSELKPKDENNKCFECGSHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVSMDKWKDVELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|1009354032|gb|KYM79397.1| (ADP-ribosylation factor GTPase-activating protein 1 [Atta colombica]) HSP 1 Score: 143.665 bits (361), Expect = 1.660e-38 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASP+TRR LSEL+PKDENNKCFEC +HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRSV+MDK + VEL + + G+
Sbjct: 1 MASPRTRRVLSELKPKDENNKCFECGSHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVSMDKWKDVELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|746845629|ref|XP_011053108.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X2 [Acromyrmex echinatior]) HSP 1 Score: 143.28 bits (360), Expect = 1.759e-38 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASP+TRR LSEL+PKDENNKCFEC +HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRSV+MDK + VEL + + G+
Sbjct: 1 MASPRTRRVLSELKPKDENNKCFECGSHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVSMDKWKDVELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|1060234391|ref|XP_017842418.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X3 [Drosophila busckii]) HSP 1 Score: 140.969 bits (354), Expect = 1.760e-38 Identity = 60/80 (75.00%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASP+TRR L EL+P+DEN+KCFEC THNPQWVSVTYGIWICLECSG+HRSLGVH+SFVRSVTMDK + +EL + + G+
Sbjct: 1 MASPRTRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKDIELEKMKVGGN 80
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Match: gi|801396468|ref|XP_012058588.1| (PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 [Atta cephalotes]) HSP 1 Score: 143.665 bits (361), Expect = 1.831e-38 Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 0
Query: 1 MASPKTRRALSELRPKDENNKCFECQTHNPQWVSVTYGIWICLECSGQHRSLGVHMSFVRSVTMDKIRYVELILLFIQGH 80
MASP+TRR LSEL+PKDENNKCFEC +HNPQWVSVTYGIWICLECSG+HR LGVH+SFVRSV+MDK + VEL + + G+
Sbjct: 1 MASPRTRRVLSELKPKDENNKCFECGSHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVSMDKWKDVELEKMKVGGN 80 The following BLAST results are available for this feature:
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of adp-ribosylation factor gtpase-activating protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold292_size219010:214065..216234- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold292_size219010-snap-gene-1.46 ID=maker-scaffold292_size219010-snap-gene-1.46|Name=adp-ribosylation factor gtpase-activating protein 1|organism=Tigriopus kingsejongensis|type=gene|length=2170bp|location=Sequence derived from alignment at scaffold292_size219010:214065..216234- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'adp-ribosylation factor gtpase-activating protein 1' has the following synonyms
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